View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18320_low_11 (Length: 441)
Name: NF18320_low_11
Description: NF18320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18320_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 115 - 436
Target Start/End: Original strand, 25133865 - 25134186
Alignment:
| Q |
115 |
ccctataatctcgtttgatcgattgnnnnnnncaccagacctttgatttgcaccattttttataagagttaatgttacacaaaaggccttgcgttcaatt |
214 |
Q |
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| T |
25133865 |
ccctataatctcgtttgatcgattgaaaaaaacaccagacctttgatttgcaccatatttgataagagttaatgttacacaaaaggccttgcgttcaatt |
25133964 |
T |
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| Q |
215 |
aaatggtgtttgagtagtgataattctggaccggagtgttctgagtgtcagaaagttggtatttgatgcaatgcaagtgttattataatattttgtttat |
314 |
Q |
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| T |
25133965 |
aaatggtgtttgagtagtgataattctggaccggagtgttctgagtgtcagaaagttggtatttgatgcaatgcaagtgttattataatattttgtttat |
25134064 |
T |
|
| Q |
315 |
atttctcatcagagtcagttctttttaaccttacatgattctaacaggcttataaacttgtaacgcaaagtgttaattattttcatcatcattgatcatc |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25134065 |
atttctcatcagagtcagttctttttaaccttacatgattctaacaggcttataaacttgtaacgcaaagtgttaattattttcatcatcattgatcatc |
25134164 |
T |
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| Q |
415 |
cttagttatgtcctttgcttct |
436 |
Q |
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||||||||||||||||| |||| |
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| T |
25134165 |
cttagttatgtcctttgtttct |
25134186 |
T |
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