View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18318_low_37 (Length: 216)
Name: NF18318_low_37
Description: NF18318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18318_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 13385070 - 13384883
Alignment:
| Q |
13 |
gagagaagaaactgttctggatttagcaaaatttgttgataaaggagttcaagtcaagcttactggtggcagacaaggtatataaacaacccaccnnnnn |
112 |
Q |
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| T |
13385070 |
gagaaaagaaactgttctggatttagcaaaatttgttgataaaggagttcaagtcaagcttactggtggcagacaaggtatataaacaacccaccttttt |
13384971 |
T |
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| Q |
113 |
nnnnnnnnnnnnatacgtttcttcttatcattaaattgattctggcgtaaataatttatgttcggatacattcatgtaaagagggttg |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13384970 |
cttttttattttatacgtttattcttatcattaaattgattctggcgtaaataatttatgttcggatacattcatgtaaagagggttg |
13384883 |
T |
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