View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18317_low_95 (Length: 258)
Name: NF18317_low_95
Description: NF18317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18317_low_95 |
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Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 39077931 - 39078170
Alignment:
| Q |
1 |
tttgtataggaattggtaaaatactcttttctattttcttttctcttatacgtatatatcttttcatttctcattccgtaatcttcaagcttgttatagt |
100 |
Q |
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| T |
39077931 |
tttgtataggaattggtaaaatactcttttctattttcttttctctcatacgtatatatcttttcatttttcattccgtaatcttcaagctttttatagt |
39078030 |
T |
|
| Q |
101 |
aataaaatgtaaaccagtcttaaaaaatatataccttgaaaagttaaacttcaagtttgtaatatatacccttaattgaagtttacagtacaaaccataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39078031 |
aataaaatgtaaaccagtcttaaaaaatatataccttgaaaagttaaacttcaagtctgtaatatatacccttaattgaagtttacagtacaaaccataa |
39078130 |
T |
|
| Q |
201 |
actttaaattacgatattctcttattttatcatacattct |
240 |
Q |
| |
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||||||||||||||||||||||||||||||| |||||||| |
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| T |
39078131 |
actttaaattacgatattctcttattttatcgtacattct |
39078170 |
T |
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