View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18323_low_28 (Length: 282)

Name: NF18323_low_28
Description: NF18323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18323_low_28
NF18323_low_28
[»] chr3 (37 HSPs)
chr3 (1-224)||(43207315-43207542)
chr3 (1-222)||(53506962-53507183)
chr3 (1-223)||(9878765-9878986)
chr3 (1-223)||(44708281-44708505)
chr3 (1-222)||(50939311-50939534)
chr3 (1-222)||(34290714-34290940)
chr3 (1-205)||(54407236-54407439)
chr3 (1-222)||(48156942-48157167)
chr3 (1-172)||(37168223-37168395)
chr3 (1-98)||(8073416-8073512)
chr3 (223-275)||(26403627-26403679)
chr3 (7-98)||(3953980-3954071)
chr3 (1-75)||(54619281-54619355)
chr3 (1-75)||(38681171-38681245)
chr3 (157-223)||(48720530-48720596)
chr3 (1-75)||(29620466-29620540)
chr3 (1-74)||(18372434-18372507)
chr3 (26-73)||(8420258-8420305)
chr3 (1-75)||(27078647-27078721)
chr3 (1-75)||(27084444-27084518)
chr3 (27-73)||(29598040-29598086)
chr3 (1-42)||(21582758-21582799)
chr3 (1-42)||(47467671-47467712)
chr3 (28-73)||(49393023-49393068)
chr3 (1-42)||(53149392-53149433)
chr3 (7-75)||(36716109-36716177)
chr3 (26-73)||(52374590-52374637)
chr3 (156-213)||(47467591-47467648)
chr3 (156-207)||(50258733-50258784)
chr3 (158-208)||(36605861-36605911)
chr3 (158-207)||(27078819-27078868)
chr3 (158-207)||(27084616-27084665)
chr3 (158-207)||(36716276-36716325)
chr3 (158-207)||(38681348-38681397)
chr3 (1-42)||(42098788-42098829)
chr3 (158-207)||(54619454-54619503)
chr3 (171-207)||(3954866-3954902)
[»] chr8 (28 HSPs)
chr8 (1-207)||(23798339-23798545)
chr8 (1-224)||(42600582-42600807)
chr8 (1-207)||(23606707-23606905)
chr8 (1-207)||(10917210-10917416)
chr8 (1-98)||(45475745-45475842)
chr8 (1-98)||(13534764-13534861)
chr8 (1-98)||(13624304-13624401)
chr8 (1-98)||(41879109-41879206)
chr8 (1-75)||(2952299-2952373)
chr8 (1-75)||(30883280-30883354)
chr8 (1-75)||(3048595-3048669)
chr8 (1-75)||(5860822-5860896)
chr8 (28-73)||(25561635-25561680)
chr8 (27-71)||(8102845-8102889)
chr8 (26-73)||(15167540-15167587)
chr8 (26-73)||(41677300-41677347)
chr8 (28-73)||(8646129-8646174)
chr8 (29-73)||(30674507-30674551)
chr8 (26-73)||(7944649-7944696)
chr8 (156-207)||(20003875-20003926)
chr8 (132-207)||(45472207-45472281)
chr8 (27-73)||(11290113-11290159)
chr8 (158-207)||(2952473-2952522)
chr8 (158-207)||(3048774-3048823)
chr8 (158-207)||(5860996-5861045)
chr8 (28-73)||(15078689-15078734)
chr8 (1-42)||(37430236-37430277)
chr8 (158-206)||(30883127-30883175)
[»] chr7 (26 HSPs)
chr7 (1-222)||(47985047-47985268)
chr7 (1-207)||(24525762-24525968)
chr7 (1-223)||(38414953-38415175)
chr7 (9-223)||(19691896-19692111)
chr7 (1-222)||(20091358-20091579)
chr7 (1-223)||(10329487-10329710)
chr7 (4-207)||(48983924-48984127)
chr7 (1-207)||(23551148-23551355)
chr7 (1-88)||(25010371-25010458)
chr7 (1-172)||(8239539-8239712)
chr7 (119-221)||(25010254-25010356)
chr7 (1-91)||(8171616-8171706)
chr7 (1-75)||(18776843-18776917)
chr7 (1-62)||(29077184-29077245)
chr7 (27-73)||(17800348-17800394)
chr7 (1-42)||(10955468-10955509)
chr7 (26-73)||(23859002-23859049)
chr7 (27-73)||(7398380-7398426)
chr7 (1-42)||(12596364-12596405)
chr7 (157-207)||(28749597-28749647)
chr7 (28-73)||(26917810-26917855)
chr7 (28-73)||(27237551-27237596)
chr7 (174-225)||(10027615-10027667)
chr7 (28-73)||(12419623-12419670)
chr7 (171-207)||(12596443-12596479)
chr7 (158-213)||(18777019-18777075)
[»] chr2 (28 HSPs)
chr2 (1-222)||(26715931-26716152)
chr2 (1-222)||(27506818-27507041)
chr2 (1-207)||(9045848-9046053)
chr2 (1-222)||(10762643-10762865)
chr2 (20-202)||(8327488-8327671)
chr2 (1-224)||(24410234-24410461)
chr2 (1-98)||(29939940-29940037)
chr2 (1-75)||(3155167-3155241)
chr2 (1-75)||(4505844-4505918)
chr2 (1-75)||(12337526-12337600)
chr2 (1-64)||(6964968-6965031)
chr2 (1-75)||(8907157-8907231)
chr2 (28-73)||(12134169-12134214)
chr2 (26-73)||(24035672-24035719)
chr2 (26-73)||(29694312-29694359)
chr2 (158-207)||(4505695-4505744)
chr2 (156-207)||(3952915-3952966)
chr2 (26-73)||(37182598-37182645)
chr2 (26-73)||(38400726-38400773)
chr2 (158-207)||(3155019-3155068)
chr2 (1-42)||(3952989-3953030)
chr2 (176-213)||(5952949-5952986)
chr2 (158-207)||(6964808-6964857)
chr2 (1-42)||(7162767-7162808)
chr2 (28-73)||(11912887-11912932)
chr2 (175-226)||(52968-53020)
chr2 (33-73)||(10252335-10252375)
chr2 (28-72)||(13800674-13800718)
[»] chr6 (21 HSPs)
chr6 (1-224)||(20711798-20712020)
chr6 (1-207)||(27788766-27788972)
chr6 (1-224)||(17353757-17353982)
chr6 (1-224)||(235304-235527)
chr6 (1-223)||(28075587-28075811)
chr6 (6-207)||(19986982-19987184)
chr6 (1-183)||(34397703-34397885)
chr6 (1-98)||(19737770-19737867)
chr6 (1-75)||(21280499-21280573)
chr6 (1-75)||(13727477-13727551)
chr6 (1-75)||(21479448-21479522)
chr6 (1-75)||(33774071-33774145)
chr6 (1-42)||(24711077-24711118)
chr6 (156-210)||(30832666-30832720)
chr6 (1-42)||(30832602-30832643)
chr6 (157-207)||(23070889-23070939)
chr6 (158-207)||(11081684-11081733)
chr6 (158-207)||(13727650-13727699)
chr6 (146-207)||(19741212-19741273)
chr6 (171-207)||(21280349-21280385)
chr6 (171-207)||(27314778-27314814)
[»] chr1 (33 HSPs)
chr1 (1-223)||(9173100-9173322)
chr1 (1-207)||(1366955-1367161)
chr1 (1-210)||(19955544-19955753)
chr1 (1-222)||(40501867-40502090)
chr1 (1-222)||(13913559-13913782)
chr1 (1-222)||(17168769-17168992)
chr1 (1-223)||(44895466-44895688)
chr1 (1-207)||(27559463-27559673)
chr1 (1-225)||(51607517-51607742)
chr1 (1-98)||(23185366-23185463)
chr1 (1-98)||(4971695-4971792)
chr1 (1-74)||(9181082-9181155)
chr1 (1-91)||(5316626-5316716)
chr1 (1-75)||(27906794-27906868)
chr1 (1-75)||(44655703-44655777)
chr1 (1-98)||(50881369-50881466)
chr1 (1-42)||(3406413-3406454)
chr1 (1-42)||(3440366-3440407)
chr1 (1-58)||(5027528-5027585)
chr1 (1-42)||(14146295-14146336)
chr1 (1-42)||(41697214-41697255)
chr1 (132-207)||(23181727-23181801)
chr1 (26-73)||(39134849-39134896)
chr1 (22-73)||(5533251-5533302)
chr1 (156-207)||(14146221-14146272)
chr1 (174-207)||(5027991-5028024)
chr1 (1-42)||(6771786-6771827)
chr1 (1-42)||(16140050-16140091)
chr1 (28-73)||(26803889-26803934)
chr1 (158-207)||(27906949-27906998)
chr1 (26-71)||(38547162-38547207)
chr1 (158-207)||(44655555-44655604)
chr1 (171-207)||(41697293-41697329)
[»] chr5 (30 HSPs)
chr5 (1-207)||(16198869-16199076)
chr5 (1-223)||(38869438-38869660)
chr5 (1-222)||(27923885-27924107)
chr5 (1-222)||(7670728-7670949)
chr5 (1-204)||(9364113-9364316)
chr5 (1-222)||(40389611-40389831)
chr5 (1-207)||(16799402-16799606)
chr5 (1-166)||(28822417-28822583)
chr5 (1-95)||(16592149-16592243)
chr5 (1-75)||(34756441-34756515)
chr5 (1-98)||(27078939-27079036)
chr5 (1-98)||(30854258-30854354)
chr5 (1-42)||(2274874-2274915)
chr5 (1-42)||(15480164-15480205)
chr5 (28-73)||(15639575-15639620)
chr5 (1-42)||(19523183-19523224)
chr5 (28-73)||(34425832-34425877)
chr5 (156-207)||(15480228-15480279)
chr5 (156-207)||(19523109-19523160)
chr5 (27-66)||(22648860-22648899)
chr5 (31-73)||(11242447-11242489)
chr5 (28-73)||(2024766-2024811)
chr5 (158-207)||(34756615-34756664)
chr5 (1-42)||(36187954-36187995)
chr5 (29-73)||(7079561-7079605)
chr5 (171-207)||(22987481-22987517)
chr5 (139-207)||(30853282-30853350)
chr5 (171-207)||(31881604-31881640)
chr5 (158-222)||(34855925-34855989)
chr5 (29-73)||(40794452-40794496)
[»] chr4 (49 HSPs)
chr4 (1-207)||(24969258-24969467)
chr4 (1-219)||(40089328-40089546)
chr4 (1-207)||(32128408-32128614)
chr4 (1-207)||(16844843-16845051)
chr4 (1-222)||(19498313-19498534)
chr4 (1-226)||(2790818-2791044)
chr4 (1-205)||(16882472-16882675)
chr4 (1-204)||(34027407-34027609)
chr4 (1-222)||(38352332-38352554)
chr4 (1-219)||(54083319-54083541)
chr4 (1-207)||(37777300-37777509)
chr4 (1-141)||(43455608-43455746)
chr4 (4-98)||(35465040-35465134)
chr4 (1-98)||(47128920-47129017)
chr4 (1-98)||(10978833-10978930)
chr4 (1-98)||(23509875-23509972)
chr4 (1-98)||(10428282-10428379)
chr4 (1-98)||(13460140-13460237)
chr4 (1-98)||(35779402-35779499)
chr4 (1-91)||(34768651-34768741)
chr4 (1-75)||(38209668-38209742)
chr4 (1-75)||(55255225-55255299)
chr4 (1-98)||(48209173-48209270)
chr4 (148-206)||(35463958-35464016)
chr4 (27-75)||(36118584-36118632)
chr4 (26-73)||(37746847-37746894)
chr4 (1-42)||(5128919-5128960)
chr4 (1-42)||(32915374-32915415)
chr4 (174-222)||(54779441-54779490)
chr4 (29-73)||(2135447-2135491)
chr4 (158-210)||(38209842-38209894)
chr4 (1-37)||(54780771-54780807)
chr4 (156-207)||(1105447-1105498)
chr4 (136-207)||(10431421-10431492)
chr4 (132-207)||(35780532-35780606)
chr4 (26-73)||(39329518-39329565)
chr4 (171-213)||(9579483-9579525)
chr4 (171-213)||(9585178-9585220)
chr4 (27-73)||(15735030-15735076)
chr4 (27-73)||(30507199-30507245)
chr4 (157-207)||(45560704-45560754)
chr4 (1-42)||(1105521-1105562)
chr4 (28-73)||(36178607-36178652)
chr4 (1-42)||(37514648-37514689)
chr4 (28-73)||(40217164-40217209)
chr4 (158-207)||(55255096-55255145)
chr4 (171-207)||(5128997-5129033)
chr4 (147-207)||(17679233-17679293)
chr4 (147-207)||(47127997-47128057)
[»] scaffold0039 (2 HSPs)
scaffold0039 (1-105)||(106459-106563)
scaffold0039 (148-222)||(106379-106454)
[»] scaffold0027 (1 HSPs)
scaffold0027 (119-224)||(4147-4252)
[»] scaffold0070 (2 HSPs)
scaffold0070 (1-98)||(1271-1368)
scaffold0070 (171-207)||(1027-1063)
[»] scaffold0007 (1 HSPs)
scaffold0007 (26-73)||(230986-231033)
[»] scaffold0022 (2 HSPs)
scaffold0022 (27-73)||(40012-40058)
scaffold0022 (27-73)||(138072-138118)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-42)||(181903-181944)
[»] scaffold0229 (1 HSPs)
scaffold0229 (1-107)||(23803-23908)
[»] scaffold1320 (1 HSPs)
scaffold1320 (28-73)||(1285-1330)


Alignment Details
Target: chr3 (Bit Score: 154; Significance: 1e-81; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 43207315 - 43207542
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43207315 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggc 43207414  T
Q  101 tgggggtatt---nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctg 197  Q
    ||||||||||           ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  43207415 tgggggtattaaaaaaaaaaattggagggcagtaatactagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctg 43207514  T
Q  198 tttgca-cccctcagggtcgggcctgat 224  Q
    |||||| |||||||||  ||||||||||    
T  43207515 tttgcaccccctcaggaccgggcctgat 43207542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 53506962 - 53507183
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||     
T  53506962 atgactaccgtatacatgagaaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacataaaatggt 53507061  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  53507062 tgggggtattaaaaaaaattggagggcagtagtactagtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgttt 53507160  T
Q  201 gca-cccctcagggtcgggcctg 222  Q
    ||| |||||||||| ||||||||    
T  53507161 gcaccccctcagggccgggcctg 53507183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 9878765 - 9878986
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||| ||||||||| |||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9878765 atgactatcgtatacataaggaacccccatctaacgccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggc 9878864  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||||||||||||||||||||||||||||  ||| ||||||||||||| | ||||||||||||||||||||||||||||    
T  9878865 tgggggtattaaaaaaaattggagggcagtaatactagtgggtattaaaa--aaaattgaggcccatgattaagggaggcccagctctgttgagctgttt 9878962  T
Q  201 gca-cccctcagggtcgggcctga 223  Q
    ||| |||||||||| ||| |||||    
T  9878963 gcaccccctcagggccggacctga 9878986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 44708505 - 44708281
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  44708505 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacataaaatggc 44708406  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    ||||||||||         |||||| |||||| ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  44708405 tgggggtattaaaaaaaaattggagagcagtagtactagtggatattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtt 44708306  T
Q  200 tgca-cccctcagggtcgggcctga 223  Q
    |||| |||||||| | |||||||||    
T  44708305 tgcaccccctcagagccgggcctga 44708281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 50939311 - 50939534
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  50939311 atgactaccgtatacatgaggaacccccgcctaacaccaaaagcaaaaggacctaattctaataggcctaaaagactaaaacaaggagacagaaaatggc 50939410  T
Q  101 tgggggtatt--nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgt 198  Q
    ||||| ||||          ||||||||||||| |||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  50939411 tggggttattaaaaaaaaaattggagggcagtagtactggtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgt 50939509  T
Q  199 ttgcacc-cctcagggtcgggcctg 222  Q
    ||||||| |||||||| ||||||||    
T  50939510 ttgcacctcctcagggacgggcctg 50939534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 34290714 - 34290940
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||     
T  34290714 atgactaccgtatatatgaggaacccccacctaacaccaaaaacaagaggacctaattctaataggcctaaaaggctaaaacaaggggacataaaatggt 34290813  T
Q  101 tgggggtatt---nnnnnnnnttggagggcagtaatactagtgggtatt-aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagct 196  Q
    ||||||||||           ||||||||||||| ||||||||| |||| ||||| ||| |||||||||||| |||||||||||||| ||||||||||||    
T  34290814 tgggggtattaaaaaaaaaaattggagggcagtagtactagtggatattaaaaaaaaaaattgaggcccatgcctgagggaggcccaactctgttgagct 34290913  T
Q  197 gtttgca-cccctcagggtcgggcctg 222  Q
    ||||||| |||||||||||||||||||    
T  34290914 gtttgcaccccctcagggtcgggcctg 34290940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 54407236 - 54407439
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||| ||    
T  54407236 atgactaccgtatacat-agtaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaagaaggggacagaaaatagc 54407334  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    ||||||||||         ||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  54407335 tgggggtattaaaaaaaaattggagggcagtagtactagtaggtattaaaaa-aaaattgaggcccatgactgagggaggcccaactctgttgagctgtt 54407433  T
Q  200 tgcacc 205  Q
    ||||||    
T  54407434 tgcacc 54407439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 48157167 - 48156942
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||| ||||||||||||||| ||||| ||||| |||||||||||| || |||||||| ||||| ||||||  ||||||||||||||||||||||||    
T  48157167 atgactactgtatacatgaggaacccccacttaacatcaaaagcaagaggacgtaattctagtaggcttaaaaggctaaaacaaggggacagaaaatggc 48157068  T
Q  101 tgggggtatt--nnnnnnnnttggagggcagtaatactagtgggtatt-aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctg 197  Q
    ||||||||||          |||||||||| ||||||||||||||||| ||||| ||| || |||||||||| |||||||||||||||||||||||||||    
T  48157067 tgggggtattaaaaaaaaaattggagggcattaatactagtgggtattaaaaaataaaatttaggcccatgattgagggaggcccagctctgttgagctg 48156968  T
Q  198 tttgca-cccctcagggtcgggcctg 222  Q
    |||||| |||||||||| ||||||||    
T  48156967 tttgcaccccctcagggccgggcctg 48156942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 37168395 - 37168223
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||  ||||||||||||||| ||||| ||    
T  37168395 atgactaccgtatacatgaggaactcccacctaacactaaaagcaagaggacctaattataataggcctaaaaggctaaaacaaggggacataaaatagc 37168296  T
Q  101 tgggggtatt--nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactg 172  Q
    ||||||||||          ||||||||||||| ||||||||||||||||||| ||| || |||||||||||||    
T  37168295 tgggggtattaaaaaaaaaattggagggcagtagtactagtgggtattaaaaa-aaaattaaggcccatgactg 37168223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 8073416 - 8073512
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| || | ||||||||||||||||||||||  ||||||||| ||||| ||||||    
T  8073416 atgactaccgtatacatgaggaac-cccacataacaccaaaagcaataggaactaattctaataggcctaaaaggctaaaacaagaggacataaaatg 8073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 26403679 - 26403627
Alignment:
Q  223 atcaggtacatagttgataaagctaataacttgaaacccgaacgactagataa 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26403679 atcaggtacatagttgataaagctaataacttgaaacccgaacgactagataa 26403627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 3953980 - 3954071
Alignment:
Q  7 accgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  ||||||||  ||||||||| | ||||||||||    
T  3953980 accgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagagaacagaaaatg 3954071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 54619281 - 54619355
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  54619281 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 54619355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 38681171 - 38681245
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  38681171 atgactaccgtatacatgaggaaaccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 38681245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 48720530 - 48720596
Alignment:
Q  157 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcagggtcgggcctga 223  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| |||||| || ||||||    
T  48720530 ttgaggcccatgactgagggaagctcagctctgttgagctgtttgcacccgtcagggccgtgcctga 48720596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29620466 - 29620540
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||| | |||||| |||||  |||||||||    
T  29620466 atgactaccgtatacatgaggaacccccacctaacaccacaatcaagaggaactaattttaataatcctaaaaga 29620540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18372507 - 18372434
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaag 74  Q
    |||||||||||||||||||||||  |||| |||||||||||| |||||| | ||||||||||||  ||||||||    
T  18372507 atgactaccgtatacatgaggaatccccatctaacaccaaaatcaagaggaactaattctaataatcctaaaag 18372434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 8420305 - 8420258
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  8420305 cccacctaacaccaaaagcaagagaacccaattctaatatgcctaaaa 8420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27078647 - 27078721
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||| ||| || |||||||||||||| |||||  | ||||||||||||  |||||||||    
T  27078647 atgactaccgtatacatgagaaacccctacctaacaccaaaatcaagatgaactaattctaataatcctaaaaga 27078721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27084444 - 27084518
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||| ||| || |||||||||||||| |||||  | ||||||||||||  |||||||||    
T  27084444 atgactaccgtatacatgagaaacccctacctaacaccaaaatcaagatgaactaattctaataatcctaaaaga 27084518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 29598086 - 29598040
Alignment:
Q  27 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  29598086 ccacctaacaccaaaagcaagatgacctaattctaataggcctaaaa 29598040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21582799 - 21582758
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  21582799 atgactaccgtatacatgaggaacccccacctaacaccaaaa 21582758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 47467712 - 47467671
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  47467712 atgactaccgtatacatgaggaacccccacctaacaccaaaa 47467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 49393068 - 49393023
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||    
T  49393068 cacctaacaccaaaagtaagaggacctaattctaataggcctaaaa 49393023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 53149392 - 53149433
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  53149392 atgactaccgtatacatgaggaacccccacctaacaccaaaa 53149433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 36716109 - 36716177
Alignment:
Q  7 accgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    ||||||||| ||||| || ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  36716109 accgtatacgtgagggacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 36716177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 52374637 - 52374590
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||    
T  52374637 cccacctaacaccaaaagcaagaggactcaattctaataggcctaaaa 52374590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 47467648 - 47467591
Alignment:
Q  156 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcaggg 213  Q
    ||||||||||||   |||||||||| ||||||  ||||||||||||||||||||||||    
T  47467648 cttgaggcccatccttgagggaggctcagctcgtttgagctgtttgcacccctcaggg 47467591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 50258733 - 50258784
Alignment:
Q  156 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  50258733 cttgaggcccatccttgagggaggcccagctcatttgagctgtttgcacccc 50258784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 36605911 - 36605861
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccct 208  Q
    ||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  36605911 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccct 36605861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 27078819 - 27078868
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  27078819 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 27078868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 27084616 - 27084665
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  27084616 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 27084665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 36716276 - 36716325
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  36716276 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 36716325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 38681348 - 38681397
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  38681348 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 38681397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42098829 - 42098788
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||||||| || || |||||||||||    
T  42098829 atgactaccgtatacatgaggaacccctacttaacaccaaaa 42098788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 54619454 - 54619503
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  54619454 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 54619503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 3954866 - 3954902
Alignment:
Q  171 tgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||||||||||  ||||||||||||||||||    
T  3954866 tgagggaggcccagctcgtttgagctgtttgcacccc 3954902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 6e-80; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 23798339 - 23798545
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||     
T  23798339 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggt 23798438  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||     
T  23798439 tgggggtattaaaaacaattggagggcagtaatactagtgggtattaaaaaaaaatttgaggcccatgactgagggaggcccagctttgttgagctgttc 23798538  T
Q  201 gcacccc 207  Q
    |||||||    
T  23798539 gcacccc 23798545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 42600807 - 42600582
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  42600807 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaagacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggc 42600708  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    ||||| ||||         ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  42600707 tggggttattaaattttttttggagggcagtagtactagtgggtattaaaaataaaattgaggcccatgactgagggaggcccagctctgttgagctgtt 42600608  T
Q  200 tgca-cccctcagggtcgggcctgat 224  Q
    |||| |||||||||| ||||||||||    
T  42600607 tgcaccccctcagggacgggcctgat 42600582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 23606707 - 23606905
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||        |    
T  23606707 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggaca--------c 23606798  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||||||||| ||||||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  23606799 tgggggtattaaaaaaaattggagggcagtattactagtgggtattaaaagaaaatttgaggcccatgactgagggaggcccaactctgttgagctgttt 23606898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 10917416 - 10917210
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  10917416 atgactaccttatacatgaggaacccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggc 10917317  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    ||||||||||         ||| || |||||| ||||||||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  10917316 tgggggtattaaattttttttgaagagcagtagtactagtgggtattaaaaa-aaaattgtggcccatgagtgagggaggcccagctctgttgagctgtt 10917218  T
Q  200 tgcacccc 207  Q
    ||||||||    
T  10917217 tgcacccc 10917210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45475842 - 45475745
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  45475842 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggaactaattctaataggcctaaaaggctaaaacaagaggacagaaaatg 45475745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 13534764 - 13534861
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||  ||||||||  ||||||||| ||||||||||||    
T  13534764 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagagaaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 13534861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 13624304 - 13624401
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||  ||||||||  ||||||||| ||||||||||||    
T  13624304 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagagaaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 13624401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 41879206 - 41879109
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||| ||||||||| ||| ||||||||||||||||| |||||| | ||||||||||||  ||||||||  ||||||||| ||||||||||||    
T  41879206 atgactaccgaatacatgagaaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 41879109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2952299 - 2952373
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  2952299 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 2952373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30883354 - 30883280
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  30883354 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 30883280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 3048595 - 3048669
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||| ||||||| | ||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  3048595 atgactaccgtatacacgaggaaccctcacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 3048669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5860822 - 5860896
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    ||||||||| |||||||||| ||| || |||||||||||||| |||||| | ||||||||||||  |||||||||    
T  5860822 atgactaccatatacatgagaaaccccaacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 5860896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 25561635 - 25561680
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  25561635 cacctaacaccaaaagcaagaggacccaattctaataggcctaaaa 25561680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 8102889 - 8102845
Alignment:
Q  27 ccacctaacaccaaaagcaagagaacctaattctaataggcctaa 71  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  8102889 ccacctaacaccaaaagcaagaggacccaattctaataggcctaa 8102845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 15167540 - 15167587
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||| ||||| ||| |||||||||||||||||||    
T  15167540 cccacctaacaccaaaagtaagaggacccaattctaataggcctaaaa 15167587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 41677300 - 41677347
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||    
T  41677300 cccacctaacaccaaaagcaagaggacccgattctaataggcctaaaa 41677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 8646174 - 8646129
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||    
T  8646174 cacctaacaccaaaagcaagatgacctaattcgaataggcctaaaa 8646129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 30674507 - 30674551
Alignment:
Q  29 acctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||||    
T  30674507 acctaacaccaaaagcaagagaacccaattcaaatagacctaaaa 30674551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 7944649 - 7944696
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||||| ||  |||| ||||||||||||||    
T  7944649 cccacctaacaccaaaagcaagaggacacaattttaataggcctaaaa 7944696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 20003875 - 20003926
Alignment:
Q  156 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  20003875 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 20003926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 45472281 - 45472207
Alignment:
Q  132 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||| ||||||| ||||| ||| |||||||||||   || ||| |||||||||| |||||||||||||||||||    
T  45472281 atactaatgggtataaaaaaaaaa-ttgaggcccatccttgggggtggcccagctcggttgagctgtttgcacccc 45472207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 11290159 - 11290113
Alignment:
Q  27 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||| ||||||||||| || ||| |||||||||||||||||||    
T  11290159 ccacctaataccaaaagcaacaggacccaattctaataggcctaaaa 11290113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 2952473 - 2952522
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  2952473 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 2952522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 3048774 - 3048823
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  3048774 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 3048823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 5860996 - 5861045
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  5860996 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 5861045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 15078734 - 15078689
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||| ||||| ||| |||||||| ||||||||||    
T  15078734 cacctaacaccaaaagtaagaggacccaattctaacaggcctaaaa 15078689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37430236 - 37430277
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||||||| | ||| |||||||||||    
T  37430236 atgactaccgtatacatgaggaaccctcacgtaacaccaaaa 37430277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 30883175 - 30883127
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc 206  Q
    ||||||||||   |||||||||||||||||  |||||||||||||||||    
T  30883175 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccc 30883127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 6e-80; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 47985047 - 47985268
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47985047 atgaccaccgtatacatgaggaacccccacctaacacaaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggc 47985146  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||| ||||        ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47985147 tggggatattaaaaaaaattggagggcagtaatactagtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgttt 47985245  T
Q  201 gca-cccctcagggtcgggcctg 222  Q
    ||| |||||||||| ||||||||    
T  47985246 gcaccccctcagggccgggcctg 47985268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 24525762 - 24525968
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||  |||||||||||| |||||||||||    
T  24525762 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaatatgcctaaaaggctaaaacaagggggcagaaaatggc 24525861  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  24525862 tgggggtattaaaaaaaattggagggcagtagtactagtgggtattaaaaaaaaaattgaggcccatgactaagggaggcccagctctgttgagctgttt 24525961  T
Q  201 gcacccc 207  Q
    |||||||    
T  24525962 gcacccc 24525968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 38414953 - 38415175
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  38414953 atgactactgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaagggaatagaaaatggc 38415052  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    || |||||||        |||||||||| |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  38415053 tgagggtattaaaaaaaattggagggcaataatactagtgggtattaaaaa-aaatttgaggcccatgactaagggaggcccagctctgttgagctgttt 38415151  T
Q  201 gca-cccctcagggtcgggcctga 223  Q
    ||| |||||||| | |||||||||    
T  38415152 gcatcccctcagagccgggcctga 38415175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 19692111 - 19691896
Alignment:
Q  9 cgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggta 108  Q
    |||||||||||||||| | | |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19692111 cgtatacatgaggaaccctcgcctaacaccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggttgggggta 19692012  T
Q  109 ttnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggccca-tgactgagggaggcccagctctgttgagctgtttgca-ccc 206  Q
    ||         |||||| ||||||||||||| ||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  19692011 ttaaaaaaaaatggaggacagtaatactagttggtattaaaaa-aaaattgaggcccattgactgagggaggcccagctctgttgagctgtttgcacccc 19691913  T
Q  207 ctcagggtcgggcctga 223  Q
    |||||||||||||||||    
T  19691912 ctcagggtcgggcctga 19691896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 20091358 - 20091579
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||| ||| |||||||     
T  20091358 atgactaccgtatacatgaggaacccccacctaacaccaaaagtaagaggacctaattctaataggcctaaaaggctaaaacaagggtacataaaatggt 20091457  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    ||||||||||         ||||||||||||| |||| |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  20091458 tgggggtattaaaaaaaaattggagggcagtagtactggtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctattgagctgtt 20091556  T
Q  200 tgcacccctcagggtcgggcctg 222  Q
    |||||||| ||||| ||||||||    
T  20091557 tgcaccccccagggacgggcctg 20091579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 10329487 - 10329710
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||| ||||||||    
T  10329487 atgactaccgtatacatgagaaacccccacttaacaccaaaagcaagaggacctaattctaataggcgtaaaaggctaaaacaaggggacaaaaaatggc 10329586  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| || ||| ||||||| ||||||    
T  10329587 tgggggtattaaaaaatattggagggcagtagtactagtgggtattaaaaaaaaaattgaggcccatgactgagggagacctagcgctgttgaactgttt 10329686  T
Q  201 gca-cccctcagggtcgggcctga 223  Q
    ||| |||||||||  |||||||||    
T  10329687 gcaccccctcaggaccgggcctga 10329710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 48983924 - 48984127
Alignment:
Q  4 actaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgg 103  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||| || |||||||||||||||||||||  ||||||||||| ||| ||||||| |||    
T  48983924 actaccgtatacatgaggaacccccacctaacaccaaaagtaagaggacttaattctaataggcctaaaaggctaaaacaagggtacaaaaaatggttgg 48984023  T
Q  104 gggtattnnnnnnnn-ttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgc 202  Q
    |||||||         ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48984024 gggtattaaaaaaaaattggagggcagtagtactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgc 48984122  T
Q  203 acccc 207  Q
    |||||    
T  48984123 acccc 48984127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 23551148 - 23551355
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||   ||||||||||||||| ||||||||    
T  23551148 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaagctaaaacaaggggacaaaaaatggc 23551247  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    | ||||||||         ||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||||| ||| |||| ||||||||||    
T  23551248 taggggtattaaattttttttggagggcagtagtactagtgggtattaaaaaaaaaattgaggcccatgattgagggaggtccaactctattgagctgtt 23551347  T
Q  200 tgcacccc 207  Q
    ||||||||    
T  23551348 tgcacccc 23551355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25010458 - 25010371
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaagggg 88  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  25010458 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaagggg 25010371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 8239712 - 8239539
Alignment:
Q  1 atgactaccgtatacatgaggaactcc--cacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||| ||||||||| ||||||||| ||  ||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||  |||||    
T  8239712 atgattaccgtatatatgaggaacccctccacttaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacaacaaatg 8239613  T
Q  99 gctgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactg 172  Q
    | ||||||||||        || ||||||| || ||||| ||||||||||||| ||| | ||||||||||||||    
T  8239612 gttgggggtattaaaaaaaattagagggcattagtactaatgggtattaaaaaaaaaatcgaggcccatgactg 8239539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 221
Target Start/End: Complemental strand, 25010356 - 25010254
Alignment:
Q  119 ttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgg 217  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||| |||    
T  25010356 ttggagggcagtagtactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccaactctgttgagctgtttgtaccccctcagggccgg 25010258  T
Q  218 gcct 221  Q
    ||||    
T  25010257 gcct 25010254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 8171616 - 8171706
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggaca 91  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  ||||||||  ||||||||| |||||    
T  8171616 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggaca 8171706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18776843 - 18776917
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  18776843 atgactaccgtatacatgagaaacccccacctaacaccaaaaacaagaggaactaattctaataatcctaaaaga 18776917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29077245 - 29077184
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||    
T  29077245 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaa 29077184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 17800348 - 17800394
Alignment:
Q  27 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  17800348 ccacctaacaccaaaagcaagaggacccaattctaataggcctaaaa 17800394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10955509 - 10955468
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  10955509 atgactaccgtatacatgaggaacccccacctaacaccaaaa 10955468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 23859049 - 23859002
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  23859049 cccacctaacaccaaatgcaagaggacccaattctaataggcctaaaa 23859002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 7398426 - 7398380
Alignment:
Q  27 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||| |||||||||||||||||| ||| |||||||||||||||||||    
T  7398426 ccacgtaacaccaaaagcaagaggacccaattctaataggcctaaaa 7398380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12596364 - 12596405
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  12596364 atgactaccgtatgcatgaggaacccccacctaacaccaaaa 12596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 28749647 - 28749597
Alignment:
Q  157 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  28749647 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 28749597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 26917810 - 26917855
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||  ||| |||||||||| ||||||||    
T  26917810 cacctaacaccaaaagcaagaagacccaattctaataagcctaaaa 26917855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 27237551 - 27237596
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||| ||||||||  ||| |||||||||||||||||||    
T  27237551 cacctaacaccataagcaagatgacccaattctaataggcctaaaa 27237596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 10027667 - 10027615
Alignment:
Q  174 gggaggcccagctctgttgagctgtttgcacc-cctcagggtcgggcctgatc 225  Q
    ||||||||||||||||| |||||||||||||| || ||||| ||| |||||||    
T  10027667 gggaggcccagctctgtagagctgtttgcacctccccagggccggccctgatc 10027615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 12419623 - 12419670
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattc--taataggcctaaaa 73  Q
    |||||||||||||||||||||| ||| |||||  ||||||||||||||    
T  12419623 cacctaacaccaaaagcaagaggacccaattctataataggcctaaaa 12419670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 12596443 - 12596479
Alignment:
Q  171 tgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||||||||||  ||||||||||||||||||    
T  12596443 tgagggaggcccagctcgtttgagctgtttgcacccc 12596479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 18777019 - 18777075
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc-cctcaggg 213  Q
    ||||||||||   |||||||||||||||||  |||||||||||||||| ||||||||    
T  18777019 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacctcctcaggg 18777075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 6e-80; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 26716152 - 26715931
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  26716152 atgactaccgtatacatgaggaacccccacctaacacaaaaagcaagagaacctaattctaataggtctaaaagactaaaacaaggggacataaaatggc 26716053  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26716052 tgggggtattaaaaaaaattgaagggcagtaatactagtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgttt 26715954  T
Q  201 gca-cccctcagggtcgggcctg 222  Q
    ||| |||||||||| ||||||||    
T  26715953 gcaccccctcagggccgggcctg 26715931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 27506818 - 27507041
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  27506818 atgactactgtatacatgaggaactcccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggagacagaaaatggc 27506917  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    ||||||||||         ||||||||||||| ||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  27506918 tgggggtattaaattttttttggagggcagtagtactaatgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtt 27507017  T
Q  200 tgca-cccctcagggtcgggcctg 222  Q
    |||| |||||||||| ||||||||    
T  27507018 tgcaccccctcagggacgggcctg 27507041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 9046053 - 9045848
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||| ||    
T  9046053 atgactaccgtatacatgaggaacccccacctaacacaaaaagcaagaggacctaattctaataagcctaaaagactaaaacaaggggacataaaatagc 9045954  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9045953 tgggggtattaaaaaaaattggagggcagtaatactaatgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgttt 9045855  T
Q  201 gcacccc 207  Q
    |||||||    
T  9045854 gcacccc 9045848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 10762643 - 10762865
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  10762643 atgactaccgtatacatgaggaacccccacctaacaccaaatgcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggc 10762742  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    || |||||||        ||||||| ||||| ||| ||||||||||||||| ||| ||||||||||||| ||||||| ||||||||||||||||||||||    
T  10762743 tgagggtattaaaaacaattggaggacagtagtaccagtgggtattaaaaaaaaaattgaggcccatgattgagggaagcccagctctgttgagctgttt 10762842  T
Q  201 gca-cccctcagggtcgggcctg 222  Q
    ||| |||||||||| ||| ||||    
T  10762843 gcatcccctcagggccggccctg 10762865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 8327671 - 8327488
Alignment:
Q  20 ggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctg-ggggtatt-nnnnnnn 117  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||            
T  8327671 ggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctggggggtattaaaaaaaa 8327572  T
Q  118 nttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgc 202  Q
     ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8327571 attggagggcagtagtactagtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgc 8327488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 24410461 - 24410234
Alignment:
Q  1 atgactaccgtatacatgaggaactccc-acctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaa-ggggacagaaaatg 98  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||| ||||||||||||| ||||||||||  |||||||| |||||||||||||     
T  24410461 atgactaccgtatacatgaggaaccccccacctaacaccaaaaacaagaggacctaattctaattggcctaaaaggctaaaacaagggggacagaaaata 24410362  T
Q  99 gctgggggtatt--nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagct 196  Q
    ||||||||||||          |||||||| |||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  24410361 gctgggggtattaaaaaaaaaattggagggtagtagtactaatgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagct 24410263  T
Q  197 gtttgca-cccctcagggtcgggcctgat 224  Q
    ||||||| ||||| |||| ||||||||||    
T  24410262 gtttgcacccccttagggacgggcctgat 24410234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 29939940 - 29940037
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||| ||||||||||||    
T  29939940 atgactaccgtatacatgaggaaccaccacctaacaccaaaagcaagaggaactaattctaatagacctaaaaggttaaaacaagaggacagaaaatg 29940037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3155241 - 3155167
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  3155241 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 3155167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 4505918 - 4505844
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  4505918 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 4505844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12337526 - 12337600
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  12337526 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 12337600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6965031 - 6964968
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaata 64  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||    
T  6965031 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaata 6964968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8907157 - 8907231
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||| |  |||||||||||  |||||||||    
T  8907157 atgactaccgtatacatgagaaacccccacctaacaccaaaatcaagaggaattaattctaataatcctaaaaga 8907231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 12134169 - 12134214
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  12134169 cacctaacaccaaaagcaagagaactcaattctaataggcctaaaa 12134214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 24035672 - 24035719
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  24035672 cccacctaacactaaaagcaagaggacctaattctaatagacctaaaa 24035719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 29694359 - 29694312
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  29694359 cccacctaacaccaaaagcaagaggacccaattctaataggtctaaaa 29694312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 4505744 - 4505695
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||| | |||||||||||||||||  ||||||||||||||||||    
T  4505744 tgaggcccatcattgagggaggcccagctcgtttgagctgtttgcacccc 4505695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 3952966 - 3952915
Alignment:
Q  156 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  3952966 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 3952915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 37182645 - 37182598
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||| |||||||||||  ||| |||||||||||||||||||    
T  37182645 cccacctaacagcaaaagcaagatgacccaattctaataggcctaaaa 37182598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 38400773 - 38400726
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||||  |||  ||||||||||||||||||    
T  38400773 cccacctaacaccaaaagcaagatgaccctattctaataggcctaaaa 38400726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 3155068 - 3155019
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  3155068 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 3155019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3953030 - 3952989
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||| |||||||| |||||||||| |||||||||||||||||    
T  3953030 atgattaccgtatgcatgaggaacccccacctaacaccaaaa 3952989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 5952949 - 5952986
Alignment:
Q  176 gaggcccagctctgttgagctgtttgcacccctcaggg 213  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  5952949 gaggcccagctcgtttgagctgtttgcacccctcaggg 5952986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 6964857 - 6964808
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  6964857 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 6964808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7162808 - 7162767
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||| ||||||||| || ||||||||||||||    
T  7162808 atgactaccgtatatatgaggaacccctacctaacaccaaaa 7162767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 11912887 - 11912932
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||||||| |||||  ||| |||||||||||||||||||    
T  11912887 cacctaacaccaaaatcaagatgacccaattctaataggcctaaaa 11912932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 52968 - 53020
Alignment:
Q  175 ggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgatca 226  Q
    ||||||||||||| || |||||| ||||| |||||||||||||| ||||||||    
T  52968 ggaggcccagctcagtagagctgcttgcaccccctcagggtcggccctgatca 53020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 10252375 - 10252335
Alignment:
Q  33 aacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||||||||  ||| |||||||||||||||||||    
T  10252375 aacaccaaaagcaagatgacccaattctaataggcctaaaa 10252335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 13800674 - 13800718
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaa 72  Q
    |||||||||||||||||||||  | | ||||||||||||||||||    
T  13800674 cacctaacaccaaaagcaagaagatccaattctaataggcctaaa 13800718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 4e-78; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 20711798 - 20712020
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||| ||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20711798 atgactaccgtatacatgaggaacccccatctaacattaaaagcaagatgacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 20711897  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20711898 tgggggtatt--aaaaaattggaggacagtaatactagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgttt 20711995  T
Q  201 gcacc-cctcagggtcgggcctgat 224  Q
    ||||| |||||||| ||||||||||    
T  20711996 gcacctcctcagggccgggcctgat 20712020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 27788766 - 27788972
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||| ||||| |||||||||||||||||     
T  27788766 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagatgacctaattttaataggcctaaaagactaaaataaggggacagaaaatggt 27788865  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27788866 tgggggtattaaaaaaaattggagggcagtaatactagtgggtattaaaaaaaaatttgaggcccatgactgagggaggcccagctctgttgagctgttt 27788965  T
Q  201 gcacccc 207  Q
    |||||||    
T  27788966 gcacccc 27788972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 17353982 - 17353757
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  17353982 atgactatcgtatacatgatgaacccccacctaacaccaaaagcaagaggacctaattctaatagacctaaaaggctaaaacaaggggacagaaaatggc 17353883  T
Q  101 tgggggtatt--nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgt 198  Q
    ||||||||||          || |||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  17353882 tgggggtattaaaaaaaaaattagagggcagtagtactagtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgt 17353784  T
Q  199 ttgca-cccctcagggtcgggcctgat 224  Q
    ||||| |||||||||| ||||||||||    
T  17353783 ttgcaccccctcagggccgggcctgat 17353757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 235304 - 235527
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||     
T  235304 atgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggg-acagaaaatggt 235401  T
Q  101 tgggggtattnnnnnnnntt-ggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    || |||||||        || ||||||||||| ||||||||||||||||||| ||| || ||| |||||||||||||||||||||||||||| |||||||    
T  235402 tgagggtattaaaaaaaatttggagggcagtagtactagtgggtattaaaaaaaaaattaaggtccatgactgagggaggcccagctctgttaagctgtt 235501  T
Q  200 tgca-cccctcagggtcgggcctgat 224  Q
    |||| |||||||||| ||||||||||    
T  235502 tgcaccccctcagggacgggcctgat 235527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 28075811 - 28075587
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||  |||||||||| |||||||||||||    
T  28075811 atgactaccgtatacatgaggaacccccacctaacaccaaaaacaagaggacctaattctaataggcataaaaggctaaaacaaggagacagaaaatggc 28075712  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    ||||||||||         ||||||| ||||| ||||||||||||||||||| ||| |||| |||||||||||| ||| ||| |||||||||||||||||    
T  28075711 tgggggtattaaaaaaaaattggaggacagtagtactagtgggtattaaaaaaaaaattgaagcccatgactgaaggaagcctagctctgttgagctgtt 28075612  T
Q  200 tgca-cccctcagggtcgggcctga 223  Q
    |||| |||||||| | |||||||||    
T  28075611 tgcaccccctcagagccgggcctga 28075587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 19987184 - 19986982
Alignment:
Q  6 taccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggg 105  Q
    |||| ||||||| |||||  |||||||||||||||||||||||  ||||||||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  19987184 taccatatacataaggaatccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacggaaaatggctgggg 19987085  T
Q  106 gtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcac 204  Q
    |||||         ||| ||||||||| ||||||||||||||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  19987084 gtattaaaaaaaaattgaagggcagtagtactagtgggtattaaaaaaaaatttgaggcccataattgagggaggcccagctctgttgagctgtttgcac 19986985  T
Q  205 ccc 207  Q
    |||    
T  19986984 ccc 19986982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 34397885 - 34397703
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||| |||| |||||||||||  |||| |||||||||||||||||  ||||||||||||||||||||||||  ||||||||| |||||||||||||     
T  34397885 atgactatcgtaaacatgaggaacctccacttaacaccaaaagcaagaagacctaattctaataggcctaaaaggctaaaacaagaggacagaaaatggt 34397786  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgagg-cccatgactgagggaggccca 183  Q
    ||||||||||        ||| ||||||||| ||||||||||||||||||| ||| |||||| |||||| ||| ||||||||||    
T  34397785 tgggggtattaaaaaaaattgaagggcagtattactagtgggtattaaaaa-aaaattgaggccccatggctgggggaggccca 34397703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 19737770 - 19737867
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | |||||| |||||  ||||||||  ||||||||| ||||||||||||    
T  19737770 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattttaataatcctaaaaggctaaaacaagaggacagaaaatg 19737867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 21280573 - 21280499
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  21280573 atgactaccgtatacatgaggaactcccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 21280499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13727477 - 13727551
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  13727477 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 13727551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 21479522 - 21479448
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  21479522 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 21479448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 33774145 - 33774071
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  33774145 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 33774071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24711077 - 24711118
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  24711077 atgactaccgtatacatgaggaacccccacctaacaccaaaa 24711118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 30832666 - 30832720
Alignment:
Q  156 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctca 210  Q
    ||||||||||||   |||||||||||||||||  |||||||||||||||||||||    
T  30832666 cttgaggcccatccttgagggaggcccagctcatttgagctgtttgcacccctca 30832720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30832602 - 30832643
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  30832602 atgactaccgtatgcatgaggaacccccacctaacaccaaaa 30832643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 23070889 - 23070939
Alignment:
Q  157 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  23070889 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 23070939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 11081684 - 11081733
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||| || ||||||||| |||||  ||||||||||||||||||    
T  11081684 tgaggcccatgccttagggaggcctagctccattgagctgtttgcacccc 11081733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 13727650 - 13727699
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  13727650 tgaggcccatctttgagggaggcccagctcgtttgagctgtttgcacccc 13727699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 19741212 - 19741273
Alignment:
Q  146 taaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||| ||| |||||| ||||   |||||||||||||||||  ||||||||||||||||||    
T  19741212 taaaaaaaaaattgaggtccatccttgagggaggcccagctcgtttgagctgtttgcacccc 19741273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 21280385 - 21280349
Alignment:
Q  171 tgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||||||||||  ||||||||||||||||||    
T  21280385 tgagggaggcccagctcgtttgagctgtttgcacccc 21280349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 27314778 - 27314814
Alignment:
Q  171 tgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||||||||||  ||||||||||||||||||    
T  27314778 tgagggaggcccagctcgtttgagctgtttgcacccc 27314814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 4e-78; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 9173100 - 9173322
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9173100 atgactaccgtatacatgaggaacccccacctaacaccaaaagtaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggc 9173199  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||| ||||        |||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  9173200 tggggatattaaaaaaaattggagggcaataatactagtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccaactctgttgagctgttt 9173298  T
Q  201 gca-cccctcagggtcgggcctga 223  Q
    ||| |||||||||| |||||||||    
T  9173299 gcaccccctcagggccgggcctga 9173322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 1366955 - 1367161
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1366955 atgactaccgtatacacgaggaacccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggc 1367054  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||    
T  1367055 tgggggtattaaaaaattttggagggcagtaatactagtgggtattaaaattttttttgaggcccatgactgagggaggcccagctctgttgagctgttt 1367154  T
Q  201 gcacccc 207  Q
    |||||||    
T  1367155 gcacccc 1367161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 19955753 - 19955544
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  19955753 atgactaccgtatatatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggc 19955654  T
Q  101 tgggggtat-tnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    |||||||||          ||||||||||| | ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||    
T  19955653 tgggggtataattttttttttggagggcagcagtactagtgggtattaaaaa-aaaattgaggcccatgactgagggaggtccagctctgttgagctgtt 19955555  T
Q  200 tgcacccctca 210  Q
    |||||||||||    
T  19955554 tgcacccctca 19955544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 40501867 - 40502090
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||  | ||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  40501867 atgactaccgtatacatgaagaacctccacctaacaccaaaagcaagatgatctaattctaatagacctaaaaggctaaaacaaggggacagaaaatggc 40501966  T
Q  101 tgggggtattnnnnnnnnttg-gagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    ||||||||||        ||  |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  40501967 tgggggtattaaaaaaaatttagagggcagtagtactagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtt 40502066  T
Q  200 tgca-cccctcagggtcgggcctg 222  Q
    |||| |||||||||| ||||||||    
T  40502067 tgcaccccctcagggacgggcctg 40502090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 13913559 - 13913782
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||  ||||||||||||||||||||||||  |||||||| ||||||||||||||     
T  13913559 atgactaccgtatacatgagaaacccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaatgggacagaaaatggt 13913658  T
Q  101 tgggggtatt--nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgt 198  Q
    ||||||||||          ||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  13913659 tgggggtattaaaaaaaaaattgaagggcagtagtactagtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgt 13913757  T
Q  199 ttgca-cccctcagggtcgggcctg 222  Q
    ||||| |||||||||| ||||||||    
T  13913758 ttgcaccccctcagggacgggcctg 13913782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 17168992 - 17168769
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17168992 atgactaccatatacatgaggaacccctacctaacaccaaaagcaagaagacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggc 17168893  T
Q  101 tgggggtatt---nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctg 197  Q
    ||||||||||           ||||||||||||| ||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||| ||||||||    
T  17168892 tgggggtattaaaaaagaaaattggagggcagtagtactagtgggtattaaaa--aaaattgaggcccatgactgagggaggccaagctctattgagctg 17168795  T
Q  198 tttgca-cccctcagggtcgggcctg 222  Q
    |||||| |||||||||||||||||||    
T  17168794 tttgcatcccctcagggtcgggcctg 17168769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 44895688 - 44895466
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  44895688 atgattaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaagggacagaaaatggc 44895589  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    | ||||||||        ||||||| ||||| ||||||||| ||||||||| |||  || ||||||||||||||||||||||||||||||||||||||||    
T  44895588 t-ggggtattaaaaaaaattggaggacagtagtactagtggatattaaaaaaaaaaatgtggcccatgactgagggaggcccagctctgttgagctgttt 44895490  T
Q  201 gca-cccctcagggtcgggcctga 223  Q
    ||| |||||||||| || ||||||    
T  44895489 gcaccccctcagggccgagcctga 44895466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 27559673 - 27559463
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  27559673 atgactaccgtatacatgaggaacccccacctaacaccataagtaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggc 27559574  T
Q  101 tgggggtatt---nnnnnnnnttggagggcagtaatactagtgggtatt-aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagct 196  Q
    ||||||||||           || |||||||||| |||||||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  27559573 tgggggtattaaaaaaaaaaatttgagggcagtagtactagtgggtattaaaaaaaaaaattgaggcccatgactgagggaggtccagctctgttgagct 27559474  T
Q  197 gtttgcacccc 207  Q
    |||||||||||    
T  27559473 gtttgcacccc 27559463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 51607517 - 51607742
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||| || |||||||||||||||||||||  ||||| ||||| ||||||||| ||    
T  51607517 atgactaccgtatacatgaggaactcccatctaataccaaaagcaagaggacataattctaataggcctaaaaggctaaaa-aagggaacagaaaat-gc 51607614  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtatt-aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgt 198  Q
    ||||||||||         ||| ||||||||| ||||||||| |||| ||||| |||  |||||||||||| ||||| |||||||||||| |||||||||    
T  51607615 tgggggtattaaaaaaaaattgaagggcagtagtactagtggatattaaaaaaaaaaaatgaggcccatgattgaggaaggcccagctctattgagctgt 51607714  T
Q  199 ttgcacc-cctcagggtcgggcctgatc 225  Q
    ||||||| ||||| |  |||||||||||    
T  51607715 ttgcaccacctcatgaccgggcctgatc 51607742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 23185463 - 23185366
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  23185463 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggaactaattctaataggcctaaaaggctaaaacaagaggacagaaaatg 23185366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 4971695 - 4971792
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||  ||||||||| ||||| ||||||    
T  4971695 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggaactaattctaataggcctaaaaggctaaaacaagaggacaaaaaatg 4971792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9181082 - 9181155
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaag 74  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9181082 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaag 9181155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5316716 - 5316626
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggaca 91  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  ||||||||  ||||||||| |||||    
T  5316716 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggaca 5316626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27906794 - 27906868
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  27906794 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 27906868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44655777 - 44655703
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  44655777 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 44655703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 50881466 - 50881369
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||| |||||||||||||||  ||||||||||||||||  ||||| | ||||||||||||  ||||||||  ||||||||| ||||||||||||    
T  50881466 atgactacagtatacatgaggaacctccacctaacaccaaaattaagaggaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 50881369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3406454 - 3406413
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  3406454 atgactaccgtatacatgaggaacccccacctaacaccaaaa 3406413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3440366 - 3440407
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  3440366 atgactaccgtatacatgaggaacccccacctaacaccaaaa 3440407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5027585 - 5027528
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaatt 58  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||||| | ||||||    
T  5027585 atgactaccatatagatgaggaacccccacctaacaccaaaagcaagaggaactaatt 5027528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14146336 - 14146295
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14146336 atgactaccgtatacatgaggaacccccacctaacaccaaaa 14146295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41697214 - 41697255
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  41697214 atgactaccgtatacatgaggaacccccacctaacaccaaaa 41697255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 23181801 - 23181727
Alignment:
Q  132 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||| ||||||| ||||| ||| ||||||||||| | || ||| |||||||||| |||||||||||||||||||    
T  23181801 atactaatgggtataaaaaa-aaatttgaggcccatcattgggggtggcccagctcggttgagctgtttgcacccc 23181727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 39134849 - 39134896
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  39134849 cccacctaacaccaaaagcaagaggacccaattctaataggcttaaaa 39134896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 5533302 - 5533251
Alignment:
Q  22 aactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||||||| |||||||||||| | | ||||||||||||| |||||    
T  5533302 aactcccacctaacatcaaaagcaagaggatccaattctaataggcgtaaaa 5533251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 14146272 - 14146221
Alignment:
Q  156 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  14146272 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 14146221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 5027991 - 5028024
Alignment:
Q  174 gggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||||||| |||||||||||||||||||    
T  5027991 gggaggcccagctcggttgagctgtttgcacccc 5028024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6771827 - 6771786
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||| |||||||  ||||||||||||||||    
T  6771827 atgactaccgtatacacgaggaacctccacctaacaccaaaa 6771786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16140091 - 16140050
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||||||  |||||||||||| ||||    
T  16140091 atgactaccgtatacatgaggaatccccacctaacactaaaa 16140050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 26803934 - 26803889
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||||||||||||| |||  |||||||||||| ||||||    
T  26803934 cacctaacaccaaaagcaagataactcaattctaataggactaaaa 26803889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 27906949 - 27906998
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  27906949 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 27906998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 38547162 - 38547207
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaa 71  Q
    |||||||||||| ||||| ||||| ||| |||||||||||||||||    
T  38547162 cccacctaacactaaaagtaagaggaccaaattctaataggcctaa 38547207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 44655604 - 44655555
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  44655604 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 44655555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 41697293 - 41697329
Alignment:
Q  171 tgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||||||||||  ||||||||||||||||||    
T  41697293 tgagggaggcccagctcgtttgagctgtttgcacccc 41697329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 9e-76; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 16198869 - 16199076
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  16198869 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggc 16198968  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    ||||||||||         ||||||||||||| || |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  16198969 tgggggtattaaaaaaaaattggagggcagtagtattagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtt 16199068  T
Q  200 tgcacccc 207  Q
    ||||||||    
T  16199069 tgcacccc 16199076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 38869438 - 38869660
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  38869438 atgactaccgtatacatgagaaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatgac 38869537  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||| | ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  38869538 tgggggtattaaaaaaaattggatgacagtaatactagtgggtattaaaaa-aaatttgaggcccatgactgagggaggcccagctttgttgagctgttt 38869636  T
Q  201 gca-cccctcagggtcgggcctga 223  Q
    ||| ||||||| || |||||||||    
T  38869637 gcaccccctcatggccgggcctga 38869660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 27924107 - 27923885
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||||||||||||||||||||| |||||||||| ||||||||||||     
T  27924107 atgactaccgtatacatgaggaacgcccgcctaacaccaaaagcaaaaggacctaattctaataggcctaaaagactaaaacaaggagacagaaaatggt 27924008  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    ||||| ||||         ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||    
T  27924007 tggggatattaaaaaaaaattggagggcagtagtactagtgggtattaaaaa-aaaattgaggcccatgactgagggaggtccagctctgttgagctgtt 27923909  T
Q  200 tgca-cccctcagggtcgggcctg 222  Q
    |||| |||||||||| ||||||||    
T  27923908 tgcaccccctcagggacgggcctg 27923885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 7670949 - 7670728
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  7670949 atgactaccgtatacatgaggtatccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggc 7670850  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    ||||||||||         ||||||| ||||| ||||||||||| ||||||| ||| || || ||||||||||||||||||||| |||||||||||||||    
T  7670849 tgggggtattaaaaaaaaattggaggacagtagtactagtgggtgttaaaaa-aaaattaagacccatgactgagggaggcccaactctgttgagctgtt 7670751  T
Q  200 tgcacccctcagggtcgggcctg 222  Q
    |||||||||||||| ||||||||    
T  7670750 tgcacccctcagggccgggcctg 7670728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 9364316 - 9364113
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  9364316 atgactaccgtatacatgaggaacccccacctaacatcaaaagcaagaggacctaattctaatagacctaaaagactaaaacaaggggacataaaatggc 9364217  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    ||||||||||         |||||| |||||| ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  9364216 tgggggtattaaaaaaaaattggagagcagtagtactagtggatattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtt 9364118  T
Q  200 tgcac 204  Q
    |||||    
T  9364117 tgcac 9364113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 40389611 - 40389831
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||  ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  40389611 atgactaccgtatttatgaggaacccccacctaacactaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggc 40389710  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||| |||| || ||||||||||||||||||  ||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  40389711 tgggggtattaaaaacaattggatggcaatagtactagtgggtattaaaa--aaaattgaggtccatgactgagggaggcccaggtctgttgagctgttt 40389808  T
Q  201 gcaccc-ctcagggtcgggcctg 222  Q
    |||||| ||||||| ||||||||    
T  40389809 gcacccgctcagggccgggcctg 40389831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 16799402 - 16799606
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| |||| |||    
T  16799402 atgattaccgtatacatgaggaacccccacataacaccaaaagcaagaggacctaattctaatagacctaaaagactaaaacaaggggaca-aaaaaggc 16799500  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||||||||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  16799501 tgggggtattaaaaaaagttggagggcagtaatactaatgggtgttaaaaa-aaaattgaggcccatgactgagggaggcctagctctattgagctgttt 16799599  T
Q  201 gcacccc 207  Q
    |||||||    
T  16799600 gcacccc 16799606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 28822417 - 28822583
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||     
T  28822417 atgactaccgtatacatgatgaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacataaaatggt 28822516  T
Q  101 t-gggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggccca 166  Q
    | |||||||||        |||||||||||||||||||||| |||||||||| ||| ||||||||||    
T  28822517 tggggggtattaaaaacaattggagggcagtaatactagtgtgtattaaaaaaaaaattgaggccca 28822583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 16592149 - 16592243
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaa 95  Q
    |||||||||||||| ||||||||| ||||||||||||||||| |||||| | ||||||||||||  ||||||||  |||||||||  ||||||||    
T  16592149 atgactaccgtatatatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagatgacagaaa 16592243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34756441 - 34756515
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||| | ||||||||||||  |||||||||    
T  34756441 atgactaccgtatacatgaggaacccccacctaacaacaaaatcaagaggaactaattctaataatcctaaaaga 34756515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 27079036 - 27078939
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||| ||||||||||||||| |||||||||||||||||   |||| | ||||||| ||||  ||||||||  ||||||||| ||||||||||||    
T  27079036 atgactactgtatacatgaggaacccccacctaacaccaaaatatagaggaactaattccaataatcctaaaaggctaaaacaagaggacagaaaatg 27078939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 30854354 - 30854258
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    ||||||| |||||||||||||||| |||||||||||||||||  ||||| | ||||||||||||  ||||||||  ||||||||| ||||| ||||||    
T  30854354 atgactatcgtatacatgaggaacccccacctaacaccaaaa-taagaggaactaattctaataatcctaaaaggctaaaacaagaggacataaaatg 30854258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2274915 - 2274874
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  2274915 atgactaccgtatacacgaggaacccccacctaacaccaaaa 2274874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15480164 - 15480205
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  15480164 atgactaccgtatgcatgaggaacccccacctaacaccaaaa 15480205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 15639620 - 15639575
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||    
T  15639620 cacctaacaccaaaagtaagaggacccaattctaataggcctaaaa 15639575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19523224 - 19523183
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  19523224 atgactaccatatacatgaggaacccccacctaacaccaaaa 19523183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 34425877 - 34425832
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||    
T  34425877 cacctaacaccaaaagcaagaggactcaattctaataggcctaaaa 34425832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 15480228 - 15480279
Alignment:
Q  156 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  15480228 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 15480279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 19523160 - 19523109
Alignment:
Q  156 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  19523160 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 19523109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 22648860 - 22648899
Alignment:
Q  27 ccacctaacaccaaaagcaagagaacctaattctaatagg 66  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  22648860 ccacctaacaccaaaagcaagagaatcaaattctaatagg 22648899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 11242447 - 11242489
Alignment:
Q  31 ctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||    
T  11242447 ctaacaccaaaagcaagaggacccaattctaataggcataaaa 11242489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 2024766 - 2024811
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||| ||  |||||||||| ||||||||    
T  2024766 cacctaacaccaaaagcaagaggactcaattctaatatgcctaaaa 2024811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 34756615 - 34756664
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  34756615 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 34756664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36187954 - 36187995
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||| |||  ||||||||||||||||    
T  36187954 atgactaccgtatacatgagaaacctccacctaacaccaaaa 36187995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 7079605 - 7079561
Alignment:
Q  29 acctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||| |||||||||||  |||||||||||||||| ||||||    
T  7079605 acctaacatcaaaagcaagatgacctaattctaataggtctaaaa 7079561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 22987481 - 22987517
Alignment:
Q  171 tgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||||||||||  ||||||||||||||||||    
T  22987481 tgagggaggcccagctcgtttgagctgtttgcacccc 22987517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 30853350 - 30853282
Alignment:
Q  139 tgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||| ||||| ||| |||||| ||||   ||| |||||||||||||  ||||||||||||||||||    
T  30853350 tgggtataaaaaaaaaaattgaggtccatccttgaaggaggcccagctcgtttgagctgtttgcacccc 30853282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 31881604 - 31881640
Alignment:
Q  171 tgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||||||||||  ||||||||||||||||||    
T  31881604 tgagggaggcccagctcgtttgagctgtttgcacccc 31881640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 34855989 - 34855925
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcagggtcgggcctg 222  Q
    ||||||||||  || |||||||||||||||  || ||||||||||| |||| |||| ||||||||    
T  34855989 tgaggcccataccttagggaggcccagctccatttagctgtttgcatccctaagggccgggcctg 34855925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 40794452 - 40794496
Alignment:
Q  29 acctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||||||| ||||| ||| |||||||||| ||||||||    
T  40794452 acctaacaccaaaagtaagaggacccaattctaataagcctaaaa 40794496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 24969467 - 24969258
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  24969467 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggatctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggc 24969368  T
Q  101 tgggggtatt---nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctg 197  Q
    ||||||||||           ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  24969367 tgggggtattaaaaaaaaaaattggagggcagtagtactagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctg 24969268  T
Q  198 tttgcacccc 207  Q
    ||||||||||    
T  24969267 tttgcacccc 24969258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 40089546 - 40089328
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  40089546 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggc 40089447  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    || |||||||         |||||||||| || ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  40089446 tgagggtattaaaaaaaaattggagggcactagtactagtgggtattaaaaa-aaaattgaggcccatgactgagggaggcccagctctgttgagctgtt 40089348  T
Q  200 tgcacccctcagggtcgggc 219  Q
    ||||||||||| || |||||    
T  40089347 tgcacccctcatggccgggc 40089328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 32128614 - 32128408
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||| ||||||||    
T  32128614 atgactaccgtatacataagaaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaagactgaaacaaggggacataaaatggc 32128515  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||| ||||||||||||||||||||||||| ||| |||||| |||| ||||||||||||||||||||||||||||||||    
T  32128514 tgggggtattaaaaaaaattggaggacagtaatactagtgggtattaaaaaaaaaattgaggtccataactgagggaggcccagctctgttgagctgttt 32128415  T
Q  201 gcacccc 207  Q
    |||||||    
T  32128414 gcacccc 32128408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 16845051 - 16844843
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||     
T  16845051 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggt 16844952  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggta-ttaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgt 198  Q
     |||||||||         ||||||| |||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  16844951 cgggggtattaaaaaaaaattggaggacagtaatactagtgggtatttaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgt 16844852  T
Q  199 ttgcacccc 207  Q
    |||||||||    
T  16844851 ttgcacccc 16844843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 19498534 - 19498313
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  19498534 atgactactgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagataatggc 19498435  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||||||||| ||||||||||||||||||| ||| ||||||||||||| || |||||||||||| |||||||||| |||    
T  19498434 tgggggtattaaaaaaaattggagggcagtagtactagtgggtattaaaaa-aaaattgaggcccatgattgggggaggcccagcactgttgagctattt 19498336  T
Q  201 gcacccc-tcagggtcgggcctg 222  Q
    ||||||| |||||| ||||||||    
T  19498335 gcaccccgtcagggccgggcctg 19498313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 2790818 - 2791044
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  2790818 atgactaccgtatacatgaggaacccccacctaatggcaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacataaaatggc 2790917  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||| ||| ||||||||||||||||| || |||| ||| |||| | ||||||||||||||| |||||||||||||||||||||    
T  2790918 tgggggtattaaaaataattgaaggacagtaatactagtgggttttcaaaaaaaaattgacgtccatgactgagggagacccagctctgttgagctgttt 2791017  T
Q  201 gca-cccctcagggtcgggcctgatca 226  Q
    ||| |||||||| ||||||||||||||    
T  2791018 gcaccccctcagagtcgggcctgatca 2791044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 16882472 - 16882675
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||  ||| ||||| | |||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| ||    
T  16882472 atgactaccgtatgtatggggaaccctcacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatagc 16882571  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        ||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||| ||||||||||||||||||||||    
T  16882572 tgggggtattaaaaaaaattggagggcagtaatactagtgggtattaaaaa-aaaattgaggctcatgactaagggaagcccagctctgttgagctgttt 16882670  T
Q  201 gcacc 205  Q
    |||||    
T  16882671 gcacc 16882675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 34027609 - 34027407
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  34027609 atgactacggtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggc 34027510  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgttt 200  Q
    ||||||||||        |||| |||||||| ||| |  |||||||||||| ||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  34027509 tgggggtatt-aaaaaaattggcgggcagtagtaccatagggtattaaaaaaaaaattgaggcccatgactgagggagacccagctctgttgagcagttt 34027411  T
Q  201 gcac 204  Q
    ||||    
T  34027410 gcac 34027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 38352332 - 38352554
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  38352332 atgactaccgtgtacatgaggaacccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggc 38352431  T
Q  101 tgggggtatt-nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtt 199  Q
    ||||||||||         ||||| ||||||| ||||||||||||||||        ||||||||||||||| |||||||||||||||||||||||||||    
T  38352432 tgggggtattaaaaaaaaattggaaggcagtagtactagtgggtattaattttttttttgaggcccatgactaagggaggcccagctctgttgagctgtt 38352531  T
Q  200 tgcacccctcagggtcgggcctg 222  Q
    |||||||||||||| ||||||||    
T  38352532 tgcacccctcagggccgggcctg 38352554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 54083319 - 54083541
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  54083319 atgactaccgtatacatgaggaacccctacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggagacagaaaatggc 54083418  T
Q  101 tgggggtatt---nnnnnnnnttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctg 197  Q
    | ||||||||            |||||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||||||    
T  54083419 taggggtattaaaaaaataaaatggaggacagtagtactagtgggtattaaaaaaaaaattgaggcccatgactgagggatgcccagctctattgagctg 54083518  T
Q  198 tttgca-cccctcagggtcgggc 219  Q
    |||||| |||||||||| |||||    
T  54083519 tttgcaccccctcagggacgggc 54083541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 37777300 - 37777509
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| | || ||||||||||||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||| ||    
T  37777300 atgactaccgtatacatgaggaaccctcaactaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatagc 37777399  T
Q  101 tgggggtatt--nnnnnnnnttggagggcagtaatactagtgggtatt-aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctg 197  Q
    ||| ||||||          ||||||||||||| |||||||||||||| ||||| ||| ||||||||||||| ||||||||| |||||||||||||||||    
T  37777400 tggaggtattaaaaaaaaaattggagggcagtagtactagtgggtattaaaaaaaaaaattgaggcccatgattgagggaggtccagctctgttgagctg 37777499  T
Q  198 tttgcacccc 207  Q
    ||||||||||    
T  37777500 tttgcacccc 37777509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 43455608 - 43455746
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  43455608 atgactaccgtatacatgaggaacccccacctaacaccgaaagtaagaggacctaattcaaataggcctaaaagactaaaacaaggggacagaaaatggc 43455707  T
Q  101 tgggggtattnnnnnnnnttggagggcagtaatactagtgg 141  Q
    ||||||||||        |||||||||||||||||||||||    
T  43455708 tgggggtatt--aaaaaattggagggcagtaatactagtgg 43455746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 35465134 - 35465040
Alignment:
Q  4 actaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |  ||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  35465134 actaccgtatacatgaggaatccccacctaacaccaaaagcaacatgacctaattctaataggcctaaaaggctaaaacaagaggacagaaaatg 35465040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 47129017 - 47128920
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  ||||||||  ||||||||| ||||||||||||    
T  47129017 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 47128920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10978930 - 10978833
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  ||||||||  ||||||||| | ||||||||||    
T  10978930 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagagaacagaaaatg 10978833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23509875 - 23509972
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||||| ||||||||||| ||||||||||||||||| |||||| | ||||||||||||  ||||||||  ||||||||| ||||||||||||    
T  23509875 atgactaccgtagacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 23509972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10428282 - 10428379
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    ||||||||||||||||||||||||  |||||||||||||||| |||||| | |||||| |||||  ||||||||  ||||||||| ||||||||||||    
T  10428282 atgactaccgtatacatgaggaacctccacctaacaccaaaatcaagaggaactaattataataatcctaaaaggctaaaacaagaggacagaaaatg 10428379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 13460237 - 13460140
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    ||||||||||||||||| |||||| ||||||||||||||||| |||||| | ||||||||||||  ||||||||  |||||||||  |||||||||||    
T  13460237 atgactaccgtatacataaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaagacagaaaatg 13460140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 35779402 - 35779499
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||| |||||||||||||||||||   ||||||||| |||||||||||| | ||||||||||||||||||||||  ||||||||| || |||||||||    
T  35779402 atgattaccgtatacatgaggaaccttcacctaacatcaaaagcaagaggaactaattctaataggcctaaaaggctaaaacaagagggcagaaaatg 35779499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34768651 - 34768741
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggaca 91  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  ||||||||  ||||||||| |||||    
T  34768651 atgattaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggaca 34768741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 38209668 - 38209742
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  38209668 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 38209742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 55255299 - 55255225
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||  |||||||||    
T  55255299 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaaga 55255225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 48209270 - 48209173
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||  | ||||||||||||  |||| |||  ||||||||| ||||||||||||    
T  48209270 atgactaccgtatacatgagaaacccccacctaacaccaaaatcaagaagaactaattctaataatcctataaggctaaaacaagaggacagaaaatg 48209173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 35464016 - 35463958
Alignment:
Q  148 aaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc 206  Q
    |||| ||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||    
T  35464016 aaaaaaaaattgatgcccatggctgggggaggcccagctctgttgagctgtttgcaccc 35463958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 36118584 - 36118632
Alignment:
Q  27 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaaga 75  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  36118584 ccacctaacaccaaaagcaagatgacccaattctaataggcctaaaaga 36118632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 37746847 - 37746894
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||    
T  37746847 cccacctaacaccaaaagcaagatgacccaattctaataggcctaaaa 37746894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 5128919 - 5128960
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  5128919 atgactaccgtatacatgaggaacctccacctaacaccaaaa 5128960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32915415 - 32915374
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  32915415 atgattaccgtatacatgaggaacccccacctaacaccaaaa 32915374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 54779490 - 54779441
Alignment:
Q  174 gggaggcccagctctgttgagctgtttgcac-ccctcagggtcgggcctg 222  Q
    |||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  54779490 gggaggcccagctcggttgagctgtttgcactccctcagggccgggcctg 54779441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 2135447 - 2135491
Alignment:
Q  29 acctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||||    
T  2135447 acctaacaccaaaagcaagaggacccaattctaataagcctaaaa 2135491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 38209842 - 38209894
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctca 210  Q
    ||||||||||   |||||||||||||||||  |||||||||||||||||||||    
T  38209842 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccctca 38209894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 54780807 - 54780771
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacac 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  54780807 atgactaccgtatacatgaggaacccccacctaacac 54780771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 1105498 - 1105447
Alignment:
Q  156 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  1105498 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 1105447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 10431421 - 10431492
Alignment:
Q  136 tagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||| ||||| |   |||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  10431421 tagtgggtataaaaaatatttttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 10431492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 35780532 - 35780606
Alignment:
Q  132 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||| ||| ||||||||| ||| |||||||| ||   || |||||||||||||| |||||||||||||||||||    
T  35780532 atactactggatattaaaaaaaaa-ttgaggcctatccgtgggggaggcccagctcggttgagctgtttgcacccc 35780606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 39329518 - 39329565
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||| |||||||||||||||||  ||| |||||||||||||||||||    
T  39329518 cccacataacaccaaaagcaagaagaccaaattctaataggcctaaaa 39329565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 9579483 - 9579525
Alignment:
Q  171 tgagggaggcccagctctgttgagctgtttgcacccctcaggg 213  Q
    |||||||||||||||||  ||||||||||||||| ||||||||    
T  9579483 tgagggaggcccagctcgtttgagctgtttgcacgcctcaggg 9579525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 9585178 - 9585220
Alignment:
Q  171 tgagggaggcccagctctgttgagctgtttgcacccctcaggg 213  Q
    |||||||||||||||||  ||||||||||||||| ||||||||    
T  9585178 tgagggaggcccagctcgtttgagctgtttgcacgcctcaggg 9585220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 15735076 - 15735030
Alignment:
Q  27 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||||||||||||||  ||| |||||||| ||||||||||    
T  15735076 ccacctaacaccaaaagcaagaagacccaattctaacaggcctaaaa 15735030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 30507199 - 30507245
Alignment:
Q  27 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||||||||||||||| ||  |||||| ||||||||||||    
T  30507199 ccacctaacaccaaaagcaagaggactcaattcttataggcctaaaa 30507245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 45560704 - 45560754
Alignment:
Q  157 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  45560704 ttgaggcccatctttgagggaggcccagctcgtttgagctgtttgcacccc 45560754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1105562 - 1105521
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    ||||||||| |||||||||| ||| |||||||||||||||||    
T  1105562 atgactaccatatacatgagcaacccccacctaacaccaaaa 1105521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 36178652 - 36178607
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||| |||  |||||||| |||||||||    
T  36178652 cacctaacaccaaaagcaagaggacccgattctaatgggcctaaaa 36178607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37514689 - 37514648
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    ||||||||||||||||||| |||  |||||||||||||||||    
T  37514689 atgactaccgtatacatgaagaatccccacctaacaccaaaa 37514648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 40217209 - 40217164
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||||||||||| |  ||| |||||||||||||||||||    
T  40217209 cacctaacaccaaaagcaaaatgacccaattctaataggcctaaaa 40217164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 55255145 - 55255096
Alignment:
Q  158 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  55255145 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 55255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 5128997 - 5129033
Alignment:
Q  171 tgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||||||||||  ||||||||||||||||||    
T  5128997 tgagggaggcccagctcgtttgagctgtttgcacccc 5129033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 17679293 - 17679233
Alignment:
Q  147 aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||| ||| |||||||||||   |||||||||| ||||||  ||||||||||||||||||    
T  17679293 aaaaataaaattgaggcccatccttgagggaggctcagctcgtttgagctgtttgcacccc 17679233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 47128057 - 47127997
Alignment:
Q  147 aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    ||||| ||| |||||||||||   |||||||||||||||||  ||| ||||||||||||||    
T  47128057 aaaaaaaaaattgaggcccatccttgagggaggcccagctcgtttgggctgtttgcacccc 47127997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 106563 - 106459
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  106563 atgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaaatctaataggcctaaaagactaaaacaaggggacataaaatggc 106464  T
Q  101 tgggg 105  Q
    |||||    
T  106463 tgggg 106459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 106454 - 106379
Alignment:
Q  148 aaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc-ctcagggtcgggcctg 222  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  106454 aaaaaaaatttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccctctcagggccgggcctg 106379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 4252 - 4147
Alignment:
Q  119 ttggagggcagtaatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc-ctcagggtcgg 217  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| |||    
T  4252 ttggagggcagtagtactagtgggtattaaaaaaaaa-ttgaggcccatgactggaggaggcccagctctgttgagctgtttgcaccctctcagggccgg 4154  T
Q  218 gcctgat 224  Q
     ||||||    
T  4153 ccctgat 4147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1368 - 1271
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatg 98  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | |||||| |||||  |||||||| |||||||||| ||||| ||||||    
T  1368 atgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattttaataatcctaaaaggttaaaacaagaggacaaaaaatg 1271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 1063 - 1027
Alignment:
Q  171 tgagggaggcccagctctgttgagctgtttgcacccc 207  Q
    |||||||||||||||||  ||||||||||||||||||    
T  1063 tgagggaggcccagctcgtttgagctgtttgcacccc 1027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 230986 - 231033
Alignment:
Q  26 cccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||    
T  230986 cccacctaacaccaaaagcaagaggacccgattctaataggcctaaaa 231033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 40058 - 40012
Alignment:
Q  27 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  40058 ccacctaacacaaaaagcaagaggacccaattctaataggcctaaaa 40012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 138118 - 138072
Alignment:
Q  27 ccacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  138118 ccacctaacacaaaaagcaagaggacccaattctaataggcctaaaa 138072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 181944 - 181903
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaa 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  181944 atgactaccgtatacatgaggaacccccatctaacaccaaaa 181903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23908 - 23803
Alignment:
Q  1 atgactaccgtatacatgaggaactcccacctaacaccaaaagcaagagaacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggc 100  Q
    ||||||||||||||||  || ||| ||||| | |||| ||| |||| | |||||| ||||| ||||||||||| |   ||||| ||||||| ||||||||    
T  23908 atgactaccgtatacacaagaaacccccactttacacaaaaggcaa-ataacctatttctattaggcctaaaaaacataaacagggggacaaaaaatggc 23810  T
Q  101 tgggggt 107  Q
    |||||||    
T  23809 tgggggt 23803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 1330 - 1285
Alignment:
Q  28 cacctaacaccaaaagcaagagaacctaattctaataggcctaaaa 73  Q
    |||||||||||||||| ||||| ||| |||||||| ||||||||||    
T  1330 cacctaacaccaaaagtaagaggacccaattctaacaggcctaaaa 1285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University