View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18320_low_18 (Length: 401)

Name: NF18320_low_18
Description: NF18320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18320_low_18
NF18320_low_18
[»] chr1 (83 HSPs)
chr1 (10-157)||(22781159-22781310)
chr1 (284-385)||(398780-398881)
chr1 (223-285)||(22781034-22781096)
chr1 (285-386)||(42359463-42359564)
chr1 (290-386)||(16297297-16297393)
chr1 (283-386)||(47989440-47989542)
chr1 (282-386)||(6612185-6612289)
chr1 (285-385)||(10577750-10577850)
chr1 (290-385)||(1486724-1486819)
chr1 (294-385)||(10572604-10572695)
chr1 (310-385)||(34298405-34298480)
chr1 (325-385)||(37598816-37598875)
chr1 (327-386)||(22881630-22881689)
chr1 (300-386)||(31015002-31015088)
chr1 (309-386)||(40917719-40917794)
chr1 (316-386)||(48450601-48450671)
chr1 (285-386)||(38078675-38078771)
chr1 (321-386)||(46348397-46348462)
chr1 (294-363)||(48040499-48040568)
chr1 (331-386)||(113289-113344)
chr1 (300-379)||(16812502-16812581)
chr1 (327-386)||(24577200-24577259)
chr1 (283-386)||(41877484-41877587)
chr1 (324-386)||(1815240-1815302)
chr1 (300-386)||(5927354-5927440)
chr1 (316-381)||(2896140-2896205)
chr1 (290-383)||(9103589-9103682)
chr1 (300-345)||(9630635-9630680)
chr1 (321-386)||(18556470-18556535)
chr1 (280-385)||(38503259-38503364)
chr1 (285-346)||(41597524-41597585)
chr1 (316-385)||(5944256-5944327)
chr1 (309-385)||(7918226-7918302)
chr1 (290-385)||(16927200-16927293)
chr1 (326-386)||(31672909-31672969)
chr1 (290-386)||(31694724-31694820)
chr1 (285-376)||(609482-609573)
chr1 (290-385)||(9709769-9709864)
chr1 (302-385)||(19562636-19562718)
chr1 (323-386)||(22515901-22515964)
chr1 (324-386)||(1705006-1705068)
chr1 (317-386)||(13011229-13011299)
chr1 (316-386)||(14359536-14359605)
chr1 (316-386)||(21378553-21378623)
chr1 (316-386)||(28273102-28273172)
chr1 (327-385)||(36878447-36878505)
chr1 (316-385)||(1262859-1262928)
chr1 (290-386)||(3490404-3490494)
chr1 (316-385)||(5376515-5376584)
chr1 (316-385)||(5898281-5898350)
chr1 (316-385)||(6427325-6427394)
chr1 (323-384)||(12443476-12443537)
chr1 (306-383)||(20157367-20157444)
chr1 (303-385)||(9033022-9033105)
chr1 (333-384)||(9828036-9828087)
chr1 (309-384)||(15323131-15323206)
chr1 (327-386)||(32461477-32461536)
chr1 (339-386)||(40258947-40258994)
chr1 (283-346)||(48548016-48548079)
chr1 (325-386)||(32434730-32434792)
chr1 (283-383)||(17831548-17831642)
chr1 (350-386)||(18337338-18337374)
chr1 (317-381)||(21366039-21366103)
chr1 (319-382)||(17754289-17754352)
chr1 (316-386)||(19058870-19058941)
chr1 (317-384)||(23636065-23636132)
chr1 (285-386)||(29144372-29144472)
chr1 (327-382)||(30359374-30359429)
chr1 (299-385)||(1864895-1864979)
chr1 (327-385)||(13997869-13997927)
chr1 (316-382)||(15641048-15641114)
chr1 (319-386)||(18471276-18471345)
chr1 (327-385)||(23622304-23622362)
chr1 (339-385)||(23738676-23738722)
chr1 (310-364)||(28663573-28663627)
chr1 (333-386)||(51410016-51410070)
chr1 (341-386)||(6332671-6332715)
chr1 (327-364)||(6427447-6427484)
chr1 (341-386)||(18190122-18190167)
chr1 (320-377)||(23705489-23705546)
chr1 (336-385)||(25361881-25361930)
chr1 (321-385)||(6415016-6415080)
chr1 (285-381)||(40285673-40285769)
[»] chr6 (66 HSPs)
chr6 (285-386)||(8776987-8777088)
chr6 (282-386)||(9107384-9107488)
chr6 (300-386)||(8365533-8365619)
chr6 (290-386)||(16766646-16766742)
chr6 (282-385)||(7938057-7938160)
chr6 (309-386)||(34595102-34595179)
chr6 (283-386)||(1681700-1681803)
chr6 (285-386)||(7977844-7977945)
chr6 (300-386)||(853873-853959)
chr6 (316-386)||(10770688-10770758)
chr6 (316-386)||(12696299-12696369)
chr6 (316-386)||(16833283-16833353)
chr6 (300-385)||(9658839-9658923)
chr6 (285-386)||(426528-426629)
chr6 (321-386)||(17841603-17841668)
chr6 (285-385)||(9027122-9027222)
chr6 (282-385)||(34290092-34290195)
chr6 (317-385)||(3398595-3398662)
chr6 (309-385)||(7740610-7740685)
chr6 (285-385)||(18367781-18367880)
chr6 (328-386)||(7801170-7801228)
chr6 (302-384)||(7930266-7930348)
chr6 (316-386)||(15489746-15489816)
chr6 (316-386)||(31959134-31959204)
chr6 (300-385)||(17341679-17341763)
chr6 (321-386)||(28152079-28152143)
chr6 (285-386)||(31384864-31384965)
chr6 (321-385)||(16388248-16388311)
chr6 (285-385)||(24115862-24115962)
chr6 (306-385)||(9629348-9629427)
chr6 (321-386)||(17302536-17302602)
chr6 (319-385)||(19044442-19044508)
chr6 (337-386)||(1191714-1191763)
chr6 (285-386)||(25096367-25096468)
chr6 (291-386)||(3209332-3209427)
chr6 (283-386)||(5970122-5970219)
chr6 (325-385)||(7265608-7265668)
chr6 (285-385)||(8805587-8805687)
chr6 (317-385)||(13851712-13851780)
chr6 (290-385)||(5732525-5732620)
chr6 (300-383)||(6389702-6389785)
chr6 (319-386)||(17435177-17435244)
chr6 (330-385)||(19040341-19040396)
chr6 (303-385)||(7996393-7996475)
chr6 (303-385)||(8022326-8022408)
chr6 (290-380)||(10339146-10339236)
chr6 (312-385)||(7086766-7086839)
chr6 (316-385)||(13360387-13360456)
chr6 (290-347)||(24353125-24353182)
chr6 (316-385)||(33001304-33001373)
chr6 (304-365)||(33303622-33303683)
chr6 (316-385)||(34073362-34073431)
chr6 (285-385)||(10294051-10294151)
chr6 (327-383)||(10842518-10842574)
chr6 (290-386)||(21395322-21395417)
chr6 (341-385)||(34225824-34225868)
chr6 (283-386)||(9522833-9522936)
chr6 (314-385)||(26562662-26562733)
chr6 (294-386)||(28715256-28715340)
chr6 (317-386)||(4877918-4877988)
chr6 (316-386)||(6898295-6898365)
chr6 (327-369)||(12868706-12868748)
chr6 (316-385)||(31579240-31579309)
chr6 (321-377)||(14796213-14796269)
chr6 (321-369)||(20371141-20371189)
chr6 (291-343)||(31673543-31673595)
[»] chr4 (55 HSPs)
chr4 (282-386)||(19482609-19482713)
chr4 (280-386)||(23293000-23293106)
chr4 (291-386)||(27706191-27706286)
chr4 (285-385)||(36635268-36635368)
chr4 (294-385)||(35158000-35158091)
chr4 (297-385)||(12895289-12895377)
chr4 (285-364)||(20633429-20633508)
chr4 (316-386)||(40481612-40481681)
chr4 (309-386)||(21945471-21945548)
chr4 (289-385)||(40179651-40179747)
chr4 (300-379)||(11651155-11651234)
chr4 (284-386)||(12708089-12708192)
chr4 (319-386)||(12797352-12797418)
chr4 (283-385)||(24343449-24343551)
chr4 (321-386)||(30298926-30298992)
chr4 (321-386)||(30327794-30327860)
chr4 (316-385)||(49431000-49431070)
chr4 (309-385)||(5414187-5414263)
chr4 (303-386)||(28084483-28084567)
chr4 (309-376)||(20521873-20521940)
chr4 (316-386)||(3947780-3947850)
chr4 (324-386)||(4383351-4383412)
chr4 (336-385)||(54580038-54580087)
chr4 (285-385)||(903866-903966)
chr4 (285-337)||(4157102-4157154)
chr4 (285-385)||(10499285-10499383)
chr4 (321-385)||(13783261-13783325)
chr4 (327-386)||(11596366-11596425)
chr4 (327-385)||(15029751-15029809)
chr4 (321-386)||(6485625-6485690)
chr4 (321-386)||(12895130-12895194)
chr4 (316-385)||(14126126-14126195)
chr4 (321-386)||(14465089-14465154)
chr4 (290-386)||(847900-847996)
chr4 (317-385)||(2361990-2362058)
chr4 (350-386)||(28964262-28964298)
chr4 (350-386)||(29205453-29205489)
chr4 (300-386)||(752947-753033)
chr4 (314-385)||(22440615-22440686)
chr4 (316-363)||(28720851-28720898)
chr4 (314-380)||(7012039-7012105)
chr4 (316-386)||(16303280-16303350)
chr4 (327-365)||(24543967-24544005)
chr4 (351-385)||(24999054-24999088)
chr4 (324-384)||(22234906-22234967)
chr4 (332-377)||(32273549-32273594)
chr4 (333-386)||(38847026-38847079)
chr4 (332-385)||(40613441-40613494)
chr4 (327-380)||(50280867-50280920)
chr4 (280-336)||(5111584-5111640)
chr4 (325-369)||(11110713-11110757)
chr4 (316-368)||(12628617-12628669)
chr4 (326-386)||(16073380-16073439)
chr4 (285-337)||(28470341-28470393)
chr4 (327-363)||(34306840-34306876)
[»] chr8 (60 HSPs)
chr8 (283-386)||(29510318-29510421)
chr8 (285-386)||(22651920-22652021)
chr8 (297-386)||(4673439-4673528)
chr8 (321-386)||(36450768-36450833)
chr8 (290-385)||(36934619-36934714)
chr8 (285-386)||(2572070-2572171)
chr8 (324-385)||(15816144-15816205)
chr8 (285-385)||(24362217-24362317)
chr8 (299-370)||(24196627-24196698)
chr8 (316-386)||(20873044-20873114)
chr8 (318-386)||(18170496-18170564)
chr8 (318-386)||(18634064-18634132)
chr8 (290-385)||(926803-926898)
chr8 (309-376)||(13436988-13437055)
chr8 (299-386)||(31556955-31557041)
chr8 (300-379)||(41838144-41838223)
chr8 (309-386)||(22197756-22197833)
chr8 (316-385)||(25192362-25192431)
chr8 (325-386)||(30271305-30271366)
chr8 (284-385)||(44067459-44067560)
chr8 (285-385)||(37283825-37283925)
chr8 (285-336)||(24413624-24413675)
chr8 (316-386)||(8343291-8343361)
chr8 (328-386)||(22595981-22596039)
chr8 (294-383)||(24857962-24858054)
chr8 (314-385)||(3677759-3677830)
chr8 (316-386)||(4298900-4298970)
chr8 (327-385)||(4786353-4786411)
chr8 (303-385)||(11927101-11927183)
chr8 (303-385)||(11944627-11944709)
chr8 (316-386)||(18407695-18407764)
chr8 (291-337)||(18964121-18964167)
chr8 (280-337)||(3951592-3951649)
chr8 (341-386)||(25566841-25566886)
chr8 (316-385)||(27213522-27213591)
chr8 (324-385)||(34897068-34897129)
chr8 (350-386)||(4948661-4948697)
chr8 (321-385)||(14134679-14134743)
chr8 (285-337)||(16642029-16642081)
chr8 (326-386)||(30077401-30077461)
chr8 (324-363)||(22204622-22204661)
chr8 (324-382)||(5813575-5813633)
chr8 (327-385)||(13844611-13844669)
chr8 (340-386)||(17468522-17468568)
chr8 (316-386)||(24669408-24669478)
chr8 (327-385)||(39954294-39954352)
chr8 (348-386)||(40332198-40332236)
chr8 (328-382)||(41831958-41832012)
chr8 (336-385)||(7658458-7658507)
chr8 (300-385)||(13203600-13203685)
chr8 (282-331)||(21465367-21465416)
chr8 (329-386)||(24613509-24613565)
chr8 (326-379)||(27101500-27101553)
chr8 (321-378)||(31109540-31109597)
chr8 (293-337)||(3454471-3454515)
chr8 (350-386)||(8342981-8343017)
chr8 (285-337)||(18069186-18069238)
chr8 (317-385)||(28385009-28385077)
chr8 (333-385)||(31236592-31236644)
chr8 (285-337)||(43737876-43737928)
[»] chr5 (56 HSPs)
chr5 (282-386)||(17177037-17177141)
chr5 (284-386)||(21522693-21522795)
chr5 (284-386)||(21533259-21533361)
chr5 (298-386)||(21191070-21191158)
chr5 (289-382)||(13287417-13287510)
chr5 (282-381)||(6770484-6770583)
chr5 (290-385)||(41995420-41995515)
chr5 (300-386)||(6247581-6247667)
chr5 (300-386)||(37328858-37328944)
chr5 (284-386)||(15382420-15382524)
chr5 (300-385)||(22013373-22013458)
chr5 (295-386)||(21541984-21542075)
chr5 (321-386)||(14674249-14674314)
chr5 (324-386)||(39698524-39698586)
chr5 (285-386)||(19579645-19579746)
chr5 (285-385)||(6401442-6401542)
chr5 (317-381)||(19552562-19552626)
chr5 (282-386)||(30183490-30183594)
chr5 (283-363)||(36642799-36642878)
chr5 (311-386)||(24906315-24906390)
chr5 (327-386)||(31084309-31084368)
chr5 (284-386)||(6326311-6326413)
chr5 (316-386)||(4105232-4105304)
chr5 (321-386)||(21576759-21576824)
chr5 (326-386)||(21351919-21351979)
chr5 (330-386)||(33178014-33178070)
chr5 (300-367)||(19820427-19820494)
chr5 (325-386)||(10298553-10298614)
chr5 (321-386)||(43001780-43001845)
chr5 (283-383)||(15410465-15410565)
chr5 (326-386)||(42893345-42893405)
chr5 (326-385)||(3966488-3966547)
chr5 (316-386)||(15405069-15405137)
chr5 (285-384)||(16304440-16304539)
chr5 (316-386)||(30135288-30135359)
chr5 (320-382)||(9449448-9449510)
chr5 (316-385)||(14422879-14422946)
chr5 (308-386)||(27932203-27932280)
chr5 (316-386)||(41633710-41633780)
chr5 (325-386)||(8420011-8420072)
chr5 (285-330)||(20683325-20683370)
chr5 (319-380)||(40000555-40000616)
chr5 (321-385)||(43564863-43564925)
chr5 (297-385)||(16203810-16203898)
chr5 (317-385)||(22423827-22423895)
chr5 (321-385)||(27144443-27144507)
chr5 (336-386)||(15883982-15884033)
chr5 (339-385)||(7677703-7677749)
chr5 (303-385)||(26312731-26312813)
chr5 (309-386)||(22299495-22299571)
chr5 (332-385)||(28588689-28588742)
chr5 (344-385)||(40131624-40131665)
chr5 (327-375)||(2436908-2436956)
chr5 (280-320)||(19490533-19490573)
chr5 (285-337)||(23016054-23016106)
chr5 (284-385)||(25888308-25888411)
[»] chr7 (56 HSPs)
chr7 (295-386)||(24339596-24339687)
chr7 (286-385)||(26733249-26733348)
chr7 (300-386)||(27945000-27945086)
chr7 (285-386)||(5409850-5409951)
chr7 (285-386)||(25481846-25481947)
chr7 (290-386)||(11061090-11061186)
chr7 (284-384)||(30730980-30731080)
chr7 (316-386)||(13770666-13770736)
chr7 (316-386)||(24105653-24105723)
chr7 (300-386)||(32094034-32094121)
chr7 (300-386)||(33994171-33994257)
chr7 (316-382)||(43027487-43027553)
chr7 (316-385)||(22868017-22868086)
chr7 (290-384)||(35861907-35862007)
chr7 (285-385)||(22602725-22602825)
chr7 (294-386)||(29763188-29763280)
chr7 (282-369)||(1433395-1433482)
chr7 (327-386)||(9408348-9408407)
chr7 (283-385)||(18213048-18213151)
chr7 (290-385)||(21140997-21141092)
chr7 (309-386)||(13557755-13557835)
chr7 (309-383)||(21826241-21826315)
chr7 (326-384)||(32308105-32308163)
chr7 (332-385)||(11665455-11665508)
chr7 (316-377)||(11722121-11722182)
chr7 (321-386)||(18215200-18215265)
chr7 (312-385)||(19206021-19206094)
chr7 (284-385)||(26329397-26329498)
chr7 (285-337)||(9778452-9778504)
chr7 (309-385)||(43249961-43250037)
chr7 (339-386)||(3991322-3991369)
chr7 (327-386)||(8234132-8234191)
chr7 (314-385)||(18013089-18013160)
chr7 (322-385)||(29787384-29787447)
chr7 (327-385)||(6630927-6630985)
chr7 (328-386)||(7438693-7438751)
chr7 (319-385)||(10042915-10042981)
chr7 (324-386)||(23191879-23191941)
chr7 (328-386)||(40287371-40287428)
chr7 (300-386)||(21864765-21864853)
chr7 (333-386)||(25822647-25822700)
chr7 (328-385)||(41020483-41020540)
chr7 (329-386)||(11272600-11272659)
chr7 (321-385)||(15680789-15680853)
chr7 (285-385)||(17851375-17851475)
chr7 (350-386)||(26033475-26033511)
chr7 (327-385)||(5835233-5835291)
chr7 (340-386)||(11831431-11831477)
chr7 (324-385)||(9482917-9482978)
chr7 (341-386)||(13300410-13300455)
chr7 (328-385)||(20549778-20549835)
chr7 (303-379)||(2425754-2425830)
chr7 (314-374)||(5307233-5307293)
chr7 (322-386)||(7197311-7197375)
chr7 (309-361)||(13585275-13585327)
chr7 (327-386)||(21560484-21560548)
[»] scaffold0053 (1 HSPs)
scaffold0053 (280-386)||(8737-8843)
[»] scaffold0027 (1 HSPs)
scaffold0027 (284-386)||(46625-46727)
[»] scaffold0652 (1 HSPs)
scaffold0652 (290-386)||(476-572)
[»] chr2 (51 HSPs)
chr2 (306-386)||(15972838-15972918)
chr2 (290-385)||(21616711-21616806)
chr2 (303-386)||(19536411-19536495)
chr2 (285-386)||(30335361-30335462)
chr2 (314-386)||(12940949-12941021)
chr2 (311-386)||(15657834-15657909)
chr2 (300-386)||(20539688-20539774)
chr2 (283-385)||(34784997-34785099)
chr2 (325-386)||(37419727-37419788)
chr2 (319-386)||(18421941-18422008)
chr2 (316-386)||(18841027-18841097)
chr2 (316-386)||(30404864-30404934)
chr2 (285-386)||(21374713-21374809)
chr2 (304-385)||(21782833-21782914)
chr2 (290-386)||(23058456-23058553)
chr2 (321-386)||(37558957-37559022)
chr2 (285-385)||(28412294-28412394)
chr2 (314-385)||(20242742-20242813)
chr2 (322-385)||(24894370-24894433)
chr2 (285-386)||(2438733-2438831)
chr2 (300-386)||(6940214-6940300)
chr2 (320-386)||(30717544-30717610)
chr2 (319-385)||(36756359-36756425)
chr2 (300-385)||(23717986-23718070)
chr2 (300-385)||(24105658-24105742)
chr2 (314-386)||(20473295-20473367)
chr2 (330-385)||(12668438-12668493)
chr2 (290-385)||(18276470-18276565)
chr2 (327-386)||(38117173-38117232)
chr2 (290-337)||(44860277-44860324)
chr2 (301-386)||(21624226-21624312)
chr2 (314-386)||(14996237-14996310)
chr2 (300-385)||(16069269-16069353)
chr2 (314-386)||(11223877-11223949)
chr2 (282-369)||(26769458-26769539)
chr2 (321-385)||(28677889-28677953)
chr2 (285-385)||(31283992-31284092)
chr2 (314-385)||(36409642-36409713)
chr2 (287-345)||(4142895-4142953)
chr2 (297-375)||(11670711-11670789)
chr2 (293-374)||(34337202-34337283)
chr2 (321-386)||(39323244-39323309)
chr2 (314-385)||(27286307-27286378)
chr2 (326-384)||(27460011-27460070)
chr2 (340-386)||(974746-974792)
chr2 (327-385)||(31808063-31808121)
chr2 (332-386)||(33153415-33153469)
chr2 (320-381)||(2331773-2331834)
chr2 (327-386)||(29367383-29367443)
chr2 (309-385)||(31018558-31018634)
chr2 (317-385)||(35449489-35449557)
[»] scaffold0223 (1 HSPs)
scaffold0223 (303-386)||(20134-20217)
[»] scaffold0018 (2 HSPs)
scaffold0018 (300-386)||(178832-178919)
scaffold0018 (314-386)||(192263-192335)
[»] chr3 (66 HSPs)
chr3 (285-382)||(10335304-10335401)
chr3 (285-386)||(15796308-15796409)
chr3 (290-382)||(16000034-16000126)
chr3 (303-386)||(55401037-55401120)
chr3 (283-375)||(750643-750736)
chr3 (285-382)||(3164043-3164140)
chr3 (309-386)||(28917969-28918046)
chr3 (303-386)||(8587035-8587118)
chr3 (327-386)||(20503451-20503510)
chr3 (283-386)||(35994752-35994854)
chr3 (321-383)||(10954932-10954994)
chr3 (316-386)||(26492219-26492289)
chr3 (314-386)||(14216865-14216937)
chr3 (314-386)||(14222994-14223066)
chr3 (327-387)||(21479104-21479164)
chr3 (283-386)||(7171444-7171546)
chr3 (328-386)||(4987305-4987363)
chr3 (284-385)||(24205056-24205157)
chr3 (300-385)||(25064868-25064953)
chr3 (333-386)||(34910309-34910362)
chr3 (309-386)||(41961664-41961741)
chr3 (316-384)||(14979156-14979224)
chr3 (319-386)||(10268500-10268567)
chr3 (285-386)||(14747511-14747607)
chr3 (316-386)||(26508085-26508155)
chr3 (316-385)||(8383232-8383301)
chr3 (333-386)||(14209105-14209158)
chr3 (285-385)||(11665888-11665988)
chr3 (285-385)||(25093446-25093546)
chr3 (321-385)||(25948902-25948966)
chr3 (283-386)||(4990981-4991084)
chr3 (316-382)||(2620071-2620137)
chr3 (324-386)||(28812499-28812560)
chr3 (320-385)||(11493376-11493441)
chr3 (306-367)||(12674534-12674595)
chr3 (309-386)||(14829658-14829734)
chr3 (324-385)||(18426932-18426993)
chr3 (327-376)||(40052318-40052367)
chr3 (310-386)||(3610602-3610678)
chr3 (321-369)||(3865587-3865635)
chr3 (316-384)||(9800015-9800083)
chr3 (321-369)||(10318065-10318113)
chr3 (285-385)||(23915903-23916003)
chr3 (300-383)||(14618740-14618823)
chr3 (327-386)||(34185137-34185196)
chr3 (300-386)||(11610480-11610566)
chr3 (316-385)||(14840306-14840375)
chr3 (300-385)||(16788971-16789056)
chr3 (326-386)||(25775493-25775554)
chr3 (333-385)||(12703999-12704051)
chr3 (285-337)||(14027959-14028011)
chr3 (321-385)||(29508424-29508488)
chr3 (285-385)||(34307795-34307895)
chr3 (350-385)||(7928459-7928494)
chr3 (323-386)||(14832081-14832144)
chr3 (321-384)||(21720744-21720807)
chr3 (310-381)||(25652050-25652121)
chr3 (328-386)||(21257000-21257058)
chr3 (341-386)||(1509539-1509584)
chr3 (316-385)||(5441046-5441115)
chr3 (324-385)||(23870574-23870635)
chr3 (324-385)||(29112295-29112356)
chr3 (333-386)||(49651800-49651853)
chr3 (341-382)||(51206371-51206412)
chr3 (290-382)||(4469799-4469891)
chr3 (285-381)||(38731162-38731258)
[»] scaffold0306 (1 HSPs)
scaffold0306 (300-386)||(13359-13445)
[»] scaffold0152 (1 HSPs)
scaffold0152 (300-386)||(21882-21968)
[»] scaffold0103 (1 HSPs)
scaffold0103 (321-386)||(51791-51856)
[»] scaffold0021 (1 HSPs)
scaffold0021 (285-386)||(130426-130527)
[»] scaffold0003 (1 HSPs)
scaffold0003 (309-385)||(241562-241638)
[»] scaffold0116 (1 HSPs)
scaffold0116 (282-385)||(9839-9942)
[»] scaffold0246 (1 HSPs)
scaffold0246 (316-386)||(19551-19620)
[»] scaffold0361 (1 HSPs)
scaffold0361 (333-386)||(14522-14575)
[»] scaffold0007 (1 HSPs)
scaffold0007 (309-385)||(225283-225359)
[»] scaffold0019 (1 HSPs)
scaffold0019 (327-387)||(71709-71771)
[»] scaffold0136 (1 HSPs)
scaffold0136 (285-386)||(3863-3969)
[»] scaffold0004 (1 HSPs)
scaffold0004 (324-386)||(92790-92852)
[»] scaffold0171 (1 HSPs)
scaffold0171 (316-385)||(23395-23464)
[»] scaffold0066 (1 HSPs)
scaffold0066 (333-386)||(33377-33430)
[»] scaffold0011 (1 HSPs)
scaffold0011 (325-386)||(17763-17824)
[»] scaffold0227 (2 HSPs)
scaffold0227 (333-385)||(7326-7378)
scaffold0227 (294-338)||(15008-15052)
[»] scaffold0122 (2 HSPs)
scaffold0122 (333-385)||(8002-8054)
scaffold0122 (309-385)||(8634-8710)
[»] scaffold0450 (1 HSPs)
scaffold0450 (328-386)||(8649-8707)
[»] scaffold0022 (1 HSPs)
scaffold0022 (316-385)||(90818-90887)
[»] scaffold0168 (1 HSPs)
scaffold0168 (309-369)||(21011-21071)
[»] scaffold0008 (1 HSPs)
scaffold0008 (297-385)||(263387-263475)
[»] scaffold1528 (1 HSPs)
scaffold1528 (319-382)||(1013-1076)
[»] scaffold0793 (1 HSPs)
scaffold0793 (300-386)||(4897-4983)
[»] scaffold0722 (1 HSPs)
scaffold0722 (324-386)||(7046-7108)
[»] scaffold0044 (1 HSPs)
scaffold0044 (331-385)||(53170-53224)
[»] scaffold0020 (1 HSPs)
scaffold0020 (300-381)||(137739-137820)
[»] scaffold0311 (1 HSPs)
scaffold0311 (318-362)||(10509-10553)


Alignment Details
Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 10 - 157
Target Start/End: Complemental strand, 22781310 - 22781159
Alignment:
Q  10 attattctactaacaataatagtcctttatgaaatgcattttaaccaaatcagttttcagtttcaattctgagatttga----gtttcaattatacatta 105  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    |||||||||||| ||||    
T  22781310 attattctaccaacaataataatcctttatgaaatgcattttaaccaaatcagttttcagtttcaattctcagatttgattgagtttcaattataaatta 22781211  T
Q  106 agtttctgtttttacttttgagtcaagtcactctatttacttcaccccacta 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22781210 agtttctgtttttacttttgagtcaagtcactctatttacttcaccccacta 22781159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 284 - 385
Target Start/End: Complemental strand, 398881 - 398780
Alignment:
Q  284 cctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||| |||||||||||||||  | |||||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||| |||||||||||||    
T  398881 cctatgaagcacggatacggacgcggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaat 398782  T
Q  384 ta 385  Q
    ||    
T  398781 ta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 22781096 - 22781034
Alignment:
Q  223 gtcaaaggaaggtttgcaaagtagagaagggaaaattgacataccgtagacacattaagaacc 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22781096 gtcaaaggaaggtttgcaaagtagagaagggaaaattgacataccgtagacacattaagaacc 22781034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 42359564 - 42359463
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||||||||||| ||  |||||  |||| |||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  42359564 ctatgaagcacggatacggacacgaacaccgtacacaacacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaatt 42359465  T
Q  385 ac 386  Q
    ||    
T  42359464 ac 42359463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 16297393 - 16297297
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||| |  |||| | ||||||| ||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  16297393 aagcacggatacggacatggacatcggacacgatacggatactgacacgtcgacacagcaaataatatgaaaaaatcacaaaattcagtgtaattac 16297297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 386
Target Start/End: Original strand, 47989440 - 47989542
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| ||||| |||||| || || || |||||||||||||| |||||||||||||||||||||  |||||||| ||||||||||| ||||||||||||    
T  47989440 acctatgaagcatggatacagacacggataccagacacgacacagacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaa 47989538  T
Q  383 ttac 386  Q
    ||||    
T  47989539 ttac 47989542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 6612289 - 6612185
Alignment:
Q  282 aacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    ||||||| |||||| |||||||| ||  ||||| ||||||||||||||| ||||||||||| |||   |||||||||||||||| ||| |||||||||||    
T  6612289 aacctatgaagcacagatacggacacgaacaccggacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgta 6612190  T
Q  382 attac 386  Q
    |||||    
T  6612189 attac 6612185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 10577850 - 10577750
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||||||||||| || |||||| |||||||||||||||| |||||||||||||| | |||  ||| | ||||||||||||| ||||||||||    
T  10577850 ctatgaagcacggatacggacacggacaccggacacgacacggacaccgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaatt 10577751  T
Q  385 a 385  Q
    |    
T  10577750 a 10577750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 385
Target Start/End: Complemental strand, 1486819 - 1486724
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| ||||||||| || || ||| || |||||||||| |||||||||| |||||| | |||||||||||||||||||| |||||||||||||||    
T  1486819 aagcatggatacggacacggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 1486724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 385
Target Start/End: Complemental strand, 10572695 - 10572604
Alignment:
Q  294 acggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| |||||||| |||||| ||||||||| | |||||||||||||||||| || |||||||||| ||||||||| ||||| |||||||||    
T  10572695 acggacacggatacggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaatta 10572604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 385
Target Start/End: Original strand, 34298405 - 34298480
Alignment:
Q  310 acaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||||||| |||||||| ||||||| || |||||||||| ||||||||| |||||||||||||||    
T  34298405 acaccagacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaatta 34298480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 385
Target Start/End: Original strand, 37598816 - 37598875
Alignment:
Q  325 cggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  37598816 cggacactgacacgccgacacaactaataatttgaaaaaatcac-aaattcagtgtaatta 37598875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 22881689 - 22881630
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattac 22881630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 386
Target Start/End: Original strand, 31015002 - 31015088
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| ||||||||| | |||||||||| ||||||| |||| ||||| | |||||||||| ||||||||| ||||||||||||||||    
T  31015002 acggacacagacaccgggcacgacacgggcactgacgcgcctacacagctaataatttgagaaaatcacataattcagtgtaattac 31015088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 40917719 - 40917794
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| ||||||||||||| ||||||||||||||||| | |||||||||||||||||||  |||| |||||||||||    
T  40917719 gacaccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaatcac--aattaagtgtaattac 40917794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 48450671 - 48450601
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||||| ||||| | |||||||||||||||| ||| |||| |||||||||||    
T  48450671 gacacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattac 48450601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 38078771 - 38078675
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||||||||||| || |||||| |||||||     ||||||||||| ||||||| | |||||||||||||||||||| |||||| |||||||    
T  38078771 ctatgaagcacggatacggacacggacaccggacacga-----acactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaatt 38078677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 46348462 - 46348397
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||||||| | |||||||||||||||||| | |||| |||||||||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattac 46348397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 363
Target Start/End: Complemental strand, 48040568 - 48040499
Alignment:
Q  294 acggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaa 363  Q
    ||||||| |||||| |||||| |||||||||||||||||||||||||||||||   ||||||||||||||    
T  48040568 acggatatggatacggacaccggacacgacacggacactgacacgccgacacagataataatttgaaaaa 48040499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 386
Target Start/End: Original strand, 113289 - 113344
Alignment:
Q  331 ctgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattac 113344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 379
Target Start/End: Original strand, 16812502 - 16812581
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtg 379  Q
    |||||||||||||| | ||| ||||||||||||||||| ||||||| |  |||||||||| ||||||||| |||||||||    
T  16812502 acggatacagacactaaacatgacacggacactgacacaccgacaccaataataatttgacaaaatcacataattcagtg 16812581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 24577259 - 24577200
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| ||||||| |||||||| |||||||||||||||||||| ||||||||||||||||    
T  24577259 gacacggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattac 24577200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 386
Target Start/End: Complemental strand, 41877587 - 41877484
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| ||||||||||||||| |  || |||||||||||||| |||||||  ||||||||||  | |||||||||| ||||| ||| |||| |||||||    
T  41877587 acctatgaagcacggatacggacatggataccagacacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaa 41877488  T
Q  383 ttac 386  Q
    ||||    
T  41877487 ttac 41877484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 1815240 - 1815302
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||||  ||| |||| ||||||||||| ||||||||||||||||    
T  1815240 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattac 1815302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 300 - 386
Target Start/End: Complemental strand, 5927440 - 5927354
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| |||||| ||||||||||||||||||||||||  ||||  | |||||||||||||||||| | |||| | |||||||||    
T  5927440 acggatacggacaccggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatttaatgtaattac 5927354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 2896205 - 2896140
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    ||||| ||||||||||||||||||||||||  | |||||||||| ||||||||| |||||||||||    
T  2896205 gacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 383
Target Start/End: Original strand, 9103589 - 9103682
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||||||||| ||| ||  ||||| |||| ||| ||||||||||||||||||||||   |||||||||||||||||||| |||| ||| ||||    
T  9103589 aagcacggatatggacacgaacacctgacaggactcggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaat 9103682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 9630680 - 9630635
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacac 345  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9630680 acggatacagacaccagacacaacacggacactgacacgccgacac 9630635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 18556535 - 18556470
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||||||| | ||||||||||||| |||||| |||| | |||||||||    
T  18556535 gacacggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattac 18556470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 38503259 - 38503364
Alignment:
Q  280 agaacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtg 379  Q
    ||||||||| | ||||||||||||| || |||||  |||| |||||||||||| |||| |||||||  | |||||||||| ||||||| | | |||||||    
T  38503259 agaacctatgatgcacggatacggacacggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtg 38503358  T
Q  380 taatta 385  Q
    ||||||    
T  38503359 taatta 38503364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 41597585 - 41597524
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacaca 346  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||| |||||||| |||||    
T  41597585 ctatgaagcacggatacggatacggacaccaaacacgacacggacaccgacacgccaacaca 41597524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 5944256 - 5944327
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttg--aaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||| ||||||||||||||| |||| | |||||||||  ||||||||||| |||||||||||||||    
T  5944256 gacacgacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaatta 5944327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 385
Target Start/End: Complemental strand, 7918302 - 7918226
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||| |||||||||| |||| |||||||| ||||  || |||||||||| ||||||||| |||||||||||||||    
T  7918302 gacaccggacacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaatta 7918226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 385
Target Start/End: Complemental strand, 16927293 - 16927200
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||  | ||||||| || ||||||||| |||||||||||| || || | | |||||||||||||||||| | |||||||||||||||    
T  16927293 aagcacggatac--acacagacatcaaacacgacacagacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaatta 16927200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 31672969 - 31672909
Alignment:
Q  326 ggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||| |||||||| | |||||||||||||||||||  ||||||||||||||||    
T  31672969 ggacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattac 31672909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 31694820 - 31694724
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttg--aaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||| |||||| |||||||||  |||||||| ||| ||||| | | |||||||||  ||||||||||| |||||||| |||||||    
T  31694820 aagcacggatacggatacggacaccggacacgaca--gacactgatacgtcgacatagctaataatttgaaaaaaaatcacataattcagtataattac 31694724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 376
Target Start/End: Complemental strand, 609573 - 609482
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattca 376  Q
    |||| ||||||| ||||||| ||||||| | |||||||||   |||||||||||||||||| || |||||||||| ||||| ||| ||||||    
T  609573 ctatgaagcacgtatacggacacagacatcggacacgacatcaacactgacacgccgacaccactaataatttgagaaaattacataattca 609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 385
Target Start/End: Original strand, 9709769 - 9709864
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||| || |  |||| ||||||||||||||||||||||| ||| ||||  | |||||||||| ||||||||| |||||  ||||||||    
T  9709769 aagcacggatacagacatggacatcagacacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaatta 9709864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 19562718 - 19562636
Alignment:
Q  302 ggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||| ||||| ||||| ||||||||||||||||||  | |||||||||| |||||| || | |||||||||||||    
T  19562718 ggatacagacaccggacac-acacgaacactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaatta 19562636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 386
Target Start/End: Complemental strand, 22515964 - 22515901
Alignment:
Q  323 cacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||| ||||||| |||||| | |||||||||||||||||||| |||| |||||||||||    
T  22515964 cacggacacggacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattac 22515901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 1705068 - 1705006
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| ||||| |||||||| | |||||||||||||||||||| ||||||| ||||||||    
T  1705068 acggacaccgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaattac 1705006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 386
Target Start/End: Complemental strand, 13011299 - 13011229
Alignment:
Q  317 acacgacacggacactgacacgccgacacaacaaataatttgaa-aaaatcacaaaattcagtgtaattac 386  Q
    |||||||||| ||||||||| ||||||||| | ||||||||||| ||||||||| |||| |||||||||||    
T  13011299 acacgacacgaacactgacatgccgacacagctaataatttgaaaaaaatcacataattaagtgtaattac 13011229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 14359605 - 14359536
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||| ||||| |||||||||||||| | |||||||||| ||||||||| |||| |||||||||||    
T  14359605 gacacgacacagacacggacacgccgacacagctaataatttga-aaaatcacataatttagtgtaattac 14359536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 21378553 - 21378623
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||  ||||| |||||||| | ||||| |||||||||| ||| ||||||||||||||||    
T  21378553 gacacgacacggacatggacacaccgacacagctaataaattgaaaaaattacataattcagtgtaattac 21378623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 28273172 - 28273102
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| |||| ||||||||||| || |||||||| ||| |||||||||||||| | ||||||||||||||||    
T  28273172 gacatgacaaggacactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaattac 28273102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 36878447 - 36878505
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||||||  | |||||||||| ||||||||| |||||||||||||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatta 36878505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 1262859 - 1262928
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||| |||| |||||||||||||| | |||||||||| ||||||||| |||||| | ||||||    
T  1262859 gacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcacataattcaatataatta 1262928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 3490494 - 3490404
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||||| |||||      |||||||||||||||||||  | |||||||||| ||||  |||  |||||||||||||||    
T  3490494 aagcacggatacggatacagacaccggacac------gacactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaattac 3490404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 5376584 - 5376515
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||||| ||||||||||||  | |||||||| | ||||| ||| |||||||||||||||    
T  5376584 gacacgacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaatta 5376515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 5898350 - 5898281
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||| ||||| |||||||| ||||||||||  | |||||| ||||||||||||| |||||||||||||||    
T  5898350 gacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaatta 5898281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 6427325 - 6427394
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||| |||||||||||||||||| ||||  | |||||||||| ||||||||| |||||| ||||||||    
T  6427325 gacacggcacggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaatta 6427394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 384
Target Start/End: Complemental strand, 12443537 - 12443476
Alignment:
Q  323 cacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||||| || |||||||||||||| | |||||||||| ||||||||| ||||||||||||||    
T  12443537 cacggatacggacacgccgacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 383
Target Start/End: Complemental strand, 20157444 - 20157367
Alignment:
Q  306 acagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||||||| |||||||||||| |||||||||  ||||||  | |||||| ||| ||||||||| |||||||||||||    
T  20157444 acagacaccggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaat 20157367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 385
Target Start/End: Complemental strand, 9033105 - 9033022
Alignment:
Q  303 gatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttg-aaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||  || ||  |||||||||||||||| | |||| || ||||||||| ||||||||||| |||||||||||||||    
T  9033105 gatacagacactggatacatcacggacactgacacgtcaacaccactaataatttgaaaaaaatcacataattcagtgtaatta 9033022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 9828036 - 9828087
Alignment:
Q  333 gacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    ||||||||||||| || |||||||||| ||||||||| ||||||||||||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcacataattcagtgtaatt 9828087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 384
Target Start/End: Original strand, 15323131 - 15323206
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||||| ||||||||| ||||||||||| | ||| |||   |||||||||||||||||||| |||| |||||||||    
T  15323131 gacaccggacacgacatggacactgacatgtcgatacagttaataatttgaaaaaatcacataatttagtgtaatt 15323206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 32461536 - 32461477
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| |||||||||| |||||| |||||||||||||||||||| |||| | |||||||||    
T  32461536 gacagtgacacgccggcacaactaataatttgaaaaaatcacataatttaatgtaattac 32461477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 386
Target Start/End: Complemental strand, 40258994 - 40258947
Alignment:
Q  339 ccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||||    
T  40258994 ccgacacaattaataatttgaaaaaatcacataattcagtgtaattac 40258947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 48548079 - 48548016
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacaca 346  Q
    |||||| ||||||||||||||| || |||||| ||||| | ||||||| |||||||||||||||    
T  48548079 acctatgaagcacggatacggacacggacaccggacacaatacggacaatgacacgccgacaca 48548016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 32434792 - 32434730
Alignment:
Q  325 cggacactgacacg-ccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||  |||||||||| |||||||||||||| ||||| |||||| |||||||||    
T  32434792 cggacactgacaccaccgacacaactaataatttgaaaaagtcacataattcattgtaattac 32434730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 383
Target Start/End: Complemental strand, 17831642 - 17831548
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| |||||||||||| || ||||||||| || |||||||      ||||||||||||||  | |||||||||| |||||||||  |||||||||||    
T  17831642 acctatgaagcacggatacagacacagacaccggatacgacac------tgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaa 17831549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 18337338 - 18337374
Alignment:
Q  350 aataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||| ||||||||||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattac 18337374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 21366103 - 21366039
Alignment:
Q  317 acacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    |||||||||| |||| ||||||||| |||| | |||||||| ||||||| ||| |||||||||||    
T  21366103 acacgacacgaacaccgacacgccggcacagctaataattttaaaaaataacataattcagtgta 21366039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 17754289 - 17754352
Alignment:
Q  319 acgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    ||||||| ||| ||||||| |||||||  | |||||||||||||||| ||| ||||||||||||    
T  17754289 acgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaa 17754352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 19058941 - 19058870
Alignment:
Q  316 gacacgacacggacact-gacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||  ||||| |||||||||||||| | |||||||| |||| || ||| ||||||||||||||||    
T  19058941 gacacgacacacacacttgacacgccgacacagctaataatttaaaaagataacataattcagtgtaattac 19058870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 23636132 - 23636065
Alignment:
Q  317 acacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||||||||||||| ||||||||||| ||  | || ||||||| ||||| ||| ||||||||||||||    
T  23636132 acacgacacggacattgacacgccgaaaccgccaaaaatttgagaaaattacataattcagtgtaatt 23636065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 29144472 - 29144372
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacg-acacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    |||| ||||| ||||||||| ||||| ||  |||||| |||| |||||||| ||||||||||| | |||||||||||||||  | | ||| |||||||||    
T  29144472 ctatgaagcatggatacggacacagatac--gacacggacactgacactgatacgccgacacagctaataatttgaaaaaaatagataatgcagtgtaat 29144375  T
Q  384 tac 386  Q
    |||    
T  29144374 tac 29144372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 30359374 - 30359429
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    ||||||||||| ||| ||||||  ||||||||||||||||||| |||| |||||||    
T  30359374 gacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgtaa 30359429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 385
Target Start/End: Complemental strand, 1864979 - 1864895
Alignment:
Q  299 tacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||| | ||||||||| || ||| | || ||||||||   |||||||||| ||||||||| |||||||||||||||    
T  1864979 tacggatacagacacaa-acacgacacagatact-atacaccgacacagttaataatttgagaaaatcacataattcagtgtaatta 1864895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 13997869 - 13997927
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||||||    ||| |||| ||||||||||| |||||||||||||||    
T  13997869 gacactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaatta 13997927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 382
Target Start/End: Complemental strand, 15641114 - 15641048
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||| |||||||||||||||| ||||||||  | |||||||| | |||||||||  |||||||||||    
T  15641114 gacatgacacggacactgacatgccgacactgctaataatttaagaaaatcacatgattcagtgtaa 15641048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 18471276 - 18471345
Alignment:
Q  319 acgacacggacactgacacgccgacacaacaaataatttg--aaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||| |||| || ||||||| | |||||||||  ||||||||||| |||||||| |||||||    
T  18471276 acgacacggacaatgacccgtcgacacagctaataatttgaaaaaaaatcacataattcagtataattac 18471345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 23622304 - 23622362
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||| |||||||||||| || |||| ||| ||||||||||| || ||||||||||||    
T  23622304 gacactaacacgccgacaccactaatagtttaaaaaaatcacataactcagtgtaatta 23622362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 23738676 - 23738722
Alignment:
Q  339 ccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| | |||||||||||||||||||| ||||||||| |||||    
T  23738676 ccgacacagctaataatttgaaaaaatcacataattcagtgcaatta 23738722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 28663573 - 28663627
Alignment:
Q  310 acaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaa 364  Q
    ||||||||||| |||||||||| |||| |||||||||||  ||||||| ||||||    
T  28663573 acaccagacaccacacggacacagacatgccgacacaaccgataatttaaaaaaa 28663627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 51410016 - 51410070
Alignment:
Q  333 gacacgccgacacaacaaataatttgaaaa-aatcacaaaattcagtgtaattac 386  Q
    |||| ||||||||| | ||||||||||||| ||||||| ||||||||||||||||    
T  51410016 gacatgccgacacatctaataatttgaaaaaaatcacataattcagtgtaattac 51410070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 6332671 - 6332715
Alignment:
Q  341 gacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||||    
T  6332671 gacacaactaataatttgaaaaa-tcacataattcagtgtaattac 6332715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 6427447 - 6427484
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaa 364  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  6427447 gacactgacatgccgacacaactaataatttgaaaaaa 6427484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 18190167 - 18190122
Alignment:
Q  341 gacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| | |||||||||||||||| ||| ||||||||||||||||    
T  18190167 gacacacctaataatttgaaaaaattacataattcagtgtaattac 18190122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 377
Target Start/End: Complemental strand, 23705546 - 23705489
Alignment:
Q  320 cgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcag 377  Q
    |||||| || |||||||| ||||| |  | ||||||||||||||||||||||||||||    
T  23705546 cgacactgaaactgacacaccgacgccgctaataatttgaaaaaatcacaaaattcag 23705489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 25361881 - 25361930
Alignment:
Q  336 acgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||| ||  ||||||||| ||||||||| |||||||||||||||    
T  25361881 acgccgacaccactgataatttgagaaaatcacataattcagtgtaatta 25361930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 385
Target Start/End: Complemental strand, 6415080 - 6415016
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||||||||||||   | ||| |||||| ||||||||| ||| |||| ||||||    
T  6415080 gacacggacactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaatta 6415016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 381
Target Start/End: Complemental strand, 40285769 - 40285673
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    |||| ||||||||||||| | |  || ||||| ||||| | |||||||||||| || ||||  | |||||||||| |||||| || |||||||||||    
T  40285769 ctatgaagcacggatacgaacatggaaaccaggcacgagatggacactgacacaccaacaccgctaataatttgagaaaatcgcataattcagtgta 40285673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 8777088 - 8776987
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||||||||||| || |||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8777088 ctatgaagcacggatacggacacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaatt 8776989  T
Q  385 ac 386  Q
    ||    
T  8776988 ac 8776987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 9107488 - 9107384
Alignment:
Q  282 aacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    ||||||| |||||||||||| || || |||||| ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  9107488 aacctatgaagcacggatactgacacggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgta 9107389  T
Q  382 attac 386  Q
    |||||    
T  9107388 attac 9107384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 300 - 386
Target Start/End: Complemental strand, 8365619 - 8365533
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||||||    
T  8365619 acggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattac 8365533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 16766646 - 16766742
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| ||||||||| || |||||| ||||||||| ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  16766646 aagcatggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattac 16766742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 282 - 385
Target Start/End: Original strand, 7938057 - 7938160
Alignment:
Q  282 aacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    ||||||| ||||||||||||||| || |||||| ||||||||| ||||||||||||||||||||| | |||||||||||||||||| | |||| ||||||    
T  7938057 aacctatgaagcacggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgta 7938156  T
Q  382 atta 385  Q
    ||||    
T  7938157 atta 7938160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 34595102 - 34595179
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  34595102 gacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattac 34595179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 386
Target Start/End: Original strand, 1681700 - 1681803
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| |||||||||||| || |||||||||  |||||||||  ||||| ||||||||||||||| |||||||||||||||||||  ||||||||||||    
T  1681700 acctatgaagcacggatacagacacagacaccgaacacgacacatacactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaa 1681799  T
Q  383 ttac 386  Q
    ||||    
T  1681800 ttac 1681803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 7977945 - 7977844
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||||||||||||||| ||| || |||||  ||||||||| ||| ||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  7977945 ctataaagcacggatatggacacggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatt 7977846  T
Q  385 ac 386  Q
    ||    
T  7977845 ac 7977844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 386
Target Start/End: Complemental strand, 853959 - 853873
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| |||||| |||||||||||||  |||||||||||||||||| |||||||||||||||||||| |||| |||| ||||||    
T  853959 acggatacggacaccggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattac 853873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 10770758 - 10770688
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  10770758 gacacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattac 10770688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 12696299 - 12696369
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||||    
T  12696299 gacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattac 12696369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 16833283 - 16833353
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||    
T  16833283 gacacgacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattac 16833353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 300 - 385
Target Start/End: Original strand, 9658839 - 9658923
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||| |||||||||||||||||||||||||||||||  | |||||||| | ||||||||| |||||||||||||||    
T  9658839 acggatacagacac-agacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaatta 9658923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 426629 - 426528
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||| |||||| || || || ||| |||||||||||||||||||||||||||||||   |||||||||||||||||||| |||| | |||||||    
T  426629 ctatgaagcatggatacagacacggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaatt 426530  T
Q  385 ac 386  Q
    ||    
T  426529 ac 426528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 17841668 - 17841603
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||||||    
T  17841668 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattac 17841603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 9027122 - 9027222
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| |||||| |||||||| || ||| || ||||||||||||||||||||||||||||||  | |||||||||| | ||||||| ||||| ||||||||    
T  9027122 ctatgaagcaccgatacggacacggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaatt 9027221  T
Q  385 a 385  Q
    |    
T  9027222 a 9027222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 385
Target Start/End: Complemental strand, 34290195 - 34290092
Alignment:
Q  282 aacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    ||||||| |||||| |||||||| ||||||||| || | |||||  ||||||||| ||||||||||| |||||||||  | ||||||| |||||||||||    
T  34290195 aacctatgaagcacagatacggacacagacaccggataagacacaaacactgacatgccgacacaactaataatttgcgagaatcacataattcagtgta 34290096  T
Q  382 atta 385  Q
    ||||    
T  34290095 atta 34290092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 3398595 - 3398662
Alignment:
Q  317 acacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||||||| | |||||||||||||||    
T  3398595 acacgacacggacactgacacgccgacacagctaataatttg-aaaaatcatataattcagtgtaatta 3398662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 7740610 - 7740685
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||||| |||||||||||| || ||| |||||||||||  |||||||||||||| ||||||||||    
T  7740610 gacaccagacacgacacg-acactgacacgctgatacatcaaataatttgtgaaaatcacaaaattgagtgtaatta 7740685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 18367781 - 18367880
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||||||||||| || |||||| ||||||||| |||||| |||||||||||||| | |||  ||| | ||||||||||||| ||||||||||    
T  18367781 ctatgaagcacggatacggacacggacaccggacacgacatggacac-gacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaatt 18367879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 7801228 - 7801170
Alignment:
Q  328 acactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  7801228 acactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattac 7801170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 384
Target Start/End: Original strand, 7930266 - 7930348
Alignment:
Q  302 ggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    ||||||||||||| |||||   ||||||||||||| ||||||||||  |||||||||||||||||||| |||| |||| ||||    
T  7930266 ggatacagacaccggacacagaacggacactgacatgccgacacaattaataatttgaaaaaatcacataatttagtgaaatt 7930348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 15489816 - 15489746
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| ||||||||||| ||||| ||||||||| |||||||||||||||| ||| |||||| |||||||||    
T  15489816 gacacaacacggacactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattac 15489746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 31959134 - 31959204
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| |||||| |||||||||||||| |||| | |||||||||||||||||||| ||| ||||||||||||    
T  31959134 gacatgacacgaacactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattac 31959204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 385
Target Start/End: Complemental strand, 17341763 - 17341679
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| ||||||||| | |||||||||| |||||||||||||||||    |||||||||| ||||||||| |||||||||||||||    
T  17341763 acggacacagacacctg-cacgacacgggcactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaatta 17341679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 28152079 - 28152143
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||||| | | ||||||||| |||||||||| ||||||||||||||||    
T  28152079 gacacggacactgacacgccgacaaagctaataatttg-aaaaatcacataattcagtgtaattac 28152143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 386
Target Start/End: Original strand, 31384864 - 31384965
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||| |||||||||| ||||||  ||| || ||||| |||| || |  || ||||| |||||||||||||||||||| ||||||||||||||    
T  31384864 ctatgaagcacgaatacggatacggacaccgaacatgatacggatactggcatgttgatacaactaataatttgaaaaaatcacataattcagtgtaatt 31384963  T
Q  385 ac 386  Q
    ||    
T  31384964 ac 31384965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 385
Target Start/End: Complemental strand, 16388311 - 16388248
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||||| ||| | | |||||||||||||||||||||| |||||||||||||||    
T  16388311 gacacggacactgacacgtcgata-agcaaataatttgaaaaaatcacataattcagtgtaatta 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 24115962 - 24115862
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||| |||||||| || |||||||||  ||||||||  | ||||||||||| |||||||| |||||||| ||||||||||| |||||| | |||||    
T  24115962 ctatgaagtacggatacagacacagacaccgaacacgacataggcactgacacgctgacacaactaataatttcaaaaaatcacataattcaatataatt 24115863  T
Q  385 a 385  Q
    |    
T  24115862 a 24115862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 385
Target Start/End: Original strand, 9629348 - 9629427
Alignment:
Q  306 acagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||  ||||||||||||| | ||||||||||||||  | |||||||||| ||||||||| |||||| ||||||||    
T  9629348 acagacactggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaatta 9629427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 17302536 - 17302602
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttg-aaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| |||||||||||| |||||||| ||||||||| ||||||||||| |||||| |||||||||    
T  17302536 gacacgaacactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattac 17302602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 19044442 - 19044508
Alignment:
Q  319 acgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||| |||||||||||||||||||| || |||||||||| || |||||| |||||||||| ||||    
T  19044442 acgacatggacactgacacgccgacacgactaataatttgagaatatcacataattcagtgttatta 19044508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 1191763 - 1191714
Alignment:
Q  337 cgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||||||    
T  1191763 cgccgacacagctaataatttgaaaaattcacaaaattcagtgtaattac 1191714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 386
Target Start/End: Original strand, 25096367 - 25096468
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||||||||||| ||||||| || |||| | || || |||| ||||| |||||| |||||| || |||||||||| ||||||||| |||  |||||||||    
T  25096367 ctataaagcacgtatacggacacggacatcggatacaacacagacaccgacacgacgacaccactaataatttgagaaaatcacataatctagtgtaatt 25096466  T
Q  385 ac 386  Q
    ||    
T  25096467 ac 25096468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 386
Target Start/End: Original strand, 3209332 - 3209427
Alignment:
Q  291 agcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttg-aaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||  | || |||||| ||||||||||| |||| |||||||||||||| | ||||||||| ||||||||||| |||| ||||| |||||    
T  3209332 agcacggatacaaacacggacaccggacacgacacg-acacagacacgccgacacagctaataatttgaaaaaaatcacataatttagtgttattac 3209427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 386
Target Start/End: Complemental strand, 5970219 - 5970122
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| |||||| |||||||| || |||||| |||| |||||||||||      | |||||||   |||||||||||||||||||| ||||||||||||    
T  5970219 acctatgaagcacagatacggacacggacaccggacatgacacggacac------gtcgacacagttaataatttgaaaaaatcacataattcagtgtaa 5970126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 7265668 - 7265608
Alignment:
Q  325 cggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||| ||||  | |||||||||| ||||||||| |||||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaatta 7265608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 8805687 - 8805587
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||| ||||||  | ||| |||||||||||||||| ||||| |||||| || |||  | |||||||||| ||||||||| |||| |||||||||    
T  8805687 ctatgaagcatggatacatacacaaacaccagacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaatt 8805588  T
Q  385 a 385  Q
    |    
T  8805587 a 8805587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 13851712 - 13851780
Alignment:
Q  317 acacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||||||||| ||||||  | |||||||||| ||||| ||  |||||||||||||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaatta 13851780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 385
Target Start/End: Complemental strand, 5732620 - 5732525
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| |||||| || || |||||  ||||||||| ||||||||||||||||||||    |||||||||| ||||||||| | || ||||||||||    
T  5732620 aagcatggatacagacacggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaatta 5732525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 383
Target Start/End: Original strand, 6389702 - 6389785
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||    |||||||||| ||||| | | |||| ||||||||    
T  6389702 acggacacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaatgatataatttagtgtaat 6389785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 17435177 - 17435244
Alignment:
Q  319 acgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||| ||| ||||| | | |||||||| ||||||| ||| ||||||||||||||||    
T  17435177 acgacacggacactgatacgtcgacatagctaataattttaaaaaattacataattcagtgtaattac 17435244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 19040341 - 19040396
Alignment:
Q  330 actgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||||  | |||||||||| ||||||||| |||||||||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatta 19040396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 385
Target Start/End: Complemental strand, 7996475 - 7996393
Alignment:
Q  303 gatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||   ||| |||| ||||||||||| ||||||||  | |||||||||| ||||||| | |||||||||||||||    
T  7996475 gatacagacacagtacatgacaaggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaatta 7996393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 385
Target Start/End: Original strand, 8022326 - 8022408
Alignment:
Q  303 gatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||   ||| |||| ||||||||||| ||||||||  | |||||||||| ||||||| | |||||||||||||||    
T  8022326 gatacagacacagtacatgacaaggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaatta 8022408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 10339236 - 10339146
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgt 380  Q
    |||||||||||| || |  |||||  ||||||||| | ||||||||||||||||||  | | |||||||| ||||||||| ||||||||||    
T  10339236 aagcacggatacagacatggacacaggacacgacatgaacactgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgt 10339146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 7086766 - 7086839
Alignment:
Q  312 accagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||| ||||| |||||| || |||  | |||||||||| ||||||||| |||| ||||||||||    
T  7086766 accagacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaatta 7086839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 13360456 - 13360387
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||| ||| |||| |||||| |||||| || | |||||||| ||||||||| |||||||||||||||    
T  13360456 gacacgatacgaacacagacacgtcgacaccactagtaatttgagaaaatcacataattcagtgtaatta 13360387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 24353125 - 24353182
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaa 347  Q
    ||||||| ||||||| || |||||||||||||||||  |||| |||||||||||||||    
T  24353125 aagcacgaatacggacacggacaccagacacgacacaaacacagacacgccgacacaa 24353182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 33001373 - 33001304
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| |||||| || ||||||||||||||  | |||||||||||||||||||| |||| | ||||||||    
T  33001373 gacacaacacggtcaatgacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaatta 33001304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 365
Target Start/End: Original strand, 33303622 - 33303683
Alignment:
Q  304 atacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaat 365  Q
    |||| |||||||||||||| ||||||||||||||  |||||| |  ||||||||||||||||    
T  33303622 atacggacaccagacacgatacggacactgacacatcgacactaataataatttgaaaaaat 33303683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 34073431 - 34073362
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||||||||| ||| |||   | |||||||||| |||||| || |||||||||||||||    
T  34073431 gacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaatta 34073362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 10294051 - 10294151
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||||||||||| ||  ||||| ||||||||||||| ||||||| ||||| ||  | |||||||||| | |||| || | |||| |||||||    
T  10294051 ctatgaagcacggatacggacacgaacaccggacacgacacggatactgacatgccgataccgctaataatttgagataatcgcatatttcaatgtaatt 10294150  T
Q  385 a 385  Q
    |    
T  10294151 a 10294151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 10842518 - 10842574
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||| |||||||||||||  | |||||||||||||||||||| |||| ||||||||    
T  10842518 gacacggacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaat 10842574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 21395417 - 21395322
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||| || ||||||||| || | |||| |||||| |||||||| ||||  | |||||||||| ||||| ||| |||| |||||||||||    
T  21395417 aagcacggatacagacacagacaccggatatgacatggacaccgacacgccaacaccgctaataatttgagaaaat-acataatttagtgtaattac 21395322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 385
Target Start/End: Complemental strand, 34225868 - 34225824
Alignment:
Q  341 gacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| ||||||||||||||||| || |||||||||||||||    
T  34225868 gacacaactaataatttgaaaaaatcgcataattcagtgtaatta 34225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 283 - 386
Target Start/End: Original strand, 9522833 - 9522936
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| ||||||| || |||| |  || |||||||| || ||||||| |||||||||   ||  | |||||||| ||||||||||| ||||||||||||    
T  9522833 acctatgaagcacgaatgcggacatggataccagacatgatacggacattgacacgcctgtacgtctaataatttaaaaaaatcacataattcagtgtaa 9522932  T
Q  383 ttac 386  Q
    ||||    
T  9522933 ttac 9522936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 385
Target Start/End: Original strand, 26562662 - 26562733
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||  |||| |||| |||||||||||||  | || ||||||| ||||||||| |||||||||||||||    
T  26562662 cagacaccgcacgaacacggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaatta 26562733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 386
Target Start/End: Original strand, 28715256 - 28715340
Alignment:
Q  294 acggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||| || |||||| ||||||| |||||||||||||||         | |||||||||||||||| ||| ||||||||||||||||    
T  28715256 acggatacggacacggacaccggacacgatacggacactgacacg--------gctaataatttgaaaaaatgacataattcagtgtaattac 28715340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 386
Target Start/End: Original strand, 4877918 - 4877988
Alignment:
Q  317 acacgacacggacactgacacgccgacacaacaaataatttgaaaaaa-tcacaaaattcagtgtaattac 386  Q
    |||||||||||| | |||||| |||||||| | ||||||||||||||| ||||| |||| ||| |||||||    
T  4877918 acacgacacggatagtgacacaccgacacagctaataatttgaaaaaagtcacataattaagtataattac 4877988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 6898365 - 6898295
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||| | |||||||||||||| |||||  | ||||||||||| |||| ||| |||| |||||||||||    
T  6898365 gacacgatatggacactgacacgctgacacgtctaataatttgaacaaattacataattaagtgtaattac 6898295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 369
Target Start/End: Complemental strand, 12868748 - 12868706
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcaca 369  Q
    ||||||||||||||||||||   ||||||||||||||||||||    
T  12868748 gacactgacacgccgacacagttaataatttgaaaaaatcaca 12868706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 31579309 - 31579240
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||| |||||||| ||| || ||||    |||||||||| ||||||||| |||||||||||||||    
T  31579309 gacacgacatggacactgccacaccaacaccgttaataatttgagaaaatcacataattcagtgtaatta 31579240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 377
Target Start/End: Complemental strand, 14796269 - 14796213
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcag 377  Q
    |||||||||||||||| |||||||||||   |||||| | ||||||||| |||||||    
T  14796269 gacacggacactgacatgccgacacaaccgttaatttaagaaaatcacataattcag 14796213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 20371189 - 20371141
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcaca 369  Q
    |||||||||| ||||||||||||||  | |||||||||| |||||||||    
T  20371189 gacacggacattgacacgccgacaccgctaataatttgagaaaatcaca 20371141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 343
Target Start/End: Complemental strand, 31673595 - 31673543
Alignment:
Q  291 agcacggatacggatacagacaccagacacgacacggacactgacacgccgac 343  Q
    |||||||||||||| || |||||| |||||| |||||||||  ||||||||||    
T  31673595 agcacggatacggacacggacaccggacacggcacggacacaaacacgccgac 31673543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 282 - 386
Target Start/End: Original strand, 19482609 - 19482713
Alignment:
Q  282 aacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    ||||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||| ||||| |||||    
T  19482609 aacctatgaagcacggatacgaacacagacaccagacacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgta 19482708  T
Q  382 attac 386  Q
    |||||    
T  19482709 attac 19482713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 280 - 386
Target Start/End: Complemental strand, 23293106 - 23293000
Alignment:
Q  280 agaacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtg 379  Q
    ||||||||| |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| | |||||||||||||||||||| ||||||||     
T  23293106 agaacctatgaagcacagatacggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagta 23293007  T
Q  380 taattac 386  Q
    |||||||    
T  23293006 taattac 23293000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 386
Target Start/End: Complemental strand, 27706286 - 27706191
Alignment:
Q  291 agcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||| ||||||||  |||||||| ||||||||||| |||| |||||||||||    
T  27706286 agcacggatacggacacggacaccagacacgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattac 27706191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 36635268 - 36635368
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||| ||||| ||| ||||||||| |||||||| |||||||||||||||| |||| || |||||||||| ||||||||| ||||||||||||||    
T  36635268 ctatgaagcatggataaggacacagacaccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatt 36635367  T
Q  385 a 385  Q
    |    
T  36635368 a 36635368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 385
Target Start/End: Complemental strand, 35158091 - 35158000
Alignment:
Q  294 acggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||| || |||||| ||||| |||||||||||||||||||||| |||| ||||||||| |||||||||| |||| ||||||||||    
T  35158091 acggatacggacacggacaccggacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaatta 35158000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 12895377 - 12895289
Alignment:
Q  297 gatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||| |||||| || |||||||| ||| ||||||||||||||||  |||||||||||||||||||| ||||  |||||||||    
T  12895377 gatacggatacggacaccggatacgacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaatta 12895289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 20633429 - 20633508
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaa 364  Q
    |||| ||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||  | |||||||||||||||    
T  20633429 ctatgaagcacggatacggacacggacaccagacacgatacggacactgacacgtcgacaccgctaataatttgaaaaaa 20633508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 40481612 - 40481681
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||| |||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||    
T  40481612 gacacgacactgacactgacacgccgatacaactaataatttg-aaaaatcacataattcagtgtaattac 40481681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 21945471 - 21945548
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| |||| ||||| |||||||||| ||||||||| | |||||||||||||||| ||| ||||||||||||||||    
T  21945471 gacaccggacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattac 21945548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 385
Target Start/End: Complemental strand, 40179747 - 40179651
Alignment:
Q  289 aaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| |||||||  ||||||||  ||| ||||||||||||||||||  ||||| |  |||| ||||||||||||||| |||||||||||||||    
T  40179747 aaagcacgcatacggactcagacaccgaacatgacacggacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaatta 40179651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 379
Target Start/End: Complemental strand, 11651234 - 11651155
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtg 379  Q
    |||||||| ||||  |||||||| ||||||||||||||| ||||||| | |||||||| ||||||||||| |||||||||    
T  11651234 acggatacggacataagacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 11651155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 12708089 - 12708192
Alignment:
Q  284 cctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataa-tttgaaaaaatcacaaaattcagtgtaa 382  Q
    ||||| ||||||| ||||||| || |||| |||||||||| | ||||||||||||| |||||||| ||||| ||| ||||||| | | ||||||||||||    
T  12708089 cctatgaagcacgaatacggacacggacatcagacacgacgcagacactgacacgcagacacaactaataatttttaaaaaatgaaataattcagtgtaa 12708188  T
Q  383 ttac 386  Q
    ||||    
T  12708189 ttac 12708192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 319 - 386
Target Start/End: Complemental strand, 12797418 - 12797352
Alignment:
Q  319 acgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||| || ||| |||||||||| ||||||||| ||||||||||||||||    
T  12797418 acgacacggacactgacacgccggcaaaactaataatttga-aaaatcacataattcagtgtaattac 12797352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 24343449 - 24343551
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| ||||||||| || || || |||||| |||||||||||||| | |||||||||||||    |||||||||| ||||| ||| ||||||||||||    
T  24343449 acctatgaagcacggacacagacacggacaccggacacgacacggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaa 24343548  T
Q  383 tta 385  Q
    |||    
T  24343549 tta 24343551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 30298926 - 30298992
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttg-aaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||| ||| ||||||||||||||||    
T  30298926 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattac 30298992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 30327794 - 30327860
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttg-aaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||| ||| ||||||||||||||||    
T  30327794 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattac 30327860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 49431000 - 49431070
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttg-aaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| |||||| ||||||||||||||| | ||||||||| ||||||||||| |||||||||||||||    
T  49431000 gacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaatta 49431070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 385
Target Start/End: Complemental strand, 5414263 - 5414187
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||| |||||||||||||||| |||||||||||||| | |||  ||| | ||||||||||||| |||||||||||    
T  5414263 gacaccggacacgacacggacacggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaatta 5414187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 386
Target Start/End: Original strand, 28084483 - 28084567
Alignment:
Q  303 gatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttg-aaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| |||||| |||||||||| ||| |||||||||||||||| | || |||||| ||||||||||| |||||| |||||||||    
T  28084483 gatacggacaccggacacgacacagacgctgacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattac 28084567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 20521940 - 20521873
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattca 376  Q
    |||||||||||||||||||||||||||||||||| ||    |||||||||| ||||||||| ||||||    
T  20521940 gacaccagacacgacacggacactgacacgccgataccgataataatttgataaaatcacataattca 20521873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 3947850 - 3947780
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| |||| ||||| |||| ||||||||| | ||||||||||||||||| || ||||||||||||||||    
T  3947850 gacaccacacagacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattac 3947780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 4383351 - 4383412
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||| ||| ||||| ||||||||| |||||||||| ||||||||||||||||    
T  4383351 acggacactgacacgtcgatacaactaataatttg-aaaaatcacataattcagtgtaattac 4383412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 54580087 - 54580038
Alignment:
Q  336 acgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||| |||||||| |||||||||||||||||||| |||||||||||||||    
T  54580087 acgctgacacaactaataatttgaaaaaatcacataattcagtgtaatta 54580038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 903866 - 903966
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||||||||||| || | | |||||||  | |||||||||||||| ||| |||    |||||||||| ||||||||| ||||||||||||||    
T  903866 ctatgaagcacggatacggacacgggcgccagacataaaacggacactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaatt 903965  T
Q  385 a 385  Q
    |    
T  903966 a 903966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 4157102 - 4157154
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacac 337  Q
    |||| ||||||||||||||| || ||||||||||||||||| |||||||||||    
T  4157102 ctatgaagcacggatacggacacggacaccagacacgacacagacactgacac 4157154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 10499383 - 10499285
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||| |||||| ||||| |||||||||||| |||| ||||||||||| |||||||| | || || |||| ||||||||| |||| |||||||||    
T  10499383 ctatgaagcatggatacagatacggacaccagacac-acactgacactgacacaccgacacatctaa-aacttgagaaaatcacataatttagtgtaatt 10499286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 13783261 - 13783325
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||||| |||||||  | ||| |||||| || ||||||||||||||||||||||    
T  13783261 gacacggacactgacacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaatta 13783325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 11596425 - 11596366
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| ||||| ||| | | |||||||||||||||||||| ||||||||||||||||    
T  11596425 gacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattac 11596366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 15029751 - 15029809
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||| |||||  | ||||||||||||| |||||| |||||||||||||||    
T  15029751 gacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaatta 15029809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 6485690 - 6485625
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||  |||||| |||| ||  |||||||||||||||||||| |||| |||||||||||    
T  6485690 gacacggacacctacacgcagacaaaattaataatttgaaaaaatcacataatttagtgtaattac 6485625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 12895194 - 12895130
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||| |||||||||| ||| | |||||||||||||||||||| ||||||  ||||||||    
T  12895194 gacacggacac-gacacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattac 12895130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 14126195 - 14126126
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||| |||||| ||||||||||||    |||||||||| ||| ||||| |||||||||||||||    
T  14126195 gacacgacacagacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaatta 14126126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 14465154 - 14465089
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| ||||||||||| |  ||||| | |||||||||||||||||||| |||||| |||||||||    
T  14465154 gacacagacactgacactctaacacacctaataatttgaaaaaatcacataattcaatgtaattac 14465089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 847900 - 847996
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||| |  ||| || |||||||||| ||||||||||||||||  |  | |||||||||| ||||| ||| |||||| | |||||||    
T  847900 aagcacggatacggacatggaccccggacacgacacagacactgacacgccgatgccgctaataatttgagaaaattacataattcactataattac 847996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 385
Target Start/End: Complemental strand, 2362058 - 2361990
Alignment:
Q  317 acacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||  |||| |||||| |||||||| | |||||||||||||||| ||| |||| ||||||||||    
T  2362058 acacgacattgacattgacacaccgacacagctaataatttgaaaaaattacataatttagtgtaatta 2361990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 28964298 - 28964262
Alignment:
Q  350 aataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||| ||||||||||||||||    
T  28964298 aataatttgaaaaaatcacataattcagtgtaattac 28964262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 29205453 - 29205489
Alignment:
Q  350 aataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||| ||||||||||||||||    
T  29205453 aataatttgaaaaaatcacataattcagtgtaattac 29205489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 386
Target Start/End: Complemental strand, 753033 - 752947
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaa-tcacaaaattcagtgtaattac 386  Q
    ||||||||||||||  ||||||||||  || || |||| |||||||| | |||||||| |||||| ||||| ||||||||||||||||    
T  753033 acggatacagacacg-gacacgacacatactctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattac 752947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 385
Target Start/End: Complemental strand, 22440686 - 22440615
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||| ||||||||| ||  ||||||    |||||||||| ||||||||| |||||||||||||||    
T  22440686 cagacacgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaatta 22440615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 28720851 - 28720898
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaa 363  Q
    ||||||||||| ||||||||| ||||||||| | ||||||||||||||    
T  28720851 gacacgacacgaacactgacatgccgacacagctaataatttgaaaaa 28720898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 380
Target Start/End: Original strand, 7012039 - 7012105
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgt 380  Q
    |||||| ||||||||||| |||||||||||||    |||||||||| ||||| ||| ||||||||||    
T  7012039 cagacaggacacggacaccgacacgccgacaccgataataatttgagaaaatgacataattcagtgt 7012105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 16303350 - 16303280
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||| ||||||||||||||||||||| |   |||| ||||||||||| | | |||| |||||||||||    
T  16303350 gacacgatacggacactgacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaattac 16303280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 24543967 - 24544005
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaat 365  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  24543967 gacactgacacgccgacacaactaataatttaaaaaaat 24544005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 385
Target Start/End: Original strand, 24999054 - 24999088
Alignment:
Q  351 ataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||||||| |||||||||||||||    
T  24999054 ataatttgaaaaaatcacacaattcagtgtaatta 24999088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 384
Target Start/End: Complemental strand, 22234967 - 22234906
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaa-tcacaaaattcagtgtaatt 384  Q
    |||||||| |||||||||||||  | || |||||||||||| ||||| ||||||||||||||    
T  22234967 acggacacggacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaatt 22234906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 32273594 - 32273549
Alignment:
Q  332 tgacacgccgacacaacaaataatttgaaaaaatcacaaaattcag 377  Q
    ||||||||| ||||||| |||||||||||||||| ||| |||||||    
T  32273594 tgacacgccaacacaactaataatttgaaaaaataacataattcag 32273549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 38847079 - 38847026
Alignment:
Q  333 gacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| |||||||| | |||||||||||||||||| |  |||||||||||||||    
T  38847079 gacactccgacacagctaataatttgaaaaaatcatattattcagtgtaattac 38847026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 385
Target Start/End: Original strand, 40613441 - 40613494
Alignment:
Q  332 tgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||  | |||| ||||| ||||||||| |||||||||||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaatta 40613494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 50280867 - 50280920
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgt 380  Q
    ||||| |||||||||||||| | |||||||||||||| ||||| |||| |||||    
T  50280867 gacacggacacgccgacacagctaataatttgaaaaattcacataattaagtgt 50280920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 5111584 - 5111640
Alignment:
Q  280 agaacctataaagcacggatacggatacagacaccagacacgacacggacactgaca 336  Q
    ||||||||| ||||||||||||||  || |||||| || |||||| |||||||||||    
T  5111584 agaacctatgaagcacggatacgggcacggacaccggatacgacatggacactgaca 5111640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 369
Target Start/End: Complemental strand, 11110757 - 11110713
Alignment:
Q  325 cggacactgacacgccgacacaacaaataatttgaaaaaatcaca 369  Q
    ||||||| |||||||||||||||  ||||||||||||| ||||||    
T  11110757 cggacacagacacgccgacacaaggaataatttgaaaatatcaca 11110713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 12628669 - 12628617
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcac 368  Q
    |||| ||||| |||||||||| |||||||||   |||||||||||||||||||    
T  12628669 gacatgacactgacactgacatgccgacacagttaataatttgaaaaaatcac 12628617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 16073380 - 16073439
Alignment:
Q  326 ggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| |||||||||| ||||||  ||||||||| ||||||| || ||||||||||||||||    
T  16073380 ggactctgacacgccaacacaagtaataatttg-aaaaatcgcataattcagtgtaattac 16073439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 28470341 - 28470393
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacac 337  Q
    |||| |||||||||||||||||| |||||| || | ||||| |||||||||||    
T  28470341 ctatgaagcacggatacggatacggacaccggatatgacacagacactgacac 28470393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 34306876 - 34306840
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaa 363  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  34306876 gacactgatacgccgacacaactaataatttgaaaaa 34306840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 283 - 386
Target Start/End: Complemental strand, 29510421 - 29510318
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| |||||||||||| || |  |||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||    
T  29510421 acctatgaagcacggatactgacatggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataa 29510322  T
Q  383 ttac 386  Q
    ||||    
T  29510321 ttac 29510318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 285 - 386
Target Start/End: Original strand, 22651920 - 22652021
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||| ||||||||||| || |||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||| | |||||    
T  22651920 ctatgaagtacggatacggacactgacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataatt 22652019  T
Q  385 ac 386  Q
    ||    
T  22652020 ac 22652021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 297 - 386
Target Start/End: Complemental strand, 4673528 - 4673439
Alignment:
Q  297 gatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||| |||| | |||||||||| ||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||    
T  4673528 gatacggatacggacatcggacacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaattac 4673439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 36450833 - 36450768
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  36450833 gacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattac 36450768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 385
Target Start/End: Original strand, 36934619 - 36934714
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| ||||||||||||| |||||| |||||||||||||||| ||||| ||||||  | ||||||| |||||||||||| |||||| ||||||||    
T  36934619 aagcatggatacggatacaaacaccaaacacgacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaatta 36934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 2572171 - 2572070
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||| ||||||||| || |||||  ||||||||||||| || |||||| ||||||| | |||||||||||||||||||| |||| |||||||||    
T  2572171 ctatgaagcatggatacggacacggacactggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaatt 2572072  T
Q  385 ac 386  Q
    ||    
T  2572071 ac 2572070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 15816205 - 15816144
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||    
T  15816205 acggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatta 15816144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 24362317 - 24362217
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| |||||| ||||||||||| |||||| || ||||||| ||||| |||||||||||||  | |||||||||| | ||||||| ||||||||||||||    
T  24362317 ctatgaagcacagatacggatacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaatt 24362218  T
Q  385 a 385  Q
    |    
T  24362217 a 24362217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 370
Target Start/End: Complemental strand, 24196698 - 24196627
Alignment:
Q  299 tacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaa 370  Q
    ||||||||||||||||  | |||| |||||||| |||||||||||||||| |||||||||||||||||||||    
T  24196698 tacggatacagacaccgaatacgatacggacaccgacacgccgacacaactaataatttgaaaaaatcacaa 24196627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 20873044 - 20873114
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||||||||| |   |||||||||||||||||||| |||| |||||||||||    
T  20873044 gacacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattac 20873114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 386
Target Start/End: Complemental strand, 18170564 - 18170496
Alignment:
Q  318 cacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||| ||| |||||| |||||||||    
T  18170564 cacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattac 18170496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 386
Target Start/End: Complemental strand, 18634132 - 18634064
Alignment:
Q  318 cacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||| ||| |||||| |||||||||    
T  18634132 cacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattac 18634064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 385
Target Start/End: Complemental strand, 926898 - 926803
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||| | || |||||| ||||||||||||||||||||||||| ||||  | |||||||||| |||||| ||   |||||||||||||    
T  926898 aagcacggatacgaacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaatta 926803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 13437055 - 13436988
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattca 376  Q
    |||||| |||| |||| ||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  13437055 gacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 299 - 386
Target Start/End: Original strand, 31556955 - 31557041
Alignment:
Q  299 tacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||| |||||| |||| |||| || ||||||||||||||||||   ||||||||| |||||||||| ||||||||||||||||    
T  31556955 tacggatacggacaccggacatgacatggtcactgacacgccgacacagttaataatttg-aaaaatcacataattcagtgtaattac 31557041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 379
Target Start/End: Complemental strand, 41838223 - 41838144
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtg 379  Q
    |||||||| ||||  |||||||| ||||||||||||||| ||||||| | |||||||| ||||||||||| |||||||||    
T  41838223 acggatacggacataagacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 41838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 386
Target Start/End: Complemental strand, 22197833 - 22197756
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| |||||||||| |||||| ||||||| ||||| | |||||||||||||| ||||| |||| |||||||||||    
T  22197833 gacaccggacacgacacagacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaattac 22197756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 25192431 - 25192362
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||| ||||||||||||||||||||||| | |||||||||||||| | ||| |||||||| ||||||    
T  25192431 gacacgatacggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataatta 25192362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 30271366 - 30271305
Alignment:
Q  325 cggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||| | ||| |||||||||||||||| ||| ||||||||||||    
T  30271366 cggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattac 30271305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 385
Target Start/End: Original strand, 44067459 - 44067560
Alignment:
Q  284 cctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||| ||||||||| || || || |||||||||||| |||| |||||||||||||||||||    |||||||||| ||||| ||| ||| |||||||||    
T  44067459 cctatgaagcacggacacagacacggacaccagacaccacaccgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaat 44067558  T
Q  384 ta 385  Q
    ||    
T  44067559 ta 44067560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 37283925 - 37283825
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||||||||| | |  ||||||||||| |||||||||||||||| || | |||  | |||||| ||| ||||||||| ||||||||||||||    
T  37283925 ctatgaagcacggatacgtacatggacaccagacatgacacggacactgacatgcgggcaccgctaataatctgagaaaatcacataattcagtgtaatt 37283826  T
Q  385 a 385  Q
    |    
T  37283825 a 37283825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 336
Target Start/End: Complemental strand, 24413675 - 24413624
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgaca 336  Q
    |||| ||||||||||||||| || ||||||||||||||||||||||||||||    
T  24413675 ctatgaagcacggatacggacacggacaccagacacgacacggacactgaca 24413624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 8343291 - 8343361
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||| ||||| ||||| |||||| | | |||||||||||||||||||| |||| |||||||||||    
T  8343291 gacacgacactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattac 8343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 22595981 - 22596039
Alignment:
Q  328 acactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||| | |||||||| ||||||| ||| ||||||||||||||||    
T  22595981 acactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattac 22596039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 383
Target Start/End: Original strand, 24857962 - 24858054
Alignment:
Q  294 acggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttg---aaaaaatcacaaaattcagtgtaat 383  Q
    ||||||||||| ||  ||||| |||||||||||||||  ||||||||||||||   |||||||||   ||||||||||| |||||||||||||    
T  24857962 acggatacggacacgaacaccggacacgacacggacatggacacgccgacacagttaataatttgaaaaaaaaatcacataattcagtgtaat 24858054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 385
Target Start/End: Original strand, 3677759 - 3677830
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||| ||||||||  ||||||||  |||||||| ||||||||||| |||||  ||||||||    
T  3677759 cagacacgacacggatactgacacatcgacacaattaataattttaaaaaatcacataattctatgtaatta 3677830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 4298970 - 4298900
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||| || ||| |||||||||||||   |||||||||||||||||||| |||| | |||||||||    
T  4298970 gacacgacacagatactaacacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattac 4298900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 4786411 - 4786353
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||||||| |  |||||||| | ||||||||| |||||||||||||||    
T  4786411 gacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaatta 4786353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 385
Target Start/End: Complemental strand, 11927183 - 11927101
Alignment:
Q  303 gatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| ||||||| ||||||||||||  || | ||||||||||    |||||||||| ||||||||| |||||||||||||||    
T  11927183 gatacggacaccaaacacgacacggatgctaatacgccgacactgttaataatttgataaaatcacataattcagtgtaatta 11927101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 385
Target Start/End: Original strand, 11944627 - 11944709
Alignment:
Q  303 gatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| ||||||| ||||||||||||  || ||||||||||||    |||||||||| ||||||||| || ||||||||||||    
T  11944627 gatacggacaccaaacacgacacggatgctaacacgccgacactgttaataatttgataaaatcacataactcagtgtaatta 11944709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 18407695 - 18407764
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||| |||| |||| ||||||||| | |||||||  ||||||||||| ||||||||||||||||    
T  18407695 gacacgacacg-acacagacatgccgacacagctaataattcaaaaaaatcacataattcagtgtaattac 18407764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 18964121 - 18964167
Alignment:
Q  291 agcacggatacggatacagacaccagacacgacacggacactgacac 337  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||    
T  18964121 agcacagatacggacacggacaccagacacgacacggacactgacac 18964167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 3951649 - 3951592
Alignment:
Q  280 agaacctataaagcacggatacggatacagacaccagacacgacacggacactgacac 337  Q
    |||| |||| ||||||||||||||| || ||||||||| ||||||||||||| |||||    
T  3951649 agaatctatgaagcacggatacggacacggacaccagatacgacacggacaccgacac 3951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 25566841 - 25566886
Alignment:
Q  341 gacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| | |||||||||||||||||||| ||||||||||||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgtaattac 25566886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 27213522 - 27213591
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||| || |||||||||||||  | |||||||| | ||||||||| |||||| ||||||||    
T  27213522 gacacgacacggatacagacacgccgacactgctaataatttcagaaaatcacataattcactgtaatta 27213591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 34897068 - 34897129
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| |||||| ||||||  | |||||||||| ||||||||| |||||||||||||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaatta 34897129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 4948661 - 4948697
Alignment:
Q  350 aataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||| ||||||||||||||||    
T  4948661 aataatttgaaaaaatcacataattcagtgtaattac 4948697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 14134679 - 14134743
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| ||||| |||||| |||||  || |||||||||| ||||||||| |||||||||||||||    
T  14134679 gacaccgacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaatta 14134743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 16642081 - 16642029
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacac 337  Q
    |||| |||||||||||||||||| ||| || |||||||||| |||||||||||    
T  16642081 ctatgaagcacggatacggatacggacgccggacacgacacagacactgacac 16642029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 30077461 - 30077401
Alignment:
Q  326 ggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| |||||||| || || | ||||||||||||| |||||| ||||||||||||||||    
T  30077461 ggacacggacacgccaacgcagctaataatttgaaaacatcacataattcagtgtaattac 30077401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 22204622 - 22204661
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaa 363  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  22204622 acggacactgacacgccgacacaactaataatttaaaaaa 22204661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 5813575 - 5813633
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||||| |||||||||||||| | |||||||||||||| ||||| | || |||||||    
T  5813575 acggacacggacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaa 5813633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 13844669 - 13844611
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| |||||||||||||  | |||||||||| ||||||||| |||| ||||||||||    
T  13844669 gacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaatta 13844611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 386
Target Start/End: Complemental strand, 17468568 - 17468522
Alignment:
Q  340 cgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||| |||||||||| ||| | ||||||||||    
T  17468568 cgacacaacaaataatttgtaaaaatcacataatgcggtgtaattac 17468522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 24669408 - 24669478
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||| ||||||||||||| |||||    ||||||||||  |||| ||| ||||||||||||||||    
T  24669408 gacacgacacagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattac 24669478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 39954352 - 39954294
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| |||||||||||||  | |||||||||| ||||||||| |||| ||||||||||    
T  39954352 gacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaatta 39954294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 386
Target Start/End: Original strand, 40332198 - 40332236
Alignment:
Q  348 caaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  40332198 caaataatttgagaaaatcacataattcagtgtaattac 40332236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 41832012 - 41831958
Alignment:
Q  328 acactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||| |||| |||||||||   |||||||||||||||||||| ||||||||||||    
T  41832012 acacagacatgccgacacagttaataatttgaaaaaatcacataattcagtgtaa 41831958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 7658458 - 7658507
Alignment:
Q  336 acgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||| || |||||||||| ||||| ||| |||||||||||||||    
T  7658458 acgccgacaccactaataatttgagaaaattacataattcagtgtaatta 7658507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 385
Target Start/End: Original strand, 13203600 - 13203685
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| || ||| ||||||||||  ||||||| ||| | |||  || |||||||||| ||||| ||| |||||||||||||||    
T  13203600 acggatacggatacccgacacgacacaaacactgatacgtcaacaacactaataatttgagaaaattacataattcagtgtaatta 13203685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 21465367 - 21465416
Alignment:
Q  282 aacctataaagcacggatacggatacagacaccagacacgacacggacac 331  Q
    ||||||| ||| |||||||| ||||| |||||| ||||||||||||||||    
T  21465367 aacctatgaaggacggatacagatacggacaccggacacgacacggacac 21465416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 24613509 - 24613565
Alignment:
Q  329 cactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||| |||||||| | ||||||||| |||||||||| |||| |||||||||||    
T  24613509 cactgacacaccgacacagctaataatttg-aaaaatcacataattaagtgtaattac 24613565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 379
Target Start/End: Original strand, 27101500 - 27101553
Alignment:
Q  326 ggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtg 379  Q
    ||||| ||||||||||||||  | |||||||||||||||||||| |||| ||||    
T  27101500 ggacattgacacgccgacaccgctaataatttgaaaaaatcacataatttagtg 27101553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 31109597 - 31109540
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagt 378  Q
    |||||||||||||||||||||||||    |||||||||| ||||||| | ||||||||    
T  31109597 gacacggacactgacacgccgacaccgttaataatttgagaaaatcaaacaattcagt 31109540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 3454471 - 3454515
Alignment:
Q  293 cacggatacggatacagacaccagacacgacacggacactgacac 337  Q
    ||||||||||||||||||||||  ||||||||  |||||||||||    
T  3454471 cacggatacggatacagacaccgaacacgacagagacactgacac 3454515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 8342981 - 8343017
Alignment:
Q  350 aataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||| |||| |||||||||||    
T  8342981 aataatttgaaaaaatcacataatttagtgtaattac 8343017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 18069238 - 18069186
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacac 337  Q
    |||| ||||||||||| ||| |||||||| |||||| ||||||||| ||||||    
T  18069238 ctatgaagcacggatatggacacagacacaagacacaacacggacagtgacac 18069186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 385
Target Start/End: Complemental strand, 28385077 - 28385009
Alignment:
Q  317 acacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||||||||  |||||||    |||||| |||| ||||| || |||||||||||||||    
T  28385077 acacgacacggacactgacataccgacaccgttaataatatgaataaatctcataattcagtgtaatta 28385009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 385
Target Start/End: Complemental strand, 31236644 - 31236592
Alignment:
Q  333 gacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||  | |||||||||| ||||||||| |||||| ||||||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaatta 31236592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 43737928 - 43737876
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacac 337  Q
    |||| |||||||||||| || || |||||| |||||||||||||||| |||||    
T  43737928 ctatgaagcacggatacagacacggacaccggacacgacacggacaccgacac 43737876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 17177141 - 17177037
Alignment:
Q  282 aacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    ||||||| ||||||||||||||| |||||||||||| ||||| |||||||||| ||||| ||||| | |||||||||||||||||| |||||||| ||||    
T  17177141 aacctatgaagcacggatacggacacagacaccagatacgactcggacactgatacgccaacacagctaataatttgaaaaaatcaaaaaattcattgta 17177042  T
Q  382 attac 386  Q
    |||||    
T  17177041 attac 17177037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 21522693 - 21522795
Alignment:
Q  284 cctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||| ||||||||||||||| || | |||| ||||||||||||||||||||||||||||||| | |||||||| ||||||| ||| |||||||||||||    
T  21522693 cctatgaagcacggatacggacacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaat 21522792  T
Q  384 tac 386  Q
    |||    
T  21522793 tac 21522795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 21533259 - 21533361
Alignment:
Q  284 cctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||| ||||||||||||||| || | |||| ||||||||||||||||||||||||||||||| | |||||||| ||||||| ||| |||||||||||||    
T  21533259 cctatgaagcacggatacggacacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaat 21533358  T
Q  384 tac 386  Q
    |||    
T  21533359 tac 21533361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 298 - 386
Target Start/End: Complemental strand, 21191158 - 21191070
Alignment:
Q  298 atacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||| || |||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  21191158 atacggacactgacaccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattac 21191070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 289 - 382
Target Start/End: Complemental strand, 13287510 - 13287417
Alignment:
Q  289 aaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||||||||||||| || |||||| ||||||||||||||||| ||||| |||||||   |||||||||||||||||||| ||||||||||||    
T  13287510 aaagcacggatacggacacggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaa 13287417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 282 - 381
Target Start/End: Original strand, 6770484 - 6770583
Alignment:
Q  282 aacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    ||||||| |||||||||||||||||| ||||||  ||| ||||||||||||||||| | |||||||| |||||||| | ||||||||| |||||||||||    
T  6770484 aacctatgaagcacggatacggatacggacaccgaacatgacacggacactgacacactgacacaactaataatttaagaaaatcacataattcagtgta 6770583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 385
Target Start/End: Original strand, 41995420 - 41995515
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||| || |||||  || ||||||| |||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||    
T  41995420 aagcacggatacggacacggacactggatacgacacagacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 386
Target Start/End: Original strand, 6247581 - 6247667
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| | |||||| ||||||| ||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  6247581 acggatgcggacaccggacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattac 6247667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 386
Target Start/End: Complemental strand, 37328944 - 37328858
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| || ||||||  |||||||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||||    
T  37328944 acggacacggacaccgaacacgacacggacactgatacaccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattac 37328858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 15382420 - 15382524
Alignment:
Q  284 cctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttg--aaaaaatcacaaaattcagtgta 381  Q
    ||||| ||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||| | |||||||||  ||||||||| | |||||||| ||    
T  15382420 cctatgaagcacggatacggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtata 15382519  T
Q  382 attac 386  Q
    |||||    
T  15382520 attac 15382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 300 - 385
Target Start/End: Original strand, 22013373 - 22013458
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||| | ||||||||| |||||| ||| |||| ||||||||||    
T  22013373 acggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaatta 22013458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 21541984 - 21542075
Alignment:
Q  295 cggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||| || ||||||||||||||||| |||| ||||| ||||||||||| |||||||| |||| || ||| ||||||||||||||||    
T  21541984 cggatacggacacggacaccagacacgacacagacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaattac 21542075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 14674249 - 14674314
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||||||    
T  14674249 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattac 14674314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 39698524 - 39698586
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||    
T  39698524 acggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattac 39698586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 386
Target Start/End: Original strand, 19579645 - 19579746
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||||||||| | || |||||| || || ||||||||||||| ||||||||||| | |||||||||| ||||||||| |||| |||| ||||    
T  19579645 ctatgaagcacggatacgtacaccgacaccggatacaacacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaatt 19579744  T
Q  385 ac 386  Q
    ||    
T  19579745 ac 19579746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 6401442 - 6401542
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| |||||||||||| || || |||||| ||| |||||||||||| |||||||||||||||| ||   ||| | ||||||||||||| ||||||||||    
T  6401442 ctatgaagcacggatacagacacggacaccggacgcgacacggacaccgacacgccgacacaactaaattttttagaaaatcacaaaatacagtgtaatt 6401541  T
Q  385 a 385  Q
    |    
T  6401542 a 6401542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 19552626 - 19552562
Alignment:
Q  317 acacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||||| |||| ||||||    
T  19552626 acacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaagtgta 19552562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 386
Target Start/End: Original strand, 30183490 - 30183594
Alignment:
Q  282 aacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    ||||||| ||| ||||||||||| |||||||| |||||| | || |||||||| | ||||||||||| ||||||||||||| ||||||  |||| || ||    
T  30183490 aacctatgaaggacggatacggacacagacactagacacaatacagacactgatatgccgacacaactaataatttgaaaatatcacattattcggttta 30183589  T
Q  382 attac 386  Q
    |||||    
T  30183590 attac 30183594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 36642878 - 36642799
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaa 363  Q
    |||||| ||||| ||||||||| | ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||    
T  36642878 acctatgaagcatggatacggaca-agacaccggacacgacacggacactgacacgccgacacagttaataatttgaaaaa 36642799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 24906390 - 24906315
Alignment:
Q  311 caccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| ||||||||||| ||||||||||||| |||||   |||||||||||||||| ||| ||||||||||||||||    
T  24906390 caccggacacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattac 24906315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 31084309 - 31084368
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||| | |||||||||||||||||||| |||||| |||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattac 31084368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 386
Target Start/End: Complemental strand, 6326413 - 6326311
Alignment:
Q  284 cctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||| ||||| ||||| ||| || || ||| |||||||||||||||||||||||||||||   | | |||||||| ||||| ||| |||||||||||||    
T  6326413 cctatgaagcatggataaggacacggataccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaat 6326314  T
Q  384 tac 386  Q
    |||    
T  6326313 tac 6326311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 4105232 - 4105304
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaa--atcacaaaattcagtgtaattac 386  Q
    |||| |||||||| ||||||||||||||| ||| ||||||||||||||  |||||| ||||||||||||||||    
T  4105232 gacatgacacggatactgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattac 4105304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 21576824 - 21576759
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| ||||||| ||||| ||||| | |||||||||||||||||||| ||||||||||||||||    
T  21576824 gacacgaacactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaattac 21576759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 21351979 - 21351919
Alignment:
Q  326 ggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||| |||||||||| ||||||| |||||| ||||| ||||||||||||||||    
T  21351979 ggacactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattac 21351919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 33178014 - 33178070
Alignment:
Q  330 actgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||||    
T  33178014 actgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattac 33178070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 367
Target Start/End: Complemental strand, 19820494 - 19820427
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatca 367  Q
    |||||||| |||||| |||||||||||||||||||||| |||||||  | |||||||||| |||||||    
T  19820494 acggatacggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaatca 19820427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 10298553 - 10298614
Alignment:
Q  325 cggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||| ||| || |||||||||    
T  10298553 cggacactaacacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattac 10298614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 43001780 - 43001845
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||| | ||||||  | |||||||||||||||| ||| ||||||||||||||||    
T  43001780 gacacggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaattac 43001845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 383
Target Start/End: Complemental strand, 15410565 - 15410465
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| || ||||||||||||    |||| ||||||||||||||||||||||||||||||||  | |||||||| | ||||| | |  |||||||||||    
T  15410565 acctatgaaacacggatacggacgtggacatcagacacgacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaa 15410466  T
Q  383 t 383  Q
    |    
T  15410465 t 15410465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 42893345 - 42893405
Alignment:
Q  326 ggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| ||||| |||||||| | |||||||||||||||||||| ||| ||||||||||||    
T  42893345 ggacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattac 42893405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 3966488 - 3966547
Alignment:
Q  326 ggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||| ||||||||  | |||||||||| ||||||||| |||||||||||||||    
T  3966488 ggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaatta 3966547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 15405137 - 15405069
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||| ||||   |||||||| |||||||||||||||||| | |||||| |||||||||    
T  15405137 gacacgacacggacactaacact--gacacaactaataatttgaaaaaatcatataattcaatgtaattac 15405069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 384
Target Start/End: Complemental strand, 16304539 - 16304440
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||||||||| ||||||||| || |||||| |||||||||  || ||||||||||||||||  |  || ||||||| |||||| | |||| |||||||||    
T  16304539 ctataaagcagggatacggacaccgacaccggacacgacatagatactgacacgccgacaccgctgattatttgaataaatcatataatttagtgtaatt 16304440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 30135288 - 30135359
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttg-aaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||| || || |||||||||||||||| ||||||||| ||||||||||| || ||| |||||||||    
T  30135288 gacacgacacagataccgacacgccgacacaactaataatttgaaaaaaatcacataactcattgtaattac 30135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Original strand, 9449448 - 9449510
Alignment:
Q  320 cgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||||||||||| ||||||||||| |  |||||||||| ||||||||| |||||| |||||    
T  9449448 cgacacggacactggcacgccgacaccaataataatttgagaaaatcacataattcaatgtaa 9449510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 14422879 - 14422946
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||| |||||||||||| |||| ||| | ||||||||  |||||||||| |||||||||||||||    
T  14422879 gacacgacaaggacactgacacaccgatacagctaataattt--aaaaatcacataattcagtgtaatta 14422946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 386
Target Start/End: Original strand, 27932203 - 27932280
Alignment:
Q  308 agacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| ||||||||||| ||||| | |||||||||||  | |||||||||| ||||| ||| ||||||||||||||||    
T  27932203 agacacaagacacgacactgacac-gccacgccgacaccgctaataatttgagaaaattacataattcagtgtaattac 27932280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 41633710 - 41633780
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| |||| || |||||||| |||||||| | |||||||||||||| | ||| ||||||||||||||||    
T  41633710 gacaccacacagatactgacactccgacacagctaataatttgaaaaatttacataattcagtgtaattac 41633780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 8420011 - 8420072
Alignment:
Q  325 cggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| ||||||||||||| | | |||||||||||||||| ||| |||||| |||||||||    
T  8420011 cggacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattac 8420072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 20683325 - 20683370
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggaca 330  Q
    |||||||||||||||||||| || |||||| |||||||||||||||    
T  20683325 ctataaagcacggatacggacacggacaccggacacgacacggaca 20683370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 380
Target Start/End: Complemental strand, 40000616 - 40000555
Alignment:
Q  319 acgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgt 380  Q
    |||||||||||||||||| | ||||||    |||||||||||||||||||| ||||||||||    
T  40000616 acgacacggacactgacatgtcgacactcttaataatttgaaaaaatcacataattcagtgt 40000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 43564863 - 43564925
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||| ||||||||||||||||||| |  |||||||| |||||||||| |||| ||||||||||    
T  43564863 gacacgaacactgacacgccgacacatc--ataatttggaaaaatcacataatttagtgtaatta 43564925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 16203898 - 16203810
Alignment:
Q  297 gatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| || |||||||||  ||| |||||||||||| ||| ||||||||  | |||||||||| |||||| || |||| ||||||||||    
T  16203898 gatacagacacagacaccgaacatgacacggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaatta 16203810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 385
Target Start/End: Complemental strand, 22423895 - 22423827
Alignment:
Q  317 acacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||| |||||||| | ||||| || |||||||||| ||||||||| |||||| | ||||||    
T  22423895 acacgacacggatactgacaccctgacactactaataatttgagaaaatcacataattcaatataatta 22423827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 27144443 - 27144507
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| |||||||||||||||||||  | ||||||||||  |||||||| |||| ||||||||||    
T  27144443 gacacagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaatta 27144507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 386
Target Start/End: Original strand, 15883982 - 15884033
Alignment:
Q  336 acgccgacacaacaaataatttgaaaa-aatcacaaaattcagtgtaattac 386  Q
    ||||||||||| |||||||||| |||| ||||||| ||||||||||||||||    
T  15883982 acgccgacacagcaaataatttaaaaaaaatcacataattcagtgtaattac 15884033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 7677703 - 7677749
Alignment:
Q  339 ccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| | |||||||||||||||||||| ||||||||| |||||    
T  7677703 ccgacacagctaataatttgaaaaaatcacataattcagtgcaatta 7677749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 385
Target Start/End: Original strand, 26312731 - 26312813
Alignment:
Q  303 gatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| |||||  ||||||||| ||||||||| | ||||| ||  |||||||||||| |||||||   |||||||||||||||    
T  26312731 gatacggacactggacacgacatggacactgatatgccgataccgcaaataatttgagaaaatcaattaattcagtgtaatta 26312813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 386
Target Start/End: Complemental strand, 22299571 - 22299495
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| || |||||||||| | |||||| |||||||| | |||||||| |||||||||||  ||||||| |||||||    
T  22299571 gacaccggatacgacacggatattgacacaccgacacagctaataattt-aaaaaatcacatgattcagtataattac 22299495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 28588742 - 28588689
Alignment:
Q  332 tgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||    |||||||||| ||||||||| |||||||||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaatta 28588689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 385
Target Start/End: Original strand, 40131624 - 40131665
Alignment:
Q  344 acaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| |||||||||||||||||||| |||||||| ||||||    
T  40131624 acaactaataatttgaaaaaatcacataattcagtttaatta 40131665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 2436908 - 2436956
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattc 375  Q
    |||||||||||||||||||  | ||||||||| |||||||||| |||||    
T  2436908 gacactgacacgccgacaccgctaataatttgcaaaaatcacataattc 2436956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 320
Target Start/End: Original strand, 19490533 - 19490573
Alignment:
Q  280 agaacctataaagcacggatacggatacagacaccagacac 320  Q
    ||||||||| |||||||||||||||||| |||||| |||||    
T  19490533 agaacctattaagcacggatacggataccgacaccggacac 19490573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 23016106 - 23016054
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacac 337  Q
    |||| ||||||||||||||| || ||| || |||||||||||||||| |||||    
T  23016106 ctatgaagcacggatacggacacggactccggacacgacacggacaccgacac 23016054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 385
Target Start/End: Complemental strand, 25888411 - 25888308
Alignment:
Q  284 cctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataattt--gaaaaaatcacaaaattcagtgta 381  Q
    ||||| |||||||||| | || || |||||  ||||||||||||| || ||||| || |||| || ||||||||   ||||||||| | |||||||||||    
T  25888411 cctatgaagcacggatccagacacggacacaggacacgacacggatacagacacaccaacactactaataattttaaaaaaaatcatataattcagtgta 25888312  T
Q  382 atta 385  Q
    ||||    
T  25888311 atta 25888308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 7e-28; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 24339596 - 24339687
Alignment:
Q  295 cggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||| |||||| ||||||||| ||||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  24339596 cggatacggatacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattac 24339687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 286 - 385
Target Start/End: Original strand, 26733249 - 26733348
Alignment:
Q  286 tataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||  | |||||||||| ||||||||| |||||||| ||||||    
T  26733249 tataaagcacggaaacggataccgacaccagacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaatta 26733348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 300 - 386
Target Start/End: Original strand, 27945000 - 27945086
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| |||||| |||||||||||||||||||||||||||||| || |||||||||| ||||| ||| ||||||||||||||||    
T  27945000 acggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattac 27945086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 5409951 - 5409850
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| |||||||||||| || ||||||||| || |||||| |||||||||||||| || ||| | |||||||||||||||||||| ||||||||| ||||    
T  5409951 ctatgaagcacggatacagacacagacaccggatacgacatggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaatt 5409852  T
Q  385 ac 386  Q
    ||    
T  5409851 ac 5409850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 285 - 386
Target Start/End: Original strand, 25481846 - 25481947
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| |||||||||||| || || |||| | ||||| ||| ||||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||    
T  25481846 ctatgaagcacggatacagacacggacatcggacacaacatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 25481945  T
Q  385 ac 386  Q
    ||    
T  25481946 ac 25481947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 11061186 - 11061090
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||| || |||| | || ||||||||||||||||||| |||||||| | |||||||||||||||||||| |||| ||| |||||||    
T  11061186 aagcacggatacggacacggacatcggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattac 11061090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 284 - 384
Target Start/End: Original strand, 30730980 - 30731080
Alignment:
Q  284 cctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||| |||||| |||||||| || |||||||||||||||||  ||| || |||||||||||  | |||||||||| ||||||||| |||||||||||||    
T  30730980 cctatgaagcacagatacggacacggacaccagacacgacacatacagtggcacgccgacaccgcgaataatttgagaaaatcacataattcagtgtaat 30731079  T
Q  384 t 384  Q
    |    
T  30731080 t 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 13770666 - 13770736
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||| ||||||||||| | |||||||| ||||||| ||| ||||||||||||||||    
T  13770666 gacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattac 13770736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 24105653 - 24105723
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||  ||  |||||||||||||||    
T  24105653 gacacgacacggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattac 24105723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 386
Target Start/End: Complemental strand, 32094121 - 32094034
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaa-aaaatcacaaaattcagtgtaattac 386  Q
    |||||||| ||||| |||||||||||  ||||| ||| ||| ||||||| ||||||||||| ||||||||| ||||||||||||||||    
T  32094121 acggatacggacacaagacacgacacaaacactaacatgccaacacaactaataatttgaaaaaaatcacataattcagtgtaattac 32094034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 300 - 386
Target Start/End: Original strand, 33994171 - 33994257
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| |||||  ||||||||||| |||||||||||||||| |||| | |||||||||||  ||||| ||||||||| ||||||    
T  33994171 acggatacggacacttgacacgacacgaacactgacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattac 33994257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 316 - 382
Target Start/End: Complemental strand, 43027553 - 43027487
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    ||||||||||||||||||||||| |||| || | |||||||||||||||||||| ||| ||||||||    
T  43027553 gacacgacacggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaa 43027487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 22868017 - 22868086
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| |||| ||||||||||||||||||| || |||||| ||| ||||||||| |||||||||||||||    
T  22868017 gacacaacaccgacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaatta 22868086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 384
Target Start/End: Original strand, 35861907 - 35862007
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacac------gccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    |||||||||||||||  | |||||| |||||||||| |||||| ||||      ||||||||||| |||||||||||||||||||| |||||| ||||||    
T  35861907 aagcacggatacggacgcggacaccggacacgacacagacactaacactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaat 35862006  T
Q  384 t 384  Q
    |    
T  35862007 t 35862007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 22602825 - 22602725
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||| ||||||||||| || | ||||  ||||||||| | |||||||||||||||||   |||| |||||| ||||||||| ||||||||||||||    
T  22602825 ctatgaaggacggatacggacacgggcacctaacacgacacaggcactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaatt 22602726  T
Q  385 a 385  Q
    |    
T  22602725 a 22602725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 386
Target Start/End: Complemental strand, 29763280 - 29763188
Alignment:
Q  294 acggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||| | |||||||||  ||||||||  ||||||||||| || |||||||  ||||||||||||||||||| |||| |||||| ||||    
T  29763280 acggatacgaacacagacaccgaacacgacatagacactgacacaccaacacaacttataatttgaaaaaatcacataattaagtgtagttac 29763188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 1433395 - 1433482
Alignment:
Q  282 aacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcaca 369  Q
    ||||||| ||||||||||||||  || ||||||  |||||||||||||| ||||||||||||||    |||||||||| |||||||||    
T  1433395 aacctatgaagcacggatacgggcacggacaccgaacacgacacggacattgacacgccgacaccgttaataatttgagaaaatcaca 1433482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 9408407 - 9408348
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||| |||||||||  |||||||||||||||||||| |||| |||||||||||    
T  9408407 gacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattac 9408348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 385
Target Start/End: Complemental strand, 18213151 - 18213048
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaac-aaataatttgaaaaaatcacaaaattcagtgta 381  Q
    |||||| |||||| |||||| | ||  ||||||||||||||||||||||||| ||||||||||||| || |  ||| | ||||||||| |||| ||||||    
T  18213151 acctatgaagcacagatacgaacacgaacaccagacacgacacggacactgatacgccgacacaactaattttttttagaaaatcacataatttagtgta 18213052  T
Q  382 atta 385  Q
    ||||    
T  18213051 atta 18213048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 385
Target Start/End: Complemental strand, 21141092 - 21140997
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||| || ||||||  ||||||||||||| | |||||| |||||| || |||||||| | ||||||| | |||||||||| ||||    
T  21141092 aagcacggatacggacacggacaccgtacacgacacggacgccgacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgatta 21140997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 386
Target Start/End: Complemental strand, 13557835 - 13557755
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataattt---gaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| |||| ||||| |||||||||||||||||| ||| ||||||||    ||||||||||| ||||||||||||||||    
T  13557835 gacaccggacatgacacagacactgacacgccgacaaaactaataatttaaaaaaaaaatcacataattcagtgtaattac 13557755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 21826241 - 21826315
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||||||||||||||  |||||| |||||||||||| || |||||||| ||||||||||| || ||||| ||||    
T  21826241 gacaccagacacgacatagacactaacacgccgacacgactaataatttaaaaaaatcacataactcagtctaat 21826315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 384
Target Start/End: Original strand, 32308105 - 32308163
Alignment:
Q  326 ggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    ||||||||||||||||||||  | |||||||||| ||||||||| ||||||||||||||    
T  32308105 ggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 32308163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 11665508 - 11665455
Alignment:
Q  332 tgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| |||||||| |||||||||||||||||||| |||||||| ||||||    
T  11665508 tgacacgctgacacaactaataatttgaaaaaatcacataattcagtctaatta 11665455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 377
Target Start/End: Complemental strand, 11722182 - 11722121
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcag 377  Q
    ||||||||||||||||||||||||||||||  | || ||||||| ||||||||| |||||||    
T  11722182 gacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 18215265 - 18215200
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||| |||||||||| || | |||||||||||||||||||| ||| ||||||| ||||    
T  18215265 gacacggacactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttac 18215200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 19206021 - 19206094
Alignment:
Q  312 accagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||||||||  ||||||||||||  | |||||||||| ||||||||| |||||| | ||||||    
T  19206021 accagacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataatta 19206094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 385
Target Start/End: Complemental strand, 26329498 - 26329397
Alignment:
Q  284 cctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||| ||||||| |||| || || |||||  |||||||||| ||||||||||||||||||     |||||||||| |||| |||| |||||||||||||    
T  26329498 cctatgaagcacgaatacagacacggacactggacacgacacagacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaat 26329399  T
Q  384 ta 385  Q
    ||    
T  26329398 ta 26329397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 9778452 - 9778504
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacac 337  Q
    |||| ||||||||||||||| || |||||| ||||||||||||||||||||||    
T  9778452 ctatgaagcacggatacggacacggacaccggacacgacacggacactgacac 9778504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 43249961 - 43250037
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||| |||| |||||||||||||||||||||||||    |||||||||| ||||| ||| ||| |||||||||||    
T  43249961 gacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaatta 43250037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 386
Target Start/End: Original strand, 3991322 - 3991369
Alignment:
Q  339 ccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||| |||||||||||||||||||| |||||||| |||||||    
T  3991322 ccgacacaactaataatttgaaaaaatcacataattcagtataattac 3991369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 8234132 - 8234191
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| ||||| |||||||||| |||||||||||||||| ||| ||||||||||| ||||    
T  8234132 gacacagacacaccgacacaactaataatttgaaaaaataacataattcagtgtagttac 8234191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 385
Target Start/End: Complemental strand, 18013160 - 18013089
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||| ||||||||||||||||||  | ||||| || |||||||| ||||||| ||| |||||||||||||||    
T  18013160 cagaaacgacacggacactgacattctgacactactaataatttaaaaaaattacataattcagtgtaatta 18013089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 29787447 - 29787384
Alignment:
Q  322 acacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||| | ||||||||||||  | |||||||||| ||||||||| |||||||||||||||    
T  29787447 acacggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatta 29787384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 6630985 - 6630927
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||||||| || |||||||||| ||| ||||  |||||||||||||||    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaatta 6630927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 7438693 - 7438751
Alignment:
Q  328 acactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||| |||||||||   |||||||||||||||||||| |||||| |||||||||    
T  7438693 acactgacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaattac 7438751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 10042915 - 10042981
Alignment:
Q  319 acgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||| |||||||||||| || |||||||||| ||| ||||| |||| || |||||||    
T  10042915 acgacacggacacttacacgccgacaccactaataatttgataaattcacataatttagcgtaatta 10042981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 23191879 - 23191941
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||| ||||||||||  | |||||||||| ||||||||| | ||||||||||||||    
T  23191879 acggacactgatacgccgacaccgctaataatttgagaaaatcacatatttcagtgtaattac 23191941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 40287428 - 40287371
Alignment:
Q  328 acactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| |||||||||||||||| ||||||||||||||||||  | |||||||||||||||    
T  40287428 acacggacacgccgacacaacgaataatttgaaaaaatca-tatattcagtgtaattac 40287371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 386
Target Start/End: Original strand, 21864765 - 21864853
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttg--aaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||| ||| | |||||||||||||||| ||||| | |||||| | |||||||||  ||||||||| | |||| |||||||||||    
T  21864765 acggatacacacatcggacacgacacggacacggacacacggacacagctaataatttgaaaaaaaatcatataatttagtgtaattac 21864853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 25822647 - 25822700
Alignment:
Q  333 gacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||| |||||||||||||||   || ||||||||||||||||    
T  25822647 gacacgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattac 25822700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 41020483 - 41020540
Alignment:
Q  328 acactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||| ||||||||| ||||||||  |||||||||| |||| ||||||||||    
T  41020483 acactgacacgtcgacacaactaataatttacaaaaatcacataatttagtgtaatta 41020540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 11272659 - 11272600
Alignment:
Q  329 cactgacacgccgacacaacaaataatttgaaaaaatcac--aaaattcagtgtaattac 386  Q
    |||||| |||||||||||||  ||||||||||||||||||  | ||||||||||||||||    
T  11272659 cactgagacgccgacacaactgataatttgaaaaaatcacatataattcagtgtaattac 11272600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 15680789 - 15680853
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||| ||||||||||||||||||| | | |||||||  ||||||||||| |||| ||||||||||    
T  15680789 gacatggacactgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaatta 15680853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 17851375 - 17851475
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| |||||||||||| || || |||||| ||||||||| ||| || |||||  ||| ||  | |||||||| | ||||||||| ||||||||||||||    
T  17851375 ctatgaagcacggatacagacacggacaccggacacgacatggataccgacacatcgataccgctaataattttagaaaatcacataattcagtgtaatt 17851474  T
Q  385 a 385  Q
    |    
T  17851475 a 17851475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 26033511 - 26033475
Alignment:
Q  350 aataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||| ||||||||||||||||    
T  26033511 aataatttgaaaaaatcacataattcagtgtaattac 26033475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 5835233 - 5835291
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| |||||||||| || |||| ||||| ||||| ||| |||||||||||||||    
T  5835233 gacactgatacgccgacaccactaatagtttgagaaaataacataattcagtgtaatta 5835291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 386
Target Start/End: Original strand, 11831431 - 11831477
Alignment:
Q  340 cgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||| |||||||||||||||||| | |||| |||||||||||    
T  11831431 cgacacaactaataatttgaaaaaatcatataatttagtgtaattac 11831477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 9482917 - 9482978
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||| ||||||   |  ||||||||| ||||||||| |||||||||||||||    
T  9482917 acggacactgacacaccgacatcgctgataatttgagaaaatcacacaattcagtgtaatta 9482978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 13300410 - 13300455
Alignment:
Q  341 gacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| ||| |||||||||||||||||| | ||||||||||||||||    
T  13300410 gacataactaataatttgaaaaaatcatataattcagtgtaattac 13300455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 20549778 - 20549835
Alignment:
Q  328 acactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||| |||||||  | |||||||||| ||||||||  |||||||||||||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaatta 20549835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 2425830 - 2425754
Alignment:
Q  303 gatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtg 379  Q
    |||||||||||  |||||||||| || |||||||||||| |||    |||||||||| ||||||||| |||| ||||    
T  2425830 gatacagacactggacacgacacagatactgacacgccggcaccgttaataatttgagaaaatcacataattaagtg 2425754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 5307233 - 5307293
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaatt 374  Q
    ||||||||| || |||| |||||||||||||| ||  ||||||||| ||||||||| ||||    
T  5307233 cagacacgatacagacattgacacgccgacaccacttataatttgagaaaatcacataatt 5307293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 386
Target Start/End: Complemental strand, 7197375 - 7197311
Alignment:
Q  322 acacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| |||| ||||||||||||||| | |||||||| |||||||||   |||||| |||||||||    
T  7197375 acacagacattgacacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattac 7197311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 13585275 - 13585327
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaa 361  Q
    |||||||||||||| |  |||||||||| ||||||||| | ||||||||||||    
T  13585275 gacaccagacacgatattgacactgacatgccgacacagctaataatttgaaa 13585327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 21560484 - 21560548
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaa-----aaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||| ||| | |||||||||||     ||||||||| ||||||||||||||||    
T  21560484 gacactgacacgccgatacagctaataatttgaagaaaaaaaatcacataattcagtgtaattac 21560548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 280 - 386
Target Start/End: Original strand, 8737 - 8843
Alignment:
Q  280 agaacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtg 379  Q
    ||||||||| ||||| ||||||||| || |||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||| |  ||| ||||    
T  8737 agaacctatgaagcatggatacggacacggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtg 8836  T
Q  380 taattac 386  Q
    |||||||    
T  8837 taattac 8843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 46625 - 46727
Alignment:
Q  284 cctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||| ||||||||||||||| || |||| | ||||||||||||||| |||||||||||||||   |||||||||||||||||||| |||||||||||||    
T  46625 cctatgaagcacggatacggacacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaat 46724  T
Q  384 tac 386  Q
    |||    
T  46725 tac 46727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 572 - 476
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||| || ||||||  ||||| |||||||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  572 aagcacggatacggacacggacaccgaacacgccacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattac 476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 15972838 - 15972918
Alignment:
Q  306 acagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||    
T  15972838 acagacaccagatacgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattac 15972918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 290 - 385
Target Start/End: Original strand, 21616711 - 21616806
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||| ||||||||  |||||||||||||||| |||||||||||||  | |||||||||| ||||||||| |||||||||||||||    
T  21616711 aagcacggatacggacacagacacatgacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatta 21616806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 386
Target Start/End: Complemental strand, 19536495 - 19536411
Alignment:
Q  303 gatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaa-aaaatcacaaaattcagtgtaattac 386  Q
    ||||| |||||| ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||    
T  19536495 gatacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattac 19536411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 285 - 386
Target Start/End: Original strand, 30335361 - 30335462
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||||||||||| || ||   |||||||||||||||||||  |||||||||||||| |||||||||||||||| ||| |||| |||||||||    
T  30335361 ctatgaagcacggatacggacacggatctcagacacgacacggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaatt 30335460  T
Q  385 ac 386  Q
    ||    
T  30335461 ac 30335462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 12941021 - 12940949
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||||||  |||||||| |||||||||||||||||| | ||||||||||||||||    
T  12941021 cagacacgacacggacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaattac 12940949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 15657834 - 15657909
Alignment:
Q  311 caccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| ||||||||||||||||| |||||||||| |||| ||||||||| |||||||||| ||||||||||||||||    
T  15657834 caccggacacgacacggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattac 15657909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 386
Target Start/End: Complemental strand, 20539774 - 20539688
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| |||||  ||||||||||||||||||||||| ||||||| | |||||||||||||||||| | |||| |||||||||||    
T  20539774 acggatacggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattac 20539688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 385
Target Start/End: Complemental strand, 34785099 - 34784997
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| |||||| |||||||| || ||| ||||||||||||||||||||||||| |||||||||| |||  ||| | ||||||||| |||| |||||||    
T  34785099 acctatgaagcacagatacggacacggaccccagacacgacacggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaa 34785000  T
Q  383 tta 385  Q
    |||    
T  34784999 tta 34784997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 37419727 - 37419788
Alignment:
Q  325 cggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  37419727 cggacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattac 37419788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 18421941 - 18422008
Alignment:
Q  319 acgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||||||||||  |||||||| |||| |||||| ||||||||||||||||    
T  18421941 acgacacggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattac 18422008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 18841097 - 18841027
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||||| ||| |||| |||||||||||    
T  18841097 gacacgacatggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattac 18841027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 30404934 - 30404864
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| |||||||||||||||||||||||||    |||||||||||||||||||| ||||||||||||||||    
T  30404934 gacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattac 30404864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 21374809 - 21374713
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||||||||||| || ||||||      |||||||||||| ||||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  21374809 ctatgaagcacggatacggacacggacacc-----ggacacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatt 21374715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 385
Target Start/End: Complemental strand, 21782914 - 21782833
Alignment:
Q  304 atacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||  ||||||||||  ||||||||||||||||||  | |||||||||| ||||||||| |||||||||||||||    
T  21782914 atacagacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaatta 21782833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 23058553 - 23058456
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaa-aaaatcacaaaattcagtgtaattac 386  Q
    ||||||||| ||||| || || ||| ||||||||||||||| ||||||||| ||||||  ||||||||||| ||||||||| ||| ||||||||||||    
T  23058553 aagcacggacacggacacggatacctgacacgacacggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattac 23058456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 37558957 - 37559022
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||||||| | ||||||||| |||||||||| |||||| |||||||||    
T  37558957 gacacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattac 37559022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 28412294 - 28412394
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||| ||| ||| || |||||||||||||||||||||||| ||||| | ||||    |||||||||| ||||||||| ||||||||||||||    
T  28412294 ctatgaagcacgaatatggacacggacaccagacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaatt 28412393  T
Q  385 a 385  Q
    |    
T  28412394 a 28412394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 385
Target Start/End: Complemental strand, 20242813 - 20242742
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||| ||||||||||||||||||||||| |||  ||| | ||||||||| |||||||||||||||    
T  20242813 cagacacgacatggacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaatta 20242742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 322 - 385
Target Start/End: Original strand, 24894370 - 24894433
Alignment:
Q  322 acacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||||| ||||||||| |||||    
T  24894370 acacggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaatta 24894433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 2438831 - 2438733
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||||||||||| || |||||| ||||  ||||||||||||||  || |||||| | |||||||| ||||||||||| ||||||||||||||    
T  2438831 ctatgaagcacggatacggacac-gacaccggacaaaacacggacactgac--gctgacacagctaataatttcaaaaaatcacataattcagtgtaatt 2438735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 300 - 386
Target Start/End: Original strand, 6940214 - 6940300
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| |||| || | |||||||||||||||||||||||||||| | |||||||| ||||| | ||| |||| |||||||||||    
T  6940214 acggatacggacatcaaatacgacacggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattac 6940300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 320 - 386
Target Start/End: Complemental strand, 30717610 - 30717544
Alignment:
Q  320 cgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||  |||||| | | |||||||||||||||||||| ||||||||||||||||    
T  30717610 cgacacggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattac 30717544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 319 - 385
Target Start/End: Complemental strand, 36756425 - 36756359
Alignment:
Q  319 acgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||| |||||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||||    
T  36756425 acgacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaatta 36756359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 385
Target Start/End: Original strand, 23717986 - 23718070
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||  |||| ||||||||||||||||| |||||||  | |||||||||| ||| ||||| |||||||||||||||    
T  23717986 acggatacagacacg-gacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaatta 23718070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 385
Target Start/End: Original strand, 24105658 - 24105742
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||  |||| ||||||||||||||||| |||||||  | |||||||||| ||| ||||| |||||||||||||||    
T  24105658 acggatacagacacg-gacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaatta 24105742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 20473295 - 20473367
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| |||||| |||||||||| ||||||||||| |||||||| ||||| ||| | ||||||||||||||||    
T  20473295 cagactcgacacagacactgacatgccgacacaactaataatttaaaaaactcatataattcagtgtaattac 20473367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 12668493 - 12668438
Alignment:
Q  330 actgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||| ||| |||||||||||||||| ||| |||||||||||||||    
T  12668493 actgacacgccgacataactaataatttgaaaaaatgacataattcagtgtaatta 12668438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 385
Target Start/End: Original strand, 18276470 - 18276565
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||| || || |||||| ||||||| || |||||||| | ||||||||  | |||||||||| ||||||||  |||||||||||||||    
T  18276470 aagcacggatacagacacggacaccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaatta 18276565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 38117232 - 38117173
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||| | |||||||||||||||||||| | ||| ||||||||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattac 38117173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 337
Target Start/End: Original strand, 44860277 - 44860324
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacac 337  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  44860277 aagcacggatacggatacgtacaccagacacgacacggacactgacac 44860324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 301 - 386
Target Start/End: Original strand, 21624226 - 21624312
Alignment:
Q  301 cggatacagacaccagacacgacacggacactgacacgccgacacaacaaataa-tttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||| ||||||  ||||||||| |||||||||||||||||||| | ||||| ||| |||||||  || ||||||||||||||||    
T  21624226 cggatacggacaccgaacacgacacagacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattac 21624312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 14996310 - 14996237
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaa-aaaatcacaaaattcagtgtaattac 386  Q
    |||||| |||||||||||||||| ||||||||| | ||||||||||| ||||||| | |||| |||||||||||    
T  14996310 cagacatgacacggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattac 14996237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 385
Target Start/End: Complemental strand, 16069353 - 16069269
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| ||||| ||| | |||||||||||||||||||||||||    |||||||| ||||||||| | |||||||||||||||    
T  16069353 acggatacggacac-agatatgacacggacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaatta 16069269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 11223949 - 11223877
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| |||| |||||| ||||||| |||||| | |||| ||||||||||| ||| ||||||||||||||||    
T  11223949 cagacatgacatggacacagacacgctgacacagctaatattttgaaaaaataacataattcagtgtaattac 11223877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 26769458 - 26769539
Alignment:
Q  282 aacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcaca 369  Q
    ||||||| ||||||||||||||| || |||||| |||||||||| ||||      |||||||||||| ||||||||||||| ||||||    
T  26769458 aacctatgaagcacggatacggacacggacaccggacacgacacagaca------cgccgacacaactaataatttgaaaatatcaca 26769539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 28677889 - 28677953
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||| |||||||  ||||||||||  | |||||||||||||||||||| |||||||||||||||    
T  28677889 gacactgacactggaacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatta 28677953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 31283992 - 31284092
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| |||||| |||||||| || |||||| ||||  ||||| ||||| ||||||||||||  | |||||||||| ||||||||| ||| || |||||||    
T  31283992 ctatgaagcacagatacggacacggacaccggacataacacgtacacttacacgccgacactgctaataatttgagaaaatcacataatccattgtaatt 31284091  T
Q  385 a 385  Q
    |    
T  31284092 a 31284092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 385
Target Start/End: Complemental strand, 36409713 - 36409642
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||| ||| ||| ||||||||  |  ||||||||||||||||||| |||| ||||||||||    
T  36409713 cagacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcacataatttagtgtaatta 36409642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 4142953 - 4142895
Alignment:
Q  287 ataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacac 345  Q
    ||||| ||||||| ||||||| ||||||  ||||||| |||||||||||||||||||||    
T  4142953 ataaaacacggattcggatacggacaccgaacacgacccggacactgacacgccgacac 4142895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 375
Target Start/End: Original strand, 11670711 - 11670789
Alignment:
Q  297 gatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattc 375  Q
    ||||||||||| ||||||  | ||||||  |||||||||||| |||| | || |||||||||||||||||||| |||||    
T  11670711 gatacggatacggacaccgaatacgacatagacactgacacgtcgacgccactaataatttgaaaaaatcacataattc 11670789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 34337283 - 34337202
Alignment:
Q  293 cacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaatt 374  Q
    |||||||||||| || || |||  | |||||||||||| |||||||||||||||    ||||||||||||||||||| ||||    
T  34337283 cacggatacggacacggataccgtatacgacacggacattgacacgccgacacagttgataatttgaaaaaatcacataatt 34337202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 39323244 - 39323309
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||| ||| ||||||  | |||||||||| ||||| ||| ||||||||||||||||    
T  39323244 gacacggacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaattac 39323309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 385
Target Start/End: Complemental strand, 27286378 - 27286307
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||| ||||||||||| |||||||||   | |||||||||| || |||||| |||| ||||||||||    
T  27286378 cagacacgatacggacactgatacgccgacaacgctaataatttgataagatcacataattaagtgtaatta 27286307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 384
Target Start/End: Original strand, 27460011 - 27460070
Alignment:
Q  326 ggacactgacacgccgacacaacaaataatttg-aaaaaatcacaaaattcagtgtaatt 384  Q
    ||||||||||||||||||||| | ||||||||| ||||||| ||| |||||||| |||||    
T  27460011 ggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtataatt 27460070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 386
Target Start/End: Original strand, 974746 - 974792
Alignment:
Q  340 cgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||| ||||||||||||| ||||||  |||||||||||||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattac 974792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 31808063 - 31808121
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||| |||||||  | |||||||| | ||||||||| |||||||||||||||    
T  31808063 gacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaatta 31808121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 33153415 - 33153469
Alignment:
Q  332 tgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||| ||| | ||| |||| ||||||||||| ||||||||||||||||    
T  33153415 tgacacgccgaaacatctaatgatttaaaaaaatcacataattcagtgtaattac 33153469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 2331773 - 2331834
Alignment:
Q  320 cgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    ||||||||||| ||||||||  |||| |  |||||||||| ||||||||| |||||||||||    
T  2331773 cgacacggacattgacacgcaaacaccattaataatttgagaaaatcacataattcagtgta 2331834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 29367443 - 29367383
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaa-tcacaaaattcagtgtaattac 386  Q
    ||||| ||||||||| |||||  |||||||| |||||| ||||| ||||||||||||||||    
T  29367443 gacacggacacgccggcacaattaataattttaaaaaaatcacataattcagtgtaattac 29367383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 31018558 - 31018634
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||| || |||||| ||||||||||||||| ||||  | |||||||| | |||||||||  ||| ||||||||||    
T  31018558 gacaccggatacgacatggacactgacacgccaacaccgctaataatttcagaaaatcacatgatttagtgtaatta 31018634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 35449489 - 35449557
Alignment:
Q  317 acacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||  ||||||||| ||| ||||    |||||||||| ||||||||| |||||||||||||||    
T  35449489 acacgacacaaacactgacaagccaacactgttaataatttgagaaaatcacagaattcagtgtaatta 35449557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 386
Target Start/End: Original strand, 20134 - 20217
Alignment:
Q  303 gatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| |||||| ||||||||||||||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  20134 gatacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattac 20217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 300 - 386
Target Start/End: Complemental strand, 178919 - 178832
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatca-caaaattcagtgtaattac 386  Q
    |||||||  |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||    
T  178919 acggatattgacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattac 178832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 192335 - 192263
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||| ||||||||||||||||||||||    |||||||||| ||||| ||| ||||| ||||||||||    
T  192335 cagacacgatacggacactgacacgccgacaccgttaataatttgagaaaattacataattcggtgtaattac 192263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 382
Target Start/End: Complemental strand, 10335401 - 10335304
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||| ||||||||||||| | || |||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | || |||||||    
T  10335401 ctatgaagcacggatacgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaa 10335304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 15796409 - 15796308
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||||||| ||| || |||||| ||||||||||||||| |||||||||||||||   |||||||||||||||||| | ||||||||||||||    
T  15796409 ctatgaagcacggatatggacacggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaatt 15796310  T
Q  385 ac 386  Q
    ||    
T  15796309 ac 15796308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 382
Target Start/End: Complemental strand, 16000126 - 16000034
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    ||||||||||||||| || ||||||  ||||||||| |||||||||||||||||||||| |||||||| ||||||| ||| ||||||||||||    
T  16000126 aagcacggatacggacacggacaccgaacacgacacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaa 16000034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 303 - 386
Target Start/End: Original strand, 55401037 - 55401120
Alignment:
Q  303 gatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| |||||| || |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||| |||||||||||    
T  55401037 gatacggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattac 55401120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 283 - 375
Target Start/End: Complemental strand, 750736 - 750643
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacac-tgacacgccgacacaacaaataatttgaaaaaatcacaaaattc 375  Q
    |||||| ||||||||||||||| || |||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||| |||||    
T  750736 acctatgaagcacggatacggacacggacaccggacacgacacggacacttgacacggcgacacaactaataatttgaaaatatcacataattc 750643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 285 - 382
Target Start/End: Complemental strand, 3164140 - 3164043
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||| |||||||||||| || || |||||| ||||||||||||||| || |||| ||||||| | |||||||||||||||||||| ||||||||||||    
T  3164140 ctatgaagcacggatacagacacggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 28917969 - 28918046
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| ||||||||||||| ||||||||||||||| | | |||||||||||||||||||| ||||||||||||||||    
T  28917969 gacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattac 28918046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 303 - 386
Target Start/End: Complemental strand, 8587118 - 8587035
Alignment:
Q  303 gatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| |||||| |||| |||||||||||||||||||||||||| | | |||||||||||||||||| |||| |||||||||||    
T  8587118 gatacggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattac 8587035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 20503451 - 20503510
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  20503451 gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattac 20503510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 386
Target Start/End: Complemental strand, 35994854 - 35994752
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| ||||||||||||||| |  |||||| ||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||| ||||||||||||    
T  35994854 acctatgaagcacggatacggacatggacaccggacacgacatggacaatgacaagccgacacagctaataatttga-aaaatcacataattcagtgtaa 35994756  T
Q  383 ttac 386  Q
    ||||    
T  35994755 ttac 35994752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 10954932 - 10954994
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  10954932 gacacgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaat 10954994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 26492289 - 26492219
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||||||| | ||||||||||||||||    
T  26492289 gacacgacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattac 26492219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 14216865 - 14216937
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| |||| |||| | ||||||||||||||||    
T  14216865 cagacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattac 14216937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 14222994 - 14223066
Alignment:
Q  314 cagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| |||| |||| | ||||||||||||||||    
T  14222994 cagacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattac 14223066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 21479104 - 21479164
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattact 387  Q
    |||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattact 21479164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 386
Target Start/End: Original strand, 7171444 - 7171546
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||||| |   ||||||| |||||||| | ||||| ||||||    
T  7171444 acctatgaagcacggatacggacacagacaccggacacgacacggatactgacatgccgacacagcttgtaatttg-aaaaatcatataattcggtgtaa 7171542  T
Q  383 ttac 386  Q
    ||||    
T  7171543 ttac 7171546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 4987363 - 4987305
Alignment:
Q  328 acactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattac 4987305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 385
Target Start/End: Complemental strand, 24205157 - 24205056
Alignment:
Q  284 cctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    ||||| ||||||||| || || || |||||| ||||||||||||||||||||||||||||||    |||||||||| ||||| ||| ||| |||||||||    
T  24205157 cctatgaagcacggacacagacacggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaat 24205058  T
Q  384 ta 385  Q
    ||    
T  24205057 ta 24205056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 385
Target Start/End: Original strand, 25064868 - 25064953
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||| |||||||||| |||||||||| |||| ||||||||||||||  | ||| |||||||||||||||| |||| ||||||||||    
T  25064868 acgggtacagacaccggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaatta 25064953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 34910309 - 34910362
Alignment:
Q  333 gacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  34910309 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattac 34910362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 386
Target Start/End: Complemental strand, 41961741 - 41961664
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| |||||||||| ||||||||||||||| |||||| ||||||||||||| ||||||  |||| ||||||||||    
T  41961741 gacaccggacacgacacagacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattac 41961664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 384
Target Start/End: Original strand, 14979156 - 14979224
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    ||||||||| ||||| || |||||||||||| | |||||||||||||||||||| ||||||||||||||    
T  14979156 gacacgacaaggacaatggcacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 319 - 386
Target Start/End: Complemental strand, 10268567 - 10268500
Alignment:
Q  319 acgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| |||||||||||||||||||||   |||||||||||||||||||| |||| |||||||||||    
T  10268567 acgacatggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattac 10268500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 386
Target Start/End: Original strand, 14747511 - 14747607
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttg-aaaaaatcacaaaattcagtgtaat 383  Q
    |||| |||||||||||||||||| |||||| |||||||||      |||||||||||||||| | ||||||||| ||||||||||| |||| ||||||||    
T  14747511 ctatgaagcacggatacggatacggacaccggacacgaca------ctgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaat 14747604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 26508085 - 26508155
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||| || || |||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||    
T  26508085 gacacgatacagatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattac 26508155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 8383232 - 8383301
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||||| ||||||||||||||  | |||||||||| ||||||| | |||||||||||||||    
T  8383232 gacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaatta 8383301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 14209105 - 14209158
Alignment:
Q  333 gacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||||||||    
T  14209105 gacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattac 14209158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 11665888 - 11665988
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||||| ||| ||||||||||||| ||||||||||  ||||| |||| ||||||   | |||||||||| ||||||||| |||| |||||||||    
T  11665888 ctatgaagcacgaatatggatacagacaccggacacgacacacacactaacacaccgacaacgctaataatttgataaaatcacacaatttagtgtaatt 11665987  T
Q  385 a 385  Q
    |    
T  11665988 a 11665988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 25093446 - 25093546
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||| ||||||||  | ||||||||| |||||||||| |||||| ||||||||||||    ||| |||||| ||||||||| ||||||||||||||    
T  25093446 ctatgaagtacggatacaaacacagacaccggacacgacactgacactaacacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaatt 25093545  T
Q  385 a 385  Q
    |    
T  25093546 a 25093546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 385
Target Start/End: Complemental strand, 25948966 - 25948902
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||| ||||| ||  | |||||||||||||||||||| |||||||||||||||    
T  25948966 gacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaatta 25948902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 386
Target Start/End: Complemental strand, 4991084 - 4990981
Alignment:
Q  283 acctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| || |||| ||||||| || ||||||  |||||||||||| |||||||| |||||||  | |||| ||||| ||||| ||| ||||||||||||    
T  4991084 acctatgaaacacgtatacggacacggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaa 4990985  T
Q  383 ttac 386  Q
    ||||    
T  4990984 ttac 4990981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 382
Target Start/End: Complemental strand, 2620137 - 2620071
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||||| ||||||||||||||||||||| || ||| |||||| ||||||||| |||| |||||||    
T  2620137 gacacgactcggacactgacacgccgacaccactaatcatttgagaaaatcacataattaagtgtaa 2620071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 28812499 - 28812560
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  28812499 acggacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttac 28812560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 385
Target Start/End: Complemental strand, 11493441 - 11493376
Alignment:
Q  320 cgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||| ||||||| |||||| || |||||| ||| ||||||||| |||||||||||||||    
T  11493441 cgacacggacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaatta 11493376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 367
Target Start/End: Complemental strand, 12674595 - 12674534
Alignment:
Q  306 acagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatca 367  Q
    ||||||||||||||||||||||||| |||||| |||||||  | |||||||||| |||||||    
T  12674595 acagacaccagacacgacacggacattgacacaccgacactgctaataatttgagaaaatca 12674534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 14829658 - 14829734
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| |||| ||||| |||||||||||||||||||| | ||||||||| |||||||||| ||||||  ||||||||    
T  14829658 gacaccggacatgacacagacactgacacgccgacacagctaataatttg-aaaaatcacataattcatggtaattac 14829734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 18426932 - 18426993
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| ||||||||||||| || |||||||| ||||||||||| ||||| |||||||||    
T  18426932 acggacacggacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaatta 18426993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 376
Target Start/End: Original strand, 40052318 - 40052367
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattca 376  Q
    |||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 310 - 386
Target Start/End: Original strand, 3610602 - 3610678
Alignment:
Q  310 acaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||| |||||||||| |||||||||||||| |||||   |||||||| ||||||| ||| || |||||||||||||    
T  3610602 acaccggacacgacacagacactgacacgccaacacagttaataatttaaaaaaataacataactcagtgtaattac 3610678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 3865635 - 3865587
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcaca 369  Q
    |||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  3865635 gacacggacactgacacgccgacacagctaataatttgaaaaaaccaca 3865587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 316 - 384
Target Start/End: Original strand, 9800015 - 9800083
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    ||||||||||| ||||||||||||||||||  | |||||||||| ||||| ||| ||||| ||||||||    
T  9800015 gacacgacacgtacactgacacgccgacacctctaataatttgagaaaattacataattccgtgtaatt 9800083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 10318113 - 10318065
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcaca 369  Q
    |||||||||||||||||||||||||| | |||||||||||||| |||||    
T  10318113 gacacggacactgacacgccgacacagctaataatttgaaaaagtcaca 10318065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 23915903 - 23916003
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    ||||||| ||| |||||||| || |||||| |||||||||| || ||||||| ||| ||||| | || || |||||||||||||| |||| | |||||||    
T  23915903 ctataaaacaccgatacggacacggacaccggacacgacacagaaactgacatgccaacacagctaacaacttgaaaaaatcacacaattaaatgtaatt 23916002  T
Q  385 a 385  Q
    |    
T  23916003 a 23916003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 383
Target Start/End: Original strand, 14618740 - 14618823
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaat 383  Q
    |||| ||| ||||||||||||||||||| |||||| |||| |||||  | |||||||| | |||| |||| |||||||||||||    
T  14618740 acgggtacggacaccagacacgacacgggcactgagacgctgacacccctaataatttaagaaaaccacataattcagtgtaat 14618823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 34185196 - 34185137
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| ||||||||||||||  | |||||||| ||||||||||| ||||||||||||||||    
T  34185196 gacagtgacacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattac 34185137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 386
Target Start/End: Original strand, 11610480 - 11610566
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| ||| |||| ||||||| |||| || ||||||||||| ||||  | |||||||| ||||||||||| ||||||||||| ||||    
T  11610480 acgggtacggacatcagacacaacacagatactgacacgccaacaccgctaataatttaaaaaaatcacataattcagtgtagttac 11610566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 14840375 - 14840306
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||| || |||||||| |||| |  |||||||| | ||||||||| |||||||||||||||    
T  14840375 gacacgacacggataccgacacgccaacaccattaataatttcagaaaatcacataattcagtgtaatta 14840306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 385
Target Start/End: Original strand, 16788971 - 16789056
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||||| | |||||||| ||||| || |||| | |   |||||||| ||||||||| | |||||||||||||||    
T  16788971 acggatacagacaccagatatgacacggatactgatacaccgatatagttaataatttaaaaaaatcatataattcagtgtaatta 16789056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 25775493 - 25775554
Alignment:
Q  326 ggacactgacacgccgacacaacaaataatttgaaaa-aatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||| |||||   ||||||||||||| ||||||| ||||||||||||||||    
T  25775493 ggacactgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattac 25775554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 12703999 - 12704051
Alignment:
Q  333 gacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    ||||||||||||| || |||||||||| |||| |||| |||||||||||||||    
T  12703999 gacacgccgacaccactaataatttgagaaaagcacataattcagtgtaatta 12704051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 14027959 - 14028011
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacac 337  Q
    |||| ||||||||||||||| || |||||| |||||||||||||||| |||||    
T  14027959 ctatgaagcacggatacggacacggacaccggacacgacacggacaccgacac 14028011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 29508424 - 29508488
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||| ||||| |||||| |||| || || |||||||||||||||||| | |||||||||||||||    
T  29508424 gacatggacattgacacaccgataccactaataatttgaaaaaatcatataattcagtgtaatta 29508488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 34307895 - 34307795
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||| ||||||||| ||  ||||| |||| ||||| |||||  |||||| |||||  | |||||||||| ||||||||| | ||||||||||||    
T  34307895 ctatgaagcatggatacggacacgaacaccggacatgacacagacacgaacacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaatt 34307796  T
Q  385 a 385  Q
    |    
T  34307795 a 34307795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 385
Target Start/End: Original strand, 7928459 - 7928494
Alignment:
Q  350 aataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||||||| |||||||||||||||    
T  7928459 aataatttgaaaaaatcacataattcagtgtaatta 7928494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 386
Target Start/End: Original strand, 14832081 - 14832144
Alignment:
Q  323 cacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| || |||||||||| ||| | |||||||||||||||||||| || ||| |||||||||    
T  14832081 cacggatacggacacgccgatacagctaataatttgaaaaaatcacataactcaatgtaattac 14832144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 384
Target Start/End: Original strand, 21720744 - 21720807
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||||||||||||||||||||||||    |||||||||| || ||| || ||||||||||||||    
T  21720744 gacacggacactgacacgccgacaccgataataatttgagaatatctcataattcagtgtaatt 21720807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 25652121 - 25652050
Alignment:
Q  310 acaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    ||||||||||||||||||||||| ||||||| ||||    |||||||||| ||||| | | |||||||||||    
T  25652121 acaccagacacgacacggacactaacacgccaacacggataataatttgagaaaatgatataattcagtgta 25652050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 21257058 - 21257000
Alignment:
Q  328 acactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| ||||||  |||||| | |||||||||||||||||||| |||||||| |||||||    
T  21257058 acaccgacacgatgacacagctaataatttgaaaaaatcacataattcagtataattac 21257000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 1509539 - 1509584
Alignment:
Q  341 gacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| | |||||||||||||||||||| |||| |||||||||||    
T  1509539 gacacagctaataatttgaaaaaatcacataatttagtgtaattac 1509584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 5441115 - 5441046
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||| ||||||||||||||| |||  | || ||||||| ||||||||| |||||| || |||||    
T  5441115 gacacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcacataattcaatggaatta 5441046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 23870635 - 23870574
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| |||||| ||||||  | |||||||||||||||||| | |||||||||| ||||    
T  23870635 acggacacggacacgtcgacaccgctaataatttgaaaaaatcatataattcagtgtgatta 23870574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 29112356 - 29112295
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||  ||||| || ||| |||||| ||||||| | |||||||||||||||    
T  29112356 acggacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 29112295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 49651853 - 49651800
Alignment:
Q  333 gacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||| ||||||||  | |||||||||||||||||||| |||||| |||||||||    
T  49651853 gacatgccgacacggctaataatttgaaaaaatcacataattcactgtaattac 49651800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 51206412 - 51206371
Alignment:
Q  341 gacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||| | |||||||||||||||||||| ||||||||||||    
T  51206412 gacacagctaataatttgaaaaaatcacataattcagtgtaa 51206371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 382
Target Start/End: Original strand, 4469799 - 4469891
Alignment:
Q  290 aagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    |||||||||||| || ||| |||||  ||| ||||| |||| ||||||||| | ||  | |||||||| | ||||||||| ||||||||||||    
T  4469799 aagcacggatacagacacaaacacctaacaagacacagacattgacacgccaataccgccaataatttaagaaaatcacataattcagtgtaa 4469891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 381
Target Start/End: Original strand, 38731162 - 38731258
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    |||| |||||||||| |||| || |||| | ||||||||| | |||| |||| | ||| ||  | |||||||| ||||||||||| |||||||||||    
T  38731162 ctatgaagcacggatgcggacacggacaacggacacgacatgtacaccgacatgtcgataccgctaataattttaaaaaatcacataattcagtgta 38731258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 386
Target Start/End: Original strand, 13359 - 13445
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| |||||| || | |||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||    
T  13359 acggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattac 13445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 386
Target Start/End: Complemental strand, 21968 - 21882
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||| |||||| || | |||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||    
T  21968 acggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattac 21882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 51791 - 51856
Alignment:
Q  321 gacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattac 51856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 285 - 386
Target Start/End: Original strand, 130426 - 130527
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatt 384  Q
    |||| ||||| ||||||||| || |||||| ||||||||||||||| ||||| |||||||||   |||| ||||||||||||||| ||||||||||||||    
T  130426 ctatgaagcatggatacggacacggacaccggacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaatt 130525  T
Q  385 ac 386  Q
    ||    
T  130526 ac 130527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 241562 - 241638
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||| ||||||||||||||||||||||||||||||| | ||||||||| |||||||||| |||| ||||||||||    
T  241562 gacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaatta 241638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 385
Target Start/End: Original strand, 9839 - 9942
Alignment:
Q  282 aacctataaagcacggatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    ||||||| ||||||||||||||| || |||||| ||||||||| |||||| |||||||||||||| | |||  ||| | ||||||| ||||| |||||||    
T  9839 aacctatgaagcacggatacggacacggacaccggacacgacatggacaccgacacgccgacacagctaatttttttagaaaatcataaaatgcagtgta 9938  T
Q  382 atta 385  Q
    ||||    
T  9939 atta 9942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 19551 - 19620
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||| |||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||    
T  19551 gacacgacactgacactgacacgccgatacaactaataatttg-aaaaatcacataattcagtgtaattac 19620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 14522 - 14575
Alignment:
Q  333 gacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattac 14575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 385
Target Start/End: Complemental strand, 225359 - 225283
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||| |||||||||||||||||||||||||||||||   |||||||||| ||||| ||| ||| || ||||||||    
T  225359 gacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaatta 225283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 71709 - 71771
Alignment:
Q  327 gacactgacacgccgacacaacaaataatttg--aaaaaatcacaaaattcagtgtaattact 387  Q
    |||||||||||||||||||| | |||||||||  ||||||||||| |||||||||||||||||    
T  71709 gacactgacacgccgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattact 71771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 3969 - 3863
Alignment:
Q  285 ctataaagcacggatacggatacagacaccagacacgacacg-----gacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtg 379  Q
    |||| ||||||||||| ||| || ||||||||||||||||||     |||||||| | ||||||||    |||||||| ||||||||||| |||||||||    
T  3969 ctatgaagcacggatatggacacggacaccagacacgacacgacacagacactgatatgccgacacggttaataatttaaaaaaatcacataattcagtg 3870  T
Q  380 taattac 386  Q
    |||||||    
T  3869 taattac 3863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 92790 - 92852
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||||||||||||||  | |||||||||| ||||| ||| ||||||||||||||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattac 92852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 23395 - 23464
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||| ||||||||||||||||||||   ||||| |  ||||||||||| |||||||||||||||    
T  23395 gacacgacacagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaatta 23464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 33430 - 33377
Alignment:
Q  333 gacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||||||||||| | |||||||||||||||| ||| ||||||||||||||||    
T  33430 gacacgccgacacagctaataatttgaaaaaataacataattcagtgtaattac 33377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 17824 - 17763
Alignment:
Q  325 cggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    |||||| | |||||| |||||||| |||||||||||||||||||| |||| |||||||||||    
T  17824 cggacaataacacgctgacacaactaataatttgaaaaaatcacataatttagtgtaattac 17763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 333 - 385
Target Start/End: Complemental strand, 7378 - 7326
Alignment:
Q  333 gacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||| ||||||||| |||||||||| |||| ||||||||||    
T  7378 gacacgccgacacaactaataatttggaaaaatcacataatttagtgtaatta 7326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 15008 - 15052
Alignment:
Q  294 acggatacggatacagacaccagacacgacacggacactgacacg 338  Q
    ||||| ||||| || ||||||||||||||||||||||||||||||    
T  15008 acggacacggacacggacaccagacacgacacggacactgacacg 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 8002 - 8054
Alignment:
Q  333 gacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||||||| |||||||||||||||||| | ||| |||||||||||    
T  8002 gacacgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta 8054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 8634 - 8710
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||| ||||||||| ||||||||||||| ||||||  | ||||||||   ||||||||| | |||||| ||||||    
T  8634 gacaccggacacgacatggacactgacacgtcgacacttctaataatttaggaaaatcacatagttcagtataatta 8710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 8707 - 8649
Alignment:
Q  328 acactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||| ||||||||||| ||||||||||||| |||||| ||||| || |||||||    
T  8707 acactgacatgccgacacaactaataatttgaaaatatcacataattcggtataattac 8649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 90818 - 90887
Alignment:
Q  316 gacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||| ||||||||||| || |||| |  |||||||||| ||||||| | |||||||||||||||    
T  90818 gacacgacacagacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaatta 90887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 21011 - 21071
Alignment:
Q  309 gacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcaca 369  Q
    |||||||||||||||||||||||||||| || |||||    |||||||||| |||||||||    
T  21011 gacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcaca 21071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 263475 - 263387
Alignment:
Q  297 gatacggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||| || |||||  || |||||||||||||||||| | | ||||  | |||||||||| |||| |||| |||||||||||||||    
T  263475 gatacggacacggacactggatacgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaatta 263387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 1013 - 1076
Alignment:
Q  319 acgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaa 382  Q
    ||||||| ||| ||||||| |||||||  | |||||||||||||||| ||| ||||||||||||    
T  1013 acgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaa 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 386
Target Start/End: Complemental strand, 4983 - 4897
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaa-tcacaaaattcagtgtaattac 386  Q
    ||||||||||||||  ||||||||||  || || |||| |||||||| | |||||||| |||||| ||||| ||||||||||||||||    
T  4983 acggatacagacacg-gacacgacacatactctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattac 4897  T

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Target: scaffold0722 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 7108 - 7046
Alignment:
Q  324 acggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaattac 386  Q
    ||||||||||| ||| ||||||| | |||||||||||||||| ||| |||| ||| |||||||    
T  7108 acggacactgatacgtcgacacagctaataatttgaaaaaattacataatttagtataattac 7046  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 53170 - 53224
Alignment:
Q  331 ctgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgtaatta 385  Q
    |||||||||||| ||  | |||||||||| ||||||||| |||||||||||||||    
T  53170 ctgacacgccgataccgccaataatttgagaaaatcacataattcagtgtaatta 53224  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 381
Target Start/End: Original strand, 137739 - 137820
Alignment:
Q  300 acggatacagacaccagacacgacacggacactgacacgccgacacaacaaataatttgaaaaaatcacaaaattcagtgta 381  Q
    |||||||| ||||||| |||||||| ||| |||| ||| ||||  |  |||||||||| | ||||||||| |||||||||||    
T  137739 acggatacggacaccaaacacgacatggagactgtcacaccgagtctgcaaataatttaagaaaatcacacaattcagtgta 137820  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 10553 - 10509
Alignment:
Q  318 cacgacacggacactgacacgccgacacaacaaataatttgaaaa 362  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||    
T  10553 cacgacacggacactaacacaccgacacagctaataatttgaaaa 10509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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