View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18323_low_21 (Length: 334)
Name: NF18323_low_21
Description: NF18323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18323_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 20 - 319
Target Start/End: Complemental strand, 35075915 - 35075616
Alignment:
| Q |
20 |
agggttagagatgaaggtgctacataattagtacacgcattaatctttcttcattatcctaattagtcgccaaaattgcaaatcacaagctgatgctgac |
119 |
Q |
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| T |
35075915 |
agggttagagatgaaggtgctacataattagtacacgcattaatctttcttcattatcctaattagtcgccaaaattgcaaatcacaagctgatgctgcc |
35075816 |
T |
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| Q |
120 |
tttcgaacataatcaattaattaatcaacactactattttatattagaatatatacacacattttagcctaaaagcaacctaacatatactttgtcatct |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35075815 |
tttcgaacataatcaattaattaatcaacactactattttatattagattatatacacacattttagcctaaaagcaacctaacatatactttgtcatct |
35075716 |
T |
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| Q |
220 |
taatttatagtagaaacaatccaccaacacattaattcaaaattcaaatacaaacaaaacctaccagaaacttgtataaacaaatcatcatacataatag |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35075715 |
taatttatagtagaaacaatccaccaacacattaattcaaaattcaaatacaaacaaaacctaccagaaacttgtataaacaaatcatcatacataatag |
35075616 |
T |
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