View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18322_high_20 (Length: 295)
Name: NF18322_high_20
Description: NF18322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18322_high_20 |
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Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 17 - 291
Target Start/End: Complemental strand, 36354241 - 36353967
Alignment:
| Q |
17 |
tataatcaatagataagttgaaaaatataagttgaatataatcaatagatcttgttgtgaatattttatattatcgcctttttgaaccaatgactaacca |
116 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
36354241 |
tataatcaatagataagttgaaaaatataacttgaatataatcaatagatcttgttgtgaatattttgtattatcgcctttttgaaccaatgactaacca |
36354142 |
T |
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| Q |
117 |
attaatgttgacaaagacaaaggaaaatataagttgaaatttttattgaaaaatgaatacaaagaaaacatttaccctcttctgcatgtactcaagttct |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36354141 |
attaatgttgacaaagacaaaggaaaatataagttgaaatttttattgaaaagtgaatacaaagaaaacatttaccctcttctgcatgtactcaagttct |
36354042 |
T |
|
| Q |
217 |
gcaaacagcatttcattctgatgtagcacaaacaaagttagaaggaagacattagtatttatcagcagaatattg |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36354041 |
gcaaacagcatttcattctgatgtagcacaaacaaagttagaaggaagacattagtatttatcagcagaatattg |
36353967 |
T |
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