View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18322_low_2 (Length: 534)

Name: NF18322_low_2
Description: NF18322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18322_low_2
NF18322_low_2
[»] chr3 (43 HSPs)
chr3 (1-524)||(10954996-10955519)
chr3 (88-340)||(10944810-10945058)
chr3 (223-464)||(13398450-13398689)
chr3 (1-80)||(55401119-55401195)
chr3 (5-79)||(41961579-41961650)
chr3 (5-61)||(4987235-4987291)
chr3 (1-79)||(20503509-20503584)
chr3 (5-61)||(40993290-40993346)
chr3 (1-61)||(28918045-28918107)
chr3 (1-61)||(7171545-7171605)
chr3 (11-81)||(27505305-27505372)
chr3 (11-78)||(14216957-14217021)
chr3 (11-78)||(14223086-14223150)
chr3 (12-79)||(34185052-34185116)
chr3 (5-79)||(35222986-35223057)
chr3 (5-52)||(14832158-14832205)
chr3 (5-80)||(13845464-13845536)
chr3 (1-61)||(25775553-25775611)
chr3 (18-61)||(15999965-16000008)
chr3 (6-61)||(18426998-18427053)
chr3 (5-81)||(25074842-25074916)
chr3 (11-61)||(3631738-3631788)
chr3 (5-78)||(8789489-8789561)
chr3 (5-62)||(8039778-8039835)
chr3 (5-61)||(14223803-14223859)
chr3 (5-61)||(21211341-21211398)
chr3 (5-54)||(34307737-34307786)
chr3 (5-61)||(11252024-11252080)
chr3 (5-79)||(14209172-14209243)
chr3 (5-61)||(25064966-25065022)
chr3 (25-61)||(40052380-40052416)
chr3 (6-79)||(8842378-8842448)
chr3 (1-59)||(26492162-26492220)
chr3 (15-79)||(49651716-49651777)
chr3 (5-54)||(15796245-15796294)
chr3 (11-77)||(24204983-24205047)
chr3 (10-77)||(29508503-29508567)
chr3 (5-79)||(52369834-52369906)
chr3 (5-54)||(55213021-55213070)
chr3 (9-79)||(4466540-4466607)
chr3 (11-59)||(10690209-10690257)
chr3 (5-61)||(28812574-28812630)
chr3 (5-37)||(45451601-45451633)
[»] chr4 (51 HSPs)
chr4 (1-79)||(23292926-23293001)
chr4 (1-61)||(28964203-28964263)
chr4 (1-59)||(34306761-34306819)
chr4 (3-61)||(49431072-49431130)
chr4 (3-81)||(12895212-12895287)
chr4 (1-61)||(16073438-16073498)
chr4 (5-61)||(19482727-19482783)
chr4 (5-78)||(30982808-30982878)
chr4 (11-78)||(3947702-3947766)
chr4 (16-61)||(29205527-29205572)
chr4 (1-61)||(4157480-4157540)
chr4 (1-61)||(21945547-21945607)
chr4 (22-76)||(28084589-28084640)
chr4 (18-79)||(715545-715603)
chr4 (18-79)||(752871-752929)
chr4 (6-79)||(8423658-8423728)
chr4 (11-78)||(14465006-14465070)
chr4 (5-79)||(53381530-53381602)
chr4 (1-61)||(4157193-4157253)
chr4 (5-79)||(5414101-5414172)
chr4 (5-61)||(16184879-16184935)
chr4 (18-79)||(3064868-3064926)
chr4 (6-79)||(24613630-24613700)
chr4 (3-79)||(2361915-2361988)
chr4 (1-59)||(12797295-12797353)
chr4 (25-77)||(22440559-22440608)
chr4 (3-79)||(35157925-35157998)
chr4 (11-79)||(36635384-36635449)
chr4 (5-79)||(24343560-24343632)
chr4 (1-46)||(29205488-29205533)
chr4 (5-61)||(15724498-15724554)
chr4 (5-57)||(22234838-22234890)
chr4 (5-61)||(30838269-30838325)
chr4 (13-79)||(35161092-35161155)
chr4 (12-59)||(27706123-27706170)
chr4 (8-54)||(903984-904030)
chr4 (7-57)||(40179595-40179645)
chr4 (3-33)||(54580006-54580036)
chr4 (28-61)||(5922546-5922579)
chr4 (42-75)||(6879421-6879454)
chr4 (5-62)||(34589657-34589714)
chr4 (5-62)||(40224452-40224509)
chr4 (6-59)||(40481690-40481743)
chr4 (4-78)||(12323967-12324038)
chr4 (1-37)||(13307921-13307957)
chr4 (5-53)||(19312394-19312442)
chr4 (5-79)||(19500787-19500858)
chr4 (5-61)||(21873317-21873373)
chr4 (5-61)||(21929178-21929234)
chr4 (1-37)||(38846991-38847027)
chr4 (1-61)||(42640573-42640628)
[»] chr1 (49 HSPs)
chr1 (3-79)||(37598877-37598950)
chr1 (1-80)||(18337373-18337449)
chr1 (5-81)||(32461391-32461464)
chr1 (1-79)||(22515827-22515902)
chr1 (5-79)||(40917808-40917879)
chr1 (1-79)||(46348323-46348398)
chr1 (11-61)||(1486659-1486709)
chr1 (1-77)||(42359391-42359464)
chr1 (1-62)||(51410069-51410130)
chr1 (1-61)||(1815301-1815361)
chr1 (5-79)||(9828103-9828174)
chr1 (1-61)||(40258888-40258948)
chr1 (5-79)||(47989556-47989627)
chr1 (1-62)||(38078615-38078676)
chr1 (8-61)||(40181922-40181975)
chr1 (13-79)||(6427531-6427594)
chr1 (1-61)||(18190063-18190123)
chr1 (9-79)||(18556385-18556452)
chr1 (5-79)||(25934675-25934746)
chr1 (7-61)||(5898221-5898275)
chr1 (10-77)||(16297223-16297287)
chr1 (5-61)||(19562570-19562626)
chr1 (3-46)||(21530735-21530778)
chr1 (5-62)||(19637816-19637873)
chr1 (11-60)||(31015091-31015140)
chr1 (5-79)||(34741894-34741965)
chr1 (368-467)||(828854-828951)
chr1 (5-61)||(5944342-5944398)
chr1 (16-56)||(6427594-6427634)
chr1 (5-61)||(6612115-6612171)
chr1 (5-53)||(29163344-29163392)
chr1 (5-79)||(31694639-31694710)
chr1 (26-79)||(2218297-2218347)
chr1 (5-55)||(9690234-9690285)
chr1 (5-78)||(10577676-10577746)
chr1 (5-56)||(43492454-43492505)
chr1 (27-79)||(15765828-15765877)
chr1 (5-46)||(9629859-9629900)
chr1 (5-53)||(17831485-17831534)
chr1 (5-54)||(39130729-39130778)
chr1 (5-80)||(41597409-41597481)
chr1 (5-57)||(12918993-12919045)
chr1 (5-61)||(16164259-16164315)
chr1 (21-57)||(17778617-17778653)
chr1 (5-61)||(21032265-21032321)
chr1 (6-80)||(27965939-27966010)
chr1 (5-79)||(30173691-30173762)
chr1 (10-62)||(33202956-33203008)
chr1 (26-80)||(48040413-48040464)
[»] chr5 (40 HSPs)
chr5 (1-80)||(21576684-21576760)
chr5 (1-77)||(21190998-21191071)
chr5 (5-76)||(39268541-39268609)
chr5 (11-61)||(31084382-31084432)
chr5 (3-79)||(43564927-43565000)
chr5 (5-61)||(15382533-15382589)
chr5 (5-79)||(39698600-39698671)
chr5 (5-59)||(21542089-21542143)
chr5 (5-59)||(30502345-30502399)
chr5 (5-59)||(30542688-30542742)
chr5 (5-54)||(21522809-21522858)
chr5 (5-54)||(21533375-21533424)
chr5 (5-60)||(7677764-7677819)
chr5 (6-79)||(17123097-17123166)
chr5 (14-61)||(23015939-23015986)
chr5 (12-79)||(14873577-14873641)
chr5 (5-61)||(30098993-30099049)
chr5 (17-57)||(30183620-30183660)
chr5 (1-61)||(42893404-42893464)
chr5 (11-77)||(43001859-43001922)
chr5 (5-78)||(6401557-6401627)
chr5 (10-61)||(27932288-27932339)
chr5 (10-61)||(36642707-36642757)
chr5 (5-59)||(21814320-21814374)
chr5 (11-79)||(30098391-30098456)
chr5 (24-61)||(17088358-17088395)
chr5 (8-61)||(26312820-26312873)
chr5 (5-57)||(43554574-43554626)
chr5 (5-79)||(16304366-16304437)
chr5 (5-61)||(19579760-19579816)
chr5 (12-84)||(19820323-19820389)
chr5 (10-80)||(21194062-21194129)
chr5 (5-61)||(32630690-32630746)
chr5 (5-79)||(32766872-32766943)
chr5 (5-78)||(3966562-3966632)
chr5 (16-77)||(24238603-24238661)
chr5 (5-76)||(18592132-18592200)
chr5 (24-79)||(35017110-35017162)
chr5 (1-61)||(4105303-4105363)
chr5 (5-61)||(28588629-28588685)
[»] chr2 (33 HSPs)
chr2 (6-79)||(26769571-26769641)
chr2 (1-77)||(2438661-2438734)
chr2 (3-78)||(28596515-28596587)
chr2 (1-61)||(12224267-12224327)
chr2 (1-79)||(18840953-18841028)
chr2 (5-79)||(37419802-37419873)
chr2 (1-79)||(38117099-38117174)
chr2 (5-80)||(30717458-30717530)
chr2 (5-80)||(35056927-35056999)
chr2 (1-79)||(15972917-15972992)
chr2 (5-79)||(24009343-24009414)
chr2 (1-79)||(37559021-37559096)
chr2 (11-80)||(42511321-42511387)
chr2 (1-61)||(5040778-5040838)
chr2 (5-61)||(37411199-37411255)
chr2 (6-61)||(19942314-19942369)
chr2 (6-61)||(27084318-27084373)
chr2 (5-61)||(34993937-34993993)
chr2 (10-79)||(11223793-11223858)
chr2 (11-61)||(41843500-41843550)
chr2 (5-54)||(5367240-5367289)
chr2 (12-61)||(15657930-15657979)
chr2 (5-61)||(20242682-20242738)
chr2 (1-53)||(30404813-30404865)
chr2 (5-61)||(34784926-34784982)
chr2 (5-49)||(36096331-36096375)
chr2 (5-78)||(44860379-44860449)
chr2 (22-60)||(28412422-28412460)
chr2 (12-61)||(14996174-14996222)
chr2 (5-37)||(4207915-4207947)
chr2 (5-79)||(21782744-21782815)
chr2 (5-49)||(32749781-32749825)
chr2 (1-37)||(43585984-43586020)
[»] chr6 (41 HSPs)
chr6 (5-61)||(8365463-8365519)
chr6 (5-79)||(10339054-10339125)
chr6 (1-61)||(28152142-28152202)
chr6 (1-79)||(34595178-34595253)
chr6 (1-78)||(17841530-17841604)
chr6 (1-79)||(4877987-4878061)
chr6 (5-81)||(16766756-16766829)
chr6 (11-79)||(17327590-17327655)
chr6 (1-76)||(32978842-32978914)
chr6 (1-57)||(28715339-28715395)
chr6 (11-78)||(31384984-31385048)
chr6 (5-61)||(3209447-3209503)
chr6 (5-61)||(5970052-5970108)
chr6 (5-79)||(7248417-7248488)
chr6 (5-61)||(8714039-8714095)
chr6 (17-79)||(8776908-8776967)
chr6 (5-61)||(9107314-9107370)
chr6 (5-79)||(18367895-18367966)
chr6 (1-61)||(24645525-24645585)
chr6 (6-53)||(17435259-17435306)
chr6 (11-61)||(9629448-9629498)
chr6 (5-59)||(16488536-16488590)
chr6 (1-54)||(853821-853874)
chr6 (5-54)||(9522950-9522999)
chr6 (1-61)||(6898236-6898296)
chr6 (5-79)||(7378027-7378098)
chr6 (1-61)||(16833352-16833412)
chr6 (18-53)||(21044837-21044872)
chr6 (21-78)||(31959214-31959268)
chr6 (11-61)||(12696383-12696433)
chr6 (1-51)||(23771622-23771672)
chr6 (6-76)||(8389411-8389478)
chr6 (6-78)||(9658928-9658998)
chr6 (28-79)||(13360313-13360361)
chr6 (20-53)||(21068095-21068128)
chr6 (11-56)||(29020966-29021011)
chr6 (5-54)||(33001251-33001300)
chr6 (1-57)||(1315976-1316032)
chr6 (26-76)||(9025448-9025495)
chr6 (5-61)||(10294166-10294222)
chr6 (5-57)||(12627536-12627588)
[»] scaffold0652 (1 HSPs)
scaffold0652 (1-78)||(403-477)
[»] chr7 (35 HSPs)
chr7 (3-80)||(598254-598328)
chr7 (11-79)||(5409771-5409836)
chr7 (1-79)||(21880196-21880271)
chr7 (5-61)||(24339701-24339757)
chr7 (3-79)||(15680855-15680928)
chr7 (1-80)||(21864852-21864928)
chr7 (5-78)||(32287404-32287474)
chr7 (11-80)||(43027403-43027469)
chr7 (11-79)||(9778559-9778624)
chr7 (5-61)||(20549839-20549895)
chr7 (11-61)||(32093969-32094020)
chr7 (11-87)||(1433513-1433586)
chr7 (5-79)||(7133212-7133284)
chr7 (1-54)||(8234190-8234243)
chr7 (1-61)||(24105722-24105782)
chr7 (18-80)||(29763128-29763187)
chr7 (1-61)||(33994256-33994316)
chr7 (11-61)||(2334314-2334364)
chr7 (11-61)||(13770750-13770800)
chr7 (5-80)||(18212972-18213044)
chr7 (5-58)||(26733352-26733405)
chr7 (13-79)||(17852056-17852119)
chr7 (5-61)||(26033405-26033461)
chr7 (5-61)||(32308179-32308235)
chr7 (6-79)||(7438766-7438836)
chr7 (27-79)||(6490786-6490835)
chr7 (24-80)||(14729770-14729823)
chr7 (7-61)||(27093368-27093422)
chr7 (7-61)||(27184879-27184933)
chr7 (20-61)||(3294259-3294300)
chr7 (5-62)||(6028684-6028741)
chr7 (1-42)||(7197271-7197312)
chr7 (36-82)||(3991392-3991435)
chr7 (1-49)||(25956489-25956536)
chr7 (26-80)||(40131938-40131989)
[»] scaffold0512 (1 HSPs)
scaffold0512 (1-80)||(4975-5051)
[»] chr8 (44 HSPs)
chr8 (5-80)||(22652035-22652107)
chr8 (4-79)||(29510233-29510305)
chr8 (1-61)||(5813636-5813696)
chr8 (1-80)||(36450693-36450769)
chr8 (5-79)||(34450961-34451032)
chr8 (1-61)||(40332235-40332295)
chr8 (5-77)||(3025599-3025668)
chr8 (5-80)||(15816057-15816129)
chr8 (16-61)||(22943304-22943349)
chr8 (3-77)||(926730-926801)
chr8 (1-79)||(18407763-18407838)
chr8 (11-61)||(8343381-8343431)
chr8 (6-78)||(29447040-29447109)
chr8 (5-80)||(3951475-3951547)
chr8 (5-80)||(21465471-21465543)
chr8 (5-61)||(126302-126358)
chr8 (1-61)||(15023212-15023272)
chr8 (5-79)||(29447503-29447574)
chr8 (5-78)||(43737752-43737822)
chr8 (5-60)||(44462151-44462206)
chr8 (5-60)||(44469684-44469739)
chr8 (3-61)||(20679350-20679408)
chr8 (11-79)||(26902104-26902169)
chr8 (1-54)||(31557040-31557093)
chr8 (5-79)||(11803318-11803389)
chr8 (6-80)||(14134748-14134819)
chr8 (5-49)||(26915202-26915246)
chr8 (11-80)||(39820482-39820548)
chr8 (12-81)||(6065584-6065650)
chr8 (3-80)||(24413498-24413572)
chr8 (11-61)||(16641924-16641974)
chr8 (11-61)||(22197686-22197736)
chr8 (11-61)||(24858070-24858120)
chr8 (27-79)||(30067968-30068017)
chr8 (5-81)||(33405322-33405395)
chr8 (8-53)||(12570461-12570506)
chr8 (8-53)||(12570687-12570732)
chr8 (5-61)||(17751703-17751760)
chr8 (5-61)||(17760690-17760747)
chr8 (1-34)||(20873113-20873146)
chr8 (5-80)||(28745557-28745629)
chr8 (5-45)||(2572016-2572056)
chr8 (5-61)||(24205763-24205819)
chr8 (33-61)||(31109473-31109501)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-61)||(8842-8902)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-79)||(241653-241724)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-79)||(3352-3427)
[»] scaffold0450 (1 HSPs)
scaffold0450 (5-79)||(8564-8635)
[»] scaffold0019 (1 HSPs)
scaffold0019 (5-61)||(71784-71840)
[»] scaffold0050 (1 HSPs)
scaffold0050 (3-61)||(70324-70382)
[»] scaffold0380 (1 HSPs)
scaffold0380 (5-79)||(8649-8720)
[»] scaffold0793 (1 HSPs)
scaffold0793 (18-79)||(4821-4879)
[»] scaffold0306 (1 HSPs)
scaffold0306 (5-77)||(13454-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (5-77)||(21804-21873)
[»] scaffold0004 (1 HSPs)
scaffold0004 (10-78)||(92875-92940)
[»] scaffold0086 (1 HSPs)
scaffold0086 (5-80)||(2987-3059)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-54)||(45492-45545)
[»] scaffold0136 (1 HSPs)
scaffold0136 (5-61)||(3793-3849)
[»] scaffold0697 (1 HSPs)
scaffold0697 (3-46)||(1690-1733)
[»] scaffold0361 (1 HSPs)
scaffold0361 (10-53)||(14580-14623)
[»] scaffold0057 (1 HSPs)
scaffold0057 (5-79)||(24083-24155)
[»] scaffold0154 (1 HSPs)
scaffold0154 (5-81)||(13472-13545)
[»] scaffold0279 (1 HSPs)
scaffold0279 (8-45)||(17840-17877)
[»] scaffold0223 (1 HSPs)
scaffold0223 (38-79)||(20238-20279)
[»] scaffold0044 (1 HSPs)
scaffold0044 (5-46)||(53239-53280)
[»] scaffold0008 (1 HSPs)
scaffold0008 (5-61)||(263316-263372)
[»] scaffold0123 (1 HSPs)
scaffold0123 (5-44)||(44486-44525)
[»] scaffold0171 (1 HSPs)
scaffold0171 (8-54)||(23573-23619)
[»] scaffold0623 (1 HSPs)
scaffold0623 (8-61)||(5940-5993)
[»] scaffold0246 (1 HSPs)
scaffold0246 (6-59)||(19629-19682)
[»] scaffold0085 (1 HSPs)
scaffold0085 (27-80)||(26046-26099)


Alignment Details
Target: chr3 (Bit Score: 516; Significance: 0; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 516; E-Value: 0
Query Start/End: Original strand, 1 - 524
Target Start/End: Original strand, 10954996 - 10955519
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagcacgtaacgtaatatcattta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10954996 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagcacgtaacgtaatatcattta 10955095  T
Q  101 cttgtccagaaatagattattggctggcgacataaaacaaaaaatggacctgaagaaatggaagtgggattcttaatttcctttgccatggctcatatta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10955096 cttgtccagaaatagattattggctggcgacataaaacaaaaaatggacctgaagaaatggaagtgggattcttaatttcctttgccatggctcatatta 10955195  T
Q  201 acattcataattaatttttatggacagggatgtcagcgatcttggacacatgacgacttctcagattggcatacattgatgttaatagtgggcatccgtt 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10955196 acattcataattaatttttatggacagggatgtcagcgatcttggacacatgacgacttctcagattggcatacattgatgttaatagcgggcatccgtt 10955295  T
Q  301 aatgttcaatagcttaagagaggagggaaattcatctcttggcaataaaccaagtcttggacaatcatcaaatttcaatgattccaaagaggaaggcaac 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10955296 aatgttcaatagcttaagagaggagggaaattcatctcttggcaataaaccaagtcttggacaatcatcaaatttcaatgattccaaagaggaaggcaac 10955395  T
Q  401 atgtctggcaaggacataagttctgtggacaagttacaaatacaagtgatttcggaaaagaaggcaacatggcttgaaaagactcgagccctgagcacat 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10955396 atgtctggcaaggacataagttctgtggacaagttacaaatacaagtgatttcggaaaagaaggcaacatggcttgaaaagactcgagccctgagcacat 10955495  T
Q  501 ttccttctaagtatttcatctcag 524  Q
    ||||||||||||||||||| ||||    
T  10955496 ttccttctaagtatttcatttcag 10955519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 88 - 340
Target Start/End: Original strand, 10944810 - 10945058
Alignment:
Q  88 gtaatatcatttacttgtccagaaatagattattggctggcgacataaaacaaaaaatggacctgaagaaatggaagtgggattcttaatttcctttgcc 187  Q
    |||||| |||| |||| |||||| |||||||||||||||||||||||||| |||||||| ||||   |||||||||||| ||||||| ||||||||||||    
T  10944810 gtaatagcattaacttatccagatatagattattggctggcgacataaaagaaaaaatgtacct---gaaatggaagtgtgattcttcatttcctttgcc 10944906  T
Q  188 atggctcatattaaca-ttcataattaatttttatggacagggatgtcagcgatcttggacacatgacgacttctcagattggcatacattgatgttaat 286  Q
    ||||||||||||| || ||||||||| |||||||| |||||| |||| |||||||||||||||||||||||||||| ||||||||||  ||| |||||||    
T  10944907 atggctcatattatcacttcataatttatttttat-gacaggcatgtgagcgatcttggacacatgacgacttctccgattggcatatcttgctgttaat 10945005  T
Q  287 agtgggcatccgttaatgttcaatagcttaagagaggagggaaattcatctctt 340  Q
    ||  ||| ||| |||||||||||||||||||||||| |||||||||||||||||    
T  10945006 ag-cggcttccattaatgttcaatagcttaagagagaagggaaattcatctctt 10945058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 223 - 464
Target Start/End: Complemental strand, 13398689 - 13398450
Alignment:
Q  223 gacagggatgtcagcgatcttggacacatgacgacttctcagattggcatacattgatgttaatagtgggcatccgttaatgttcaatagcttaagagag 322  Q
    ||||||||||| || ||||||||||| ||||  | |||||  | |||||||| ||||| |||| || || ||   | ||||| ||| || ||||||||||    
T  13398689 gacagggatgtgagagatcttggacaaatgatcatttctcttagtggcataccttgattttaacagcggacagtggctaatgctcagtaacttaagagag 13398590  T
Q  323 gagggaaattcatctcttggcaataaaccaagtcttggacaatcatcaaatttcaatgattccaaagaggaaggcaacatgtctggcaaggacataagtt 422  Q
    || |||||  ||   ||||||| ||| ||||||||||||||||||||||||| || || ||||||||||||||| ||||| || ||||| |||||||||     
T  13398589 gaaggaaacccagaccttggcagtaacccaagtcttggacaatcatcaaattccagtgtttccaaagaggaaggaaacatatccggcaacgacataagt- 13398491  T
Q  423 ctgtggacaagttacaaatacaagtgatttcggaaaagaagg 464  Q
     | ||||||| ||| ||| |||||||||||| ||||||||||    
T  13398490 -tttggacaatttataaagacaagtgatttcagaaaagaagg 13398450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 55401119 - 55401195
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||   |||||||||||||||||||    
T  55401119 acaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgagg---agtgtccgtgcttcatagc 55401195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 41961650 - 41961579
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||    
T  41961650 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatcc---gagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 4987291 - 4987235
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  4987291 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagt 4987235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 20503509 - 20503584
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||   ||||||||||||||||||    
T  20503509 acaagtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgagg---agtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 40993346 - 40993290
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  40993346 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagt 40993290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28918045 - 28918107
Alignment:
Q  1 acaagtgtcggtgtcg--gacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||    
T  28918045 acaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatccaaggagt 28918107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7171545 - 7171605
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||||||||| ||||||    
T  7171545 acaagtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagt 7171605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 27505305 - 27505372
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagca 81  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||||   ||||||||||||||||||||    
T  27505305 gtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgagg---agtgtccgtgcttcatagca 27505372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 14216957 - 14217021
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    |||||||||||||||||||| |||||||||||||| ||||||||   ||| |||||||||||||||||    
T  14216957 gtgtcggacacgacacgtgtacgacactgggacacacctaatcc---gagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 14223086 - 14223150
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    |||||||||||||||||||| |||||||||||||| ||||||||   ||| |||||||||||||||||    
T  14223086 gtgtcggacacgacacgtgtacgacactgggacacacctaatcc---gagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 34185116 - 34185052
Alignment:
Q  12 tgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||   ||||||||||||||||||    
T  34185116 tgtcggacaagacatgtgtccgacaccgggacacgcctaatccgagg---agtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 35222986 - 35223057
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||||| |||||||||| ||||| ||||||||| | ||||||||   ||||||||||||||||||    
T  35222986 gtgtcggtgtcggacatgacacgtgtctgacacggggacacgctttatccgagg---agtgtccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 14832158 - 14832205
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaat 52  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||    
T  14832158 gtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 13845536 - 13845464
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||||||||||||||||| ||||||| ||||| | ||||||||| |||| |||   |||||||||||||||||||    
T  13845536 gtgtcggtgtcggacacgagacgtgtctgacacggagacacgccttatccaagg---agtgtccgtgcttcatagc 13845464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25775553 - 25775611
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||| |  |||||||||||  ||||||||||||||||||||||    
T  25775553 acaagtgtcggtgtcggacacgtc--gtgtccgacaccaggacacgcctaatccgaggagt 25775611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 16000008 - 15999965
Alignment:
Q  18 acacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagt 15999965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 18426998 - 18427053
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||| |||||||||||||| ||| ||||||| ||||||| |||||||    
T  18426998 tgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagt 18427053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 25074842 - 25074916
Alignment:
Q  5 gtgtcggtgtcggacacga-cacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagca 81  Q
    ||||||||||| ||||| | | |||||||||||||||||||| ||||||||||||   ||||| ||||||||||||||    
T  25074842 gtgtcggtgtctgacaccaacgcgtgtccgacactgggacacacctaatccgagg---agtgttcgtgcttcatagca 25074916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 3631738 - 3631788
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||| ||||||||||  ||||||||||| ||||||||||    
T  3631738 gtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagt 3631788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 8789561 - 8789489
Alignment:
Q  5 gtgtcggtgtcggacacgacacg--tgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||   |||| ||||| | ||||||||||||||||||   |||||||||||||||||    
T  8789561 gtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgagg---agtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 8039835 - 8039778
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagta 62  Q
    |||||||||||||||| || || |||||||||| ||||||||| |||||||| |||||    
T  8039835 gtgtcggtgtcggacatgagacatgtccgacaccgggacacgcttaatccgaagagta 8039778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 14223859 - 14223803
Alignment:
Q  5 gtgtcggtgtcggacac-gacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||||||| |||||||    
T  14223859 gtgtcggtgtccgacaccgacacgtgtccgaca-tgggacacgcctaatctgaggagt 14223803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 21211341 - 21211398
Alignment:
Q  5 gtgtcggtgtcggacac-gacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||  ||||| ||| |||||||||||||||||||| |||||||||||||||    
T  21211341 gtgtcggtgttcgacaccgacgcgtgtccgacactgggacactcctaatccgaggagt 21211398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 34307786 - 34307737
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    |||||||||||||||||||||||| | ||| |||| ||||||||||||||    
T  34307786 gtgtcggtgtcggacacgacacgtcttcgatactgagacacgcctaatcc 34307737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 11252024 - 11252080
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||| ||||| ||||||||||| ||  || ||||||||||||||||||||    
T  11252024 gtgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagt 11252080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 14209172 - 14209243
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||||||||||||||| |||||  |||| || ||||||||    || ||||||||||||||||||    
T  14209172 gtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatcc---aagaagtgtccgtgcttcatag 14209243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 25064966 - 25065022
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||| |||||||||||||||||||||| ||||| ||||||||  | |||||||||||    
T  25064966 gtgttggtgtcggacacgacacgtgtctgacaccgggacacggtttatccgaggagt 25065022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 40052380 - 40052416
Alignment:
Q  25 acgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||| |||||||||||||||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagt 40052416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 8842378 - 8842448
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||| |||||||||| |||  || | || ||||||||||||||||||   ||||||||||||||||||    
T  8842378 tgtcggtgtcagacacgacacatgttagatattgagacacgcctaatccgagg---agtgtccgtgcttcatag 8842448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26492220 - 26492162
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgagga 59  Q
    |||||| ||||||||||||||||||| |||| |||||   |||||| ||||||||||||    
T  26492220 acaagtatcggtgtcggacacgacacatgtctgacaccaagacacgtctaatccgagga 26492162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 49651777 - 49651716
Alignment:
Q  15 cggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||| | |||||||| ||||||| ||||||||   ||| ||||||||||||||||||    
T  49651777 cggacacgacacatatccgacaccgggacacacctaatcc---gagaagtgtccgtgcttcatag 49651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 15796294 - 15796245
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    |||| |||||||||||| |||||||||| |||| || |||||||||||||    
T  15796294 gtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatcc 15796245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 24205047 - 24204983
Alignment:
Q  11 gtgtcggacac-gacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 77  Q
    ||||||||||| ||| ||||||||||||  ||||||||||||| |||||   ||||||||||||||||    
T  24205047 gtgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgagg---agtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 29508503 - 29508567
Alignment:
Q  10 ggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 77  Q
    |||||||||||||||||  ||||||||| |||||||| |||||||    || ||||||||||||||||    
T  29508503 ggtgtcggacacgacacacgtccgacaccgggacacgtctaatcc---aagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 52369834 - 52369906
Alignment:
Q  5 gtgtcggtgtcggacac-gacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||| |||||||| ||| ||||||| |||| ||||||| |||| ||||||||||   |||||||||||||||    
T  52369834 gtgtcggtatcggacaccgacgcgtgtccaacaccgggacacacctattccgaggagt---gtccgtgcttcatag 52369906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 55213021 - 55213070
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    ||||||||||||| ||| ||||||||||||||| | ||||||| ||||||    
T  55213021 gtgtcggtgtcgggcacaacacgtgtccgacaccgagacacgcataatcc 55213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 4466607 - 4466540
Alignment:
Q  9 cggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||| || | | |||||||||||||||||||| || || |||||   ||||||||||||||||||    
T  4466607 cggtgtcggatacaagatgtgtccgacactgggacacggcttattcgagg---agtgtccgtgcttcatag 4466540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 10690257 - 10690209
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgagga 59  Q
    ||||||||||| ||||||||| ||||| | ||||| |||||||||||||    
T  10690257 gtgtcggacacaacacgtgtctgacacggcgacacacctaatccgagga 10690209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 28812574 - 28812630
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||| |||||| ||||||| || |||||||||   ||||||||||||||||||||||    
T  28812574 gtgttggtgtcagacacgatacatgtccgacagcaggacacgcctaatccgaggagt 28812630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 45451601 - 45451633
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacac 37  Q
    |||||||||||||||||||||| ||||||||||    
T  45451601 gtgtcggtgtcggacacgacacatgtccgacac 45451633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 6e-26; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23293001 - 23292926
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||    
T  23293001 acaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagg---agtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28964263 - 28964203
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  28964263 acaagtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagt 28964203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34306819 - 34306761
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgagga 59  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||    
T  34306819 acaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgagga 34306761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 49431072 - 49431130
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  49431072 aagtgtcggtgtcggacacgacacgtgtccaacaccgggacacgccttatccgaggagt 49431130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 12895287 - 12895212
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagca 81  Q
    ||||||||||||||||||||||| || |||||||  ||||||||||||||||||||   ||||| ||||||||||||||    
T  12895287 aagtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgagg---agtgttcgtgcttcatagca 12895212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16073438 - 16073498
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||||||||| || |||||||||||  |||||||||||||||||||||    
T  16073438 acaagtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagt 16073498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 19482727 - 19482783
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||    
T  19482727 gtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagt 19482783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 30982878 - 30982808
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||| | |   |||||||||||||||||    
T  30982878 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaag---agtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 3947766 - 3947702
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||||   |||||||||||||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgagg---agtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 29205527 - 29205572
Alignment:
Q  16 ggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  29205527 ggacacgacacatgtccgacactgggacacgcctaatccgaggagt 29205572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4157480 - 4157540
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||||||| |||||||||| | || ||||||||| ||||||||    
T  4157480 acaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagt 4157540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21945547 - 21945607
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||| ||||| |||||||||| |  ||||||||||||||||||||    
T  21945547 acaagtgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccgaggagt 21945607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 28084589 - 28084640
Alignment:
Q  22 gacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttca 76  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgagg---agtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 715603 - 715545
Alignment:
Q  18 acacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||| |||||||||| ||||||||||||||||||||   ||||||||||||||||||    
T  715603 acacgacacatgtccgacacagggacacgcctaatccgagg---agtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 752929 - 752871
Alignment:
Q  18 acacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||| |||||||||| ||||||||||||||||||||   ||||||||||||||||||    
T  752929 acacgacacatgtccgacacagggacacgcctaatccgagg---agtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 8423728 - 8423658
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||||   |||| ||||||||||| ||||||    
T  8423728 tgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatc---ggagaagtgtccgtgcgtcatag 8423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 14465070 - 14465006
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    ||||| |||||||||||||| ||||||||||||||| |||||| ||||   |||||||||||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgagg---agtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 53381602 - 53381530
Alignment:
Q  5 gtgtcggtgtcggacac-gacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||| ||| ||| |||||||| ||||||| ||||||||||||   ||||||||||||||||||    
T  53381602 gtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgagg---agtgtccgtgcttcatag 53381530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4157193 - 4157253
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||||||| |||||||||| | || || |||||| ||||||||    
T  4157193 acaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagt 4157253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 5414172 - 5414101
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||| ||||||||||||||||||||| ||||| ||||||| ||| |||| |||   ||||||||||||||||||    
T  5414172 gtgtcagtgtcggacacgacacgtgtctgacacagggacacaccttatccaagg---agtgtccgtgcttcatag 5414101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 16184879 - 16184935
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||| | ||||  | ||||||||||||||||||||||||||||||||||    
T  16184879 gtgtcggtgtcgcatacgatgcctgtccgacactgggacacgcctaatccgaggagt 16184935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 3064926 - 3064868
Alignment:
Q  18 acacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||| |||||||| ||| ||||||||||||||||||   ||||||||||||||||||    
T  3064926 acacgacacatgtccgactctgagacacgcctaatccgagg---agtgtccgtgcttcatag 3064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 24613700 - 24613630
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||| ||||||||||||||| |||||  ||||||| ||||||| |||   ||||||||||||||||||    
T  24613700 tgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctagg---agtgtccgtgcttcatag 24613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 2361988 - 2361915
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||||||||||| |||||| ||||| | ||||| ||||||| || |   ||||||||||||||||||    
T  2361988 aagtgtcggtgtcggacacgactcgtgtctgacaccgagacacacctaatctgacg---agtgtccgtgcttcatag 2361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 12797353 - 12797295
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgagga 59  Q
    ||||||||||||||||||||||| || |||| ||||| |||||| | ||||||||||||    
T  12797353 acaagtgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatccgagga 12797295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 22440608 - 22440559
Alignment:
Q  25 acgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 77  Q
    |||||||||||||| |||||||||||||||||||   ||||||||||||||||    
T  22440608 acgtgtccgacactaggacacgcctaatccgagg---agtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 35157998 - 35157925
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||| |||||||||| ||||| |||| || |||||| ||||||   ||| ||||||||||||||||||    
T  35157998 aagtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatcc---gagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 36635384 - 36635449
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||| ||||||||||| ||| ||||| |||||||||||||||||| |   ||||||||||||||||||    
T  36635384 gtgtcagacacgacacgcgtcagacaccgggacacgcctaatccgaag---agtgtccgtgcttcatag 36635449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 24343560 - 24343632
Alignment:
Q  5 gtgtcggtgtcggacac-gacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||| ||||| ||| |||||||||||| |||||||||||| || ||||   ||||||||||||||||||    
T  24343560 gtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgagg---agtgtccgtgcttcatag 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29205488 - 29205533
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacg 46  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||||    
T  29205488 acaagtgtcggtgttggacacgacacatgtccgacaccgggacacg 29205533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 15724554 - 15724498
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||| ||||||||| |||||    ||||||||||||||||||||    
T  15724554 gtgtcggtgtcggacacaacacgtgtcagacaccaaaacacgcctaatccgaggagt 15724498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 22234890 - 22234838
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgag 57  Q
    ||||||||||| |||||||||||||||||||||  ||||||  ||||||||||    
T  22234890 gtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgag 22234838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 30838269 - 30838325
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||| ||||||||| |||||||||||||||||   ||||||||||| |||||||||    
T  30838269 gtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagt 30838325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 35161092 - 35161155
Alignment:
Q  13 gtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||||||| || |||| ||||||||   ||  ||||||||||||||||||    
T  35161092 gtcggacacgacacgtgtccgacaccggaacacacctaatcc---gaaaagtgtccgtgcttcatag 35161155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 27706170 - 27706123
Alignment:
Q  12 tgtcggacacgacacgtgtccgacactgggacacgcctaatccgagga 59  Q
    ||||||||||||||||| ||||| || ||||||||||||||| |||||    
T  27706170 tgtcggacacgacacgtatccgataccgggacacgcctaatctgagga 27706123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 903984 - 904030
Alignment:
Q  8 tcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    ||||||| |||||||||| |||||||||||||||||||  |||||||    
T  903984 tcggtgttggacacgacatgtgtccgacactgggacacatctaatcc 904030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 40179645 - 40179595
Alignment:
Q  7 gtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgag 57  Q
    |||||||||||||||||||| ||| ||||||   |||||||||||||||||    
T  40179645 gtcggtgtcggacacgacacatgttcgacaccatgacacgcctaatccgag 40179595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 54580036 - 54580006
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccg 33  Q
    |||||||||||||||||||||||||||||||    
T  54580036 aagtgtcggtgtcggacacgacacgtgtccg 54580006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 5922579 - 5922546
Alignment:
Q  28 tgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||||||| |||||||    
T  5922579 tgtccgacactgggacacgcctaatctgaggagt 5922546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 6879454 - 6879421
Alignment:
Q  42 acacgcctaatccgaggagtagtgtccgtgcttc 75  Q
    |||||||||||| |||||||||||||||||||||    
T  6879454 acacgcctaatctgaggagtagtgtccgtgcttc 6879421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 34589714 - 34589657
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagta 62  Q
    ||||| ||||||||||||| |||| || ||||| | | ||||||||||||||||||||    
T  34589714 gtgtcagtgtcggacacgatacgtatctgacaccgaggcacgcctaatccgaggagta 34589657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 40224509 - 40224452
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagta 62  Q
    |||||||||| ||||| || | || ||||||| ||||||||| |||||||||||||||    
T  40224509 gtgtcggtgttggacatgatatgtttccgacattgggacacgtctaatccgaggagta 40224452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 40481690 - 40481743
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgagga 59  Q
    ||||||||| |||||||||||||||||||||| |  |||| | |||||||||||    
T  40481690 tgtcggtgttggacacgacacgtgtccgacaccgaaacacacttaatccgagga 40481743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 12323967 - 12324038
Alignment:
Q  4 agtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    ||||||||||||||||| |||||||||  | ||| || |||| ||| ||||||||   |||||||||||||||||    
T  12323967 agtgtcggtgtcggacatgacacgtgtgtggcacgggaacacaccttatccgagg---agtgtccgtgcttcata 12324038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13307921 - 13307957
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacac 37  Q
    |||||||| |||||||||||||||||||||| |||||    
T  13307921 acaagtgttggtgtcggacacgacacgtgtcagacac 13307957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 19312394 - 19312442
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatc 53  Q
    |||||| ||||||| |||||||||||||||||| | |||||| ||||||    
T  19312394 gtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatc 19312442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 19500858 - 19500787
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||||||||||||  || || || | | |||||||||||| |||||||   ||||||||||||||    
T  19500858 gtgtcggtgtcggacacgacacgcctctgataccgaggcacgcctaatccaaggagta---tccgtgcttcatag 19500787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 21873373 - 21873317
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||| ||| ||||||  |||||||||||||||| |||||||| ||||||| ||||||    
T  21873373 gtgttggtctcggacgtgacacgtgtccgacaccgggacacgtctaatccaaggagt 21873317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 21929234 - 21929178
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||| ||| ||||||  |||||||||||||||| |||||||| ||||||| ||||||    
T  21929234 gtgttggtctcggacgtgacacgtgtccgacaccgggacacgtctaatccaaggagt 21929178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 38847027 - 38846991
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacac 37  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  38847027 acaagtgtcagtgtcggatacgacacgtgtccgacac 38846991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42640573 - 42640628
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||||||     |||||||| |||  ||||||||||||||||||||||    
T  42640573 acaagtgtcggtgtcggaca-----cgtgtccggcaccaggacacgcctaatccgaggagt 42640628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 9e-25; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 37598877 - 37598950
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||||||||||||||||    
T  37598877 aagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgagg---agtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 18337373 - 18337449
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||   |||||||||||||||||||    
T  18337373 acaagtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgagg---agtgtccgtgcttcatagc 18337449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 32461464 - 32461391
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagca 81  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    || ||||||||||||||||||||    
T  32461464 gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatcc---aagaagtgtccgtgcttcatagca 32461391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 22515902 - 22515827
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||||||||||||||| | |||||||| | ||||||||||||||||||   ||||||||||||||||||    
T  22515902 acaagtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgagg---agtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 40917808 - 40917879
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||   | ||||||||||||||||    
T  40917808 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgagg---actgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 46348398 - 46348323
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||    |||||||||||||||||    
T  46348398 acaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgagg---tgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 1486709 - 1486659
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1486709 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagt 1486659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 42359464 - 42359391
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 77  Q
    |||||||||||||||||||| |||  ||||||||||| ||||||||||||||||||||   ||||||||||||||||    
T  42359464 acaagtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgagg---agtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 51410069 - 51410130
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagta 62  Q
    |||||||||||||||||||||||||||| |||||||| | |||||||||||||| |||||||    
T  51410069 acaagtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagta 51410130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1815301 - 1815361
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||||||| |||||||    
T  1815301 acaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagt 1815361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 9828103 - 9828174
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||| ||||| ||||||||||||||||||||| |||||||| |||||||||||   ||||||||||||||||||    
T  9828103 gtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgagg---agtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 40258948 - 40258888
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||| |||||||||| ||||||||||  ||||||||||||||||||||||    
T  40258948 acaagtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagt 40258888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 47989556 - 47989627
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||||||||||| |||| ||||  ||||||||||||||||||||   ||||||||||||||||||    
T  47989556 gtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgagg---agtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38078676 - 38078615
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagta 62  Q
    |||||||||||||||||||||||||| ||| | ||||  |||||||||||||||||||||||    
T  38078676 acaagtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagta 38078615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 40181922 - 40181975
Alignment:
Q  8 tcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  40181922 tcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagt 40181975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 6427531 - 6427594
Alignment:
Q  13 gtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||||||| ||||||||||||||| || |   ||||||||||||||||||    
T  6427531 gtcggacacgacacgtgtccgacaccgggacacgcctaatctgatg---agtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18190123 - 18190063
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||| |||| ||||| ||||||||||||||| ||||||| |||||||||||||||    
T  18190123 acaagtgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccgaggagt 18190063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 18556452 - 18556385
Alignment:
Q  9 cggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||| ||| |||||||| |||||||||||||||||||||||||   ||| ||||||||||||||||||    
T  18556452 cggtgtcagacccgacacgtatccgacactgggacacgcctaatcc---gagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 25934675 - 25934746
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||||||||| ||||| |||| |||||| |||| |||   ||||||||||||||||||    
T  25934675 gtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaagg---agtgtccgtgcttcatag 25934746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 5898275 - 5898221
Alignment:
Q  7 gtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||| |||||||||||||||| |||| |||||||| ||||||||||||||    
T  5898275 gtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagt 5898221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 16297287 - 16297223
Alignment:
Q  10 ggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 77  Q
    |||||||||||||||  |||||||||||  |||||||||||||||||||   ||||||||||||||||    
T  16297287 ggtgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgagg---agtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 19562626 - 19562570
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||| |||||||| || ||||||||||||||| ||||||| |||||||||||||||    
T  19562626 gtgtcagtgtcggatacaacacgtgtccgacacagggacacacctaatccgaggagt 19562570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 21530735 - 21530778
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacg 46  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  21530735 aagtgtcggtgtcggacacgacacatgtccgacactaggacacg 21530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 19637816 - 19637873
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagta 62  Q
    ||||||||||||||||||| || | |||||||| ||||| | ||||||||||||||||    
T  19637816 gtgtcggtgtcggacacgatacatatccgacaccgggacgcccctaatccgaggagta 19637873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 31015091 - 31015140
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggag 60  Q
    ||||||||||||||||||||| ||||  |||||||||||||||| |||||    
T  31015091 gtgtcggacacgacacgtgtctgacatcgggacacgcctaatccaaggag 31015140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 34741894 - 34741965
Alignment:
Q  5 gtgtcggtgtcggacacgaca-cgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||| |||||| ||||||||| |||||||||||| |||||||||||||||||| |   ||||||||||||||||||    
T  34741894 gtgttggtgtctgacacgacaacgtgtccgacac-gggacacgcctaatccgaag---agtgtccgtgcttcatag 34741965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 467
Target Start/End: Complemental strand, 828951 - 828854
Alignment:
Q  368 tcaaatttcaatgattccaaagaggaaggcaacatgtctggcaaggacataagttctgtggacaagttacaaatacaagtgatttcggaaaagaaggcaa 467  Q
    |||||||||| || ||||||||||||||||| | ||  |||||| ||| | |||||||  |||||  | ||| ||||||||||||| |||||||||||||    
T  828951 tcaaatttcagtgtttccaaagaggaaggcagcctgaatggcaatgacttgagttctg--gacaatcttcaactacaagtgatttcagaaaagaaggcaa 828854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 5944342 - 5944398
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||| || ||||||| |||| |||||||||| |||| ||||||||||||||||||    
T  5944342 gtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagt 5944398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 6427594 - 6427634
Alignment:
Q  16 ggacacgacacgtgtccgacactgggacacgcctaatccga 56  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  6427594 ggacacgacacgtgtccgataccgggacacgcctaatccga 6427634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 6612171 - 6612115
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||| |||||||||||| | |||||||||||  ||||||||||||||| ||||||    
T  6612171 gtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagt 6612115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 29163392 - 29163344
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatc 53  Q
    ||||||||||||||||||||||||| | ||||| |||||||| ||||||    
T  29163392 gtgtcggtgtcggacacgacacgtgcctgacaccgggacacggctaatc 29163344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 31694710 - 31694639
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||| |||| | | |||||| || |||||||||||| ||||   ||||||||||||||||||    
T  31694710 gtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgagg---agtgtccgtgcttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 2218297 - 2218347
Alignment:
Q  26 cgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||| |||||||||||||| ||||   ||||||||||||||||||    
T  2218297 cgtgtccgacactaggacacgcctaatctgagg---agtgtccgtgcttcatag 2218347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 9690285 - 9690234
Alignment:
Q  5 gtgtcggtgtcggacac-gacacgtgtccgacactgggacacgcctaatccg 55  Q
    ||||||| ||||| ||| |||||||||||||||| |||||||||||||||||    
T  9690285 gtgtcggcgtcggccactgacacgtgtccgacaccgggacacgcctaatccg 9690234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 10577746 - 10577676
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||||| |||| |||   |||||||||||||||||    
T  10577746 gtgtcgggggcggacacgacgcgtgtctgacacggggacacgccttatccaagg---agtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 43492505 - 43492454
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccga 56  Q
    ||||||||||| ||||| |||| |||||||||| || |||||||||||||||    
T  43492505 gtgtcggtgtcagacacaacacatgtccgacaccggcacacgcctaatccga 43492454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 15765828 - 15765877
Alignment:
Q  27 gtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||| |||||||||||||||||||||||| |   ||||||||||||||||||    
T  15765828 gtgtctgacactgggacacgcctaatccgaag---agtgtccgtgcttcatag 15765877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 9629900 - 9629859
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacg 46  Q
    |||||| ||||||||||||||| |||||||||| ||||||||    
T  9629900 gtgtcgatgtcggacacgacacatgtccgacaccgggacacg 9629859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 17831534 - 17831485
Alignment:
Q  5 gtgtcggtgtcggacac-gacacgtgtccgacactgggacacgcctaatc 53  Q
    ||||| ||||||||||| |||| ||||||||||| |||||||||||||||    
T  17831534 gtgtcagtgtcggacaccgacatgtgtccgacaccgggacacgcctaatc 17831485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 39130778 - 39130729
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    ||||||||||||||||| |||||||  ||||| |||||||||| ||||||    
T  39130778 gtgtcggtgtcggacacaacacgtgctcgacattgggacacgcttaatcc 39130729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 41597481 - 41597409
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||| ||||||||||||||||||||| ||||| |||| |||| | |||| |||   |||||| ||||||||||||    
T  41597481 gtgtccgtgtcggacacgacacgtgtctgacacggggatacgctttatccaagg---agtgtctgtgcttcatagc 41597409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 12918993 - 12919045
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgag 57  Q
    |||| ||| |||||||||||||||||| ||||| |||||||| || |||||||    
T  12918993 gtgttggtatcggacacgacacgtgtctgacacggggacacggcttatccgag 12919045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 16164315 - 16164259
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||| ||||| |||| | |||||||||||||||  ||||||||||||||||| ||||    
T  16164315 gtgttggtgttggacgcaacacgtgtccgacaccaggacacgcctaatccgaagagt 16164259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 17778617 - 17778653
Alignment:
Q  21 cgacacgtgtccgacactgggacacgcctaatccgag 57  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  17778617 cgacacgtgtccgacaccgggacatgcctaatccgag 17778653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 21032265 - 21032321
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||| |||||||||||||||| ||||||||||  | || ||||||||||| ||||||    
T  21032265 gtgtgggtgtcggacacgacatgtgtccgacatcgagagacgcctaatccaaggagt 21032321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 27966010 - 27965939
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||| ||||| |||||| | |||| | ||||| ||||||||||||||||||||   ||||||| |||||||||||    
T  27966010 tgtccgtgtcagacacgcctcgtgcctgacaccgggacacgcctaatccgagg---agtgtccatgcttcatagc 27965939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 30173762 - 30173691
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||| || ||||||||||||| |||||||| || |||||||||||| |||| || ||   ||||||||||||||    
T  30173762 gtgtccgtatcggacacgacacatgtccgactctaggacacgcctaacccgacgaata---tccgtgcttcatag 30173691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 33202956 - 33203008
Alignment:
Q  10 ggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagta 62  Q
    |||||| ||||||| || | |||||||| | ||||||||||||||||||||||    
T  33202956 ggtgtcagacacgatacatatccgacaccgtgacacgcctaatccgaggagta 33203008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 48040464 - 48040413
Alignment:
Q  26 cgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||||||||||||||||||||||||||    |||| |||||||||||||| ||||    
T  48040464 cgtgtccgacactgggacacgcctaat---tggaggagtgtccgtgcttcgtagc 48040413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 4e-24; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21576760 - 21576684
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||    
T  21576760 acaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgagg---agtgtccgtgcttcatagc 21576684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21191071 - 21190998
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 77  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||   ||||||||||||||||    
T  21191071 acaagtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgagg---agtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 39268609 - 39268541
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttca 76  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||    
T  39268609 gtgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgagg---agtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 31084382 - 31084432
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31084382 gtgtcggacacgacacgtgtccgacactgggacatgcctaatccgaggagt 31084432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 43564927 - 43565000
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||||||||   ||| ||||||||||||||||||    
T  43564927 aagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatcc---gagaagtgtccgtgcttcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 15382533 - 15382589
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||    
T  15382533 gtgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagt 15382589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 39698600 - 39698671
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||| || |||||||| | ||||||||||||||||||   ||||||||||||||||||    
T  39698600 gtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgagg---agtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 21542089 - 21542143
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgagga 59  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  21542089 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaagga 21542143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 30502399 - 30502345
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgagga 59  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  30502399 gtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaagga 30502345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 30542742 - 30542688
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgagga 59  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  30542742 gtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaagga 30542688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 21522809 - 21522858
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  21522809 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatcc 21522858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 21533375 - 21533424
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  21533375 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatcc 21533424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 7677764 - 7677819
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggag 60  Q
    ||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||    
T  7677764 gtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggag 7677819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 17123097 - 17123166
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||| |||||||| || |||||||||| ||||||||||||||||||||   ||||||||||||||||||    
T  17123097 tgtcggtgttggacacgaaacatgtccgacac-gggacacgcctaatccgagg---agtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 23015986 - 23015939
Alignment:
Q  14 tcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  23015986 tcggacacgacatgtgtccgacattgggacacgcctaatccgaggagt 23015939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 14873577 - 14873641
Alignment:
Q  12 tgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||| | |||||||||| |||| ||||||||||||||||||||   ||||||||||||||||||    
T  14873577 tgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgagg---agtgtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 30099049 - 30098993
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||| |||||||||||| ||||| ||||||||||| |||| ||||||    
T  30099049 gtgtcggtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagt 30098993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 30183620 - 30183660
Alignment:
Q  17 gacacgacacgtgtccgacactgggacacgcctaatccgag 57  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  30183620 gacacgacacgtgtccgacactgggacacgcctaattcgag 30183660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42893404 - 42893464
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||| ||||| |||||||||||||||  |||||||||||||  |||||||    
T  42893404 acaagtgtcggtgtcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagt 42893464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 43001859 - 43001922
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 77  Q
    |||||||||||||||||||||  ||||  |||||||||||||||||||   ||||||||||||||||    
T  43001859 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgagg---agtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 6401557 - 6401627
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    ||||| ||||||||||||||||||||| ||||| |||| |||||| |||| |||   |||||||||||||||||    
T  6401557 gtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttatccaagg---agtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 27932288 - 27932339
Alignment:
Q  10 ggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||| |||||  ||||||||||||| ||||||||    
T  27932288 ggtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagt 27932339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 36642757 - 36642707
Alignment:
Q  10 ggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  36642757 ggtgtcggacacgacacgtgtccgacac-gggacacgcctaattggaggagt 36642707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 21814320 - 21814374
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgagga 59  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||| |||| ||||    
T  21814320 gtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaagga 21814374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 30098391 - 30098456
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||| |||||  |||||| ||||||||||||   | ||||||||||||||||    
T  30098391 gtgtcggacacgacacgtgtcagacaccaggacacacctaatccgagg---aatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 17088358 - 17088395
Alignment:
Q  24 cacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||| |||||||||||||||||||||||    
T  17088358 cacgtgtccgacaccgggacacgcctaatccgaggagt 17088395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 26312820 - 26312873
Alignment:
Q  8 tcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||| ||||||| |||||  |||||| |||||||||||||||    
T  26312820 tcggtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagt 26312873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 43554574 - 43554626
Alignment:
Q  5 gtgtcggtgtcggacac-gacacgtgtccgacactgggacacgcctaatccgag 57  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  43554574 gtgtcggtgtcggacaccgacgcgtgtccgacac-gggacacgcctaatccgag 43554626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 16304437 - 16304366
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||| || |||||||||||||||| ||||||| | |||||| |||||||||||   | ||||||||||||||||    
T  16304437 gtgtcagtatcggacacgacacgtgcccgacaccgagacacgtctaatccgagg---aatgtccgtgcttcatag 16304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 19579760 - 19579816
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||| |||||||||||||||  ||||  |||| |||||||||||||||||||||||    
T  19579760 gtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaatccgaggagt 19579816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 19820389 - 19820323
Alignment:
Q  12 tgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagcacgt 84  Q
    |||||||||||||   |||||||||| ||||||||||||||| ||||   |||||||||||||||||| ||||    
T  19820389 tgtcggacacgac---tgtccgacaccgggacacgcctaatcagagg---agtgtccgtgcttcatagaacgt 19820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 21194129 - 21194062
Alignment:
Q  10 ggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||| ||||||||||| |||| ||||| ||| ||||||||||||||||   ||||||||||||| |||||    
T  21194129 ggtgttggacacgacacatgtcagacaccggggcacgcctaatccgagg---agtgtccgtgctttatagc 21194062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 32630746 - 32630690
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||| |||||||| ||||||||||||||||| || ||||| |||||| ||||||||    
T  32630746 gtgtcagtgtcggatacgacacgtgtccgacattgagacacacctaattcgaggagt 32630690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 32766943 - 32766872
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||| | ||||||||||||||||||  ||| ||| |||||| ||||   ||||||||||||||||||    
T  32766943 gtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgagg---agtgtccgtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 3966562 - 3966632
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    ||||| ||||||||||| ||| |||||| |||  |||||||| |||||||||||   |||||||||||||||||    
T  3966562 gtgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaatccgagg---agtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 24238661 - 24238603
Alignment:
Q  16 ggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 77  Q
    ||||||||||||||||| ||||||||||| || |||||| |||   ||||||||||||||||    
T  24238661 ggacacgacacgtgtccaacactgggacatgcataatcctagg---agtgtccgtgcttcat 24238603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 18592132 - 18592200
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttca 76  Q
    ||||||||||||||||| ||||||||| ||||  |||||||| ||||| ||| |   |||||||||||||||    
T  18592132 gtgtcggtgtcggacacaacacgtgtctgacatcgggacacggctaattcgatg---agtgtccgtgcttca 18592200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 35017110 - 35017162
Alignment:
Q  24 cacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||| |||  ||||||||||||||||||||   ||||||||||||||||||    
T  35017110 cacgtgtccaacatcgggacacgcctaatccgagg---agtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4105303 - 4105363
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||| ||| || ||| ||| | ||||| || ||||||||||||||||||||||||||    
T  4105303 acaagtgtaggtatcagactcgatatgtgtctgatactgggacacgcctaatccgaggagt 4105363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 28588685 - 28588629
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||| | || |||||  |||||||| |||||||| ||||    
T  28588685 gtgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagt 28588629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 6e-23; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 26769571 - 26769641
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  26769571 tgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagg---agtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2438734 - 2438661
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 77  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||   ||||||||||||||||    
T  2438734 acaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgagg---agtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 28596515 - 28596587
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||   |||||||||||||||||    
T  28596515 aagtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgagg---agtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12224267 - 12224327
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  12224267 acaagtgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagt 12224327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18841028 - 18840953
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||| ||||||||||||   ||||||||||||||||||    
T  18841028 acaagtgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgagg---agtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 37419802 - 37419873
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||||||||||   ||||||||||||||||||    
T  37419802 gtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgagg---agtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 38117174 - 38117099
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||    |||||||||||||||||    
T  38117174 acaagtgttggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgagg---ggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 30717530 - 30717458
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||||||| |||   |||||||||||||||||||    
T  30717530 gtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaagg---agtgtccgtgcttcatagc 30717458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 35056927 - 35056999
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||| ||||   |||||||||||||||||||    
T  35056927 gtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgagg---agtgtccgtgcttcatagc 35056999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 15972917 - 15972992
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||| |   | ||||||||||||||||    
T  15972917 acaagtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaag---aatgtccgtgcttcatag 15972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 24009343 - 24009414
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||   ||||||||||||||||||    
T  24009343 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaagg---agtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 37559021 - 37559096
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||||||||  |||||||||||||||| || |||||| ||||||||||   ||||||||||||||||||    
T  37559021 acaagtgtcggtgtcggacttgacacgtgtccgacaccggtacacgcttaatccgagg---agtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 42511387 - 42511321
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||||   |||||||||||||||||||    
T  42511387 gtgtcggacacaacacgtgtccgacacagggacacggctaatccgagg---agtgtccgtgcttcatagc 42511321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5040778 - 5040838
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||| ||| ||||||    
T  5040778 acaagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctagtccaaggagt 5040838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 37411255 - 37411199
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||||| ||||||||||    
T  37411255 gtgtcgatgtcgaacacgacgcgtgtccgacactgggacacgcctagtccgaggagt 37411199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 19942314 - 19942369
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||| || ||||| ||||| |||||||||||||||||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagt 19942369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 27084318 - 27084373
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||||| |||||||    
T  27084318 tgtcggtgtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagt 27084373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 34993993 - 34993937
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||||| | ||||||    
T  34993993 gtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagt 34993937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 11223858 - 11223793
Alignment:
Q  10 ggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||| ||||   ||||||||||||||||||    
T  11223858 ggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgagg---agtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 41843500 - 41843550
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||| ||||||||||||||||| ||||||||| | |||||||||||    
T  41843500 gtgtcggacgcgacacgtgtccgacacggggacacgctttatccgaggagt 41843550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 5367240 - 5367289
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    |||||||||||||||||||||| | |||||| | ||||||||||||||||    
T  5367240 gtgtcggtgtcggacacgacacatatccgactccgggacacgcctaatcc 5367289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 15657930 - 15657979
Alignment:
Q  12 tgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||| ||||||||||||||| | |||||||||||| ||||||||||    
T  15657930 tgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagt 15657979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 20242738 - 20242682
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||| ||||||||| |||||  |||||||||| |||||| ||||    
T  20242738 gtgtcggtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagt 20242682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30404865 - 30404813
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatc 53  Q
    ||||||||||| |||||||||||||| ||||||||||  ||||| ||||||||    
T  30404865 acaagtgtcggcgtcggacacgacacatgtccgacaccaggacatgcctaatc 30404813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 34784982 - 34784926
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||| ||||||||||||| |||| ||||| ||||||||||| || ||||||||    
T  34784982 gtgtcggtatcggacacgacacctgtctgacacggggacacgccttattcgaggagt 34784926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 36096375 - 36096331
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcct 49  Q
    |||||| |||||||||||||||||||| ||||| |||||||||||    
T  36096375 gtgtcgatgtcggacacgacacgtgtctgacacggggacacgcct 36096331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 44860379 - 44860449
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    |||| ||||| |||||||||| ||||||||||  ||||||| |||||| ||||||||   ||||||||||||||    
T  44860379 gtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagt---gtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 28412422 - 28412460
Alignment:
Q  22 gacacgtgtccgacactgggacacgcctaatccgaggag 60  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  28412422 gacacgtgtccgacactgggacacggctaattcgaggag 28412460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 14996222 - 14996174
Alignment:
Q  12 tgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||| ||||||||| ||||| || ||||||||||||||||||||    
T  14996222 tgtcggacac-acacgtgtctgacaccggaacacgcctaatccgaggagt 14996174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 4207915 - 4207947
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacac 37  Q
    |||||||||||||||||||||||||| ||||||    
T  4207915 gtgtcggtgtcggacacgacacgtgttcgacac 4207947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 21782815 - 21782744
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||| |||||| | |||||||||||||| |||| |||||||| |||||| | ||   ||||||||||||||||||    
T  21782815 gtgttggtgtcaggcacgacacgtgtccaacaccgggacacgtctaatctgtgg---agtgtccgtgcttcatag 21782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 32749825 - 32749781
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcct 49  Q
    |||||| ||||||||  |||| |||||||||||||||||||||||    
T  32749825 gtgtcgatgtcggacgtgacatgtgtccgacactgggacacgcct 32749781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43586020 - 43585984
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacac 37  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  43586020 acaagtgtcggtgtcggacacgatacgtgtcagacac 43585984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 8365519 - 8365463
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8365519 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 8365463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 10339125 - 10339054
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||   |||| ||||||||||||||||||    
T  10339125 gtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatc---ggaggagtgtccgtgcttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28152142 - 28152202
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  28152142 acaagtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagt 28152202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34595178 - 34595253
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||   ||||||||||||||||||    
T  34595178 acaagtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgagg---agtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17841604 - 17841530
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||   |||||||||||||||||    
T  17841604 acaagtgacggtgtcggacacgacatgtgtccgacactgagacacgcctaatccgagg---agtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4877987 - 4878061
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||   ||||||||||||||||||    
T  4877987 acaagtgtcggtgtcggacacgacacatgtccgacac-aggacacgcctaatccgagg---agtgtccgtgcttcatag 4878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 16766756 - 16766829
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagca 81  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |   | ||||||||||||||||||    
T  16766756 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaag---aatgtccgtgcttcatagca 16766829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 17327655 - 17327590
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||   ||||||||||||||||||    
T  17327655 gtgtcggacacgacacgtgtctgacacagggacacgcctaatccgagg---agtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32978914 - 32978842
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttca 76  Q
    |||||||||||||||||||||||||| |||||||||| |||||||| ||||||| |||   |||||||||||||||    
T  32978914 acaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaagg---agtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28715339 - 28715395
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgag 57  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  28715339 acaagtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgag 28715395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 31384984 - 31385048
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    |||| ||||||||||||||||| |||| |||||||||||||||| |||   |||||||||||||||||    
T  31384984 gtgttggacacgacacgtgtcctacaccgggacacgcctaatccaagg---agtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 3209447 - 3209503
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||| |||||| |||||||||| |||||||||  ||||||||||||||||||||||    
T  3209447 gtgtcagtgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagt 3209503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 5970108 - 5970052
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||| | |||||||  |||||||||| ||||||||||||    
T  5970108 gtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagt 5970052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 7248417 - 7248488
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||| |||||| ||| ||||||||||| |||||||| | |||||||||   ||||||||||||||||||    
T  7248417 gtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgagg---agtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 8714039 - 8714095
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||| | |||||||  |||||||||| ||||||||||||    
T  8714039 gtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagt 8714095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 8776967 - 8776908
Alignment:
Q  17 gacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||| | ||||| ||||||||||||   ||||||||||||||||||    
T  8776967 gacacgacacgtgtccgacaccgagacacacctaatccgagg---agtgtccgtgcttcatag 8776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 9107370 - 9107314
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||| ||  ||||||||||| ||||||| |||||||||||||||    
T  9107370 gtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagt 9107314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 18367895 - 18367966
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||| |||||||||| |||| ||||| ||||||||||| |||| |||   ||||||||||||||||||    
T  18367895 gtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaagg---agtgtccgtgcttcatag 18367966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24645525 - 24645585
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||| |||||||||||||||||||||   |||||| ||||||||| ||||    
T  24645525 acaagtgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagt 24645585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 17435259 - 17435306
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatc 53  Q
    ||||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  17435259 tgtcgatgtcggacacgacacgtgttcgacactgggacacgtctaatc 17435306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 9629448 - 9629498
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||| ||| ||||||||||||| |||||| ||||||||||||||    
T  9629448 gtgtcggacacaacatgtgtccgacactgagacacgtctaatccgaggagt 9629498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 16488590 - 16488536
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgagga 59  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||| |||| ||||    
T  16488590 gtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaagga 16488536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 853874 - 853821
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    |||||||||||||||||| |||||| ||||||||||  | ||||||||||||||    
T  853874 acaagtgtcggtgtcggatacgacatgtgtccgacatagagacacgcctaatcc 853821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 9522950 - 9522999
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    ||||||||||||||  ||||||||||||||||| | ||||||||||||||    
T  9522950 gtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaatcc 9522999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6898296 - 6898236
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||||  ||||||| |||| |  ||||||||||||||| ||||    
T  6898296 acaagtgtcggtgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagt 6898236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 7378027 - 7378098
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||| |  |||||||| |||||||| ||||||    ||| ||||||||||||||||||    
T  7378027 gtgtcggtgtcggacacgacatgcatccgacaccgggacacggctaatc---tgagaagtgtccgtgcttcatag 7378098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16833352 - 16833412
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||  ||||||||||| |||||||||  |||||| || ||||||||||||    
T  16833352 acaagtgtcggtgttagacacgacacgcgtccgacaccaggacacaccgaatccgaggagt 16833412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 21044872 - 21044837
Alignment:
Q  18 acacgacacgtgtccgacactgggacacgcctaatc 53  Q
    |||||||| |||||||||||||||||||||||||||    
T  21044872 acacgacatgtgtccgacactgggacacgcctaatc 21044837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 31959214 - 31959268
Alignment:
Q  21 cgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    ||||| ||||||||||| ||||||| ||||||||||||   |||||||||||||||||    
T  31959214 cgacatgtgtccgacaccgggacacacctaatccgagg---agtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 12696383 - 12696433
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||||||| ||||| ||||||| ||| |||| ||||||    
T  12696383 gtgtcggacacgacacgtgtctgacaccgggacacaccttatccaaggagt 12696433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23771622 - 23771672
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaa 51  Q
    |||| |||||||||||||||||||| ||||||||||| | |||||| ||||    
T  23771622 acaaatgtcggtgtcggacacgacatgtgtccgacacagagacacgtctaa 23771672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 8389478 - 8389411
Alignment:
Q  6 tgtcggtgtcggacacgacacg-tgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttca 76  Q
    |||||||||||||| | ||||| |||||||||| ||||||| ||||||||||||   |||||||||||||||    
T  8389478 tgtcggtgtcggac-caacacggtgtccgacaccgggacacacctaatccgagg---agtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 9658928 - 9658998
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    |||||||||  ||||||||||||||| ||||| || ||||||||||| | |  || |||||||||||||||||    
T  9658928 tgtcggtgttagacacgacacgtgtctgacaccggaacacgcctaattcca--aggagtgtccgtgcttcata 9658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 13360361 - 13360313
Alignment:
Q  28 tgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||| |||||||||||||||| |   ||||||||||||||||||    
T  13360361 tgtccgacactgagacacgcctaatccgaag---agtgtccgtgcttcatag 13360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 21068128 - 21068095
Alignment:
Q  20 acgacacgtgtccgacactgggacacgcctaatc 53  Q
    |||||| |||||||||||||||||||||||||||    
T  21068128 acgacatgtgtccgacactgggacacgcctaatc 21068095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 29020966 - 29021011
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccga 56  Q
    |||||||||||||||||||| |||||| | | ||||||||||||||    
T  29020966 gtgtcggacacgacacgtgttcgacaccgaggcacgcctaatccga 29021011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 33001300 - 33001251
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    ||||||||||||||||||||||||||| ||||| |  | |||||||||||    
T  33001300 gtgtcggtgtcggacacgacacgtgtctgacaccgaaatacgcctaatcc 33001251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1315976 - 1316032
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgag 57  Q
    ||||||||||||||||| |||| || |||||||||||  | |||||||||| |||||    
T  1315976 acaagtgtcggtgtcgggcacgtcatgtgtccgacaccagaacacgcctaacccgag 1316032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 9025495 - 9025448
Alignment:
Q  26 cgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttca 76  Q
    |||||||||||| ||||||||||||||||   ||| |||||||||||||||    
T  9025495 cgtgtccgacaccgggacacgcctaatcc---gagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 10294166 - 10294222
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||| |||||||||||||||| |||||||| ||| ||||||  |||||| |||||||    
T  10294166 gtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaatctgaggagt 10294222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 12627588 - 12627536
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgag 57  Q
    |||||| |||||||||| |||| |||||||||| | ||||| |||||||||||    
T  12627588 gtgtcgatgtcggacaccacacatgtccgacaccgagacactcctaatccgag 12627536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 477 - 403
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||   |||||||||||||||||    
T  477 acaagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgagg---agtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 598254 - 598328
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||   ||| |||||||||||||||||||    
T  598254 aagtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatcc---gagaagtgtccgtgcttcatagc 598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 5409836 - 5409771
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||    
T  5409836 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagg---agtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21880196 - 21880271
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||||||||||   ||| ||||||||||||||||||    
T  21880196 acaagtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatcc---gagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 24339701 - 24339757
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  24339701 gtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagt 24339757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 15680855 - 15680928
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||   ||||||||||||||||||    
T  15680855 aagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgagg---agtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21864852 - 21864928
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||   |||||| ||||||||||||    
T  21864852 acaagtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgagg---agtgtctgtgcttcatagc 21864928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 32287474 - 32287404
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    |||||||||||||||| |||| ||||||||||| ||||||| ||||||||||||   |||||||||||||||||    
T  32287474 gtgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgagg---agtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 43027469 - 43027403
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||| |   |||||||||||||||||||    
T  43027469 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatg---agtgtccgtgcttcatagc 43027403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 9778559 - 9778624
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| |||   ||||||||||||||||||    
T  9778559 gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaagg---agtgtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 20549839 - 20549895
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||| |||| ||||||||| || |||||||||||||||||||||    
T  20549839 gtgtcggtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagt 20549895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 32094020 - 32093969
Alignment:
Q  11 gtgtcggacacgacacgtgtccgaca-ctgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagt 32093969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 1433513 - 1433586
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagcacgtaac 87  Q
    |||||||||| |||| |||||||||||  ||||||| |||||||||||   |||||||||||||||||||| |||||    
T  1433513 gtgtcggacaagacatgtgtccgacaccaggacacgtctaatccgagg---agtgtccgtgcttcatagcatgtaac 1433586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 7133284 - 7133212
Alignment:
Q  5 gtgtcggtgtcggacac-gacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||| ||||   || |||||||||||||||    
T  7133284 gtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgagg---agcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8234190 - 8234243
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    ||||||| |||||||||||||||||| |||||||||| | ||||||||||||||    
T  8234190 acaagtgccggtgtcggacacgacacatgtccgacaccgagacacgcctaatcc 8234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24105722 - 24105782
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||| ||||| ||| ||| ||||||||||| ||||||||||||| |||||||||    
T  24105722 acaagtgtcggagtcgggcacaacatgtgtccgacaccgggacacgcctaacccgaggagt 24105782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 29763187 - 29763128
Alignment:
Q  18 acacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||||||||||||||||||   |||||||||||||||||||   |||||||||||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgagg---agtgtccgtgcttcatagc 29763128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33994256 - 33994316
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||| |||||||||| ||||| |||| | |||||||||||||| ||||||    
T  33994256 acaagtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagt 33994316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 2334314 - 2334364
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||| ||||||||||||  ||||| ||||||||||||||    
T  2334314 gtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagt 2334364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 13770750 - 13770800
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||| ||||||||||||||| || ||||||||||||||| ||||    
T  13770750 gtgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagt 13770800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 18213044 - 18212972
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||||||||||||||||||| | | || ||||| ||||||||||| ||||||||   |||||| ||||||||||||    
T  18213044 gtgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgagg---agtgtctgtgcttcatagc 18212972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 26733352 - 26733405
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgagg 58  Q
    |||||||||||||||||||| | ||||||| || || |||||||||||||||||    
T  26733352 gtgtcggtgtcggacacgacgcatgtccgatacgggaacacgcctaatccgagg 26733405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 17852056 - 17852119
Alignment:
Q  13 gtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||| |||||||||||||||| | ||||| |||||| |||||   ||||||||||||||||||    
T  17852056 gtcggacatgacacgtgtccgacaccgagacacacctaattcgagg---agtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 26033461 - 26033405
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||| |||| ||||||||||||| || | ||||| |||||||||||||||    
T  26033461 gtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagt 26033405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 32308179 - 32308235
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||| ||||||||||| |||||||||| | |||||  ||||||||||||||    
T  32308179 gtgtcggtgttggacacgacacatgtccgacaccgagacacagctaatccgaggagt 32308235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 7438766 - 7438836
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||  ||||||||| ||| ||||||| ||||||||||||| | |||   ||||||||||||||||||    
T  7438766 tgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaagg---agtgtccgtgcttcatag 7438836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 6490786 - 6490835
Alignment:
Q  27 gtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||| ||||||||| ||||||||||   ||||||||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgagg---agtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 14729770 - 14729823
Alignment:
Q  24 cacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||||||||||||| ||||||||| ||||||||||   ||||||||| |||||||||    
T  14729770 cacgtgtccgacaccgggacacgcttaatccgagg---agtgtccgtacttcatagc 14729823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 27093422 - 27093368
Alignment:
Q  7 gtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||  ||||||||| |||||||||||| |||||| |||||||||| ||||    
T  27093422 gtcggtgttagacacgacatgtgtccgacactaggacacacctaatccgatgagt 27093368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 27184879 - 27184933
Alignment:
Q  7 gtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||  ||||||||| |||||||||||| |||||| |||||||||| ||||    
T  27184879 gtcggtgttagacacgacatgtgtccgacactaggacacacctaatccgatgagt 27184933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 3294300 - 3294259
Alignment:
Q  20 acgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||| |||| |||||||||||||||||| ||||    
T  3294300 acgacacgtgtccaacaccgggacacgcctaatccgaagagt 3294259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 6028684 - 6028741
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagta 62  Q
    ||||| |||||| |||||||||| || |||||||| ||||||||||||| || |||||    
T  6028684 gtgtcagtgtcgaacacgacacgagttcgacactgagacacgcctaatctgaagagta 6028741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7197312 - 7197271
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactggga 42  Q
    ||||||||||||||||||||| |||| |||||||||| ||||    
T  7197312 acaagtgtcggtgtcggacacaacacatgtccgacaccggga 7197271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 3991392 - 3991435
Alignment:
Q  36 actgggacacgcctaatccgaggagtagtgtccgtgcttcatagcac 82  Q
    |||||||||||||||||||||||   |||||||| ||||||||||||    
T  3991392 actgggacacgcctaatccgagg---agtgtccgggcttcatagcac 3991435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25956489 - 25956536
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcct 49  Q
    ||||||||||||||||||||||| || |||| ||||| |||||||||||    
T  25956489 acaagtgtcggtgtcggacacgatacatgtcggacac-gggacacgcct 25956536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 40131989 - 40131938
Alignment:
Q  26 cgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||||||||||| |||||||| |||||||||||   |||||| ||||||||||||    
T  40131989 cgtgtccgacacagggacacgtctaatccgagg---agtgtctgtgcttcatagc 40131938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5051 - 4975
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||||||||||||   |||||| ||||||||||||    
T  5051 acaagtgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgagg---agtgtctgtgcttcatagc 4975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 22652035 - 22652107
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||||||   |||||||||||||||||||    
T  22652035 gtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgagg---agtgtccgtgcttcatagc 22652107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 29510305 - 29510233
Alignment:
Q  4 agtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||   ||||||||||||||||||    
T  29510305 agtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgagg---agtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5813636 - 5813696
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  5813636 acaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagt 5813696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 36450769 - 36450693
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||||||| ||||||||||||||| ||||||||||||  |||||||||||||||||||   |||||| ||||||||||||    
T  36450769 acaagtgtaggtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgagg---agtgtctgtgcttcatagc 36450693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 34451032 - 34450961
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||   ||||||||||||||||||    
T  34451032 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaagg---agtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40332235 - 40332295
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||    
T  40332235 acaagtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagt 40332295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 3025599 - 3025668
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 77  Q
    ||||| ||||||||||||||||||||| ||||||| |||||| |||||||||||   ||||||||||||||||    
T  3025599 gtgtcagtgtcggacacgacacgtgtctgacactgtgacacggctaatccgagg---agtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 15816129 - 15816057
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||| ||||||||||||||||||  |||||||| ||||||||||||||||   ||| |||||||||||||||||||    
T  15816129 gtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatcc---gagaagtgtccgtgcttcatagc 15816057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 22943349 - 22943304
Alignment:
Q  16 ggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  22943349 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggagt 22943304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 926801 - 926730
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 77  Q
    ||||||||||||||||| ||||||||||||||||| |||||| || | ||||||||   ||||||||||||||||    
T  926801 aagtgtcggtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgagg---agtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18407763 - 18407838
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||| || |||||||||||| ||||||||||| |||||||||||||    |||| ||||||||||||||||||    
T  18407763 acaagtgtcgctgccggacacgacacatgtccgacactaggacacgcctaat---tggaggagtgtccgtgcttcatag 18407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 8343381 - 8343431
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||| ||||    
T  8343381 gtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagt 8343431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 29447109 - 29447040
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    |||||||||||||||||||| ||||| |||||  ||||||||||||||| |||   |||||||||||||||||    
T  29447109 tgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctagg---agtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 3951547 - 3951475
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||||||||| ||||||||||||||| ||||| || ||||||||||||| |||   ||| |||||||||||||||    
T  3951547 gtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaagg---agtttccgtgcttcatagc 3951475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 21465471 - 21465543
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||| |||||||||||||||||||||| |||| |||| |||||||||  ||||   |||||||||||||||||||    
T  21465471 gtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgagg---agtgtccgtgcttcatagc 21465543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 126358 - 126302
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||| |||||||||||||||||||||| | || |||||||| ||||||||||||||    
T  126358 gtgtcagtgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagt 126302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15023272 - 15023212
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||| ||||||| |||||||||||||||  |||| ||||| ||||||||||||||    
T  15023272 acaagtgtcgatgtcggatacgacacgtgtccgatgctggaacacgtctaatccgaggagt 15023212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 29447503 - 29447574
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||| ||||||||| ||||||||||| |||||| | ||||||   |||| ||||||||||||||||||    
T  29447503 gtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatc---ggaggagtgtccgtgcttcatag 29447574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 43737822 - 43737752
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||| ||||| ||||| |||| |||||| |||| |||   |||||||||||||||||    
T  43737822 gtgtcggtgtcggacacgacaggtgtctgacacggggatacgccttatccaagg---agtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 44462206 - 44462151
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggag 60  Q
    ||||||||||| ||||||| || |||||||||| |||||||| |||||||||||||    
T  44462206 gtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44462151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 44469739 - 44469684
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggag 60  Q
    ||||||||||| ||||||| || |||||||||| |||||||| |||||||||||||    
T  44469739 gtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44469684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 20679408 - 20679350
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||| ||| | ||||||||||||||| ||||||||||| | |||||||||    
T  20679408 aagtgtcggtgtcagacgcaacacgtgtccgacaccgggacacgccttaaccgaggagt 20679350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 26902169 - 26902104
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||| | ||| ||||||||||| ||| ||||   ||||||||||||||||||    
T  26902169 gtgtcggacacgacacgtgtctggcacggggacacgccttatctgagg---agtgtccgtgcttcatag 26902104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31557040 - 31557093
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    |||||| |||||||| |||||||||| ||||||||||  |||||||||||||||    
T  31557040 acaagtttcggtgtcagacacgacacatgtccgacaccaggacacgcctaatcc 31557093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 11803318 - 11803389
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||| ||||| ||| ||||||| |||||||||| || ||||| |||||||||||   ||||||||||||||||||    
T  11803318 gtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatccgagg---agtgtccgtgcttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 14134748 - 14134819
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||||||||  |||||||||||||||| |||  ||||||||||||| |||||   |||||||||| ||||||||    
T  14134748 tgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgagg---agtgtccgtgtttcatagc 14134819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 26915246 - 26915202
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcct 49  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||||    
T  26915246 gtgtcggtgtcggacacgatacgtgtcagacattgggacacgcct 26915202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 39820482 - 39820548
Alignment:
Q  11 gtgtcggacac-gacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||   ||| |||||||||||||||||||    
T  39820482 gtgtcggacaccgacgcgtgtccgacac-gggacacgcctaatcc---gagaagtgtccgtgcttcatagc 39820548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 6065650 - 6065584
Alignment:
Q  12 tgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagca 81  Q
    ||||||||||||||| |||||||||| || |||||| |||| | |||   ||||||||||||||||||||    
T  6065650 tgtcggacacgacacatgtccgacaccggaacacgcataattcaagg---agtgtccgtgcttcatagca 6065584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 24413572 - 24413498
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||||| |||||||||||||  ||||||| |||  |||||||| |||||||   ||| |||||||||||||||||||    
T  24413572 aagtgtcagtgtcggacacgatgcgtgtccaacagcgggacacgtctaatcc---gagaagtgtccgtgcttcatagc 24413498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 16641974 - 16641924
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||| |||||  |||| ||||||| |||||||||||||||    
T  16641974 gtgtcggacacgacatgtgtctaacaccgggacacacctaatccgaggagt 16641924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 22197736 - 22197686
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||| |||||||||||||||| ||  ||||||||||| |||||||    
T  22197736 gtgtcggacatgacacgtgtccgacaccggatcacgcctaatctgaggagt 22197686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 24858070 - 24858120
Alignment:
Q  11 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||| |||||| || | ||||||||||||||| |||||||    
T  24858070 gtgtcggacacgacatgtgtcccacgccgggacacgcctaatcagaggagt 24858120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 30068017 - 30067968
Alignment:
Q  27 gtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||| |||||||||| |   ||||||||||||||||||    
T  30068017 gtgtccgacactgggacacacctaatccgatg---agtgtccgtgcttcatag 30067968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 33405395 - 33405322
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagca 81  Q
    |||||||||||||||||||||| |||| |||||  ||||||| ||||||| | |   |||||||||||| |||||||    
T  33405395 gtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatg---agtgtccgtgctccatagca 33405322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 12570506 - 12570461
Alignment:
Q  8 tcggtgtcggacacgacacgtgtccgacactgggacacgcctaatc 53  Q
    |||||||| ||||| |||||||||||||||  ||||||||||||||    
T  12570506 tcggtgtcagacactacacgtgtccgacaccaggacacgcctaatc 12570461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 12570732 - 12570687
Alignment:
Q  8 tcggtgtcggacacgacacgtgtccgacactgggacacgcctaatc 53  Q
    |||||||| ||||| |||||||||||||||  ||||||||||||||    
T  12570732 tcggtgtcagacactacacgtgtccgacaccaggacacgcctaatc 12570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 17751703 - 17751760
Alignment:
Q  5 gtgtcggtgtcggacac-gacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||| ||| | |  ||||||| |||||||||||||||||||||||    
T  17751703 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagt 17751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 17760690 - 17760747
Alignment:
Q  5 gtgtcggtgtcggacac-gacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||| ||| | |  ||||||| |||||||||||||||||||||||    
T  17760690 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagt 17760747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 20873113 - 20873146
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccga 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  20873113 acaagtgtcggtgtcggacacgatacgtgtccga 20873146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 28745557 - 28745629
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||||||||||||||||||||| |||||| ||| | |||| | ||||| | |||   |||||||||||||||||||    
T  28745557 gtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaattcaagg---agtgtccgtgcttcatagc 28745629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 2572056 - 2572016
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacac 45  Q
    ||||| |||||||||||||||||||||||| || |||||||    
T  2572056 gtgtctgtgtcggacacgacacgtgtccgataccgggacac 2572016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 24205819 - 24205763
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||| |||| || | |||| ||||| || ||||||||||||||||||||    
T  24205819 gtgtcggtgtcgaacacaacgcatgtctgacaccggaacacgcctaatccgaggagt 24205763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 31109501 - 31109473
Alignment:
Q  33 gacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||||||||||    
T  31109501 gacactgggacacgcctaatccgaggagt 31109473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8842 - 8902
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||    
T  8842 acaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagt 8902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 241653 - 241724
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||   ||| ||||||||||||||||||    
T  241653 gtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatcc---gagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3352 - 3427
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||| |||||||||| ||||||||   ||||||||||||||||||||||||||   ||||||||||||||||||    
T  3352 acaagtgtcagtgtcggacaagacacgtggtggacactgggacacgcctaatccgagg---agtgtccgtgcttcatag 3427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 8635 - 8564
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||||| |||||   ||||||||||||||||||    
T  8635 gtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgagg---agtgtccgtgcttcatag 8564  T

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Target: scaffold0019 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 71784 - 71840
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  71784 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagt 71840  T

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Target: scaffold0050 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 70324 - 70382
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||||||||||||||||||||||||||||||||||  ||||| ||||||||||| ||||    
T  70324 aagtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagt 70382  T

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Target: scaffold0380 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 8649 - 8720
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||| |||| | ||||||||||||||||||||||||| ||||||||||| |||   ||||||||||||||||||    
T  8649 gtgtctgtgttgaacacgacacgtgtccgacactgggatacgcctaatccaagg---agtgtccgtgcttcatag 8720  T

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Target: scaffold0793 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 4879 - 4821
Alignment:
Q  18 acacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||| |||||||||| ||||||||||||||||||||   ||||||||||||||||||    
T  4879 acacgacacatgtccgacacagggacacgcctaatccgagg---agtgtccgtgcttcatag 4821  T

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Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 13454 - 13523
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 77  Q
    ||||||||||||||||||||||| ||| |||||| |||||| |||||||| |||   ||||||||||||||||    
T  13454 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaagg---agtgtccgtgcttcat 13523  T

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Target: scaffold0152 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 21873 - 21804
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 77  Q
    ||||||||||||||||||||||| ||| |||||| |||||| |||||||| |||   ||||||||||||||||    
T  21873 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaagg---agtgtccgtgcttcat 21804  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 92875 - 92940
Alignment:
Q  10 ggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 78  Q
    ||||||||||||||||| |||| |||||  |||||||||||||||||||   |||||||||||||||||    
T  92875 ggtgtcggacacgacacatgtcggacacctggacacgcctaatccgagg---agtgtccgtgcttcata 92940  T

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Target: scaffold0086 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 2987 - 3059
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    |||||||| || |||||||||||||| |||||| || |||||||||||||||||   |||||||||||| ||||||    
T  2987 gtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgagg---agtgtccgtgctccatagc 3059  T

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Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45545 - 45492
Alignment:
Q  1 acaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    ||||||||||||||||||||||||||||||| ||||| | |||| |||||||||    
T  45545 acaagtgtcggtgtcggacacgacacgtgtctgacaccgcgacatgcctaatcc 45492  T

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Target: scaffold0136 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 3849 - 3793
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    |||| ||||||||||||||||| |||||||||  | |||||||||||||||||||||    
T  3849 gtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagt 3793  T

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Target: scaffold0697 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 1690 - 1733
Alignment:
Q  3 aagtgtcggtgtcggacacgacacgtgtccgacactgggacacg 46  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  1690 aagtgtcggtgtcggacacgacacatgtccgacactaggacacg 1733  T

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Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 14580 - 14623
Alignment:
Q  10 ggtgtcggacacgacacgtgtccgacactgggacacgcctaatc 53  Q
    |||||||||||||||||||||||||||| | |||||||||||||    
T  14580 ggtgtcggacacgacacgtgtccgacaccgagacacgcctaatc 14623  T

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Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 24083 - 24155
Alignment:
Q  5 gtgtcggtgtcggacacgacac--gtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    ||||||||||||||||| ||||  |||||||||||| ||||||||||||||||| |   ||||||||||||||||||    
T  24083 gtgtcggtgtcggacacaacacgtgtgtccgacact-ggacacgcctaatccgatg---agtgtccgtgcttcatag 24155  T

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Target: scaffold0154 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 13472 - 13545
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagca 81  Q
    |||||||||||||||||||||||| | |||||  |||| || ||||||||||||   ||||||||| ||||||||||    
T  13472 gtgtcggtgtcggacacgacacgtatacgacatcgggatacacctaatccgagg---agtgtccgtacttcatagca 13545  T

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Target: scaffold0279 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 17877 - 17840
Alignment:
Q  8 tcggtgtcggacacgacacgtgtccgacactgggacac 45  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  17877 tcggtgttggacacgacacgtgtccgacactgggacac 17840  T

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Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 20238 - 20279
Alignment:
Q  38 tgggacacgcctaatccgaggagtagtgtccgtgcttcatag 79  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  20238 tgggacacgcctaatccgaggagtacagtccgtgcttcatag 20279  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 53239 - 53280
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacg 46  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  53239 gtgtcggtgtcggacatgacacgtgtccgacaccgggacacg 53280  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 263372 - 263316
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||||| |||||||||||||| ||| ||   |||||||||||||||||||||    
T  263372 gtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagt 263316  T

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Target: scaffold0123 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 44525 - 44486
Alignment:
Q  5 gtgtcggtgtcggacacgacacgtgtccgacactgggaca 44  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  44525 gtgtcggtgttggacacaacacgtgtccgacactgggaca 44486  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 23573 - 23619
Alignment:
Q  8 tcggtgtcggacacgacacgtgtccgacactgggacacgcctaatcc 54  Q
    |||||||||||||||| | |||||||| |||||||||||| ||||||    
T  23573 tcggtgtcggacacgatatgtgtccgagactgggacacgcataatcc 23619  T

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Target: scaffold0623 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 5993 - 5940
Alignment:
Q  8 tcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 61  Q
    ||||||||| |||||||||||||| ||||| | ||||||||| |||| ||||||    
T  5993 tcggtgtcgaacacgacacgtgtctgacacagagacacgccttatccaaggagt 5940  T

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Target: scaffold0246 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 19629 - 19682
Alignment:
Q  6 tgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgagga 59  Q
    ||||||||| |||||||||||||||||||||| |  |||| | |||||||||||    
T  19629 tgtcggtgttggacacgacacgtgtccgacaccgaaacacacttaatccgagga 19682  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 26046 - 26099
Alignment:
Q  27 gtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 80  Q
    ||||||||||  ||||||||||||| | |||||| |||||||| ||||||||||    
T  26046 gtgtccgacatcgggacacgcctaagctgaggaggagtgtccgggcttcatagc 26099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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