View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18320_low_36 (Length: 247)
Name: NF18320_low_36
Description: NF18320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18320_low_36 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 7948162 - 7948353
Alignment:
| Q |
16 |
tgtgtagctagctatgaatgaaatgtgataggcactgcctaatcaaaagtttcttatgcatacaccagtaagtgttaactacgattaatttttgagaaac |
115 |
Q |
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| T |
7948162 |
tgtgtagctagctatgaatgaaatgtgataggcactgcctaatcaaaagtttcttatgcatacaccagtaagtgttaactacgattaattttttagaaac |
7948261 |
T |
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| Q |
116 |
tttaactggaaattcctctttaaattaaacaattattacttttctatactttaaaatgcaaattttaaatttctatggcgctcaatggttac |
207 |
Q |
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| T |
7948262 |
tttaactggaaattcctctttaaattaaacaattattacttttctatactttaaaatgcaaattttaaatttctatggcgctcaatggttac |
7948353 |
T |
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