View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18318_high_24 (Length: 309)
Name: NF18318_high_24
Description: NF18318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18318_high_24 |
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Alignment Details
Target: chr6 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 20567352 - 20567636
Alignment:
| Q |
1 |
tatgtccaaattgtaaaacagcgtatcattttcggccgtataatacatcaccattacaaggtacatttgttgaaattggtagagtgagtaataataatgg |
100 |
Q |
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|||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20567352 |
tatgtccaaattgtaaaacagcatatcattttcgaccgtataatacatcaccattgcaaggtacatttgttgaaattggtagagtgagtaataataatgg |
20567451 |
T |
|
| Q |
101 |
tggtagtagtaaaactcaattatctagaaggtttaaaaatggtattgggaaagatagtaatagtattaagagtggtcatcatggaagtgaggatttaggt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20567452 |
tggtagtagtaaaactcaattatctagaaggtttaaaaatggtattgggaaagatagtaatagtattaagagtggtcatcatggaagtgaggatttaggt |
20567551 |
T |
|
| Q |
201 |
ctaaatggtaatgctagtaattggcttgaagtgtcaatgtgggaaactttgagaaattacaatggtggtagtggaaatgctgctg |
285 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20567552 |
ctaaatggtagtgctagtaattggcttgaagtgtcaatgtgggaaactttgagaaattacaatggtggtagtggaaatgctgctg |
20567636 |
T |
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