View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18321_high_29 (Length: 217)
Name: NF18321_high_29
Description: NF18321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18321_high_29 |
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Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 12791425 - 12791612
Alignment:
| Q |
17 |
agttatcaggtaagattgaggattttcaagaatacctcatgtatgcctcagttttttgtacagccaaatttcaatagatatgcaatggtgggaggatttt |
116 |
Q |
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| T |
12791425 |
agttatcaggtaagattgaggattttcaagaatacctcatgtatgcctcagttttttatacagccaaatttcaatagatatgcaatggtgggaggatttt |
12791524 |
T |
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| Q |
117 |
cacgcatatcacaacctcaaagaacttgtcgnnnnnnngacaacatgtttgcatgtaaaaagccaaattaatagaaaagtagtataat |
204 |
Q |
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| T |
12791525 |
cacgcatatcacaacctcaaagaacttgtcgcaaaaaagagaacatgtttgcgtgtaaaaagccaaattaatagaaaagtagtataat |
12791612 |
T |
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