View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18322_high_22 (Length: 281)
Name: NF18322_high_22
Description: NF18322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18322_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 4440738 - 4441005
Alignment:
| Q |
1 |
tgtgcaatcagctagtgattagatgaggatgttgtctctatctatgacgcattcttcctaattggtgtgtctttgacttttttgtatatgctaactgtag |
100 |
Q |
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| T |
4440738 |
tgtgcaatcagctagtgattagatgaggatgttgtctctatctatgacgcattcttcctaattggtgtgtctttgacttttttgtatatgctaactgtag |
4440837 |
T |
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| Q |
101 |
agcttaaggtctcatgtgttttagatagctcgacaaaatgttcaaatttcaattggtgtgcgcttagaaaattttgcaaacatatgtgatgtatttccca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
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| T |
4440838 |
agcttaaggtctcatgtgttttagatagctcgacaaaatgttcaaatttcaattggtgtgcgcttagaaaattttgtaaacatatgtgatgtattttcca |
4440937 |
T |
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| Q |
201 |
atctagttaagcaaatgctgacacggtgc--atgacatagggctacctgaaaatcaatcatagaatct |
266 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
4440938 |
atctagttaagcaaatgctgacacggtgcatatgacatagggctacctgaaaatcaatcatagaatct |
4441005 |
T |
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