View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18322_low_20 (Length: 300)
Name: NF18322_low_20
Description: NF18322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18322_low_20 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 4613724 - 4613431
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4613724 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
4613625 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4613624 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatc |
4613525 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||| || ||||| | ||||| |||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
4613524 |
cgccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattaggcctctatctgaaatttcattcacaaactctgatgacaa |
4613431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 4585762 - 4586055
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| ||| ||| |
|
|
| T |
4585762 |
ctctcccaccatcaattcattgaccaacttctccacctcctctctcttcacattggtgtcaacttccatcccaatctcccattcattgcaaataattcta |
4585861 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
||||||| ||||||||| || | |||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
4585862 |
cagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacagtgagtcaagaatc |
4585961 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4585962 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcgattaggcctctatctgaaatttcattcttaaactcagatgacaa |
4586055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 9 - 294
Target Start/End: Original strand, 4557259 - 4557544
Alignment:
| Q |
9 |
ccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgc |
108 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||||||||||||||| |
|
|
| T |
4557259 |
ccatcaattcattgaccaaattctctacctcatctctcttcacattggtgtcaatttccatgccaatctcccatgtattgcaaatatatctgcagtttgc |
4557358 |
T |
|
| Q |
109 |
tggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaatt |
208 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4557359 |
tggctgatcagcaaaaaatggccaacacaacattggaactccagcagatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaatt |
4557458 |
T |
|
| Q |
209 |
gaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
4557459 |
gaaggatggtttaatacttgctcttgcgggcaccagcccgcgattaggcctctatctgaaatttcattgacaaactccgatgacaa |
4557544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 4579558 - 4579851
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||||| || ||||||| |||| |||||||| ||||||| |
|
|
| T |
4579558 |
ctctcccaccatcaattcattaaccagcttctccacctcctctctcttcacattagtgtcgatttcaattccaattttccatgtattgcataaatatctg |
4579657 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
||| || |||| ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||||||| |||||||||||||||| |
|
|
| T |
4579658 |
cagcttactgggtgatcagcgaaaaatggccaacacaacattggaactccagcagatatgctttcagtgattgagttccatccgcaatgagtcaagaatc |
4579757 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||| | | || |||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
4579758 |
caccaattgaagggtggttcagtacttgctcttgcggacaccagctcgttattaggcctctatctgaaatttcattcacaaactccgatgacaa |
4579851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 4592357 - 4592650
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
||||||||||||||||||||||| || ||||| ||||| |||||||| ||||| || ||||||||||||||||| |||||||||||| | ||| ||| |
|
|
| T |
4592357 |
ctctcccaccatcaattcattgataagtttctccacctcctctctctttacattcgtatcaatttccatcccaatctcccattcattgtaaataagtcta |
4592456 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
||||||| ||||||||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4592457 |
cagtttgttggctgatcactaaagaatggccaacacaacattggaattccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatc |
4592556 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| || ||||| | ||||| | |||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
4592557 |
caccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattacgcctctatctgaaatttcattcacaaactccgatgacaa |
4592650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 2 - 294
Target Start/End: Original strand, 4571099 - 4571391
Alignment:
| Q |
2 |
tctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgc |
101 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||| |||||||||||| || || ||||| || ||||| |||||| |||||| |||||||| | |
|
|
| T |
4571099 |
tctcccaccatcaattcattgaccaaattctccacctcatttctcttcacattagtatcgatttcgattccaatctcccatgtattgcagatatatctac |
4571198 |
T |
|
| Q |
102 |
agtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatcc |
201 |
Q |
| |
|
|||||||||||||||| || ||||||||| ||||||||||||||||||||| | |||| ||||| | ||||||||||||||||| ||||||||||| || |
|
|
| T |
4571199 |
agtttgctggctgatcagcaaaaaatggctaacacaacattggaactccagtagatatgctttcggtcgttgagttccatccacagtgagtcaagaaacc |
4571298 |
T |
|
| Q |
202 |
accaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||| ||||||||| || || |||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
4571299 |
accaattgaaggatggttcaatactttctcttgcgagcaccaaccagcaattaggcctctatctgaaatttcattcacaaactccgatgacaa |
4571391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 10 - 294
Target Start/End: Original strand, 4598306 - 4598590
Alignment:
| Q |
10 |
catcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgct |
109 |
Q |
| |
|
||||||||| |||||||||||||| ||||| |||||||||||||| || ||||||| || ||||| |||||||||||||| |||||||||||||| ||| |
|
|
| T |
4598306 |
catcaattcgttgaccagcttctccacctcctctctcttcacattagtttcaattttgattccaatctcccattcattgcaaatatatctgcagttggct |
4598405 |
T |
|
| Q |
110 |
ggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaattg |
209 |
Q |
| |
|
|||||||||||||||| || |||||||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
4598406 |
tgctgatccgcgaaaaagggacaacacaacattggcactccggcacatatactttcagtggttgagttccatccgcaatgagttaagaatccaccaattg |
4598505 |
T |
|
| Q |
210 |
aagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
|||| ||||| ||||||||||||||| | ||||| | ||| | | |||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
4598506 |
aaggatggtttaatacttgctcttgcagacaccagcttgcaactaagcctctatctgaaatttcattcacaaactccgatgacaa |
4598590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 10 - 291
Target Start/End: Original strand, 4574443 - 4574724
Alignment:
| Q |
10 |
catcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgct |
109 |
Q |
| |
|
|||||||||||||||||| ||||| ||||| || ||||| ||||| || || |||||| | ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
4574443 |
catcaattcattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgct |
4574542 |
T |
|
| Q |
110 |
ggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaattg |
209 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| | || |
|
|
| T |
4574543 |
ggctgatccgaaaaaaatggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
4574642 |
T |
|
| Q |
210 |
aagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatga |
291 |
Q |
| |
|
|| ||||||||||||||| |||||| || ||||||| ||| || || ||||||||||||||||| ||| ||| |||||||| |
|
|
| T |
4574643 |
aaaggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatga |
4574724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 10 - 294
Target Start/End: Original strand, 4563846 - 4564130
Alignment:
| Q |
10 |
catcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgct |
109 |
Q |
| |
|
||||||||||||||| || ||||| ||||| |||||||| ||||| || || |||||||||||||| |||||||||||| | ||| ||| ||||||| | |
|
|
| T |
4563846 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
4563945 |
T |
|
| Q |
110 |
ggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaattg |
209 |
Q |
| |
|
|||||||| | || ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
4563946 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccgccaattg |
4564045 |
T |
|
| Q |
210 |
aagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
|||||||||||||||||| ||| || || ||||||| ||| || | |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4564046 |
aagggtggttcaatactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgacaa |
4564130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 4461249 - 4461542
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
|||||| ||||||||||| ||||||| |||||| |||||||| |||||||||| | || ||||| | ||||| ||||||| ||||| ||| |||| |
|
|
| T |
4461249 |
ctctccaaccatcaattcgttgaccaacttctccacctcatccctcttcacatctttatcgatttcaagtccaatctcccatttgttgcaaataaatcta |
4461348 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
||||||||||||||||| | || ||||||||||||||||| || |||||||||||||| ||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
4461349 |
cagtttgctggctgatcaccaaagaatggccaacacaacatcggcactccagcacatatgctttcagtggttgaattccatccacaatgagtcaagaatc |
4461448 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||| | ||| || |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4461449 |
caccaattgaagggtggttcagtacttgctcttgcggacaccagcttgctattaggcctctatctgaaatttcattcacaaactcagatgacaa |
4461542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 10 - 294
Target Start/End: Original strand, 4622277 - 4622561
Alignment:
| Q |
10 |
catcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgct |
109 |
Q |
| |
|
|||||||||||||| ||| ||| ||||| ||||| |||||||| || | ||||| || ||||| |||||| |||||| |||||||| ||||||| | |
|
|
| T |
4622277 |
catcaattcattgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgtt |
4622376 |
T |
|
| Q |
110 |
ggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaattg |
209 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||| | |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4622377 |
ggctgatcagcgaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattg |
4622476 |
T |
|
| Q |
210 |
aagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
||||||||| | ||||| |||||| || |||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
4622477 |
cagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaa |
4622561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 273
Target Start/End: Original strand, 4560641 - 4560904
Alignment:
| Q |
10 |
catcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgct |
109 |
Q |
| |
|
|||||||||||||||||| ||||| || || || ||||| ||||| || |||||||| | ||||| | |||||||||||| |||||||| ||||||||| |
|
|
| T |
4560641 |
catcaattcattgaccagtttctccacgtcctccctctttacatttgtatcaatttcgtttccaatcttccattcattgcaaatatatcttcagtttgct |
4560740 |
T |
|
| Q |
110 |
ggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaattg |
209 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| | || |
|
|
| T |
4560741 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
4560840 |
T |
|
| Q |
210 |
aagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttc |
273 |
Q |
| |
|
| |||||||||||||||| |||||| || ||||||| ||| || || ||||||||||||||||| |
|
|
| T |
4560841 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttc |
4560904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 11 - 294
Target Start/End: Original strand, 4601925 - 4602208
Alignment:
| Q |
11 |
atcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgctg |
110 |
Q |
| |
|
|||| |||||||| ||||||| | | ||| |||||||||||||| || || |||||||| ||||| ||||||||||| || ||| |||| ||||||| || |
|
|
| T |
4601925 |
atcacttcattgatcagcttcgccaactcctctctcttcacatttgtatcgatttccataccaatctcccattcattacaaataaatctacagtttgttg |
4602024 |
T |
|
| Q |
111 |
gctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaattga |
210 |
Q |
| |
|
||||||| || ||||| |||||||||||||| || |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| || || || |
|
|
| T |
4602025 |
gctgatcggcaaaaaaaggccaacacaacatcggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccgatcga |
4602124 |
T |
|
| Q |
211 |
agggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
|||||||||||| |||| |||||| || ||||||| ||| || ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4602125 |
agggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcatttgtaaactcagatgacaa |
4602208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 9 - 292
Target Start/End: Original strand, 4626085 - 4626368
Alignment:
| Q |
9 |
ccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgc |
108 |
Q |
| |
|
|||||||| |||||| ||| ||||||||| | || ||||||||||| | || |||||||| ||||| |||||||||||||| |||||||| || |||| |
|
|
| T |
4626085 |
ccatcaatgcattgatcagtttctctaccccctccctcttcacattagcatcgatttccattccaatctcccattcattgcaaatatatctacaatttgt |
4626184 |
T |
|
| Q |
109 |
tggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaatt |
208 |
Q |
| |
|
||||||||| || ||| ||||||||||| ||||||||||||||| ||||| |||||| |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4626185 |
tggctgatcagcaaaatttggccaacacagcattggaactccagcgcatatgctttcaatggttgagttccatccacaatgagttaagaatccaccaatt |
4626284 |
T |
|
| Q |
209 |
gaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgac |
292 |
Q |
| |
|
||||| ||||||| ||||| ||||||||| ||||| | |||||| ||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
4626285 |
gaaggatggttcagtactttctcttgcggacaccagcttgcgattaggcctctatctgaaatttcattctcaaactcggatgac |
4626368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 3171867 - 3172160
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
|||||||||||||||||| |||| ||| ||||||||||| ||||||| |||||||| ||||||||||||||||| | |||||| | ||| ||| ||| |
|
|
| T |
3171867 |
ctctcccaccatcaattcgttgatcagtttctctacctcccctctctttacattggtatcaatttccatcccaatcttccattcttggcaaataattcta |
3171966 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
| ||| | ||| ||||| || |||||||||| |||||||||||| | ||||||||||| |||||| | ||||||||||||||| || ||||||||||||| |
|
|
| T |
3171967 |
ctgttaggtggttgatcagcaaaaaatggcctacacaacattggcattccagcacatacactttccgtggttgagttccatccgcagtgagtcaagaatc |
3172066 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
| ||||||||||| |||||||| |||| ||||||||| ||||||| ||| || |||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
3172067 |
cgccaattgaaggatggttcaacactttctcttgcggacaccaacttgctattaggcctctatctgaaatttcattcacaaactccgatgacaa |
3172160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 4490361 - 4490068
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||| ||||||| ||||||||| |||||||| | ||| ||| ||| |
|
|
| T |
4490361 |
ctctcccaccatcaattcattgatcagtttctctacctcttctctctttacattggtatcaattttcatcccaatctcccattcttcgcaaataattcta |
4490262 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
| | | ||| ||||| || ||||||||||||||||||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||| |
|
|
| T |
4490261 |
ctgctaagtggttgatcagcaaaaaatggccaacacaacattggcactccagcacatatactctccatgattgagttccatccacaatgagtcaagaatc |
4490162 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
|||||||||||||||| |||||||| | |||||| || ||||||| ||| || || ||||||||||||||||| ||| ||| ||||||||||| |
|
|
| T |
4490161 |
caccaattgaagggtgattcaataccttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgacaa |
4490068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 4515127 - 4514834
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||| || ||||| |||||||||||||| | || ||||| |||||||| |||||||||||||| ||| |||| |
|
|
| T |
4515127 |
ctctcccaccatcaattcattgacaagcttttcaacctcctctctcttcacattcatatcgatttcgatcccaatctcccattcattgcaaataaatcta |
4515028 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
||||||| ||| ||||| | || ||| ||||||| | |||||| |||||||| ||||| || |||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
4515027 |
cagtttgttggttgatcaccaaagaattgccaacaaagcattggcactccagcgcatatgctctcagtggttgagttccatccgcaatgagtcaagaatc |
4514928 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
| |||||||||||||||||||| |||| |||||| || ||||||| ||| || ||||||||||||| |||||||||| ||||||||| ||||| |
|
|
| T |
4514927 |
cgccaattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatctgcaatttcattcacaaactcagacgacaa |
4514834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 16 - 294
Target Start/End: Complemental strand, 4260145 - 4259867
Alignment:
| Q |
16 |
ttcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgctggctga |
115 |
Q |
| |
|
|||||||| ||||||| | ||||||||||| |||||||| || | |||||| || ||||| |||||||| || || ||| |||| ||||||| ||||||| |
|
|
| T |
4260145 |
ttcattgatcagcttcgccacctcatctcttttcacattagtattaatttcaattccaatctcccattcgttacaaataaatctacagtttgttggctga |
4260046 |
T |
|
| Q |
116 |
tccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaattgaagggt |
215 |
Q |
| |
|
|| || ||||||||||||||||||||||||||| | ||||| || |||||| ||||||||||||||| |||||||| ||||||||||||| ||||| || |
|
|
| T |
4260045 |
tcagcaaaaaatggccaacacaacattggaacttcggcacaaatgctttcaatggttgagttccatccgcaatgagttaagaatccaccaactgaagagt |
4259946 |
T |
|
| Q |
216 |
ggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
|||||| ||||||||||||||| ||||| | ||||| ||||||||||| ||||||||| ||| ||||||||||||||| |
|
|
| T |
4259945 |
ggttcagtacttgctcttgcggacaccagctcgcgattaggcctctatccgaaatttcactctcaaactcagatgacaa |
4259867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 4267172 - 4266879
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| || ||||||||||||||||| || | ||||| | ||||| |||||||||| ||| ||| |||| |
|
|
| T |
4267172 |
ctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatctcccattcatagcaaataaatcta |
4267073 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
||||||| ||||||||| | || |||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||| |||||||||||||||| |
|
|
| T |
4267072 |
cagtttgttggctgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtggttgaattccatccgcaatgagtcaagaatc |
4266973 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
||||||| |||||||||||||| |||| ||||| || ||||||| ||| || || ||||||||||||||||| || ||| ||||||||||| |
|
|
| T |
4266972 |
caccaatcgaagggtggttcaacactttatcttgtggacaccaacttgctattagtcctctatctgaaatttctttaaaaaaatcagatgacaa |
4266879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 4469929 - 4470204
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||| | || ||||| | ||||| |||||||||||||| ||| |||| |
|
|
| T |
4469929 |
ctctccaaccatcaattcattgactagcttctccacctcatctctcttcacatctttatcgatttcaagtccaatctcccattcattgcaaataaatcta |
4470028 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
|| |||||| ||||||| | || |||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
4470029 |
caatttgctagctgatcaccaaagaatggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatc |
4470128 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcatt |
276 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||| || ||||| |||| |||||||||||||||||| |||| |
|
|
| T |
4470129 |
caccgattgaagggtggttcagtacttgctcttgaggacaccagttcacgattaggcctctatctgaaattccatt |
4470204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 4480819 - 4481112
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
||||||||||| ||||||||||| | | |||| || || ||||||||||||||||| || ||||| | ||||| |||||||||||||| ||| ||| |
|
|
| T |
4480819 |
ctctcccaccaacaattcattgattaacctctccacatcttctctcttcacattggtatcgatttcgagtccaatctcccattcattgcaaataattcta |
4480918 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
| ||| | ||||||||| || || |||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
4480919 |
cggttaggtggctgatcggcaaagaatggccaacacaacattggcactccagcacatacactttcagtggttgagttccatccgcaatgagtcaagaatc |
4481018 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
| || ||||||||||||||||| |||| |||||| || ||||||| ||| || |||||||||| ||||||||| ||| | ||||||||||||| |
|
|
| T |
4481019 |
cgccgattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatttgaaatttctttcaaatactcagatgacaa |
4481112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 291
Target Start/End: Original strand, 4617158 - 4617438
Alignment:
| Q |
11 |
atcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgctg |
110 |
Q |
| |
|
|||| |||||||| |||||| | | ||| |||||||||||||| || || |||||||| ||||| ||||||||||| || ||| |||| |||| || || |
|
|
| T |
4617158 |
atcacttcattgatcagctttgccaactcctctctcttcacattcgtatcgatttccataccaatctcccattcattacaaataaatctacagtctgttg |
4617257 |
T |
|
| Q |
111 |
gctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaattga |
210 |
Q |
| |
|
|||| || || ||||||||||||||||||||||| |||||||| ||||||||||||| |||||| |||||||| ||||||||||||||||| || ||||| |
|
|
| T |
4617258 |
gctggtcggcaaaaaatggccaacacaacattggcactccagcgcatatactttcagtggttgaattccatccgcaatgagtcaagaatcctccgattga |
4617357 |
T |
|
| Q |
211 |
agggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatga |
291 |
Q |
| |
|
|||||||||||| |||| ||||| || ||||||| ||| || ||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
4617358 |
agggtggttcaacactttgtcttgtggacaccaacttgctattaggcctctatctgcaatttcatttgtaaactcagatga |
4617438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 2 - 294
Target Start/End: Original strand, 4457721 - 4458013
Alignment:
| Q |
2 |
tctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgc |
101 |
Q |
| |
|
||||||||||||||||||||||| | |||||| |||||||||||||||||||| || || |||||||||||||| || ||||||||||| ||| |||| | |
|
|
| T |
4457721 |
tctcccaccatcaattcattgactaacttctccacctcatctctcttcacatttgtatcgatttccatcccaatctctcattcattgcaaataaatctac |
4457820 |
T |
|
| Q |
102 |
agtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatcc |
201 |
Q |
| |
|
| ||| ||||| ||| | || |||||||||| || |||||| |||||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
4457821 |
aacttgttggcttatcaccaaagaatggccaacgcagcattggcactccagcgcatatgctttcagtggttgagtttcatccacaatgagtcaagaatcc |
4457920 |
T |
|
| Q |
202 |
accaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
|| ||||||||||||||||| |||| ||||| || ||||||| ||| || | ||||||||| ||| |||||||| ||| || |||||||| |
|
|
| T |
4457921 |
tccgattgaagggtggttcaacactttatcttgtggacaccaacttgctattaagcctctatcagaagtttcattcacaaaatccgatgacaa |
4458013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 2 - 294
Target Start/End: Original strand, 4516448 - 4516740
Alignment:
| Q |
2 |
tctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgc |
101 |
Q |
| |
|
||||||||||| |||||||||| ||||||||| ||||| ||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||| |
|
|
| T |
4516448 |
tctcccaccattaattcattgatcagcttctccacctcctctctcttcacattggtatcaatttctgctccaatctcccattcattgcaaatatatctgc |
4516547 |
T |
|
| Q |
102 |
agtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatcc |
201 |
Q |
| |
|
| |||| |||||| || || ||||| ||||||||||||||||| ||||| ||||| || ||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
4516548 |
aatttgttggctgctcagcaaaaaaaggccaacacaacattggtactccggcacagatgctttccattgtggagttccatccacaatgagtcaagaatcc |
4516647 |
T |
|
| Q |
202 |
accaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
|||| |||||| |||||||| |||| ||||||||| ||||| | ||| || | ||||||||| ||| |||||||| ||| || |||||||| |
|
|
| T |
4516648 |
tccaactgaaggatggttcaacactttctcttgcggacaccagcttgctattacgcctctatccgaagtttcattcacaaaatcggatgacaa |
4516740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 4256609 - 4256373
Alignment:
| Q |
10 |
catcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgct |
109 |
Q |
| |
|
|||||||||||||| ||| ||||| |||||||||||||||||||| || | ||||| || ||||| |||||||| | || ||| |||| ||||||| | |
|
|
| T |
4256609 |
catcaattcattgatcagattctccacctcatctctcttcacattagtattgatttcaattccaatctcccattcgctacaaataaatctacagtttgtt |
4256510 |
T |
|
| Q |
110 |
gg-ctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaatt |
208 |
Q |
| |
|
|| |||||| || ||||||||||||||||||||||||||||| ||||| || |||||| ||||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
4256509 |
ggtctgatcagcaaaaaatggccaacacaacattggaactccggcacaaatgctttcaatggttgagttccatcctcaatgagtcaagaatccaccaact |
4256410 |
T |
|
| Q |
209 |
gaagggtggttcaatacttgctcttgcgggcaccaac |
245 |
Q |
| |
|
|||| |||||||| ||||||||||||||| ||||||| |
|
|
| T |
4256409 |
gaagagtggttcagtacttgctcttgcggacaccaac |
4256373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 4505983 - 4506258
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
|||||| ||||| | ||||| ||||||||||||||| | ||||| |||||||| || |||||||| || ||||| ||| |||||||||| ||| |||| |
|
|
| T |
4505983 |
ctctccaaccataatttcatcgaccagcttctctacattttctctattcacattagtatcaatttcgattccaatctccaattcattgcaaataaatcta |
4506082 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
||||||| ||| ||||| | || || |||||||||| |||||| |||||||| ||||| ||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
4506083 |
cagtttgttggttgatcaccaaagaacggccaacacagcattggcactccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatc |
4506182 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcatt |
276 |
Q |
| |
|
|||||||||||||||| || || |||| |||||| | ||||| | ||| || |||| |||||||||||||||||| |
|
|
| T |
4506183 |
caccaattgaagggtgatttaacactttctcttgtgaacaccagcttgctataaggcttctatctgaaatttcatt |
4506258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 4504403 - 4504110
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
||||||||||||||||||||| | || ||||||||||| ||||||| ||||||| ||||| | ||||||||| |||||||| | ||| ||| || |
|
|
| T |
4504403 |
ctctcccaccatcaattcattaataagtttctctacctcttctctctgtacattggcatcaatcttcatcccaatctcccattcttcgcaaataatgttg |
4504304 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
| || ||||||||| | ||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4504303 |
ctattaagtggctgatcagaaaaaaatggccaacacaacattggcactccagcacaaacactttcagtggttgagttccatccacaatgagtcaagaatc |
4504204 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
| || ||||||||||||||||| |||| ||||| || ||||||| ||| | || ||||||| ||| |||||||| ||| ||||||||||| |
|
|
| T |
4504203 |
ctccgattgaagggtggttcaacactttatcttgtggacaccaacttgctacaagtcctctattagaagtttcattcacaaaatcagatgacaa |
4504110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 4568185 - 4568475
Alignment:
| Q |
4 |
tcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcag |
103 |
Q |
| |
|
||||||||| |||||||| | ||||||||| ||||| |||||||||||||| || |||||||| || || || ||| | | ||| || |||||||||||| |
|
|
| T |
4568185 |
tcccaccattaattcattcatcagcttctccacctcctctctcttcacatttgtatcaatttcgattccgatctccaacttattacaaatatatctgcag |
4568284 |
T |
|
| Q |
104 |
tttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccac |
203 |
Q |
| |
|
| || |||||| || | ||||| |||||||| |||||||| |||| ||||| || ||||| || |||||||||||||||||||||||||||| | |
|
|
| T |
4568285 |
tatgttggctgctcagaaaaaaaaggccaacataacattggtactctggcacaaatgctttccaatgtggagttccatccacaatgagtcaagaatcgtc |
4568384 |
T |
|
| Q |
204 |
caattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
||| ||||||||||||||| |||||||||||||| ||||| | ||| || |||||||||| ||| || ||||| |||||| |||||||| |
|
|
| T |
4568385 |
caactgaagggtggttcaacacttgctcttgcggacaccagcttgctatttggcctctatccgaagttccattcacaaactcggatgacaa |
4568475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 4299673 - 4299534
Alignment:
| Q |
155 |
catatactttcagcggttgagttccatccacaatgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatga |
254 |
Q |
| |
|
||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| || ||| | | |||| | | |
|
|
| T |
4299673 |
catatgctttcaatggttgagttccatccacagtgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacactagcttgcggtta |
4299574 |
T |
|
| Q |
255 |
ggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
4299573 |
ggcctctatttgaaatttcattctcaaactcagatgacaa |
4299534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 266
Target Start/End: Original strand, 4493151 - 4493346
Alignment:
| Q |
71 |
ccaatttcccattcattgcatatatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcgg |
170 |
Q |
| |
|
||||| ||| |||||||||| || |||| ||||||| ||||||||| || || ||||||||||||||||| ||||| |||||||| ||| | | |
|
|
| T |
4493151 |
ccaatctccaattcattgcaaatcaatctacagtttgttggctgatcactaaagaaaggccaacacaacattggcactccggcacatatgtttttggtag |
4493250 |
T |
|
| Q |
171 |
ttgagttccatccacaatgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctg |
266 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||| ||||||||| | || |||||| || ||||||| || || ||||||||||||| |
|
|
| T |
4493251 |
ttgagttccatccacaatgagtcaagaatccaccaatcgaatggtggttcagcagtttctcttgtggacaccaactagcaattaggcctctatctg |
4493346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 138 - 278
Target Start/End: Complemental strand, 4391996 - 4391852
Alignment:
| Q |
138 |
acattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgg |
237 |
Q |
| |
|
|||||||||||| || ||| || |||||| || |||||| ||||||||||| || |||||||||| |||| |||||||||||||||||||||||| ||| |
|
|
| T |
4391996 |
acattggaactctagaacaaatgctttcaatgggtgagtttcatccacaatgcgttaagaatccacaaattcaagggtggttcaatacttgctctttcgg |
4391897 |
T |
|
| Q |
238 |
gcaccaacctgcga----tgaggcctctatctgaaatttcattct |
278 |
Q |
| |
|
||||| | ||||| || |||||||||||||||||||||| |
|
|
| T |
4391896 |
acaccatcttgcgactagatagacctctatctgaaatttcattct |
4391852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4299752 - 4299671
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccat |
82 |
Q |
| |
|
||||||||||||||||||||||| |||||| || ||||| |||||| ||||||| || || ||||| || ||||| |||||| |
|
|
| T |
4299752 |
ctctcccaccatcaattcattgatcagcttttccacctcctctctcctcacatttgtatcgatttcgattccaatctcccat |
4299671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 16686273 - 16685980
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |
|
|
| T |
16686273 |
ctctcccaccatcaattcattgaccaatttctccacctcatctctcttcacattggtgtcaatttccatgccaatctcccattcattgcaaatatatctg |
16686174 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
|| |||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
16686173 |
cattttgctggctgatcagcaaaaaatggccaacacaacattggaactccagcatatatactttcagtggttgagttccatccacaatgagttaagaatc |
16686074 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
|||| |||||||| ||||| ||||||||||||||||||||||| | ||||| |||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
16686073 |
caccgattgaaggatggtttaatacttgctcttgcgggcaccagctcgcgattaggcttctatctgagatttcattcttaaactcagatgacaa |
16685980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 20863849 - 20863559
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| ||||| |||||||| ||||||||||||||||| |||||||| ||||||| ||||| || |||||| |
|
|
| T |
20863849 |
ctctcccaccatcaattcatttaccagcatctccacctcctctctcttgacattggtgtcaatttcgatcccaatctcccatttgttgcaaatgtatctg |
20863750 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
||||||| |||||||| || ||||||||||| ||||||||||| |||||||||||||| || ||| |||||||||||||||||||||||| | |||| |
|
|
| T |
20863749 |
cagtttgtcggctgatcagcaaaaaatggccagcacaacattggcactccagcacatatgctctcaatggttgagttccatccacaatgagttagaaatc |
20863650 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatga |
291 |
Q |
| |
|
||||||||||||| |||||||| || | |||||| || ||||||| ||||| |||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
20863649 |
caccaattgaaggatggttcaacaccttctcttgtggacaccaactcgcgattaggcctctatctgaaatttcattcacaaacgcagatga |
20863559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 1674352 - 1674645
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||| | | |||||||||||||| || ||||||||||| ||||| | ||||||||| || ||| |||| |
|
|
| T |
1674352 |
ctctcccaccatcaattcattgataagcttctccaaaccctctctcttcacattcgtatcaatttccataccaatcttccattcattacaaataaatcta |
1674451 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
||||||| ||||||||| || ||||||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||| || || |||||||||| |
|
|
| T |
1674452 |
cagtttgttggctgatcagcaaaaaatggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcagtgtgtcaagaatc |
1674551 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
| || ||||||||||||||||| |||| |||||| || |||||| || || |||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
1674552 |
cgccgattgaagggtggttcaacactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttcataaactcagatgacaa |
1674645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 1969181 - 1969140
Alignment:
| Q |
169 |
ggttgagttccatccacaatgagtcaagaatccaccaattga |
210 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
1969181 |
ggttgaattccagccacaatgagtcaagaatccaccaattga |
1969140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 152; Significance: 2e-80; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 293
Target Start/End: Original strand, 3086547 - 3086838
Alignment:
| Q |
2 |
tctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgc |
101 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||||| |||||||||||||| || || ||||| || ||||| |||||| |||||| |||||||| | |
|
|
| T |
3086547 |
tctcccaccatcaattcattgatcagcttctcgacctcctctctcttcacattagtatcgatttcaattccaatctcccatatattgcagatatatctac |
3086646 |
T |
|
| Q |
102 |
agtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatcc |
201 |
Q |
| |
|
||||| ||| ||||| | |||||||||||||||||||||| ||||||||| || |||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
3086647 |
agtttattggttgatctccataaaatggccaacacaacattggcactccagcaagtacgctttcaaccgttgagttccatccacaatgagtcaagaatcc |
3086746 |
T |
|
| Q |
202 |
accaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgaca |
293 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||| | |||||| || ||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
3086747 |
accaattgaagggtgattcaatacttgctcttgcggacaccagcttgcgattagacctctatctgaaatttctttctcaaactcagatgaca |
3086838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 41511484 - 41511442
Alignment:
| Q |
170 |
gttgagttccatccacaatgagtcaagaatccaccaattgaag |
212 |
Q |
| |
|
||||| ||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
41511484 |
gttgaattccaaccacaatgagtcaaaaatccaccaattgaag |
41511442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 48532826 - 48532780
Alignment:
| Q |
170 |
gttgagttccatccacaatgagtcaagaatccaccaattgaagggtg |
216 |
Q |
| |
|
||||| |||||||||||||| || |||||||| |||||||||||||| |
|
|
| T |
48532826 |
gttgaattccatccacaatgtgttaagaatcctccaattgaagggtg |
48532780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 11 - 294
Target Start/End: Original strand, 1281250 - 1281533
Alignment:
| Q |
11 |
atcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgctg |
110 |
Q |
| |
|
||||||||||||| || ||| | ||||| |||||||||||||| || || |||||||| ||||| | ||||||||| || ||| |||| |||| || || |
|
|
| T |
1281250 |
atcaattcattgatcaacttagccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttg |
1281349 |
T |
|
| Q |
111 |
gctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaattga |
210 |
Q |
| |
|
||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
1281350 |
gctgatcagcaaaaaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattga |
1281449 |
T |
|
| Q |
211 |
agggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
|||||||||||| |||| |||||| || ||||||| ||| || |||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
1281450 |
agggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcgcaaagtcagatgacaa |
1281533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 3725 - 3432
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||| ||||||||||||||||||| | || ||||| | ||||| |||||||| ||||| ||| |||| |
|
|
| T |
3725 |
ctctcccaccgtcaattcattgactagcttctccacctcatctctcttcacatccatatcgatttcaagtccaatctcccattcgttgcaaataaatcta |
3626 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
||||||| ||||||||| | || ||||||||||| | |||||| |||||||| ||||| ||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
3625 |
cagtttgttggctgatcaccaaagaatggccaacaaagcattggtactccagcgcatatgctttcagtggttgaattccatccacaatgagtcaagaatc |
3526 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||| || ||||| | || ||| ||||||||||||||||||||||||| ||| || |||||||| |
|
|
| T |
3525 |
caccaattgaagggtggatcagtacttgctcttgtggacaccagcttgtgattaggcctctatctgaaatttcattctcaaattctgatgacaa |
3432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 10 - 294
Target Start/End: Complemental strand, 4683 - 4399
Alignment:
| Q |
10 |
catcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgct |
109 |
Q |
| |
|
|||||||||||||| || ||| ||||| |||||||||||||| || ||||||||||| ||| | |||||| || | | ||||| | |||||| | |
|
|
| T |
4683 |
catcaattcattgatcatattcgttaccttctctctcttcacattagtatcaatttccataccagtctcccatatatgggagatataccgatagtttgtt |
4584 |
T |
|
| Q |
110 |
ggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaattg |
209 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4583 |
ggctgatcggcgaaaaatggccaacacaacattggcactcctacacatatgctttcaatggttgagttccatccgcaatgagtcaagaatccaccaattg |
4484 |
T |
|
| Q |
210 |
aagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
|||||||||||| |||||||||||| || ||||| | || || ||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4483 |
aagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcagatgacaa |
4399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 126; Significance: 5e-65; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 24103125 - 24103418
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| || ||||||||||||||||| || || ||||| | ||||| |||||||||| ||| ||| |||| |
|
|
| T |
24103125 |
ctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtatcgatttcgagtccaatctcccattcatagcaaataaatcta |
24103224 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
||||||| ||| ||||| | || |||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
24103225 |
cagtttgttggttgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatc |
24103324 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
||||||| ||||||||||| || |||| ||||| || ||||||| ||| || || ||||||||||||| ||| || ||| ||||||||||| |
|
|
| T |
24103325 |
caccaatcgaagggtggtttaacactttatcttgtggacaccaacttgctattagtcctctatctgaaacttctttaaaaaaatcagatgacaa |
24103418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 28000105 - 27999812
Alignment:
| Q |
1 |
ctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctg |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||| | || ||| |||||||||| | ||||||||||| ||||| | ||||||||| || ||| |||| |
|
|
| T |
28000105 |
ctctcccaccatcaattcattgataagcttctccaaatcctctatcttcacattcatatcaatttccataccaatcttccattcattacaaataaatcta |
28000006 |
T |
|
| Q |
101 |
cagtttgctggctgatccgcgaaaaatggccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatc |
200 |
Q |
| |
|
||||||| ||||||||| || ||||||| ||||||||||||||| |||||||| ||||| ||||| | ||||||||||||||| || ||||||||||| | |
|
|
| T |
28000005 |
cagtttgttggctgatcagcaaaaaatgaccaacacaacattggcactccagcgcatatgctttcggtggttgagttccatccgcagtgagtcaagaacc |
27999906 |
T |
|
| Q |
201 |
caccaattgaagggtggttcaatacttgctcttgcgggcaccaacctgcgatgaggcctctatctgaaatttcattcttaaactcagatgacaa |
294 |
Q |
| |
|
| | ||||||||||||||||| |||| |||||| || |||||| || || |||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
27999905 |
cgctgattgaagggtggttcaaaactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttcctaaactcagatgacaa |
27999812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 20155290 - 20155247
Alignment:
| Q |
170 |
gttgagttccatccacaatgagtcaagaatccaccaattgaagg |
213 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
20155290 |
gttgaattccatccacaatgtgtcaagaatcctccaattgaagg |
20155247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 264
Target Start/End: Complemental strand, 3662 - 3428
Alignment:
| Q |
29 |
ttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgctggctgatccgcgaaaaatg |
128 |
Q |
| |
|
||||| ||||| |||||||||||||||| || ||||| | ||||| ||||||||||| || || |||| ||||||| || || || | |||||||| |
|
|
| T |
3662 |
ttctccacctcctctctcttcacattggaatctatttcacttccaatctcccattcattccaaatgcatctacagtttgttgagtgttcggggaaaaatg |
3563 |
T |
|
| Q |
129 |
gccaacacaacattggaactccagcacatatactttcagcggttgagttccatccacaatgagtcaagaatccaccaattgaagggtggttcaatacttg |
228 |
Q |
| |
|
|||||| || |||||||||||||| ||| || |||||| |||||||||||||||||||||||| ||||||||||||| | ||||||||||||| ||||| |
|
|
| T |
3562 |
gccaacgcagcattggaactccagaacaaatgctttcaatggttgagttccatccacaatgagttaagaatccaccaact-aagggtggttcaacacttg |
3464 |
T |
|
| Q |
229 |
ctcttgcgggcaccaacctgcgatgaggcctctatc |
264 |
Q |
| |
|
||||| ||| ||||| | ||||| |||||| |||| |
|
|
| T |
3463 |
ctcttacggacaccatcttgcgactaggcctatatc |
3428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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