View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18321_high_15 (Length: 309)
Name: NF18321_high_15
Description: NF18321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18321_high_15 |
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Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 31616946 - 31617238
Alignment:
| Q |
1 |
caactacattggtgtgaagagaaaaatagcaaagtgagagtcatagatgggaaactacaaagagattccactccacnnnnnnnnccatcacattgaccca |
100 |
Q |
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| T |
31616946 |
caactacattggtgtgaagagaaaaatagcaaagtgagagtcatagatgggaaactacaaagagattccactccacttttttttccatcacattgaccca |
31617045 |
T |
|
| Q |
101 |
caaaaaaggtttatgtaaattaatattgcttcatgagtggatgatgaatatgcatgaattcatttcatgcatataaaggaatattcataacatgcttttt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
31617046 |
caaaaaaggtttatgtaaattaatattgcttcatgagtggatgatgaatatgcatgaatgcatttcatgcatataaaggaatattcataacatgcttttt |
31617145 |
T |
|
| Q |
201 |
gtaaatatggaattaaagaaaatggagaaggaccctacaaatcaaagtgaaacatatgtggagt-gcatatggaatattttggggtatgaaat |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
31617146 |
gtaaatatggaattaaagaaaatggagaaggaccctacaaatcaaagtgaaacatatgtggagtagcatatggaatattttggggtatgaaat |
31617238 |
T |
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