View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18321_low_20 (Length: 295)
Name: NF18321_low_20
Description: NF18321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18321_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 44 - 287
Target Start/End: Complemental strand, 4224967 - 4224724
Alignment:
| Q |
44 |
tcgatcggattgtattttctgataggttttatgcaatcgaaagttacagtctgataattataaatcaaaagagacttgagcaaagtcgaagggtccataa |
143 |
Q |
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| T |
4224967 |
tcgatcggattgtattttctgataggttttatgcaatcgaaagttacagtctgataattataaatcaaaagagacttgagcaaagtcgaagggtccataa |
4224868 |
T |
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| Q |
144 |
aatctttaaaaaccaacttgacatgtgttctagtggtgcagtggcataatcaatcgaccaacataatttgacacccctcttggtacatatttaaatcgac |
243 |
Q |
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|||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
4224867 |
aatcttcaaaaaccaacttgacatgtgttccaatggtgcagtggcataatcaatcgaccaacataatttgacattcctcttggtacatatttaaatcgac |
4224768 |
T |
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| Q |
244 |
tgtgttagacaaattgagcgttatgttacatttaggtctgtgct |
287 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4224767 |
tgtgttagacaaattgagcgttatgttacatttaggtctgtgct |
4224724 |
T |
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