View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18323_low_8 (Length: 541)

Name: NF18323_low_8
Description: NF18323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18323_low_8
NF18323_low_8
[»] chr8 (67 HSPs)
chr8 (110-524)||(3240090-3240505)
chr8 (301-518)||(18890669-18890889)
chr8 (301-477)||(24099266-24099446)
chr8 (307-523)||(1239362-1239581)
chr8 (301-523)||(8443476-8443704)
chr8 (301-497)||(41896416-41896615)
chr8 (306-523)||(5333337-5333553)
chr8 (340-523)||(39657391-39657578)
chr8 (307-523)||(15344217-15344432)
chr8 (307-523)||(15433282-15433497)
chr8 (307-523)||(15524586-15524801)
chr8 (360-523)||(1236662-1236824)
chr8 (383-518)||(29617244-29617379)
chr8 (301-415)||(14585605-14585718)
chr8 (406-523)||(8981170-8981287)
chr8 (360-523)||(14916152-14916315)
chr8 (302-499)||(8826116-8826311)
chr8 (301-523)||(23230550-23230767)
chr8 (301-523)||(7883206-7883423)
chr8 (407-523)||(21237798-21237914)
chr8 (302-523)||(45445776-45445994)
chr8 (287-488)||(20227281-20227483)
chr8 (383-463)||(36532906-36532986)
chr8 (360-522)||(37971247-37971406)
chr8 (318-523)||(471131-471333)
chr8 (295-499)||(27498354-27498553)
chr8 (321-462)||(24419202-24419342)
chr8 (387-464)||(28239846-28239923)
chr8 (301-523)||(20553206-20553429)
chr8 (301-523)||(40211267-40211488)
chr8 (331-523)||(10377625-10377813)
chr8 (302-352)||(21237702-21237752)
chr8 (301-523)||(20559709-20559929)
chr8 (301-523)||(20571271-20571491)
chr8 (308-418)||(34492973-34493084)
chr8 (387-464)||(44099928-44100005)
chr8 (304-404)||(40619154-40619253)
chr8 (289-441)||(36948484-36948633)
chr8 (301-523)||(14544868-14545085)
chr8 (360-523)||(16247188-16247348)
chr8 (287-357)||(24186786-24186858)
chr8 (385-458)||(33342448-33342521)
chr8 (387-463)||(9619352-9619428)
chr8 (443-523)||(42046265-42046345)
chr8 (387-463)||(43192341-43192417)
chr8 (387-458)||(19876224-19876295)
chr8 (301-422)||(43834063-43834183)
chr8 (301-463)||(3673350-3673505)
chr8 (360-478)||(34609794-34609911)
chr8 (410-488)||(39450552-39450630)
chr8 (387-463)||(2655883-2655959)
chr8 (387-463)||(4808977-4809053)
chr8 (387-463)||(11464184-11464260)
chr8 (382-476)||(25191079-25191170)
chr8 (376-464)||(26469232-26469320)
chr8 (385-461)||(33298866-33298942)
chr8 (355-402)||(5917714-5917761)
chr8 (387-458)||(11196902-11196973)
chr8 (385-464)||(27747107-27747186)
chr8 (335-385)||(8981126-8981176)
chr8 (380-462)||(18734026-18734107)
chr8 (413-523)||(33214636-33214746)
chr8 (387-464)||(16794305-16794382)
chr8 (360-523)||(17693579-17693739)
chr8 (302-343)||(26469338-26469379)
chr8 (443-523)||(14585721-14585801)
chr8 (384-448)||(39646227-39646291)
[»] chr1 (74 HSPs)
chr1 (288-523)||(47132793-47133028)
chr1 (304-498)||(12635076-12635270)
chr1 (301-516)||(49626816-49627031)
chr1 (287-523)||(44543163-44543397)
chr1 (302-499)||(16161739-16161939)
chr1 (301-519)||(1742187-1742402)
chr1 (264-518)||(36775682-36775938)
chr1 (360-523)||(24582913-24583075)
chr1 (301-480)||(40163507-40163685)
chr1 (310-511)||(41994337-41994540)
chr1 (301-523)||(21947585-21947803)
chr1 (302-523)||(16262768-16262986)
chr1 (301-426)||(32679159-32679285)
chr1 (301-502)||(9341630-9341830)
chr1 (287-478)||(15492184-15492379)
chr1 (301-523)||(7337630-7337848)
chr1 (265-523)||(19060772-19061034)
chr1 (301-523)||(23291609-23291828)
chr1 (301-488)||(34413092-34413276)
chr1 (363-497)||(34528695-34528829)
chr1 (301-523)||(45415466-45415683)
chr1 (289-463)||(8211937-8212107)
chr1 (301-517)||(13144785-13144997)
chr1 (355-518)||(48750138-48750305)
chr1 (301-519)||(35484362-35484576)
chr1 (307-500)||(6217817-6218007)
chr1 (301-420)||(13075703-13075821)
chr1 (354-524)||(31692433-31692602)
chr1 (301-523)||(5983744-5983961)
chr1 (301-387)||(1602022-1602106)
chr1 (385-463)||(39927549-39927627)
chr1 (414-523)||(44915655-44915764)
chr1 (301-523)||(14872547-14872764)
chr1 (387-463)||(34519142-34519218)
chr1 (301-365)||(37720243-37720306)
chr1 (382-523)||(34878245-34878383)
chr1 (301-404)||(35462120-35462222)
chr1 (310-523)||(43412285-43412499)
chr1 (301-412)||(15434950-15435058)
chr1 (301-516)||(32394905-32395116)
chr1 (304-404)||(15836102-15836201)
chr1 (286-516)||(30506146-30506376)
chr1 (354-464)||(5855879-5855989)
chr1 (304-373)||(31918899-31918966)
chr1 (389-463)||(39987401-39987475)
chr1 (301-463)||(11462475-11462632)
chr1 (387-459)||(5701269-5701341)
chr1 (387-463)||(9687199-9687275)
chr1 (387-463)||(9919399-9919475)
chr1 (387-463)||(19715890-19715966)
chr1 (387-463)||(28035149-28035225)
chr1 (387-463)||(35584613-35584689)
chr1 (415-523)||(45789558-45789666)
chr1 (360-441)||(21686838-21686916)
chr1 (303-499)||(27580119-27580310)
chr1 (301-352)||(29738770-29738821)
chr1 (409-518)||(37720121-37720234)
chr1 (385-464)||(44637429-44637508)
chr1 (296-412)||(10776536-10776648)
chr1 (385-463)||(18569305-18569383)
chr1 (360-402)||(27469680-27469722)
chr1 (301-393)||(31984087-31984176)
chr1 (205-251)||(32679334-32679380)
chr1 (413-475)||(40163444-40163506)
chr1 (414-523)||(18939336-18939444)
chr1 (301-402)||(39888099-39888199)
chr1 (387-459)||(7997799-7997871)
chr1 (387-463)||(9172500-9172576)
chr1 (387-463)||(9180482-9180558)
chr1 (387-459)||(31836817-31836889)
chr1 (407-463)||(40646700-40646756)
chr1 (387-455)||(40881015-40881083)
chr1 (387-459)||(50272139-50272211)
chr1 (387-463)||(51868640-51868716)
[»] chr7 (67 HSPs)
chr7 (301-522)||(41553402-41553623)
chr7 (301-520)||(41553749-41553968)
chr7 (301-520)||(41554094-41554313)
chr7 (301-524)||(28476126-28476352)
chr7 (267-523)||(24350806-24351063)
chr7 (308-523)||(38880545-38880761)
chr7 (301-523)||(24069361-24069584)
chr7 (202-523)||(22742745-22743068)
chr7 (301-523)||(9450104-9450322)
chr7 (301-523)||(30756786-30757004)
chr7 (330-523)||(3224378-3224575)
chr7 (301-519)||(3394377-3394596)
chr7 (301-523)||(37837425-37837644)
chr7 (301-519)||(11343703-11343930)
chr7 (287-497)||(1749140-1749343)
chr7 (355-518)||(35132899-35133066)
chr7 (304-523)||(42978518-42978734)
chr7 (301-511)||(34899586-34899792)
chr7 (301-523)||(48316779-48316997)
chr7 (365-488)||(5775172-5775294)
chr7 (287-495)||(26623784-26623989)
chr7 (267-519)||(39328761-39329012)
chr7 (302-523)||(12141275-12141491)
chr7 (301-412)||(47590217-47590327)
chr7 (331-523)||(19296806-19296994)
chr7 (354-424)||(48930724-48930794)
chr7 (360-522)||(8001514-8001673)
chr7 (287-488)||(44311794-44311996)
chr7 (385-464)||(32521921-32522000)
chr7 (301-404)||(38051150-38051253)
chr7 (301-511)||(35665114-35665317)
chr7 (383-464)||(29617726-29617807)
chr7 (310-464)||(969473-969630)
chr7 (306-487)||(39228926-39229102)
chr7 (301-404)||(40993088-40993190)
chr7 (313-498)||(32675380-32675565)
chr7 (301-394)||(13797025-13797117)
chr7 (301-463)||(48061329-48061486)
chr7 (360-464)||(6002000-6002104)
chr7 (301-523)||(39171557-39171776)
chr7 (267-403)||(11653751-11653886)
chr7 (289-523)||(19404724-19404952)
chr7 (360-488)||(22087281-22087406)
chr7 (301-462)||(25067990-25068147)
chr7 (360-499)||(5348583-5348719)
chr7 (387-464)||(31235786-31235863)
chr7 (387-463)||(1448825-1448901)
chr7 (387-463)||(23786581-23786657)
chr7 (362-523)||(38798747-38798905)
chr7 (318-439)||(4121734-4121856)
chr7 (387-463)||(14627874-14627950)
chr7 (390-462)||(19560007-19560079)
chr7 (387-463)||(20116588-20116664)
chr7 (387-459)||(32684674-32684746)
chr7 (387-463)||(35496170-35496246)
chr7 (387-463)||(35667227-35667303)
chr7 (302-369)||(5078513-5078579)
chr7 (387-422)||(26583720-26583755)
chr7 (387-458)||(42067061-42067132)
chr7 (387-459)||(1100763-1100838)
chr7 (360-487)||(9977209-9977333)
chr7 (387-463)||(22927865-22927941)
chr7 (302-334)||(26583644-26583676)
chr7 (387-463)||(34773717-34773793)
chr7 (387-463)||(46339060-46339136)
chr7 (399-463)||(46818411-46818475)
chr7 (387-463)||(46822021-46822097)
[»] chr2 (77 HSPs)
chr2 (209-523)||(29574596-29574910)
chr2 (202-440)||(12647971-12648208)
chr2 (302-523)||(24461351-24461575)
chr2 (301-523)||(32448587-32448808)
chr2 (301-488)||(6358874-6359063)
chr2 (354-523)||(10929627-10929797)
chr2 (302-499)||(3308853-3309053)
chr2 (202-523)||(37994090-37994416)
chr2 (355-523)||(10237184-10237356)
chr2 (287-463)||(43397147-43397320)
chr2 (302-499)||(4904137-4904330)
chr2 (301-523)||(38445080-38445298)
chr2 (301-470)||(14955436-14955608)
chr2 (363-518)||(17249120-17249274)
chr2 (451-523)||(12647077-12647149)
chr2 (301-497)||(4264386-4264578)
chr2 (313-517)||(31210581-31210781)
chr2 (301-399)||(36691788-36691885)
chr2 (360-523)||(1415529-1415689)
chr2 (301-463)||(4099017-4099175)
chr2 (301-523)||(7448161-7448379)
chr2 (301-412)||(4041670-4041780)
chr2 (301-511)||(14423236-14423445)
chr2 (295-519)||(31788364-31788584)
chr2 (301-523)||(9169226-9169443)
chr2 (302-502)||(23933608-23933806)
chr2 (301-441)||(7646387-7646523)
chr2 (301-461)||(11985260-11985416)
chr2 (307-523)||(27097374-27097585)
chr2 (301-523)||(1421589-1421808)
chr2 (289-519)||(30400007-30400235)
chr2 (362-463)||(34128712-34128813)
chr2 (301-523)||(4778667-4778885)
chr2 (301-510)||(6436521-6436726)
chr2 (301-463)||(5427896-5428052)
chr2 (301-519)||(7677845-7678057)
chr2 (301-402)||(29173805-29173905)
chr2 (301-523)||(33923615-33923837)
chr2 (301-463)||(36943149-36943309)
chr2 (306-464)||(35220245-35220398)
chr2 (387-499)||(41694618-41694729)
chr2 (385-463)||(459269-459347)
chr2 (267-409)||(19062431-19062572)
chr2 (384-502)||(28533943-28534061)
chr2 (301-391)||(29279667-29279756)
chr2 (301-523)||(18763381-18763600)
chr2 (289-350)||(19596013-19596073)
chr2 (413-502)||(36175485-36175574)
chr2 (383-500)||(37416702-37416819)
chr2 (385-462)||(37614121-37614198)
chr2 (387-463)||(3725190-3725266)
chr2 (387-463)||(8805876-8805952)
chr2 (387-463)||(27249146-27249222)
chr2 (389-464)||(27949438-27949513)
chr2 (389-463)||(36234020-36234094)
chr2 (387-463)||(9986337-9986413)
chr2 (301-404)||(31128864-31128965)
chr2 (387-463)||(31580584-31580660)
chr2 (387-463)||(34598997-34599073)
chr2 (409-488)||(11812701-11812780)
chr2 (356-459)||(24587687-24587790)
chr2 (355-402)||(25237298-25237345)
chr2 (387-462)||(30420688-30420763)
chr2 (413-523)||(17151445-17151555)
chr2 (201-239)||(18107983-18108021)
chr2 (413-487)||(28871792-28871866)
chr2 (291-352)||(16261268-16261328)
chr2 (310-401)||(16375872-16375960)
chr2 (360-465)||(23903376-23903480)
chr2 (387-463)||(2808467-2808543)
chr2 (387-459)||(7015710-7015782)
chr2 (355-473)||(7443465-7443585)
chr2 (387-489)||(18107749-18107848)
chr2 (389-465)||(18113881-18113957)
chr2 (341-421)||(20145797-20145876)
chr2 (387-463)||(26025405-26025481)
chr2 (301-385)||(28871864-28871948)
[»] chr3 (88 HSPs)
chr3 (301-518)||(29921956-29922173)
chr3 (301-518)||(29971109-29971326)
chr3 (303-519)||(35175304-35175521)
chr3 (303-506)||(12947258-12947464)
chr3 (307-519)||(29239247-29239460)
chr3 (301-502)||(53508124-53508326)
chr3 (301-499)||(51487004-51487207)
chr3 (302-506)||(4821713-4821911)
chr3 (307-523)||(14859396-14859611)
chr3 (301-523)||(36461398-36461616)
chr3 (287-517)||(16235307-16235541)
chr3 (301-497)||(21289807-21290006)
chr3 (202-380)||(50194390-50194567)
chr3 (301-422)||(42460650-42460766)
chr3 (310-497)||(27706219-27706409)
chr3 (307-511)||(53807837-53808045)
chr3 (301-523)||(43488557-43488775)
chr3 (301-517)||(4396307-4396517)
chr3 (301-523)||(6954663-6954881)
chr3 (347-486)||(7546555-7546699)
chr3 (311-523)||(8914618-8914833)
chr3 (308-501)||(44804934-44805129)
chr3 (355-523)||(51923676-51923848)
chr3 (354-478)||(41818164-41818287)
chr3 (301-523)||(47042015-47042237)
chr3 (301-441)||(10108140-10108275)
chr3 (301-441)||(10232974-10233109)
chr3 (348-499)||(32246393-32246544)
chr3 (382-499)||(7805475-7805592)
chr3 (301-463)||(9998371-9998528)
chr3 (302-516)||(20464944-20465154)
chr3 (305-463)||(21533836-21533990)
chr3 (301-523)||(47896055-47896273)
chr3 (384-486)||(29249215-29249317)
chr3 (355-523)||(51303610-51303782)
chr3 (301-458)||(22290841-22290998)
chr3 (301-502)||(10229380-10229576)
chr3 (301-463)||(40487228-40487387)
chr3 (301-523)||(52923084-52923302)
chr3 (444-523)||(628890-628969)
chr3 (331-523)||(32701426-32701612)
chr3 (301-502)||(35864920-35865119)
chr3 (301-517)||(48650707-48650919)
chr3 (302-441)||(9319961-9320096)
chr3 (295-412)||(21431522-21431638)
chr3 (370-487)||(26739360-26739477)
chr3 (301-463)||(38860147-38860304)
chr3 (301-431)||(45568504-45568629)
chr3 (360-440)||(25842634-25842714)
chr3 (289-357)||(33579759-33579827)
chr3 (451-523)||(50194302-50194374)
chr3 (364-463)||(3606738-3606837)
chr3 (409-480)||(52496934-52497005)
chr3 (310-412)||(40556624-40556725)
chr3 (301-463)||(54148892-54149053)
chr3 (387-464)||(22803025-22803102)
chr3 (387-464)||(36906125-36906202)
chr3 (301-432)||(36910699-36910826)
chr3 (360-519)||(38545760-38545916)
chr3 (310-402)||(52116093-52116187)
chr3 (301-463)||(1649323-1649480)
chr3 (301-523)||(9797501-9797714)
chr3 (301-373)||(20987913-20987984)
chr3 (387-459)||(21488094-21488166)
chr3 (387-463)||(35499193-35499269)
chr3 (387-463)||(46934645-46934721)
chr3 (387-463)||(49552219-49552295)
chr3 (385-463)||(36734687-36734765)
chr3 (360-416)||(4019695-4019752)
chr3 (288-431)||(12149843-12149982)
chr3 (202-243)||(29921857-29921898)
chr3 (202-243)||(29971010-29971051)
chr3 (304-409)||(31271885-31271989)
chr3 (413-502)||(48199788-48199877)
chr3 (387-463)||(4178568-4178644)
chr3 (301-412)||(12050723-12050832)
chr3 (387-463)||(12116101-12116177)
chr3 (387-463)||(25162439-25162515)
chr3 (387-463)||(42719520-42719596)
chr3 (387-462)||(32607472-32607547)
chr3 (295-412)||(37040669-37040782)
chr3 (362-441)||(43564758-43564837)
chr3 (310-463)||(44959979-44960128)
chr3 (412-499)||(7887434-7887523)
chr3 (385-463)||(31794072-31794150)
chr3 (301-333)||(7887562-7887594)
chr3 (301-412)||(18010922-18011033)
chr3 (387-463)||(25631521-25631597)
[»] chr5 (57 HSPs)
chr5 (301-523)||(10332515-10332737)
chr5 (301-523)||(28540873-28541098)
chr5 (301-523)||(2979273-2979498)
chr5 (287-518)||(8088184-8088412)
chr5 (301-520)||(24229754-24229970)
chr5 (301-523)||(19103434-19103659)
chr5 (301-523)||(38597700-38597918)
chr5 (301-424)||(39567198-39567320)
chr5 (295-523)||(13007126-13007350)
chr5 (355-523)||(14211176-14211348)
chr5 (354-523)||(35920963-35921132)
chr5 (301-523)||(6012105-6012323)
chr5 (301-523)||(14726428-14726647)
chr5 (295-523)||(9113692-9113916)
chr5 (301-523)||(11976902-11977122)
chr5 (287-523)||(38007245-38007479)
chr5 (288-357)||(8985062-8985132)
chr5 (301-394)||(8096590-8096683)
chr5 (301-409)||(6216802-6216909)
chr5 (428-488)||(31315934-31315994)
chr5 (304-523)||(31391720-31391938)
chr5 (301-441)||(26825334-26825469)
chr5 (360-487)||(35850760-35850884)
chr5 (396-489)||(31364469-31364558)
chr5 (387-462)||(36344487-36344562)
chr5 (376-485)||(19120887-19120995)
chr5 (387-464)||(34881726-34881803)
chr5 (301-519)||(11073871-11074085)
chr5 (387-463)||(41184435-41184511)
chr5 (356-463)||(7613053-7613160)
chr5 (460-523)||(8984922-8984985)
chr5 (383-516)||(13421917-13422047)
chr5 (383-498)||(16758521-16758636)
chr5 (360-434)||(1582147-1582221)
chr5 (360-434)||(1602594-1602668)
chr5 (385-463)||(42886484-42886562)
chr5 (289-412)||(14082448-14082567)
chr5 (301-390)||(15571389-15571477)
chr5 (414-523)||(34945405-34945514)
chr5 (387-463)||(2057833-2057909)
chr5 (410-478)||(41214646-41214714)
chr5 (302-523)||(25980062-25980279)
chr5 (387-458)||(30298216-30298287)
chr5 (301-351)||(7036131-7036181)
chr5 (301-373)||(26878195-26878264)
chr5 (376-464)||(37986139-37986224)
chr5 (202-243)||(8985180-8985221)
chr5 (301-373)||(34945325-34945395)
chr5 (383-464)||(38110974-38111055)
chr5 (453-502)||(39567321-39567370)
chr5 (354-418)||(9591034-9591098)
chr5 (387-463)||(19259807-19259882)
chr5 (387-463)||(26578260-26578336)
chr5 (387-463)||(27266854-27266930)
chr5 (387-463)||(27576345-27576421)
chr5 (287-371)||(41749211-41749295)
chr5 (387-459)||(43261818-43261890)
[»] chr6 (53 HSPs)
chr6 (287-523)||(30493420-30493655)
chr6 (301-518)||(8102624-8102844)
chr6 (302-511)||(32191709-32191916)
chr6 (302-522)||(1933660-1933882)
chr6 (264-500)||(26588462-26588689)
chr6 (301-421)||(30776570-30776689)
chr6 (312-523)||(7976154-7976355)
chr6 (287-488)||(28981067-28981265)
chr6 (376-523)||(31296796-31296943)
chr6 (301-523)||(545928-546154)
chr6 (301-523)||(33053135-33053353)
chr6 (295-523)||(23128517-23128741)
chr6 (267-523)||(3913541-3913794)
chr6 (301-422)||(1523310-1523426)
chr6 (311-523)||(14801735-14801950)
chr6 (383-487)||(22571457-22571562)
chr6 (301-523)||(32327184-32327402)
chr6 (296-488)||(11321471-11321659)
chr6 (360-523)||(31852160-31852315)
chr6 (295-404)||(34018459-34018567)
chr6 (301-522)||(606109-606326)
chr6 (288-498)||(678996-679207)
chr6 (301-441)||(68050-68186)
chr6 (347-484)||(528356-528493)
chr6 (309-523)||(127583-127792)
chr6 (346-498)||(19164657-19164809)
chr6 (387-463)||(25064242-25064318)
chr6 (305-441)||(7515251-7515382)
chr6 (387-462)||(28635117-28635192)
chr6 (396-478)||(34222793-34222876)
chr6 (331-523)||(29319845-29320034)
chr6 (287-412)||(32059798-32059924)
chr6 (360-470)||(34185713-34185823)
chr6 (265-350)||(22571358-22571442)
chr6 (385-458)||(34489254-34489327)
chr6 (387-463)||(23947313-23947389)
chr6 (385-463)||(25337574-25337652)
chr6 (387-463)||(4984562-4984638)
chr6 (387-463)||(8496973-8497049)
chr6 (387-463)||(12652950-12653026)
chr6 (387-463)||(33110617-33110693)
chr6 (354-523)||(3355074-3355240)
chr6 (387-422)||(4088466-4088501)
chr6 (387-462)||(10228685-10228760)
chr6 (413-523)||(12170481-12170591)
chr6 (362-470)||(13546683-13546788)
chr6 (360-416)||(5417155-5417212)
chr6 (360-433)||(31575564-31575637)
chr6 (387-464)||(35001596-35001673)
chr6 (301-373)||(12170400-12170471)
chr6 (264-348)||(14801074-14801158)
chr6 (387-459)||(16419164-16419236)
chr6 (385-421)||(33543657-33543693)
[»] chr4 (92 HSPs)
chr4 (301-519)||(22300768-22300987)
chr4 (264-523)||(52944198-52944453)
chr4 (316-523)||(28857339-28857544)
chr4 (307-497)||(51888204-51888396)
chr4 (301-524)||(9643304-9643531)
chr4 (267-523)||(36204346-36204601)
chr4 (326-518)||(33332541-33332735)
chr4 (267-519)||(36161603-36161849)
chr4 (287-523)||(22038769-22039000)
chr4 (303-502)||(48351174-48351367)
chr4 (301-523)||(9713831-9714054)
chr4 (355-498)||(36194679-36194826)
chr4 (301-523)||(22611107-22611325)
chr4 (344-523)||(6155193-6155370)
chr4 (301-522)||(13634039-13634256)
chr4 (301-523)||(26633638-26633856)
chr4 (301-522)||(32766438-32766655)
chr4 (301-518)||(4142724-4142939)
chr4 (301-517)||(18048809-18049019)
chr4 (301-523)||(21686209-21686426)
chr4 (301-463)||(35348229-35348389)
chr4 (355-499)||(27651914-27652062)
chr4 (303-523)||(2520703-2520921)
chr4 (320-433)||(42032578-42032691)
chr4 (362-502)||(52933931-52934072)
chr4 (360-523)||(53444100-53444260)
chr4 (376-460)||(43853437-43853521)
chr4 (340-487)||(31891290-31891441)
chr4 (301-523)||(53810952-53811170)
chr4 (289-521)||(38166199-38166430)
chr4 (385-462)||(2624512-2624589)
chr4 (305-523)||(19853479-19853693)
chr4 (289-357)||(47158139-47158207)
chr4 (376-499)||(1621495-1621619)
chr4 (301-522)||(24099035-24099255)
chr4 (289-488)||(31359749-31359950)
chr4 (387-464)||(868180-868257)
chr4 (302-440)||(29120413-29120547)
chr4 (310-394)||(33920984-33921067)
chr4 (303-470)||(4937757-4937922)
chr4 (302-409)||(29961002-29961109)
chr4 (369-440)||(37683878-37683949)
chr4 (301-412)||(44596588-44596698)
chr4 (307-421)||(47320460-47320581)
chr4 (301-419)||(35395741-35395861)
chr4 (398-463)||(44947441-44947506)
chr4 (387-464)||(53616644-53616721)
chr4 (301-519)||(54021785-54021998)
chr4 (387-463)||(4643876-4643952)
chr4 (302-440)||(17949374-17949508)
chr4 (302-440)||(17953226-17953360)
chr4 (301-404)||(22558548-22558649)
chr4 (387-463)||(25273901-25273977)
chr4 (301-501)||(37030187-37030381)
chr4 (387-463)||(47417680-47417756)
chr4 (302-394)||(52978749-52978839)
chr4 (301-412)||(5119263-5119373)
chr4 (387-458)||(21090170-21090241)
chr4 (387-462)||(29965653-29965728)
chr4 (387-462)||(51318003-51318078)
chr4 (360-488)||(12199695-12199820)
chr4 (385-463)||(35964970-35965048)
chr4 (328-464)||(7393217-7393354)
chr4 (387-464)||(12265473-12265549)
chr4 (380-499)||(18935777-18935900)
chr4 (363-404)||(49072811-49072852)
chr4 (387-463)||(9528872-9528948)
chr4 (387-463)||(10359542-10359618)
chr4 (387-459)||(10389753-10389825)
chr4 (328-404)||(11300074-11300150)
chr4 (409-501)||(37465511-37465603)
chr4 (387-463)||(43154009-43154085)
chr4 (301-441)||(43510123-43510257)
chr4 (387-463)||(49410241-49410317)
chr4 (301-412)||(56040721-56040829)
chr4 (409-488)||(2069582-2069661)
chr4 (301-348)||(9634598-9634645)
chr4 (271-326)||(28857272-28857327)
chr4 (396-463)||(50766507-50766574)
chr4 (385-463)||(18138908-18138986)
chr4 (385-463)||(49126121-49126199)
chr4 (307-421)||(14121784-14121900)
chr4 (360-465)||(21365089-21365193)
chr4 (302-347)||(37188694-37188739)
chr4 (301-402)||(40066140-40066240)
chr4 (387-463)||(9283929-9284005)
chr4 (385-421)||(9645586-9645622)
chr4 (427-515)||(22806588-22806676)
chr4 (301-333)||(33332756-33332788)
chr4 (387-463)||(38706705-38706781)
chr4 (387-463)||(43444411-43444487)
chr4 (387-463)||(56194619-56194695)
[»] scaffold0009 (1 HSPs)
scaffold0009 (202-523)||(58055-58363)
[»] scaffold0347 (1 HSPs)
scaffold0347 (360-523)||(5989-6152)
[»] scaffold0039 (1 HSPs)
scaffold0039 (301-518)||(93003-93224)
[»] scaffold0042 (1 HSPs)
scaffold0042 (322-523)||(92463-92664)
[»] scaffold0017 (1 HSPs)
scaffold0017 (301-523)||(32714-32933)
[»] scaffold0888 (1 HSPs)
scaffold0888 (355-499)||(1669-1817)
[»] scaffold0445 (1 HSPs)
scaffold0445 (301-485)||(1247-1428)
[»] scaffold0127 (1 HSPs)
scaffold0127 (301-523)||(15395-15614)
[»] scaffold0136 (2 HSPs)
scaffold0136 (289-463)||(10069-10238)
scaffold0136 (301-393)||(37950-38040)
[»] scaffold0026 (1 HSPs)
scaffold0026 (301-523)||(71831-72049)
[»] scaffold0088 (1 HSPs)
scaffold0088 (301-393)||(50690-50781)
[»] scaffold0113 (1 HSPs)
scaffold0113 (383-462)||(36683-36762)
[»] scaffold0426 (1 HSPs)
scaffold0426 (387-463)||(6311-6387)
[»] scaffold0603 (1 HSPs)
scaffold0603 (301-404)||(7619-7722)
[»] scaffold0095 (1 HSPs)
scaffold0095 (410-488)||(9396-9474)
[»] scaffold0884 (1 HSPs)
scaffold0884 (301-463)||(2000-2156)
[»] scaffold0634 (1 HSPs)
scaffold0634 (288-431)||(8403-8542)
[»] scaffold0495 (1 HSPs)
scaffold0495 (387-462)||(5404-5479)
[»] scaffold0014 (1 HSPs)
scaffold0014 (387-458)||(201372-201443)
[»] scaffold0262 (1 HSPs)
scaffold0262 (301-374)||(1932-2003)
[»] scaffold0002 (1 HSPs)
scaffold0002 (385-463)||(453936-454014)
[»] scaffold0372 (1 HSPs)
scaffold0372 (360-465)||(9613-9717)
[»] scaffold0015 (1 HSPs)
scaffold0015 (409-470)||(4072-4133)
[»] scaffold0064 (1 HSPs)
scaffold0064 (443-511)||(19053-19121)


Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 110 - 524
Target Start/End: Original strand, 3240090 - 3240505
Alignment:
Q  110 tcactaacatacaacaactgaaaaaatgcatttgcatttaaaatttgaacgtaagcattcatcacagctctctacaattctttaccaacaatttctctct 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| |||||    
T  3240090 tcactaacatacaacaactgaaaaaatgcatttgcatttaaaatttgaacgtaagcaatcaacacagctctctacaattctttaccaagaatttttctct 3240189  T
Q  210 aagttttctttctctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtat-tcttttttcatttcctttcaat 308  Q
    |||||||||||||||| | |||||||||||||||   |||||| |||        ||||||||||||||||| | || | ||||||||||||||||||||    
T  3240190 aagttttctttctcttccggtcgttgaggaggggtgattttaggtcattttttttatctagaatcacccatctgcatcttttttttcatttcctttcaat 3240289  T
Q  309 ctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacgg 408  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||| |  | ||||||||||| ||||||||||||     
T  3240290 ctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgtgtacatcattgtgttgttcgtcgtcttgtacga 3240389  T
Q  409 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatg 508  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||    
T  3240390 cgttgtttgatttcgcgtgttgttgtggtgtttgtttggttaatattgaaagatcggcttcagtcaatcacatattcaatcgatgatttggacgccaatg 3240489  T
Q  509 ttgtagatccggaagt 524  Q
    ||| |||||| |||||    
T  3240490 ttgcagatccagaagt 3240505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 301 - 518
Target Start/End: Complemental strand, 18890889 - 18890669
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||| || ||  ||||||| ||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||| |||||    
T  18890889 ctttcaatctaaataagtgattttcacatgcatcaagt-ttttcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc 18890791  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgt----tgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 496  Q
    |||| || |||||||||||||||| |||| |    |||||||||  |||||||  |||||||||||||||||||  |||||||| |||||||  ||||||    
T  18890790 ttgtgcgacgttgtttgatttcgcattttttgttgtgtggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatt 18890691  T
Q  497 tggacgccaatgttgtagatcc 518  Q
    ||| || ||| |||| ||||||    
T  18890690 tgggcgtcaacgttgcagatcc 18890669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 301 - 477
Target Start/End: Complemental strand, 24099446 - 24099266
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatt----ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcat 396  Q
    ||||| || ||||||||||||||||| ||| ||||||||||||||||| ||| ||    ||| ||||||||||||||| ||||||||||||||||||| |    
T  24099446 ctttcgatttaaataagtgatttccacatagatcaagtgttttcttttttgttttattcttcgtgatttcgtcgtctgagtgcgacgttgtgttgttcgt 24099347  T
Q  397 cgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatc 477  Q
    |||| ||||| ||||||||||||||||| | |||||| |||||| |||||||| ||||||||| |||||||||| ||||||    
T  24099346 cgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcatattgaaaaatcagcttcagtcaatc 24099266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 307 - 523
Target Start/End: Complemental strand, 1239581 - 1239362
Alignment:
Q  307 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcat----gatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 402  Q
    ||||||||||||||||| || | |||||| |||||||||||||||| ||||  |    |||||||||||||  ||||||| |||||||||||||||||||    
T  1239581 atctaaataagtgattttcacaaatatcaggtgttttcttttgtgtttttttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcatcgtctt 1239482  T
Q  403 gtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacg 502  Q
    || |||||||||||||||| || | |||||| |||| ||  |||||| |||||||||||||| ||||| |||||||||||||||||  ||||| ||||||    
T  1239481 gtgcggcgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatcaacttcagtcaatcacatattcaatcaatgatctggacg 1239383  T
Q  503 ccaatgttgtagatccggaag 523  Q
     ||| |||| |||||| ||||    
T  1239382 tcaacgttgcagatccagaag 1239362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 8443704 - 8443476
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttc-------atgatttcgtcgtctgtgtgcgacgttgtgttgtt 393  Q
    ||||| |||||||||||||||||||| ||||||| || |||||||||||||| ||||        |||||||||||||||  |||||  |||||||||||    
T  8443704 ctttcgatctaaataagtgatttccacatatatccag-gttttcttttgtgttttttttttttttatgatttcgtcgtctaagtgcggtgttgtgttgtt 8443606  T
Q  394 catcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatg 493  Q
    | ||||||||| ||||||||||||||| ||||| ||||||  |||||  ||||||| |  ||||||||||| ||||| |||||||||||||||||  |||    
T  8443605 cgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggttcaatttgaaagatcaacttcagtcaatcacatattcaatcaatg 8443506  T
Q  494 atttggacgccaatgttgtagatccggaag 523  Q
    ||||||||  ||| |||| |||||||||||    
T  8443505 atttggacatcaacgttgcagatccggaag 8443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 301 - 497
Target Start/End: Original strand, 41896416 - 41896615
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||| || ||  ||||||| |||||||| |||| ||||| ||||||| ||||||  || |||||||||||||||  |||||    
T  41896416 ctttcaatctaaataagtgattttcacatccatcaagt-ttttctttcgtgttttttcgtgatttcatcgtcttagtacgacgttgtgttgttggtcgtc 41896514  T
Q  401 ttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 496  Q
    |||| ||||||||||||||||| |   |||||||||  ||||||  |||||||  |||||||||||||||||||  |||||||| |||||||| ||||||    
T  41896515 ttgtgcggcgttgtttgatttcacatattttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaattaatgatt 41896614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 306 - 523
Target Start/End: Original strand, 5333337 - 5333553
Alignment:
Q  306 aatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgta 405  Q
    |||| ||| |||||||||  | ||||||||||| || | |||||| | |||||| ||||||||| |||| |||||  |||||||||||| |||||||||     
T  5333337 aatcaaaacaagtgatttatacatatatcaagttttat-ttttgtattttttcaagatttcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtg 5333435  T
Q  406 cggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcca 505  Q
    ||| |||||||||||| |||| |||||  ||||||  |||||||  ||||||||||||| ||||| |||||||||||||||||  || |||||| || ||    
T  5333436 cggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaaagatcaacttcagtcaatcacatattcaatcaattatttgggcgtca 5333535  T
Q  506 atgttgtagatccggaag 523  Q
    | ||||||||||| ||||    
T  5333536 acgttgtagatccagaag 5333553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 340 - 523
Target Start/End: Original strand, 39657391 - 39657578
Alignment:
Q  340 ttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc--gttttgttgt--g 435  Q
    |||||||| |||| ||||| ||||||||||||||  |||||||||||| |||||| ||||||||| |||||||||||||||||||   |||||||||  |    
T  39657391 ttttctttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtattgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcg 39657490  T
Q  436 gtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    |||||  |||||||  ||||||||||| |||||||  |||||| | |||||||  |||||||||||| ||| |||| |||||| ||||    
T  39657491 gtgttcgtttggttcgtattgaaagattagcttcagacaatcataaattcaatcaatgatttggacgtcaacgttgcagatccagaag 39657578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 307 - 523
Target Start/End: Original strand, 15344217 - 15344432
Alignment:
Q  307 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 406  Q
    ||||||||||||||||| || | |||||||| |||||||||||||  ||||  | |||| |||||||  |||| || ||||||||||| ||||||||| |    
T  15344217 atctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttttgtaattttgtcgtctaagtgcaaccttgtgttgttcgtcgtcttgtgc 15344316  T
Q  407 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 506  Q
    ||||| |||||||||  | | |||||| |||| ||  |||||| ||||||||||||||  |||| ||||||||| |||||||  |||||||||||| |||    
T  15344317 ggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaa 15344415  T
Q  507 tgttgtagatccggaag 523  Q
     |||| |||||| ||||    
T  15344416 cgttgcagatccagaag 15344432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 307 - 523
Target Start/End: Original strand, 15433282 - 15433497
Alignment:
Q  307 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 406  Q
    ||||||||||||||||| || | |||||||| |||||||||||||  ||||  | |||| |||||||  |||| || ||||||||||| ||||||||| |    
T  15433282 atctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttttgtaattttgtcgtctaagtgcaaccttgtgttgttcgtcgtcttgtgc 15433381  T
Q  407 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 506  Q
    ||||| |||||||||  | | |||||| |||| ||  |||||| ||||||||||||||  |||| ||||||||| |||||||  |||||||||||| |||    
T  15433382 ggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaa 15433480  T
Q  507 tgttgtagatccggaag 523  Q
     |||| |||||| ||||    
T  15433481 cgttgcagatccagaag 15433497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 307 - 523
Target Start/End: Original strand, 15524586 - 15524801
Alignment:
Q  307 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 406  Q
    ||||||||||||||||| || | |||||||| |||||||||||||  ||||  | |||| |||||||  |||| || ||||||||||| ||||||||| |    
T  15524586 atctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttttgtaattttgtcgtctaagtgcaaccttgtgttgttcgtcgtcttgtgc 15524685  T
Q  407 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 506  Q
    ||||| |||||||||  | | |||||| |||| ||  |||||| ||||||||||||||  |||| ||||||||| |||||||  |||||||||||| |||    
T  15524686 ggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaa 15524784  T
Q  507 tgttgtagatccggaag 523  Q
     |||| |||||| ||||    
T  15524785 cgttgcagatccagaag 15524801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 360 - 523
Target Start/End: Complemental strand, 1236824 - 1236662
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||  ||||||| ||||||||||| | ||||||| |||||||||||||||| || | |||||| |||| ||  |||||| |||||||||    
T  1236824 tgatttcgtcgtctaagtgcgaccttgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaa 1236726  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||||| ||||| |||||||||||||||||  ||||| |||||| ||| |||| |||||| ||||    
T  1236725 gatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaag 1236662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 383 - 518
Target Start/End: Complemental strand, 29617379 - 29617244
Alignment:
Q  383 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacata 482  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||| ||||||  |||||||  |||||||||| || ||||| ||||||||| |    
T  29617379 gttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaagaccaacttcagtcaatcacaga 29617280  T
Q  483 ttcaattgatgatttggacgccaatgttgtagatcc 518  Q
    ||||||  |||||||||||| ||| |||| ||||||    
T  29617279 ttcaatcaatgatttggacgtcaacgttgcagatcc 29617244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 301 - 415
Target Start/End: Original strand, 14585605 - 14585718
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||| || ||| ||||||| |||||||| |||| ||||| ||||||||||||||  | ||||||||||||||||| |||||    
T  14585605 ctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcttgatttcgtcgtcttagcgcgacgttgtgttgttcgtcgtc 14585703  T
Q  401 ttgtacggcgttgtt 415  Q
    |||| ||||||||||    
T  14585704 ttgtgcggcgttgtt 14585718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 406 - 523
Target Start/End: Original strand, 8981170 - 8981287
Alignment:
Q  406 cggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcca 505  Q
    ||||||| ||||||||||||| |||||| ||||||  |||| || |||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||    
T  8981170 cggcgttttttgatttcgcgtcttgttgcggtgttcgtttgtttgatattgaaagatcagcgtcagtcaatcacagattcaattgatgatttggacgtca 8981269  T
Q  506 atgttgtagatccggaag 523  Q
    | |||  |||||||||||    
T  8981270 acgttacagatccggaag 8981287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 360 - 523
Target Start/End: Complemental strand, 14916315 - 14916152
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||| ||||| ||||| ||||| | || | |||| ||||  |||||||||||  || |||||| ||||||  ||||||| |||||||||    
T  14916315 tgatttcgtcgtctgggtgcggcgttgcgttgtccgtccttttgtgcggcactgtttgatttcatgtcttgttgcggtgttcgtttggttcatattgaaa 14916216  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    || || ||||||||||||| | |||||||  |||||||||||| | |||||| |||||||||||    
T  14916215 gaccaacttcaatcaatcagagattcaatcaatgatttggacgtccatgttgcagatccggaag 14916152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 302 - 499
Target Start/End: Original strand, 8826116 - 8826311
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||| |||||||||||||||||  | | ||||||||| ||||||||||| | ||||| ||||||||||||||| ||||  |||| |||||||| ||||||    
T  8826116 tttcgatctaaataagtgatttttacacatatcaagttttttcttttgttt-ttttcgtgatttcgtcgtctgagtgcagcgttatgttgttcgtcgtct 8826214  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    |||  |||||||| ||| |||| || |||||| |||| || |||| || ||||||||| |||| ||||||| |||||   |||||||  |||||||||    
T  8826215 tgtgtggcgttgtgtgaattcgtgtcttgttgcggtg-ttctttgattcatattgaaatatcaacttcaatgaatcatcgattcaatcaatgatttgg 8826311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 23230550 - 23230767
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| ||||| |||||||| ||||||||||||  ||||  ||||||||||||||  ||||| || | |||||||| |||||    
T  23230550 ctttcaatctaaataagtggttttcatatctatcaagttttttcttttgtg--tttttgtgatttcgtcgtctaagtgcggcgatttgttgttcgtcgtc 23230647  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   |||||||||||||| |||| | ||||||| ||| |||  ||||| ||||||  | ||| ||||| ||| ||||||   |||| ||||     
T  23230648 ttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattacaaattcaaccaatgacttggg 23230744  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  23230745 cgtcaacgttgcagatccggaag 23230767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 7883423 - 7883206
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||| ||||  |||||||||| |||  ||||| ||||||||||||| |||||    
T  7883423 ctttcaatctaaataagtggttttcacatctatcaagt-ttttcttttgtgttttttg-tgatttcgtcatctaagtgcggcgttgtgttgttcgtcgtc 7883326  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   |||||||||| ||| |||| | ||||||| ||  ||| |||||||||||||  | | ||||||| ||| ||||||   || |||||||    
T  7883325 ttgtgcggc---gtttgatttcacgtcttgtcgcggtgtttgttcagttcatattgaaagatctacattaatcaattacaaattcaagcaataatttgga 7883229  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||  |||| |||||||||||    
T  7883228 cgtcagcgttgcagatccggaag 7883206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 407 - 523
Target Start/End: Original strand, 21237798 - 21237914
Alignment:
Q  407 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 506  Q
    |||||||||||| ||||||| ||||||  |||||  ||||||| ||||||||||| ||| ||||||||||| ||||||||||  |||||||||||| |||    
T  21237798 ggcgttgtttgacttcgcgtcttgttgcagtgttcgtttggttcatattgaaagaccagtttcaatcaatcccatattcaatcaatgatttggacgtcaa 21237897  T
Q  507 tgttgtagatccggaag 523  Q
    ||||| |||||| ||||    
T  21237898 tgttgcagatccagaag 21237914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 523
Target Start/End: Complemental strand, 45445994 - 45445776
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    ||||||| ||| |||||| ||| || | ||||||||| ||||||||| | | ||||  ||||||||||||||  || ||||||||| |||||| ||||||    
T  45445994 tttcaatttaattaagtggttttcacacatatcaagttttttcttttttttgtttttttgatttcgtcgtctaagtacgacgttgtattgttcgtcgtct 45445895  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
    ||| ||||   |||||||||||| |||||| | ||||||| |||  ||  |||||||||||| || ||| ||||| ||| ||||||   ||||||||| |    
T  45445894 tgtgcggc---gtttgatttcgcattttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggc 45445798  T
Q  502 gccaatgttgtagatccggaag 523  Q
    | ||| |||| | |||||||||    
T  45445797 gtcaacgttgaaaatccggaag 45445776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 287 - 488
Target Start/End: Complemental strand, 20227483 - 20227281
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattt--tcatgatttcgtcgtctgtgtgcgacgt 384  Q
    |||||||||  || ||||||||||||||||||| |||||| ||||| |||   ||||| | ||| | |||  || ||||||| ||||||| ||||| |||    
T  20227483 tcttttttctctttctttcaatctaaataagtggtttccacatataccaaactttttcctgtgtttttttcttcgtgatttcatcgtctgagtgcgtcgt 20227384  T
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatatt 484  Q
    ||| |||||| ||||||| | || |||||||||||||| | ||||||||| || ||| |||||||  |||| ||||||| |||| | ||||| ||| |||    
T  20227383 tgtattgttcgtcgtcttctgcgacgttgtttgatttcacattttgttgt-gtatttgtttggtttctattaaaagatcggcttaagtcaattacaaatt 20227285  T
Q  485 caat 488  Q
    ||||    
T  20227284 caat 20227281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 36532906 - 36532986
Alignment:
Q  383 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||||| ||||||||| ||| ||||||||||||| | ||||||| ||||||||||||||||  ||||||||||||    
T  36532906 gttgtgttgttcgtcgtcttgtgcggtgttgtttgatttctcattttgttttggtgtttatttggttcctattgaaagatc 36532986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 360 - 522
Target Start/End: Original strand, 37971247 - 37971406
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||  ||||| |||| |||||||| ||||||||| |||||||   ||||||||| |||| | ||||||||| ||  |||  ||||||||    
T  37971247 tgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgctttttttcgtggtgtttgttcagttcctattgaaa 37971343  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaa 522  Q
    ||||  | ||||||||| ||| ||||||   |||||||||||| ||| |||| ||||||||||    
T  37971344 gatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaa 37971406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 523
Target Start/End: Complemental strand, 471333 - 471131
Alignment:
Q  318 tgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttg 417  Q
    ||||||||  || |||||||| ||||||||| ||| |||||||||||| ||||||   ||||| || |||||||||| |||||| ||   |||  |||||    
T  471333 tgatttcctcatgtatcaagttttttcttttatgttttttcatgattttgtcgtccaagtgcggcgctgtgttgttcgtcgtctggt---gcgacgtttg 471237  T
Q  418 atttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatc 517  Q
    |||| | || |||||| |||| |  |||||||  ||||||||||||| ||||| ||||||| | |||||||  ||||||||  || ||| |||| |||||    
T  471236 attttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgcagatc 471137  T
Q  518 cggaag 523  Q
    ||||||    
T  471136 cggaag 471131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 499
Target Start/End: Complemental strand, 27498553 - 27498354
Alignment:
Q  295 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 394  Q
    ||||| |||||||| ||||||||||||||  | ||||||||||| ||| ||||| ||||||||  | ||||||||||||  ||| | | |||||||||||    
T  27498553 cattttctttcaatttaaataagtgatttttacatatatcaagtttttccttttatgtatttt-gtaatttcgtcgtctaagtgtgccattgtgttgttc 27498455  T
Q  395 atcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatga 494  Q
     |||||||||   |||   ||||||||||||| |||| |||||||| ||||  ||  ||||||||||||| ||||| | | | ||| |||||||| ||||    
T  27498454 gtcgtcttgt---gcgacatttgatttcgcgtcttgtcgtggtgttcatttaattcctattgaaagatcaacttcagttagt-acaaattcaattaatga 27498359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 321 - 462
Target Start/End: Complemental strand, 24419342 - 24419202
Alignment:
Q  321 tttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatt 420  Q
    |||||| ||||||||| | |||||||||||||  |||  | ||||| ||||||| ||||| ||||||||| ||| |||| ||||  | | ||||||||||    
T  24419342 tttccacatatatcaaattttttcttttgtgttgtttg-taatttcttcgtctgagtgcggcgttgtgtttttcgtcgtattgtgagacattgtttgatt 24419244  T
Q  421 tcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    ||| |||| |||||| |||| |||||||| ||||||||||||    
T  24419243 tcgtgtttggttgtgatgttcatttggttcatattgaaagat 24419202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 464
Target Start/End: Original strand, 28239846 - 28239923
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||| ||||||||| ||||||||||||||| | ||| |||||| |||||| ||||| |||||||||||||||||    
T  28239846 tgttgttcgtcgtcttgtgcggcgttgtttgattcctcgtattgttgcggtgttcatttgattaatattgaaagatca 28239923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 20553429 - 20553206
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcat----gatttcgtcgtctgtgtgcgacgttgtgttgttcat 396  Q
    ||||||||||||||||||||||| || || ||| |||| ||| ||||||||| ||||  |    |||||||||||||  ||||| |||| |||||||| |    
T  20553429 ctttcaatctaaataagtgattttcacatctatgaagtttttccttttgtgtttttttttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgt 20553330  T
Q  397 cgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 496  Q
    |||||| | ||||   ||||||||| | || |||| | ||||||| ||  |||  ||||||||||||    ||||||||| ||| ||||||   ||||||    
T  20553329 cgtcttatgcggc---gtttgattttgtgtcttgtcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatt 20553233  T
Q  497 tggacgccaatgttgtagatccggaag 523  Q
    |||||| ||| |||| |||||||||||    
T  20553232 tggacgtcaacgttgcagatccggaag 20553206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 40211488 - 40211267
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtg--tattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcg 398  Q
    ||||||||||||||||| | ||| || || |||||||| ||||||||||||  | ||||  ||||||||||||||   || | ||||||||||||| |||    
T  40211488 ctttcaatctaaataagcggttttcacatctatcaagtattttcttttgtgtttttttttgtgatttcgtcgtctaaatgtggcgttgtgttgttcgtcg 40211389  T
Q  399 tcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 498  Q
    |||| |   ||  ||||||||||||||| |||| | ||||||| ||| |||  ||||||||||||  | ||| || || ||| |||| |   ||||||||    
T  40211388 tcttat---gcagtgtttgatttcgcgtattgtcgcggtgtttgtttagtttctattgaaagatctacatcagtcgattacaaattccaccaatgatttg 40211292  T
Q  499 gacgccaatgttgtagatccggaag 523  Q
    | || ||| ||||||||||||||||    
T  40211291 ggcgtcaacgttgtagatccggaag 40211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 523
Target Start/End: Original strand, 10377625 - 10377813
Alignment:
Q  331 tatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttg 430  Q
    |||||||| ||| | ||||||| ||||  ||||||||| ||||  ||||| |||||||||||||  |||||||| |||||||   |||||||||||||||    
T  10377625 tatcaagtttttccctttgtgttttttg-tgatttcgttgtctaagtgcggcgttgtgttgttcgccgtcttgtgcggcgtt---tgatttcgcgttttg 10377720  T
Q  431 ttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    | ||||||||| ||  |||  ||||||||||||  | ||| ||||| | | ||||||   |||||||||||  ||| |||| |||||||||||    
T  10377721 tcgtggtgtttgttcagttcctattgaaagatctacatcagtcaattataaattcaaccaatgatttggacatcaacgttgcagatccggaag 10377813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 21237702 - 21237752
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgt 352  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  21237702 tttcaatctaaataagtgatttccaaatatatcaagtgttttcctttgtgt 21237752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 20559929 - 20559709
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgt-gtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||||||||||||||||||||| || || |||||||| ||| |||||||  | ||||  ||||||||||||||  ||||  |||| |||||||| ||||    
T  20559929 ctttcaatctaaataagtgattttcacatctatcaagtttttccttttgtattttttttgtgatttcgtcgtctaagtgcatcgttttgttgttcgtcgt 20559830  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    ||||| ||||    |||||||| | || |||  | ||||||| ||  |||  ||||||||||||    ||||||||| ||| ||||||   |||||||||    
T  20559829 cttgtgcggc---ctttgattttgtgtcttggcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatttgg 20559733  T
Q  500 acgccaatgttgtagatccggaag 523  Q
    ||| ||| |||| |||||||||||    
T  20559732 acgtcaacgttgcagatccggaag 20559709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 20571491 - 20571271
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgt-gtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||||||||||||||||||||| || || |||||||| ||| |||||||  | ||||  ||||||||||||||  ||||  |||| |||||||| ||||    
T  20571491 ctttcaatctaaataagtgattttcacatctatcaagtttttccttttgtattttttttgtgatttcgtcgtctaagtgcatcgttttgttgttcgtcgt 20571392  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    ||||| ||||    |||||||| | || |||  | ||||||| ||  |||  ||||||||||||    ||||||||| ||| ||||||   |||||||||    
T  20571391 cttgtgcggc---ctttgattttgtgtcttggcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatttgg 20571295  T
Q  500 acgccaatgttgtagatccggaag 523  Q
    ||| ||| |||| |||||||||||    
T  20571294 acgtcaacgttgcagatccggaag 20571271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 418
Target Start/End: Original strand, 34492973 - 34493084
Alignment:
Q  308 tctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttc--gtcgtctgtgtgcgacgttgtgttgttcatcgtcttgta 405  Q
    ||||||||||||||||| | || |||||||| |||||| |||| | |||||||||||||  |||||| | ||||||||||||||||||| | ||| |||     
T  34492973 tctaaataagtgatttctacat-tatcaagttttttctattgtattttttcatgatttctggtcgtcagagtgcgacgttgtgttgttcgttgtcatgtg 34493071  T
Q  406 cggcgttgtttga 418  Q
    ||| |||||||||    
T  34493072 cggtgttgtttga 34493084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 464
Target Start/End: Complemental strand, 44100005 - 44099928
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||| ||||||||| ||||||||||||||||| ||| || ||| |||||| ||||| || ||||||||||||||    
T  44100005 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaagatca 44099928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 40619253 - 40619154
Alignment:
Q  304 tcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttg 403  Q
    |||||||||||||||||||| || ||||||||||| |||  |||||||| ||||  ||||||| ||||||  ||||| ||||||||||||  ||||||||    
T  40619253 tcaatctaaataagtgattttcacatatatcaagtttttctttttgtgt-tttttgtgatttcatcgtctaagtgcggcgttgtgttgtttgtcgtcttg 40619155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 289 - 441
Target Start/End: Complemental strand, 36948633 - 36948484
Alignment:
Q  289 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtg 388  Q
    |||| |||||| ||||||||||||||||||| ||| |||||||||||| | ||| ||||||||| ||||  |  |||| ||||||  |||   |||||||    
T  36948633 ttttctcattttctttcaatctaaataagtggttttcatatatatcaaatttttccttttgtgttttttttttgtttcatcgtctaagtgttgcgttgtg 36948534  T
Q  389 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 441  Q
    |||||  ||||| ||| ||||   |||||||||||||| |||| | |||||||    
T  36948533 ttgtttgtcgtcctgtgcggc---gtttgatttcgcgtcttgtcgcggtgttt 36948484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 14545085 - 14544868
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || |||||||||   ||| ||||  ||||||||  ||||||||||||||   |||| |||||| |||||  |||||    
T  14545085 ctttcaatctaaataagtggttttcacatatatcaaaattttccttt--tgtatttttgtgatttcgtcgtctaattgcggcgttgttttgttagtcgtc 14544988  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||  |||   |||||||||| ||| |||| | |||||| |||| |||  ||||||||||||  | ||||||||| |||  || |||  || ||||||     
T  14544987 ttgtgtggc---gtttgatttcacgtcttgtcgcggtgttcatttagttcctattgaaagatcgacatcaatcaattacaagttaaatcaattatttggg 14544891  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  14544890 cgtcaacgttgcagatccggaag 14544868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 523
Target Start/End: Complemental strand, 16247348 - 16247188
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||| ||||||  ||||| |||||||||||||||||||||||   |||  |||||||||| ||| |||| | ||||||  ||| |||  ||| ||||    
T  16247348 tgatttcttcgtctaagtgcggcgttgtgttgttcatcgtcttgt---gcgacgtttgatttcacgtcttgtcgcggtgttcgtttagttcctatggaaa 16247252  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||||  | ||||| ||| ||| |||||||  ||||||||| |  |||||||| |||||||||||    
T  16247251 gatcgacatcaattaattacaaattcaatcaatgatttgggcatcaatgttgcagatccggaag 16247188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 357
Target Start/End: Complemental strand, 24186858 - 24186786
Alignment:
Q  287 tcttttttcat--ttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt 357  Q
    |||||||||||  || |||| |||||||||||||||||| |||||||||||||| ||| ||||||||| ||||    
T  24186858 tcttttttcatcttttctttaaatctaaataagtgattttcatatatatcaagtttttgcttttgtgtgtttt 24186786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 33342448 - 33342521
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 458  Q
    |||||||||| ||||||| | ||||||| ||||||||| ||| |||||| |||||||||||| || ||||||||    
T  33342448 tgtgttgttcttcgtcttatgcggcgttttttgatttcccgtattgttgcggtgtttatttgattcatattgaa 33342521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 9619428 - 9619352
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  9619428 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9619352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 523
Target Start/End: Original strand, 42046265 - 42046345
Alignment:
Q  443 tttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    |||||||  |||||||||||||||||||  |||||||| |||||||  ||||||||| || |||||||| |||||| ||||    
T  42046265 tttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatgttgcagatccagaag 42046345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 43192417 - 43192341
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||  ||| || |||||||||| ||||| || || ||||||||||    
T  43192417 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaaagatc 43192341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 458
Target Start/End: Original strand, 19876224 - 19876295
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 458  Q
    |||||||| ||||||||| ||||||||||||||| | ||| || |||||||||| ||||| || ||||||||    
T  19876224 tgttgttcgtcgtcttgtgcggcgttgtttgattccccgtcttcttgtggtgttcatttgattcatattgaa 19876295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 422
Target Start/End: Complemental strand, 43834183 - 43834063
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtg-tattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||||||||||||||||||| |||| ||||||||||||  | |||||||| | ||||| | ||||| ||||||  ||||  |||||||||||||  |||    
T  43834183 ctttcaatctaaataagtgatatccacatatatcaagtg--tccttttgtgtttttttcgtaatttcatcgtctaagtgccgcgttgtgttgttccccgt 43834086  T
Q  400 cttgtacggcgttgtttgatttc 422  Q
    |||||  ||| || |||||||||    
T  43834085 cttgtgtggcattttttgatttc 43834063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 463
Target Start/End: Original strand, 3673350 - 3673505
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||  || |||||   ||||||| ||||||| | ||||  ||||||||||||||  |||||  |||||||||||| |||||    
T  3673350 ctttcaatctaaataagtggttatcacatata---agtgtttccttttgt-tctttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtc 3673445  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    || |   ||| |||||||||||| || |||||| ||||||  ||| |||  ||||||||||||    
T  3673446 ttat---gcggtgtttgatttcgtgtcttgttgcggtgttcctttagttcctattgaaagatc 3673505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 478
Target Start/End: Original strand, 34609794 - 34609911
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||  ||||| ||||| ||||||| ||||||||| || |||| |||||||| | || |||||| ||||||  ||| |||   |||||||    
T  34609794 tgatttcgtcgtctaagtgcggcgttgggttgttcctcgtcttgtgcgacgttatttgattttgtgtcttgttgcggtgttcgttt-gtttccattgaaa 34609892  T
Q  460 gatcagcttcaatcaatca 478  Q
    ||||| ||||| |||||||    
T  34609893 gatcaacttcagtcaatca 34609911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 488
Target Start/End: Original strand, 39450552 - 39450630
Alignment:
Q  410 gttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 488  Q
    ||||||||||||  |||||| ||||||||||  |||||||| | ||||||||||| ||| | ||||| |||||||||||    
T  39450552 gttgtttgattttccgttttattgtggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaat 39450630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 2655883 - 2655959
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| | ||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  2655883 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 2655959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 4808977 - 4809053
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  || |||||| ||||| || |||||||||||||    
T  4808977 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 4809053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 11464184 - 11464260
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| |||||||||||||||||  || ||  || |||||| ||||| || |||||||||||||    
T  11464184 tgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgattcatattgaaagatc 11464260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 476
Target Start/End: Complemental strand, 25191170 - 25191079
Alignment:
Q  382 cgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaat 476  Q
    ||||||||||||| ||||||||| |||||||   ||||||||| |||||| | ||||||| |||  ||  ||||||||||||||| ||| |||||    
T  25191170 cgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgctttttgtcgcggtgtttgtttatttcctattgaaagatcagcatcagtcaat 25191079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 464
Target Start/End: Complemental strand, 26469320 - 26469232
Alignment:
Q  376 gtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||||| |||||||||||||||||| |  |||||||||| |||  || ||||||  |||||  |||||||  |||||||||||||    
T  26469320 gtgcgacgttatgttgttcatcgtcttgtgcaacgttgtttgacttcatgtcttgttgcagtgttcgtttggttcctattgaaagatca 26469232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 461
Target Start/End: Original strand, 33298866 - 33298942
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaaga 461  Q
    ||||||||||||||||||||  || ||||||||||||| ||| ||| || |||||| ||||| || |||| ||||||    
T  33298866 tgtgttgttcatcgtcttgtgtggtgttgtttgatttctcgtcttgctgcggtgttcatttgattcatatcgaaaga 33298942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 402
Target Start/End: Complemental strand, 5917761 - 5917714
Alignment:
Q  355 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 402  Q
    |||| ||||||||||||||  ||||||||||||||||||| |||||||    
T  5917761 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctt 5917714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 458
Target Start/End: Original strand, 11196902 - 11196973
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 458  Q
    |||||||| ||||||||| ||||||||||||||||  ||| || ||| |||||| ||||| || ||||||||    
T  11196902 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaa 11196973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 464
Target Start/End: Complemental strand, 27747186 - 27747107
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||||| || |||||| || |  |||||||||||  ||||||||| |||||| ||||| || ||||||||||||||    
T  27747186 tgtgttgttcgtcatcttgtgcgacagtgtttgatttcctgttttgttgcggtgttcatttgattcatattgaaagatca 27747107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 385
Target Start/End: Original strand, 8981126 - 8981176
Alignment:
Q  335 aagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgtt 385  Q
    |||||||||||||||||  ||||| ||||||||||||||| ||||| ||||    
T  8981126 aagtgttttcttttgtgctttttcgtgatttcgtcgtctgagtgcggcgtt 8981176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 462
Target Start/End: Original strand, 18734026 - 18734107
Alignment:
Q  380 gacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||| ||||||||||  |||||||| ||||| ||||  ||||| | | ||||||||||||||||||| || ||||||||||||    
T  18734026 gacgatgtgttgttcgccgtcttgtgcggcgatgtta-atttctcttcttgttgtggtgtttatttgttttatattgaaagat 18734107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 523
Target Start/End: Complemental strand, 33214746 - 33214636
Alignment:
Q  413 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgt 512  Q
    |||||||||||||| |||| ||||||||  ||| |||  |||||||||||| || ||| ||||| ||| ||||||   ||||||||| |  ||| ||||     
T  33214746 gtttgatttcgcgtcttgtcgtggtgttcttttagttcctattgaaagatcggcgtcagtcaattacaaattcaaccaatgatttgggcttcaacgttgc 33214647  T
Q  513 agatccggaag 523  Q
    |||||||||||    
T  33214646 agatccggaag 33214636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 464
Target Start/End: Original strand, 16794305 - 16794382
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||| ||||||||| |  ||| |||||||||| ||| |||||  |||||| ||||| || ||||||||||||||    
T  16794305 tgttgttcgtcgtcttgtgcaacgtcgtttgatttcccgtattgttacggtgttcatttgattcatattgaaagatca 16794382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 523
Target Start/End: Complemental strand, 17693739 - 17693579
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||  |||||  ||||| |||||| || |||||| |||||||   |||||| ||||||||| | ||||||| ||| |||  |||| |||    
T  17693739 tgatttcgtcgtctaagtgcggtgttgtattgttcgtcttcttgtgcggcgtt---tgattttgcgttttgtcgcggtgtttgtttagttcctattaaaa 17693643  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||||  | ||| ||||| ||| ||||||   ||||||||| || |||  ||| |||||||||||    
T  17693642 gatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgcagatccggaag 17693579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 26469379 - 26469338
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgtttt 343  Q
    |||||||||||||||||||||| || ||||||||||| ||||    
T  26469379 tttcaatctaaataagtgattttcacatatatcaagtttttt 26469338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 523
Target Start/End: Original strand, 14585721 - 14585801
Alignment:
Q  443 tttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    |||||||  |||||||| ||||||||||  |||||||| |||||||   ||||||||||| ||| |||| |||||| ||||    
T  14585721 tttggttcgtattgaaatatcagcttcagacaatcacaaattcaatcattgatttggacgtcaacgttgcagatccagaag 14585801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 384 - 448
Target Start/End: Complemental strand, 39646291 - 39646227
Alignment:
Q  384 ttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggt 448  Q
    |||||||||||   ||||||| |||||||||||||||| ||  |||||||| |||||| ||||||    
T  39646291 ttgtgttgttcgcggtcttgtgcggcgttgtttgattttgcaatttgttgtagtgtttgtttggt 39646227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 2e-63; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 288 - 523
Target Start/End: Original strand, 47132793 - 47133028
Alignment:
Q  288 cttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgt 387  Q
    |||||| | ||| |||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| ||||||||||||||| ||| | ||||||    
T  47132793 ctttttcccttttctttcaatctaaataagtgatttctacatatatcaagtgttttcttttgtgctttttcgtgatttcgtcgtctgagtggggcgttgt 47132892  T
Q  388 gttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaa 487  Q
    ||||||| |||| |||| ||||||||||| ||||||||| |||||| ||||||  |||| || |||||||||||||||||||| ||||||||| ||||||    
T  47132893 gttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaaagatcagcttcagtcaatcacagattcaa 47132992  T
Q  488 ttgatgatttggacgccaatgttgtagatccggaag 523  Q
    | ||||||||||||| |||  ||| |||||||||||    
T  47132993 tcgatgatttggacgtcaacattgcagatccggaag 47133028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 304 - 498
Target Start/End: Original strand, 12635076 - 12635270
Alignment:
Q  304 tcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatt-ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 402  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| || ||| || ||| | |||||||||||| ||||||||||||| |||||||    
T  12635076 tcaatctaaataagtgattttcacatatatcaagtgttttcttttgtgtcttgttcgtgtttt-gacgtctgtgtgcggcgttgtgttgttcgtcgtctt 12635174  T
Q  403 gtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 498  Q
    || ||||||||||||||||  |||||||| |||||||| |||||||| |||||||||||||| ||| | | ||||||| |||||||  ||||||||    
T  12635175 gtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttcatattgaaagatcaactttagtaaatcacaaattcaatcaatgatttg 12635270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 301 - 516
Target Start/End: Original strand, 49626816 - 49627031
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttca-tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||| ||||||||||||||||| || | |||||||| |||||||||||||| ||||   |||||||||||||| |||||||| ||||||||||| ||||    
T  49626816 ctttctatctaaataagtgattttcacaaatatcaagcgttttcttttgtgttttttttgtgatttcgtcgtctatgtgcgaccttgtgttgttcgtcgt 49626915  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    ||||| ||||||||||||||||  | | |||||| |||| ||  |||||| |||||||||||||||||||| ||||||||| |||||||  |||||||||    
T  49626916 cttgtgcggcgttgtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttgg 49627014  T
Q  500 acgccaatgttgtagat 516  Q
    ||| ||| |||| ||||    
T  49627015 acgtcaacgttgcagat 49627031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 287 - 523
Target Start/End: Original strand, 44543163 - 44543397
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttg 386  Q
    |||||||||  || ||||| ||||||||||||||||| || | ||||||||||||||||||||||| ||||  ||||||||||||||  ||||||| |||    
T  44543163 tcttttttccctttctttcgatctaaataagtgattttcacaaatatcaagtgttttcttttgtgttttttg-tgatttcgtcgtctaagtgcgactttg 44543261  T
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 486  Q
    |||||||| |||| || | |||||||||||||||| || | || ||| ||||||  || |||| |||||||||||||||||| | ||||||||| |||||    
T  44543262 tgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattgcggtgttcgtt-ggttcatattgaaagatcagctttagtcaatcacagattca 44543360  T
Q  487 attgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||  |||||||||||| ||| |||| |||||| ||||    
T  44543361 atcaatgatttggacgtcaacgttgcagatccagaag 44543397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 302 - 499
Target Start/End: Original strand, 16161739 - 16161939
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||| ||||||    
T  16161739 tttcaatctaaataagtgatttccacatacatcaagt-ttttcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtct 16161837  T
Q  402 tgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 497  Q
    ||| ||||||||||||||||| |   |||||||||  ||||||  |||||||  ||||||||||||||||| |  |||||||| ||||| |  |||||||    
T  16161838 tgtgcggcgttgtttgatttcacatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttaagacaatcacaaattcattcaatgattt 16161937  T
Q  498 gg 499  Q
    ||    
T  16161938 gg 16161939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 301 - 519
Target Start/End: Original strand, 1742187 - 1742402
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || ||||||||||| ||||||||||| | ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  1742187 ctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtatttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 1742286  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||   |||  |||||||||||||| |||| ||||||||  |||  ||  |||||||||||| || ||||||||| ||| ||||||   |||||||||     
T  1742287 ttgt---gcgacgtttgatttcgcgtcttgtcgtggtgttcgtttatttcctattgaaagatcggcatcaatcaattacaaattcaaccaatgatttggg 1742383  T
Q  501 cgccaatgttgtagatccg 519  Q
    || ||| |||| |||||||    
T  1742384 cgtcaacgttgaagatccg 1742402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 264 - 518
Target Start/End: Complemental strand, 36775938 - 36775682
Alignment:
Q  264 gatctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgat 363  Q
    ||||||||||||||| || | || ||||||||  || |||||||||||||||| |||||| || ||| ||||||| |||||||| |||| ||||| ||||    
T  36775938 gatctagaatcacccctctgcat-cttttttccctttctttcaatctaaataaatgattttcacatacatcaagt-ttttctttcgtgttttttcgtgat 36775841  T
Q  364 ttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaa 459  Q
    ||| || | |  ||||||||||||||||||| ||||||||| | | |||||||||||||||   |||||||||  ||| ||  |||||||  ||||||||    
T  36775840 ttcttcattttagtgcgacgttgtgttgttcgtcgtcttgtgcagtgttgtttgatttcgcatcttttgttgtgcggtattcgtttggttcgtattgaaa 36775741  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatcc 518  Q
    |||| ||||||  |||||||| |||||||  ||||||||| || ||| |||| ||||||    
T  36775740 gatcggcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcc 36775682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 360 - 523
Target Start/End: Original strand, 24582913 - 24583075
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    |||||| |||||||  ||| ||| ||||||||||||||| ||||| |||||||||||||||| || | |||||| ||||||  || |||| |||||||||    
T  24582913 tgattttgtcgtctaagtgtgaccttgtgttgttcatcgccttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgtt-ggttcatattgaaa 24583011  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||||||||||| ||||||||| |||||||  |||||||||||| ||| |||| |||||| ||||    
T  24583012 gatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaag 24583075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 301 - 480
Target Start/End: Complemental strand, 40163685 - 40163507
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||| || ||||||||||||||||| ||||||||| | |||| | | |||| ||||||||||||||||||||  ||| ||||||||||| ||| |||||    
T  40163685 ctttctatataaataagtgatttccacatatatcaaattttttatct-gtgttttttcatgatttcgtcgtctcagtgtgacgttgtgttcttcgtcgtc 40163587  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcaca 480  Q
    |||| |  | || |||||||  ||||||||||| ||||||| |||||||  ||||| ||||||||||||| |||||||||    
T  40163586 ttgtgcaacattctttgattatgcgttttgttgcggtgtttgtttggtttctattggaagatcagcttcagtcaatcaca 40163507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 310 - 511
Target Start/End: Original strand, 41994337 - 41994540
Alignment:
Q  310 taaataagtgatttc-catatatatcaagtgttttcttttgtgtattttca-tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacg 407  Q
    ||||||||||||||  || ||||||||||| ||||||| ||| | ||||   |||||||  ||||||  |||| ||||||||||||||||||||||| |     
T  41994337 taaataagtgatttttcacatatatcaagttttttcttgtgttttttttttgtgatttcaacgtctgaatgcggcgttgtgttgttcatcgtcttgtgca 41994436  T
Q  408 gcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaat 507  Q
    ||||||||||||||||  | |||||||||||||  ||| ||| ||||||||||||||| |||| ||||||| ||||| |||  |||||||||||| |||     
T  41994437 gcgttgtttgatttcggatcttgttgtggtgttcgtttcgttcatattgaaagatcagtttcagtcaatcaaatatttaatcaatgatttggacgtcaac 41994536  T
Q  508 gttg 511  Q
    ||||    
T  41994537 gttg 41994540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 21947803 - 21947585
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||| ||||  ||||||||||||||  ||||  || |||||||||| |||||    
T  21947803 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttttg-tgatttcgtcgtctaagtgcagcgctgtgttgttcgtcgtc 21947705  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    | | ||||||||   ||||||||||| |||| | ||||||| ||| |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  21947704 tcggacggcgtt---tgatttcgcgtcttgtcgcggtgtttgtttagttcttattgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 21947608  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  21947607 cgtcaacgttgcagatccggaag 21947585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 302 - 523
Target Start/End: Original strand, 16262768 - 16262986
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||||||||||||||||||||| || ||||| |   | |||| |||||||| ||||  |||||| |||||||| ||| | || || ||||||  | || |    
T  16262768 tttcaatctaaataagtgattttcagatataac---tttttttttttgtgtttttttgtgattttgtcgtctgagtgtggcgatgcgttgttggttgttt 16262864  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
    ||| ||||||||||||||||||||| |||||||||||||  |||| || ||||||||| |||| || || |||||||||||||||||  ||||||||  |    
T  16262865 tgtgcggcgttgtttgatttcgcgtcttgttgtggtgttcgtttgattcatattgaaaaatcaactgcagtcaatcacatattcaatcaatgatttgtgc 16262964  T
Q  502 gccaatgttgtagatccggaag 523  Q
      ||| |||| |||||||||||    
T  16262965 atcaacgttgcagatccggaag 16262986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 301 - 426
Target Start/End: Complemental strand, 32679285 - 32679159
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttg-tgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    |||||||| ||||||||||||||||| ||||||||| |||||| ||||| | | ||||| ||||||| ||||||| ||||| ||||||||||||| || |    
T  32679285 ctttcaatttaaataagtgatttccacatatatcaattgttttattttggttttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcat 32679186  T
Q  400 cttgtacggcgttgtttgatttcgcgt 426  Q
    ||||| |||||| ||||||||||||||    
T  32679185 cttgtgcggcgtagtttgatttcgcgt 32679159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 301 - 502
Target Start/End: Original strand, 9341630 - 9341830
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| ||||||||  |||| || ||||||||||||||||||||||||| ||| | ||||||||||||||| |||    ||| |||||||| |||||    
T  9341630 ctttcaatataaataagaaattttcacatatatcaagtgttttcttttgtgtttttacgtgatttcgtcgtctgagtggagtgttatgttgttcgtcgtc 9341729  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| | |||||||||||||  | || |||||| ||||||| |||| || ||||| ||  ||||  ||||||||||||||||||| ||  ||| ||||||    
T  9341730 ttgtgcagcgttgtttgattctgtgtcttgttgcggtgtttgtttgattcatattaaactatca-attcaatcaatcacatattccatcaatgttttgga 9341828  T
Q  501 cg 502  Q
    ||    
T  9341829 cg 9341830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 287 - 478
Target Start/End: Original strand, 15492184 - 15492379
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttc-----atgatttcgtcgtctgtgtgcga 381  Q
    ||||||| |||||| ||||||||||||||| |||||| || ||||||||||| ||||||||||||| |||||      ||||||| ||||||| ||||||    
T  15492184 tctttttccatttc-tttcaatctaaataaatgattttcacatatatcaagttttttcttttgtgttttttctttgtgtgatttcatcgtctgagtgcga 15492282  T
Q  382 cgttgtgttgttcatcgtcttg-tacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatca 478  Q
    ||||||||||||| |  | ||| | |  | |||||||||||||||| |||||| || |||| ||||||| ||||||||| |||| |||||||||||||    
T  15492283 cgttgtgttgttcgttattttgatgcaacattgtttgatttcgcgtcttgttggggagtttgtttggttcatattgaaa-atcaacttcaatcaatca 15492379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 7337848 - 7337630
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||| ||||||  ||||| ||||||||||||| |||||    
T  7337848 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgt-tttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtc 7337750  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||   ||   |||||||||||||| |||| | ||||||| ||  ||| |||||||||||||  | ||||||||| ||| ||||||   |||||||| |    
T  7337749 ttgt---gcaacgtttgatttcgcgtcttgtcgcggtgtttgttcagttcatattgaaagatctacatcaatcaattacaaattcaagcaatgatttgca 7337653  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  7337652 cgtcaacgttgcagatccggaag 7337630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 265 - 523
Target Start/End: Original strand, 19060772 - 19061034
Alignment:
Q  265 atctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcat---- 360  Q
    ||||| ||||||||||| | ||  |||||||  || ||||| || |||||||| ||||| || | |||||||| |||||||||| ||| ||||  |        
T  19060772 atctaaaatcacccatctgcatctttttttccctttctttcgatttaaataagcgattttcacaaatatcaagcgttttcttttatgttttttttttttg 19060871  T
Q  361 -gatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
     |||||||||||||  ||||||| ||||||||||| |||||||||  |||||||||||||||  | | ||||||  ||| ||  |||||| |||||||||    
T  19060872 tgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgtggcgttgtttgatttgacatcttgttgcagtg-ttcgttggttcatattgaaa 19060970  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||| ||||||| |||||||||  ||||||  || ||||||||  ||||||||||||||| ||||    
T  19060971 gattagcttcagtcaatcacaggttcaatcaataatttggacatcaatgttgtagatccagaag 19061034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 23291828 - 23291609
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || ||||||||||| ||||||||||||| ||||  ||||||||||||||  || || |||||||||||||||  ||    
T  23291828 ctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgtttttttgtgatttcgtcgtctaagtacggcgttgtgttgttcattatc 23291729  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||   |||  |||||||||||| | |||| | ||||||  |||  ||  |||||||||||| || ||| ||||| ||| ||||||   |||||||||     
T  23291728 ttgt---gcgacgtttgatttcgcttcttgtcgcggtgttcgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttggg 23291632  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    |  ||| |||| |||||||||||    
T  23291631 catcaacgttgaagatccggaag 23291609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 301 - 488
Target Start/End: Complemental strand, 34413276 - 34413092
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||| || ||| ||       ||||||| |||| ||||| |||||| |||||||  ||||||| ||||||||||| |||||    
T  34413276 ctttcaatctaaataagtgattttcacatacat-------tttctttcgtgttttttcgtgattttgtcgtcttagtgcgacattgtgttgttcgtcgtc 34413184  T
Q  401 ttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 488  Q
    |||| |||||||||||||||||||   |||||||||  ||||||  |||| ||  |||||||||||||||| ||  |||||||| |||||||    
T  34413183 ttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgatttgtattgaaagatcagctccagacaatcacaaattcaat 34413092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 363 - 497
Target Start/End: Original strand, 34528695 - 34528829
Alignment:
Q  363 tttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||| ||||||  ||||| | ||||||||||| ||||||||  ||| ||||||||||||||| | |||||  ||||||| ||||||| ||||||||||||    
T  34528695 tttcatcgtctaagtgcggcattgtgttgttcgtcgtcttgcgcggtgttgtttgatttcgcatcttgtttcggtgtttctttggtttatattgaaagat 34528794  T
Q  463 cagcttcaatcaatcacatattcaattgatgattt 497  Q
    || ||||| ||||||||| |||||||  |||||||    
T  34528795 caacttcagtcaatcacagattcaatcaatgattt 34528829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 45415466 - 45415683
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||| ||| || || |||||||| |||||||  |||| ||||  ||||||||||||||  ||||| |||| |||||||| |||||    
T  45415466 ctttcaatttaaataagtggttttcacatctatcaagttttttctt--gtgtttttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtc 45415563  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||   || | |||||||||||||| |||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| | ||||   ||||||||||    
T  45415564 ttgt---gcatcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaactcaagcaatgatttgga 45415660  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  45415661 cgtcaacgttgcagatccggaag 45415683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 289 - 463
Target Start/End: Complemental strand, 8212107 - 8211937
Alignment:
Q  289 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtg 388  Q
    ||||||| ||| |||| |||||||||||||| ||| || ||||||||||| ||  ||||||||| ||||  ||||||||||||||   |||| |||||||    
T  8212107 ttttttccttttctttaaatctaaataagtggttttcacatatatcaagttttcccttttgtgttttttg-tgatttcgtcgtctaaatgcggcgttgtg 8212009  T
Q  389 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||||||||| ||||   |||||||| | ||| |||| | | |||| |||| |||| ||||||||||||    
T  8212008 ttgttcatcgtcttgtgcggc---gtttgattccacgtcttgtcgcgatgttcatttagttactattgaaagatc 8211937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 301 - 517
Target Start/End: Complemental strand, 13144997 - 13144785
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| |||||||||||| | ||| ||||||||| ||||  ||||||||||||||   |||| |||||||||||   | |||    
T  13144997 ctttcaatctaaataagtggttttcatatatatcaactttttccttttgtgt-tttttttgatttcgtcgtctaaatgcggcgttgtgttgtctgttgtc 13144899  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||   ||    ||||||||||||| |||| || ||||| ||||| || ||||||||||| |  ||| ||||||| ||| |||||||  ||||||||||    
T  13144898 ttgt---gcaacatttgatttcgcgtcttgtcgtagtgttcatttgattcatattgaaagaccgactttaatcaattacaaattcaatcaatgatttgga 13144802  T
Q  501 cgccaatgttgtagatc 517  Q
    || |||| ||| |||||    
T  13144801 cgtcaattttgcagatc 13144785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 355 - 518
Target Start/End: Original strand, 48750138 - 48750305
Alignment:
Q  355 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggtta 450  Q
    |||| ||||||||  ||||  ||||||||||||||||||| ||||||||| || ||||||||||||||||   |||||||||  ||||||  |||| ||     
T  48750138 tttcgtgatttcgctgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgattc 48750237  T
Q  451 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatcc 518  Q
     |||||||||||||||||||  |||||||| ||| |||  ||||||||| || ||| |||| ||||||    
T  48750238 gtattgaaagatcagcttcagacaatcacaaatttaatcaatgatttgggcgtcaacgttgcagatcc 48750305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 301 - 519
Target Start/End: Complemental strand, 35484576 - 35484362
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| |||||  |||||| ||||  || |||||||||||  ||||| ||||||||||||| |||||    
T  35484576 ctttcaatctaaataagtggttttcacatctatcaagttttttcaattgtgttttttg-tggtttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 35484478  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||   ||||  |||| |||||||| |||| | ||||||| ||   ||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  35484477 ttgt---gcgtcatttgctttcgcgtcttgtcgcggtgtttgttcaattcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 35484381  T
Q  501 cgccaatgttgtagatccg 519  Q
    || ||| |||| |||||||    
T  35484380 cgtcaacgttgcagatccg 35484362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 307 - 500
Target Start/End: Complemental strand, 6218007 - 6217817
Alignment:
Q  307 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 406  Q
    |||||| || |||||||||| | ||||||| | ||||||| |||   ||||| ||||||||||||| | | | | | |||| || ||| | ||||||| |    
T  6218007 atctaattacgtgatttccacacatatcaaattttttcttgtgt---ttttcttgatttcgtcgtcggcgcgtggcattgtattattcgttgtcttgtgc 6217911  T
Q  407 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    | ||||||||||||| |||| ||||| || ||||  ||||||  |||||||||||||| ||||| ||||||||| |||||||  ||||||||||    
T  6217910 gacgttgtttgattttgcgtcttgttatgttgttcgtttggtatatattgaaagatcaacttcagtcaatcacaaattcaatcaatgatttgga 6217817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 420
Target Start/End: Complemental strand, 13075821 - 13075703
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||  ||||||| | |||| ||||||||||||| ||||| ||||||| ||||||| |||||   || |||||||| | |||    
T  13075821 ctttcaatctaaataagtgattcacatatatct-aagtattttcttttgtgttttttcgtgatttcatcgtctgagtgcgtatttatgttgttcgttgtc 13075723  T
Q  401 ttgtacggcgttgtttgatt 420  Q
    |||| | |||||||||||||    
T  13075722 ttgtgcagcgttgtttgatt 13075703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 354 - 524
Target Start/End: Complemental strand, 31692602 - 31692433
Alignment:
Q  354 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaata 453  Q
    ||||| |||||| |||||||| ||| ||| ||| ||||||  ||||||||| ||| |||||||||||| || | |||||| |||| ||  |||||| |||    
T  31692602 ttttcgtgattttgtcgtctgagtgtgacattgcgttgtttgtcgtcttgtgcggtgttgtttgattttgcttcttgttgcggtg-ttcgttggttcata 31692504  T
Q  454 ttgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagt 524  Q
    ||||||||| ||||| | ||||| ||| ||| |||  ||||||| || | |||||||||||||||| ||||    
T  31692503 ttgaaagattagctttagtcaataacaaatttaatcaatgatttcgatgtcaatgttgtagatccgaaagt 31692433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 5983744 - 5983961
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||| |||||||||| || ||| || || |||||||| ||| ||||||||| |||   ||||||||||||||  ||||| |||| |||||||| |||||    
T  5983744 ctttcgatctaaataaatggttttcacatctatcaagtttttgcttttgtgtttttg--tgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtc 5983841  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   ||||||||||| || |||| | ||||||| ||| |||  ||||||||||||  | ||| ||||| ||| ||||||   |||||||||     
T  5983842 ttgtgcggc---gtttgatttcgtgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttggg 5983938  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| | || |||||||||||    
T  5983939 cgtcaacgctgcagatccggaag 5983961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 387
Target Start/End: Original strand, 1602022 - 1602106
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgt 387  Q
    ||||| ||||||||||||| |||| ||||||||||||| || ||||| |||| |||||||||||||||||||| | |||||||||||    
T  1602022 ctttcgatctaaataagtggtttctatatatatcaagt-ttatctttcgtgtcttttcatgatttcgtcgtct-tctgcgacgttgt 1602106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 463
Target Start/End: Complemental strand, 39927627 - 39927549
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||| |||||||||  |||||||||||||||| ||| |||||| |||||| ||||| || |||||||||||||    
T  39927627 tgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttgcggtgttcatttgtttcatattgaaagatc 39927549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 414 - 523
Target Start/End: Original strand, 44915655 - 44915764
Alignment:
Q  414 tttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgta 513  Q
    |||||||| ||||||||| | ||||||  ||| ||| |||||||||||||| | ||| ||||| ||| |||||||  ||||||||| || |||||||| |    
T  44915655 tttgattttgcgttttgtcgcggtgttcgtttagttcatattgaaagatcaacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgca 44915754  T
Q  514 gatccggaag 523  Q
    ||||||||||    
T  44915755 gatccggaag 44915764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 14872547 - 14872764
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||| |||  | | ||||||||| ||| | ||||||| ||||  |||||| ||||||   ||||| | ||||||||||| |||||    
T  14872547 ctttcaatgtaaataagtggtttttacaaatatcaagtttttccatttgtgttttttg-tgattttgtcgtccaagtgcggcattgtgttgttcgtcgtc 14872645  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   |||||||||||||| |||| | |||||| |||| |||  ||||||||||||  | ||| ||||| ||| ||||||   |||||||||     
T  14872646 ttgtgcggc---gtttgatttcgcgtcttgtcgcggtgttcatttagtt-ctattgaaagatcgacatcagtcaattacaaattcaaccaatgatttggg 14872741  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  14872742 cgtcaacgttgcagatccggaag 14872764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 34519142 - 34519218
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| |||| |||| ||||||||||||||||| ||| || |||||||||| ||||| || |||||||||||||    
T  34519142 tgttgttcgtcgttttgtgcggcgttgtttgatttctcgtcttcttgtggtgttcatttgattcatattgaaagatc 34519218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 37720306 - 37720243
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgattt 365  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||| ||||||    
T  37720306 ctttcaatctaaataagtgatttccacatacatcaagt-ttttcttttgtgttttttcgtgattt 37720243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 523
Target Start/End: Complemental strand, 34878383 - 34878245
Alignment:
Q  382 cgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacat 481  Q
    ||||||||||||| ||||||||| |||   |||||||||||||||||||| | ||||||| ||   ||  |||||||||||| || ||| ||||| |||     
T  34878383 cgttgtgttgttcgtcgtcttgtgcgg---tgtttgatttcgcgttttgtcgcggtgtttgttaatttcctattgaaagatcggcatcagtcaattacaa 34878287  T
Q  482 attcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||||||   ||||||||| || ||| |||| |||||||||||    
T  34878286 attcaaccaatgatttgggcgtcaacgttgaagatccggaag 34878245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 35462222 - 35462120
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||| ||| || || |||||||| ||| ||||||||| ||||  |||||||||||| |  ||||| ||||||||||||| |||||    
T  35462222 ctttcaatttaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtgtaagtgcggcgttgtgttgttcgtcgtc 35462124  T
Q  401 ttgt 404  Q
    ||||    
T  35462123 ttgt 35462120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 310 - 523
Target Start/End: Original strand, 43412285 - 43412499
Alignment:
Q  310 taaataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacgg 408  Q
    |||||||||||||| ||| ||||||||  |  ||||||||||| |||| | |||||| |||||||| |||    | |||||||||||||||||| | ||     
T  43412285 taaataagtgattttcatttatatcaaaagaattcttttgtgtttttttcgtgattttgtcgtctgagtgatgtgctgtgttgttcatcgtcttttgcga 43412384  T
Q  409 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatg 508  Q
    |||| ||||| |||| || |  |||  |||||| |||| || ||||||||| |||   ||||||||||| ||||||||||  |||||||| | | ||| |    
T  43412385 cgttatttgagttcgtgtctaattgcagtgtttgtttgattcatattgaaatatctatttcaatcaatcgcatattcaatcaatgatttgaaagtcaacg 43412484  T
Q  509 ttgtagatccggaag 523  Q
    ||| |||||| ||||    
T  43412485 ttgcagatccagaag 43412499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 412
Target Start/End: Complemental strand, 15435058 - 15434950
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || ||| ||||||| ||| |||||||   ||||  ||||||||||||||  ||||| |||| |||||||| | |||    
T  15435058 ctttcaatctaaataagtgtttttcacataaatcaagtttttccttttgt---ttttagtgatttcgtcgtctaagtgcggcgttctgttgttcgttgtc 15434962  T
Q  401 ttgtacggcgtt 412  Q
    |||| |||||||    
T  15434961 ttgtgcggcgtt 15434950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 516
Target Start/End: Original strand, 32394905 - 32395116
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||| |||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||    ||||| |||||||||| ||||||||    
T  32394905 ctttcaatctaaatgagtggttttcacatctatcaagtttttccttttgtgt-tttttgtgatttcgtcgttcaagtgcggcgttgtgttgctcatcgtc 32395003  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||   ||   |||||||||| |||||| | | ||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  32395004 ttgt---gcaacgtttgatttcccgttttatcgcggtgtttgttcagttcctattgaaagatctacatcattcaattacaaattcaaccaatgatttgga 32395100  T
Q  501 cgccaatgttgtagat 516  Q
    || ||| |||| ||||    
T  32395101 cgtcaacgttgcagat 32395116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 15836102 - 15836201
Alignment:
Q  304 tcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttg 403  Q
    ||||| |||||||||| ||| || ||| |||||||||||  |||||||| ||||| |||||| |||||||  ||| ||| ||||||||||| ||||||||    
T  15836102 tcaatttaaataagtggttttcacatacatcaagtgtttcgttttgtgt-ttttcgtgattttgtcgtctaagtgtgacattgtgttgttcgtcgtcttg 15836200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 286 - 516
Target Start/End: Complemental strand, 30506376 - 30506146
Alignment:
Q  286 ttcttttttcatttcctttcaat-ctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgt 384  Q
    ||||||||||  || |||||||| ||||||| ||||||| || ||||||||||| ||||| | ||| | || || | ||||| ||||||| ||| ||| |    
T  30506376 ttcttttttctctttctttcaattctaaataggtgattttcacatatatcaagttttttcctatgttttttctcgtaatttcatcgtctgagtgtgactt 30506277  T
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatatt 484  Q
    |||||||||  |||||||||    | ||| ||||||| ||| |  |||| ||||||  |||| ||  |||||||||||| |||| |||||||  || |||    
T  30506276 tgtgttgttagtcgtcttgtgtaacattgattgattttgcg-tccgttgcggtgttcgtttgcttcctattgaaagatcggcttgaatcaattgcagatt 30506178  T
Q  485 caattgatgatttggacgccaatgttgtagat 516  Q
    ||||  ||||| | ||||||||||||| ||||    
T  30506177 caatcaatgatgtagacgccaatgttgcagat 30506146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 464
Target Start/End: Original strand, 5855879 - 5855989
Alignment:
Q  354 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaata 453  Q
    |||| ||||||| |||||||  || ||||||||||||| |  || |||||| || | |||||||||||  ||| |||||||||||||||||| |||  ||    
T  5855879 ttttaatgattttgtcgtctaagtacgacgttgtgttgcttgtcatcttgtgcgacattgtttgattttacgtcttgttgtggtgtttattttgttttta 5855978  T
Q  454 ttgaaagatca 464  Q
    || ||||||||    
T  5855979 ttaaaagatca 5855989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 373
Target Start/End: Original strand, 31918899 - 31918966
Alignment:
Q  304 tcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtct 373  Q
    |||||||||||||||| ||| || ||||||||||| ||||||||  ||||||||  ||||||||||||||    
T  31918899 tcaatctaaataagtggttttcacatatatcaagttttttcttt--tgtatttttgtgatttcgtcgtct 31918966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 463
Target Start/End: Original strand, 39987401 - 39987475
Alignment:
Q  389 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||| ||||||||| ||||||||||||||||  ||| ||| || |||||| ||||| || |||||||||||||    
T  39987401 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaaagatc 39987475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 301 - 463
Target Start/End: Complemental strand, 11462632 - 11462475
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||||  || || || |||||||| ||||||||||||  ||||  |||||||||| |||  || || | || |||||||| |||||    
T  11462632 ctttcaatctaaataagtgggtttcacatctatcaagttttttcttttgtg--tttttgtgatttcgtcatctaagtccggcattttgttgttcgtcgtc 11462535  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||| ||||   |||||||||| ||| |||| | ||||||| ||| |||  ||||| ||||||    
T  11462534 ttgtgcggc---gtttgatttcacgtcttgtcgcggtgtttgtttagttcctattggaagatc 11462475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 459
Target Start/End: Original strand, 5701269 - 5701341
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||    
T  5701269 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa 5701341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 9687275 - 9687199
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| || |||||| ||||||||||||||||| | | || ||| |||||| ||||| || |||||||||||||    
T  9687275 tgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttcatttgattcatattgaaagatc 9687199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 9919399 - 9919475
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| |||||||||||||||||||||| |||| ||| || ||| |||||| ||||  ||  ||||||||||||    
T  9919399 tgttgttcgtcgtcttgtacggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 9919475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 19715966 - 19715890
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| | ||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  19715966 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 19715890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 28035149 - 28035225
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  |  |||||| ||||| || |||||||||||||    
T  28035149 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttcatttgattcatattgaaagatc 28035225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 35584689 - 35584613
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  || |||||| ||||| || |||||||||||||    
T  35584689 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 35584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 45789558 - 45789666
Alignment:
Q  415 ttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtag 514  Q
    |||||||  ||| |||||| | ||||| |||||||  |||||||| |||| ||| ||||||| ||| |||||||  ||||||||| || | | |||||||    
T  45789558 ttgattttacgtgttgttgcgatgtttgtttggttcctattgaaatatcaactttaatcaattacagattcaatcaatgatttgggcgtcgacgttgtag 45789657  T
Q  515 atccggaag 523  Q
    |||||||||    
T  45789658 atccggaag 45789666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 441
Target Start/End: Original strand, 21686838 - 21686916
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 441  Q
    ||||||||||||||  || || ||||||||||||| ||||||||| ||||   ||||||||| ||||||||| | |||||||    
T  21686838 tgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgttttgtcgcggtgttt 21686916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 499
Target Start/End: Complemental strand, 27580310 - 27580119
Alignment:
Q  303 ttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 402  Q
    ||||||||| ||||||| ||| || ||||||||||| ||| ||||  ||||||||  |||||||||||| |   |||| ||||||||||||| |||| |     
T  27580310 ttcaatctatataagtggttttcacatatatcaagtttttccttt--tgtatttttgtgatttcgtcgtttaaatgcggcgttgtgttgttcgtcgtatc 27580213  T
Q  403 gtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    ||  |||    |||||||| |||| |||| | |||||| |||| |||  ||||||||||||  ||||| | ||| ||| |||||||  |||||||||    
T  27580212 gtgtggc---atttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaagatcgacttcagtaaattacaaattcaataaatgatttgg 27580119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 352
Target Start/End: Complemental strand, 29738821 - 29738770
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgt 352  Q
    ||||||||||||||||||| ||| || || |||||||| |||||||||||||    
T  29738821 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgt 29738770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 518
Target Start/End: Complemental strand, 37720234 - 37720121
Alignment:
Q  409 cgttgtttgatttcgcgt--tttgttgtg--gtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcc 504  Q
    |||||||||||||||| |  |||||||||  |||||  |||||||  ||||||||||||| |||||  |||||||| ||||| || ||||||||| || |    
T  37720234 cgttgtttgatttcgcatcttttgttgtgtggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcatttaatgatttgggcgtc 37720135  T
Q  505 aatgttgtagatcc 518  Q
    || |||| ||||||    
T  37720134 aacgttgcagatcc 37720121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 464
Target Start/End: Original strand, 44637429 - 44637508
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||||| | ||||||| || ||||||||| |||| ||| |||||  |||||| ||||| || ||||||||||||||    
T  44637429 tgtgttgttcgtagtcttgtgcgacgttgtttggtttcccgtcttgttacggtgttcatttgattcatattgaaagatca 44637508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 412
Target Start/End: Complemental strand, 10776648 - 10776536
Alignment:
Q  296 atttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttca 395  Q
    |||| ||||||||||||||||||| |||  | |||||   ||||||| ||||||||  ||||  |||||| |||||||  ||||| |||||||||||||     
T  10776648 attttctttcaatctaaataagtggtttttacatata---agtgtttccttttgtgctttttg-tgatttagtcgtctaagtgcggcgttgtgttgttcg 10776553  T
Q  396 tcgtcttgtacggcgtt 412  Q
    ||||||| | |||||||    
T  10776552 tcgtcttatgcggcgtt 10776536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 463
Target Start/End: Complemental strand, 18569383 - 18569305
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||| || |||||| ||| |||||| |||||| ||| |||||| |||||| ||||  || |||||||||||||    
T  18569383 tgtgttgttcgtcatcttgtccggtgttgttagatttcccgtcttgttgcggtgttcatttaattcatattgaaagatc 18569305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 402
Target Start/End: Complemental strand, 27469722 - 27469680
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 402  Q
    ||||||||||||||  |||||||||||| ||||||||||||||    
T  27469722 tgatttcgtcgtcttagtgcgacgttgttttgttcatcgtctt 27469680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 393
Target Start/End: Original strand, 31984087 - 31984176
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgtt 393  Q
    ||||| ||||||||||||| ||| || ||||||||||| ||| ||| |||   ||||  ||||||||||||||  ||||| ||||||||||||    
T  31984087 ctttcgatctaaataagtggttttcacatatatcaagtttttccttgtgt---tttttgtgatttcgtcgtctaagtgcggcgttgtgttgtt 31984176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 32679380 - 32679334
Alignment:
Q  205 tctctaagttttctttctctttcagtcgttgaggaggggcagtttta 251  Q
    |||||||||||||||||||||||| |||| |||||||||  ||||||    
T  32679380 tctctaagttttctttctctttcactcgtcgaggaggggtggtttta 32679334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 475
Target Start/End: Complemental strand, 40163506 - 40163444
Alignment:
Q  413 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaa 475  Q
    |||||||||||| | || ||||||||||| |||||||  ||||| ||||||||||||| ||||    
T  40163506 gtttgatttcgcctcttattgtggtgtttgtttggtttctattgcaagatcagcttcagtcaa 40163444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 523
Target Start/End: Original strand, 18939336 - 18939444
Alignment:
Q  414 tttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgta 513  Q
    ||||||||| |||  ||||| |||||| ||||||||  ||||||||||||| ||||| ||||| ||| ||| |||  |||||||||||| | | |||| |    
T  18939336 tttgatttcacgtcctgttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttggacgtcgacgttgca 18939434  T
Q  514 gatccggaag 523  Q
    |||| |||||    
T  18939435 gatctggaag 18939444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 402
Target Start/End: Original strand, 39888099 - 39888199
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||| ||||| |||||||| ||| || ||||||| ||| ||||||||| ||| ||||  | ||||||||||||  ||||| ||||||| ||||| |||||    
T  39888099 ctttaaatcttaataagtggttttcacatatatctagttttttcttttatgttttttgtt-atttcgtcgtctaagtgcggcgttgtggtgttcttcgtc 39888197  T
Q  401 tt 402  Q
    ||    
T  39888198 tt 39888199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 459
Target Start/End: Original strand, 7997799 - 7997871
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  ||  ||||| ||||| || |||||||||    
T  7997799 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaa 7997871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 9172500 - 9172576
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  ||  ||||||||||||    
T  9172500 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 9172576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 9180482 - 9180558
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  ||  ||||||||||||    
T  9180482 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 9180558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 459
Target Start/End: Original strand, 31836817 - 31836889
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    |||||||| ||||||||| ||| ||||||||||||| ||| ||  || |||||| ||||| || |||||||||    
T  31836817 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa 31836889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 463
Target Start/End: Original strand, 40646700 - 40646756
Alignment:
Q  407 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||||||||| ||| ||  || |||||||||||| || |||||||||||||    
T  40646700 ggcgttgtttgatttcccgtcttcgtgcggtgtttatttgattcatattgaaagatc 40646756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 455
Target Start/End: Complemental strand, 40881083 - 40881015
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatatt 455  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||    
T  40881083 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatatt 40881015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 459
Target Start/End: Complemental strand, 50272211 - 50272139
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    |||||||| |||| |||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||    
T  50272211 tgttgttcgtcgttttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa 50272139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 51868716 - 51868640
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  ||  ||||||||||||    
T  51868716 tgttgttcgtcgtcttgtgcggcgttgtttgctttctcgtcttcttgcggtgttcattttattcttattgaaagatc 51868640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 2e-62; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 301 - 522
Target Start/End: Complemental strand, 41553623 - 41553402
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||| |||| |||||||||||||| |||||    
T  41553623 ctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtc 41553524  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||  | |||| ||||||||||||| ||||| |||||||  ||||||| ||||||||||||||  |||| ||||||||||||||| || ||||||||||    
T  41553523 ttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcacatattcagttaatgatttgga 41553424  T
Q  501 cgccaatgttgtagatccggaa 522  Q
    || ||| |||| ||||||||||    
T  41553423 cgtcaacgttgcagatccggaa 41553402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 301 - 520
Target Start/End: Complemental strand, 41553968 - 41553749
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||| |||| |||||||||||||| |||||    
T  41553968 ctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtc 41553869  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||  | |||| ||||||||||||| ||||| |||||||  ||||||| ||||||||||||||  |||| ||||||||||||||| || ||||||||||    
T  41553868 ttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcacatattcagttaatgatttgga 41553769  T
Q  501 cgccaatgttgtagatccgg 520  Q
    || ||| |||| ||||||||    
T  41553768 cgtcaacgttgcagatccgg 41553749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 301 - 520
Target Start/End: Complemental strand, 41554313 - 41554094
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||| |||| |||||||||||||| |||||    
T  41554313 ctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtc 41554214  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||  | |||| ||||||||||||| ||||| |||||||  ||||||| ||||||||| ||||  |||| ||||||||||||||| || ||||||||||    
T  41554213 ttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaatatcaatttcagtcaatcacatattcagttaatgatttgga 41554114  T
Q  501 cgccaatgttgtagatccgg 520  Q
    || ||| |||| | ||||||    
T  41554113 cgtcaacgttgcatatccgg 41554094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 301 - 524
Target Start/End: Original strand, 28476126 - 28476352
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||| || ||| ||||||| ||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||| |||||    
T  28476126 ctttcaatctaaataagtgattttcacatacatcaagt-ttttcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc 28476224  T
Q  401 ttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 496  Q
    |||| |||||||||||||||||||   |||||||||  ||||||  |||||||  |||||||||||||||||||  |||||||| ||||| |  ||||||    
T  28476225 ttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatt 28476324  T
Q  497 tggacgccaatgttgtagatccggaagt 524  Q
    ||| || ||| |||| |||||| |||||    
T  28476325 tgggcgtcaacgttgcagatccagaagt 28476352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 267 - 523
Target Start/End: Complemental strand, 24351063 - 24350806
Alignment:
Q  267 ctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttc 366  Q
    |||||||||||| |  | || ||||||||  || ||||||||||||||||||||||| || ||| ||||||| |||||||| |||| ||||  |||||||    
T  24351063 ctagaatcacccctgtgcatccttttttccctttctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttagtgatttc 24350965  T
Q  367 gtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc--gttttgttgtg--gtgtttatttggttaatattgaaagat 462  Q
    |||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| |   ||||||||||  |||||  |||||||  |||||||||||    
T  24350964 gtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacattttttgttgtgcagtgttcgtttggttcgtattgaaagat 24350865  T
Q  463 cagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||||||||  |||||||| |||||||  ||||||||| || ||| |||| |||||| ||||    
T  24350864 cagcttca--caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaag 24350806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 308 - 523
Target Start/End: Complemental strand, 38880761 - 38880545
Alignment:
Q  308 tctaaataagtgatttccatatatatcaagtgttttc-ttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 406  Q
    ||||||||||||| || ||  |||||||||| ||||| |||||||| || || |||||||||||| || ||||||||||||||||||   ||||||||||    
T  38880761 tctaaataagtgaatttcaggtatatcaagttttttccttttgtgttttctcgtgatttcgtcgtatgagtgcgacgttgtgttgtttgccgtcttgtac 38880662  T
Q  407 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 506  Q
    | || |||||||||| || | |||||| ||||||  |||||||  ||||||||||||||||||| ||||||||| |||||||  |||||||||  |||||    
T  38880661 gacgctgtttgattttgcatcttgttgcggtgttcgtttggttcttattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttgggtgccaa 38880562  T
Q  507 tgttgtagatccggaag 523  Q
     |||| ||||| |||||    
T  38880561 cgttgcagatctggaag 38880545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 24069584 - 24069361
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||| ||||| |||||||||||||| |  ||| |||| ||||||||||||| |||| | ||||||| ||||||| ||||| ||||||||||||| | ||    
T  24069584 ctttcgatctatataagtgatttccacacgtataaagttttttcttttgtgtctttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgttgt 24069485  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    ||||| ||||||| |||||||| |||| |||||| ||||||  |||| || ||||||||| ||||||||| ||||||||||  ||||||  ||||||||     
T  24069484 cttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatattgaaatatcagcttcgatcaatcacaggttcaatcaatgatttga 24069385  T
Q  500 acgccaatgttgtagatccggaag 523  Q
    ||| ||| |||| ||| |||||||    
T  24069384 acgtcaacgttgcagacccggaag 24069361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 202 - 523
Target Start/End: Original strand, 22742745 - 22743068
Alignment:
Q  202 ttctctctaagttttctttctctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtattcttttttcatttcc 301  Q
    |||||||||||||||||| |||||||| || | |||||||||   |||||| |||        |||||||||||||| || | ||  ||||| |  || |    
T  22742745 ttctctctaagttttcttcctctttcattcatcgaggaggggtgattttaggtcaattttta-atctagaatcacccctctgcatcttttttcccctttc 22742843  T
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||||||||||||||||||||| || ||| ||||||| |||||||| || | ||||| ||||||||||||||  || |||||||||||||||| ||||||    
T  22742844 tttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgttttttttcgtgatttcgtcgtcttagttcgacgttgtgttgttcgtcgtct 22742942  T
Q  402 tgtacggcgttgtttgatttcgcgtttt--gttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 497  Q
    ||| ||||||||||||||||| | ||||  |||||  || |||  |||||||  |||||||||||||||||||  |||||||| |||||||  |||||||    
T  22742943 tgtgcggcgttgtttgatttcacatttttagttgtgcggcgttcgtttggttcgtattgaaagatcagcttcagccaatcacaaattcaatcaatgattt 22743042  T
Q  498 ggacgccaatgttgtagatccggaag 523  Q
    |  || ||| |||| |||||| ||||    
T  22743043 gagcgtcaacgttgcagatccagaag 22743068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 9450322 - 9450104
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||| || || |||| ||| | | ||||||||| ||||  ||||||||||||||  ||| | ||||||||||||| |||||    
T  9450322 ctttcaatctaaataagtgattttcacatctatctagtttctccttttgtgttttttg-tgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtc 9450224  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| |||||||   ||||||||| |||||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  9450223 ttgtgcggcgtt---tgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 9450127  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  9450126 cgtcaacgttgcagatccggaag 9450104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 30757004 - 30756786
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||| || || ||||| || ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  30757004 ctttcaatctaaataagtgattttcacatctatcatgtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 30756906  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   ||||||||||||||||||| | ||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   || |||||||    
T  30756905 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagtttctattgaaagatctacatcagtcaattacaaattcaaccaataatttgga 30756809  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    |  ||| |||| |||||||||||    
T  30756808 catcaacgttgcagatccggaag 30756786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 330 - 523
Target Start/End: Complemental strand, 3224575 - 3224378
Alignment:
Q  330 atatcaagtgttttcttttgtgtatt-----ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc 424  Q
    |||||||||||||| |||||||| ||     ||||||||||||||||||| | ||   |||||||||||| | ||||||| || | || ||||||||| |    
T  3224575 atatcaagtgttttgttttgtgtttttcttcttcatgatttcgtcgtctgagggctgtgttgtgttgttcgtagtcttgtgcgacattatttgatttcac 3224476  T
Q  425 gttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||||||||| | ||||  ||||||| |||||||| ||||| ||||| ||||||||  |||||||| ||||||| |||| ||| ||||||||||||||||    
T  3224475 gttttgttgcgatgttcgtttggttcatattgaaggatcaacttcagtcaatcacggattcaattaatgattttgacgtcaa-gttgtagatccggaag 3224378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 301 - 519
Target Start/End: Original strand, 3394377 - 3394596
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||| ||||||||||||||||| ||  ||||| |||| ||||||| ||| | | ||| ||||||| ||||||| |||||  |||||||||||| |||||    
T  3394377 ctttcgatctaaataagtgattttcacgtatatgaagttttttcttgtgttt-tcttcgtgatttcatcgtctgagtgcggtgttgtgttgttcgtcgtc 3394475  T
Q  401 ttgtacggcgttgtttgatttcgcgttt--tgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 498  Q
    ||||  || |||||||||||||| || |  | ||| ||||||| ||| | | |||||||| ||||| ||||| |||||||||||||||||  |||||||     
T  3394476 ttgtgtggtgttgtttgatttcgtgtgtcttcttgcggtgtttgtttagatcatattgaatgatcaacttcagtcaatcacatattcaatcaatgatttc 3394575  T
Q  499 gacgccaatgttgtagatccg 519  Q
     ||| | ||||||||||||||    
T  3394576 tacgtcgatgttgtagatccg 3394596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 37837644 - 37837425
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || |||||| |||| ||||||||||||| ||||  ||||||| || |||  ||||| ||||||||||||| |||||    
T  37837644 ctttcaatctaaataagtggtttacacatatattaagttttttcttttgtgtttttttgtgatttcatcatctaagtgcggcgttgtgttgttcgtcgtc 37837545  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   ||||||||| |||| |||| | ||||||  ||| |||  ||||||||||||  | ||| ||||| ||| ||||||   |||||||||     
T  37837544 ttgtgcggc---gtttgattttgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaaattcaaccaatgatttggg 37837448  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  37837447 cgtcaacgttgcagatccggaag 37837425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 301 - 519
Target Start/End: Original strand, 11343703 - 11343930
Alignment:
Q  301 ctttcaatctaaataagtgatttccat-atatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcat--- 396  Q
    |||||||||||||||||||||||  |  || |||||| | ||||||||||||| ||||| ||||||||| ||||| ||||| ||||||||||||| |       
T  11343703 ctttcaatctaaataagtgatttttaacatctatcaaatattttcttttgtgttttttcgtgatttcgttgtctgagtgcggcgttgtgttgttcgtcga 11343802  T
Q  397 -----cgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattga 491  Q
         |||||||| ||  |||||| ||  |||||| |||||| ||||||| ||||||| |||||||||||| |  |||| ||||| ||| ||| |||| |    
T  11343803 atcgccgtcttgttcgatgttgttcgagctcgcgtcttgttgcggtgtttgtttggttcatattgaaagattaaattcagtcaattacaaatttaattaa 11343902  T
Q  492 tgatttggacgccaatgttgtagatccg 519  Q
    ||||||||||| ||| |||| |||||||    
T  11343903 tgatttggacgtcaacgttgcagatccg 11343930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 287 - 497
Target Start/End: Complemental strand, 1749343 - 1749140
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttg 386  Q
    |||||||||  || ||||||||||||||||||||||| || ||| ||||||| |||||||| |||          ||||||||||||  |||||||||||    
T  1749343 tcttttttccctttctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtg----------atttcgtcgtcttagtgcgacgttg 1749255  T
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacata 482  Q
    |||||||| ||||||||| |||| |||||||||||||| |  ||||||||  | ||||  |||||||  |||||||||||||||||||  |||||||| |    
T  1749254 tgttgttcgtcgtcttgtgcggcattgtttgatttcgcatcctttgttgtacgatgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaa 1749155  T
Q  483 ttcaattgatgattt 497  Q
    ||||||  |||||||    
T  1749154 ttcaatcaatgattt 1749140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 355 - 518
Target Start/End: Original strand, 35132899 - 35133066
Alignment:
Q  355 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgt--tgtggtgtttatttggtta 450  Q
    |||| ||||||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| | |  ||| |  |||||||||  |||||||     
T  35132899 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgttcggcgttgtttgatttcacatcctttattgtgtggtgttcgtttggttc 35132998  T
Q  451 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatcc 518  Q
     ||||||||||||| |||||  |||||||| |||||||  ||||||||| || ||| |||| ||||||    
T  35132999 gtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcc 35133066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 304 - 523
Target Start/End: Original strand, 42978518 - 42978734
Alignment:
Q  304 tcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttg 403  Q
    |||||||||||||||| ||| || |||||| |||| ||| |||||||||  |||  ||||||||||||||  ||||| ||||||||||||| ||||||||    
T  42978518 tcaatctaaataagtggttttcacatatataaagtttttccttttgtgttcttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttg 42978617  T
Q  404 tacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgc 503  Q
    | ||||   |||||||||| |||||| | | ||||||  ||| |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||| ||     
T  42978618 tgcggc---gtttgatttctcgttttatcgcggtgttcgtttagttcttattgaaagatcgacatcagtcaataacaaattcaaccaatgatttgggcgt 42978714  T
Q  504 caatgttgtagatccggaag 523  Q
    ||| |||| |||||||||||    
T  42978715 caacgttgcagatccggaag 42978734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 511
Target Start/End: Complemental strand, 34899792 - 34899586
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  34899792 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 34899694  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   |||||||||||| |||||| | ||||||| ||  |||  | ||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  34899693 ttgtgcggc---gtttgatttcgctttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 34899597  T
Q  501 cgccaatgttg 511  Q
    || ||| ||||    
T  34899596 cgtcaacgttg 34899586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 48316997 - 48316779
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||| ||| || || |||||| | ||||||||||||| ||||  ||||||||||||||  || || ||||||||||||| |||||    
T  48316997 ctttcaatttaaataagtggttttcacatctatcaaattttttcttttgtgttttttg-tgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtc 48316899  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| | |||||   ||||||||||| |||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  48316898 ttgtgcagcgtt---tgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 48316802  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| | || |||||||||||    
T  48316801 cgtcaacgctgcagatccggaag 48316779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 365 - 488
Target Start/End: Original strand, 5775172 - 5775294
Alignment:
Q  365 tcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||||| ||||| ||||||||||||||||||||| | |||| || ||||||||||||| ||||||  ||| || ||||||| |||| |||||||||    
T  5775172 tcgtcgtctgagtgcggcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtg-ttgtttggttcatatcgaaagatca 5775270  T
Q  465 gcttcaatcaatcacatattcaat 488  Q
    | |||| ||||||||||| |||||    
T  5775271 gattcagtcaatcacataatcaat 5775294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 287 - 495
Target Start/End: Complemental strand, 26623989 - 26623784
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttg 386  Q
    |||||||||  || |||||||| |||||||||  ||| || | ||||||||| |||  |||| ||| ||||  ||||||| ||||||| ||||| |||||    
T  26623989 tcttttttccctttctttcaatttaaataagttgtttacacacatatcaagtttttcattttatgttttttg-tgatttcatcgtctgagtgcggcgttg 26623891  T
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttca-atcaatcacatattc 485  Q
    |||||||| ||||||||||||||   ||||||||| || | |||||| ||||||| |||||||  ||||||||||||| |||||  |||||  |||||||    
T  26623890 tgttgttcgtcgtcttgtacggc---gtttgattttgcatcttgttgcggtgtttgtttggttcctattgaaagatcaacttcaggtcaattgcatattc 26623794  T
Q  486 aattgatgat 495  Q
    |||| |||||    
T  26623793 aattaatgat 26623784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 267 - 519
Target Start/End: Complemental strand, 39329012 - 39328761
Alignment:
Q  267 ctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatg--att 364  Q
    ||||||| ||||||| | ||  ||||| | ||| |||||||| |||||||||| ||| || | ||||||||| ||||||||| | | ||||  ||  |||    
T  39329012 ctagaattacccatctgcatcttttttcccttttctttcaatttaaataagtggttttcacacatatcaagttttttcttttttttctttttttgtgatt 39328913  T
Q  365 tcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||||  || || ||||||||||||| ||||||||| |||||||   |||||||||||||||| | ||||||| |||  ||  ||||||||||||     
T  39328912 tcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcg 39328816  T
Q  465 gcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccg 519  Q
    || ||| ||||| ||| ||||||   ||||||||| || ||| |||| |||||||    
T  39328815 gcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccg 39328761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 523
Target Start/End: Complemental strand, 12141491 - 12141275
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||||||||||||||||| ||| || || |||||||| ||||||||||||  ||||  ||||||||||||||  ||||| |||| |||||||  ||||||    
T  12141491 tttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg--tttttgtgatttcgtcgtctaagtgcggcgttttgttgtttgtcgtct 12141394  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
    ||| ||||    ||||||||||||| ||||   ||||||| ||| |||  ||||| ||||||  | ||| ||||| ||| ||||||   |||||||||||    
T  12141393 tgtgcggc---atttgatttcgcgtcttgtcacggtgtttgtttagttcctattggaagatctacatcagtcaattacaaattcaaccaatgatttggac 12141297  T
Q  502 gccaatgttgtagatccggaag 523  Q
    | ||| |||| |||||||||||    
T  12141296 gtcaacgttgcagatccggaag 12141275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 301 - 412
Target Start/End: Original strand, 47590217 - 47590327
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| ||||||||| ||||  ||||||||| ||||  ||||| ||||||||||||| |||||    
T  47590217 ctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgt-tttttgtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtc 47590315  T
Q  401 ttgtacggcgtt 412  Q
    |||| |||||||    
T  47590316 ttgtgcggcgtt 47590327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 331 - 523
Target Start/End: Original strand, 19296806 - 19296994
Alignment:
Q  331 tatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttg 430  Q
    |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| ||||||||| ||||   |||||||||||| |||||    
T  19296806 tatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcattttg 19296901  T
Q  431 ttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    | | ||||||| ||  |||  | ||||||||||  | ||| ||||| ||| ||||||   |||||||||||| ||| |||| |||||||||||    
T  19296902 tcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaag 19296994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 354 - 424
Target Start/End: Original strand, 48930724 - 48930794
Alignment:
Q  354 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc 424  Q
    ||||||||||||||||||||  ||||||||||||||| ||| ||||||||| |||||||||||||||||||    
T  48930724 ttttcatgatttcgtcgtcttagtgcgacgttgtgttattcgtcgtcttgtgcggcgttgtttgatttcgc 48930794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 360 - 522
Target Start/End: Complemental strand, 8001673 - 8001514
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||  ||||| |||| |||||||| ||||||||| |||||||   ||||||||||| |||| ||||||||| ||  |||  ||||||||    
T  8001673 tgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaa 8001577  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaa 522  Q
    ||||  | ||||||||| ||| ||||||   |||||||||||| ||| |||| |||| |||||    
T  8001576 gatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagattcggaa 8001514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 287 - 488
Target Start/End: Complemental strand, 44311996 - 44311794
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattt--tcatgatttcgtcgtctgtgtgcgacgt 384  Q
    |||||||||  || ||||||||||||||||||| |||||| ||||| |||   ||||| | ||| | |||  || ||||||| ||||||| ||||| |||    
T  44311996 tcttttttctctttctttcaatctaaataagtggtttccacatataccaaactttttcctgtgtttttttcttcgtgatttcatcgtctgagtgcgtcgt 44311897  T
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatatt 484  Q
    ||| |||||| ||||||| | || |||||||||||||| | ||||||||| || ||| |||||||  |||| ||||||| |||| | ||||| ||| |||    
T  44311896 tgtattgttcgtcgtcttctgcgacgttgtttgatttcacattttgttgt-gtatttgtttggtttctattaaaagatcggcttaagtcaattacaaatt 44311798  T
Q  485 caat 488  Q
    ||||    
T  44311797 caat 44311794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 385 - 464
Target Start/End: Complemental strand, 32522000 - 32521921
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||||| || |||||| ||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||    
T  32522000 tgtgttgttcgtcatcttgtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaaagatca 32521921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 38051253 - 38051150
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||| |||||||||| ||| |||| ||||||||||||| |||| ||||||||  ||||||||||||||| | ||  ||||| |||||||||||| |||||    
T  38051253 cttttaatctaaatatgtggtttcaatatatatcaagtttttttttttgtgttatttcatgatttcgtcatttgaatgcgatgttgtgttgttcgtcgtc 38051154  T
Q  401 ttgt 404  Q
    ||||    
T  38051153 ttgt 38051150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 511
Target Start/End: Complemental strand, 35665317 - 35665114
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||| |||||||||||||||||| | ||||||||| ||||||||||||||        |||||| ||||  || |||||  |||||||| ||| ||||     
T  35665317 ctttcgatctaaataagtgatttcgaaatatatcaaatgttttcttttgtg--------tgattttgtcgggtgagtgcgttgttgtgttattcgtcgtt 35665226  T
Q  401 ttgtacggcgttgtttgatttcgcgt-tttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    |||| || ||||||||||||| |||| ||||||| ||| ||  |||| || |||| ||||||||| ||||| || |||| | |||||||  ||||||||     
T  35665225 ttgtgcgacgttgtttgatttggcgtctttgttgcggtattcgtttgattcatatcgaaagatcaacttcagtcgatcagagattcaatcaatgatttga 35665126  T
Q  500 acgccaatgttg 511  Q
    ||| ||||||||    
T  35665125 acgtcaatgttg 35665114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 29617807 - 29617726
Alignment:
Q  383 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    ||||||| ||||||||||  |||||||||||||||||||||||| ||||||| |||||| |||| ||  |||||||||||||    
T  29617807 gttgtgtagttcatcgtcaggtacggcgttgtttgatttcgcgtcttgttgtagtgtttgtttgattcgtattgaaagatca 29617726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 464
Target Start/End: Complemental strand, 969630 - 969473
Alignment:
Q  310 taaataagtgatttccatatatatcaagtgttttcttttgtgtattttcat---gatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 406  Q
    |||||||||||||| || |||||  |||| ||||||| ||| | ||||| |   |||||| |||| ||  || | ||||||||||||| ||||||| | |    
T  969630 taaataagtgattttcacatataataagttttttcttgtgttttttttcttcgtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtcttttgc 969531  T
Q  407 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    ||||||||||||||| |||| || ||| ||||||| ||||||| ||||||||| ||||    
T  969530 ggcgttgtttgattttgcgtcttattgcggtgtttgtttggttcatattgaaaaatca 969473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 306 - 487
Target Start/End: Original strand, 39228926 - 39229102
Alignment:
Q  306 aatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgta 405  Q
    |||||||||||||| ||| || | ||||||||  |||  |||||||| ||||  ||||||||| ||||| |||||  |||||||||||| |||||||||     
T  39228926 aatctaaataagtggttttcacacatatcaagactttcattttgtgttttttg-tgatttcgttgtctgagtgcgttgttgtgttgttcgtcgtcttgtg 39229024  T
Q  406 cggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaa 487  Q
    ||||   ||| |||||||||| |||||||| || |  |||||||  ||||||||||||| ||||| ||||| ||| ||||||    
T  39229025 cggc---gttagatttcgcgtcttgttgtgatg-tcgtttggtttctattgaaagatcaacttcagtcaattacagattcaa 39229102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 301 - 404
Target Start/End: Original strand, 40993088 - 40993190
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| || ||    
T  40993088 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgt-tttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatc 40993186  T
Q  401 ttgt 404  Q
    ||||    
T  40993187 ttgt 40993190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 498
Target Start/End: Complemental strand, 32675565 - 32675380
Alignment:
Q  313 ataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgt 411  Q
    ||||||||||| ||||||| ||| || ||||||||||| | |||| |||||||  ||||| || ||||||||||||||||||| || | ||||  ||       
T  32675565 ataagtgattttcatatatttcatgttttttcttttgtatttttttcatgattctgtcgtttgagtgcgacgttgtgttgttcgtcattttgtgtggtac 32675466  T
Q  412 tgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 498  Q
    | |||||||||  ||||||||||||| ||  |||||||  |||||||| ||  | |||||||||| |||||||| ||| ||||||||    
T  32675465 tatttgatttcttgttttgttgtggtattcgtttggtttctattgaaatat-ggtttcaatcaattacatattcgattaatgatttg 32675380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 394
Target Start/End: Complemental strand, 13797117 - 13797025
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 394  Q
    |||||||| ||||||||||||||  | || |||||||| ||| ||||||||| |||| |||||||||||||||  ||||| |||||||||||||    
T  13797117 ctttcaatttaaataagtgattttaacatctatcaagtttttccttttgtgtttttt-atgatttcgtcgtctaagtgcggcgttgtgttgttc 13797025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 463
Target Start/End: Original strand, 48061329 - 48061486
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||  ||||  ||||||||||||||  ||||| | || |||||||| |||||    
T  48061329 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg--tttttgtgatttcgtcgtctaagtgcggcattttgttgttcgtcgtc 48061426  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    || |   |||  ||||||||| |||| |||| | ||||||| ||| |||  ||||||||||||    
T  48061427 ttat---gcgacgtttgattttgcgtcttgtcgcggtgtttgtttagttcctattgaaagatc 48061486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 464
Target Start/End: Original strand, 6002000 - 6002104
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    |||||||||| |||| ||| | || | |||||||| ||||||||| ||||||||||||||||| ||| | || | |||||| ||||| || |||||||||    
T  6002000 tgatttcgtcatctgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtatcgtcgcggtgttcatttgattcatattgaaa 6002099  T
Q  460 gatca 464  Q
    |||||    
T  6002100 gatca 6002104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 39171776 - 39171557
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||| ||||||||||||| ||| ||||| |||||||| ||| ||||||||| ||||  |||||||||| |||  ||||  |||| |||||||| |||||    
T  39171776 ctttcgatctaaataagtggttttcatatctatcaagtttttccttttgtgtttttttgtgatttcgtcatctaagtgctgcgttttgttgttcgtcgtc 39171677  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| | ||   |||||||||  ||| ||||   | ||||| ||  |||   |||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  39171676 ttgtgcagc---gtttgattttacgtcttgtcacgatgtttgttcagttccaattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 39171580  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  39171579 cgtcaacgttgcagatccggaag 39171557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 267 - 403
Target Start/End: Original strand, 11653751 - 11653886
Alignment:
Q  267 ctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttt-tcttttgtgtattttcatgattt 365  Q
    ||||||||| ||||| | ||| |||||| ||||  ||  |||||||||||||||||| || |||||  |||| ||| | |||||||  ||||| ||||||    
T  11653751 ctagaatcatccatctgcattttttttttatttttttaaaatctaaataagtgattttcacatata--aagtttttattttttgtgctttttcgtgattt 11653848  T
Q  366 cgtcgtctgtgtgcgacgttgtgttgttcatcgtcttg 403  Q
    ||||||||| ||  ||||||||||||||| ||||||||    
T  11653849 cgtcgtctgagtatgacgttgtgttgttcgtcgtcttg 11653886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 289 - 523
Target Start/End: Complemental strand, 19404952 - 19404724
Alignment:
Q  289 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtg 388  Q
    ||||||| ||| ||||||||||||||||||| ||| || ||| ||||||| ||| ||||||   |||||  ||||||||||||||  ||||| |||| |     
T  19404952 ttttttccttttctttcaatctaaataagtggttttcacataaatcaagtttttccttttg---attttagtgatttcgtcgtctaagtgcggcgttcta 19404856  T
Q  389 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 488  Q
    |||||| |||||||||   || | ||||||||| || | |||| | ||||||  ||| |||  | |||||||||   | ||  ||||| ||| |||||||    
T  19404855 ttgttcgtcgtcttgt---gcatcgtttgattttgcatcttgtcgcggtgttcttttagttcctcttgaaagattgacatctgtcaattacaaattcaat 19404759  T
Q  489 tgatgatttggacgccaatgttgtagatccggaag 523  Q
      ||||||||| || |||||||| |||||||||||    
T  19404758 caatgatttgggcgtcaatgttgcagatccggaag 19404724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 360 - 488
Target Start/End: Original strand, 22087281 - 22087406
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||| ||||||| ||||||||||||||||| | | ||||||||   || |||||||||||| || ||||||  |||||| |||| |   ||||||||    
T  22087281 tgatttcatcgtctgggtgcgacgttgtgttgtccgttgtcttgta---cgatgtttgatttcgtgtcttgttgctgtgtttgtttgatacctattgaaa 22087377  T
Q  460 gatcagcttcaatcaatcacatattcaat 488  Q
    ||||| ||||| ||||| ||| |||||||    
T  22087378 gatcaacttcagtcaattacaaattcaat 22087406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 462
Target Start/End: Original strand, 25067990 - 25068147
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||||||||||| |||||  ||||  |||||||||||  ||||  ||||||| || |||| ||||| ||||||||||||| ||| |    
T  25067990 ctttcaatctaaataagtgatttccacatata--aagt-ctttcttttgtgcttttttgtgatttcatcatctgagtgcggcgttgtgttgttcgtcg-c 25068085  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||| ||| ||| ||| |||| || | |||||| ||||||  ||| |||  |||||||||||    
T  25068086 ttgtgcggtgtttttttattttgcatcttgttgcggtgttcgttttgttcctattgaaagat 25068147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 499
Target Start/End: Complemental strand, 5348719 - 5348583
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||| |||| || ||||||||||| | || |||| |||   ||||||||||  ||| || ||| ||||||  |||||||  ||||||||    
T  5348719 tgatttcgtcgtctgagtgcaacattgtgttgttcgttgttttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttggttcctattgaaa 5348623  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    |||||  |||||||||| ||| |||||||  |||||||||    
T  5348622 gatcaatttcaatcaattacagattcaatcaatgatttgg 5348583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 464
Target Start/End: Complemental strand, 31235863 - 31235786
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||| ||||||||| | ||||||||||||||| ||| | |||| |||||| ||||| || ||||||||||||||    
T  31235863 tgttgttcgtcgtcttgtgcagcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatca 31235786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 1448901 - 1448825
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| |||| |||| ||||||||||||||||| ||| || ||| |||||| ||||| || |||||||||||||    
T  1448901 tgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 1448825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 23786581 - 23786657
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||| | ||||||||||||||||| ||| || ||| |||||| ||||| || |||||||||||||    
T  23786581 tgttgttcgtcgtcttctgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 23786657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 362 - 523
Target Start/End: Original strand, 38798747 - 38798905
Alignment:
Q  362 atttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaaga 461  Q
    |||| |||||||  || |||||||||||||||| ||||||||| ||||   ||||||||| ||||||||| |  |||||| |||  ||  ||||||||||    
T  38798747 attttgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgttttgtcgcagtgtttgtttatttcctattgaaaga 38798843  T
Q  462 tcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    || || ||| ||||| ||| ||||||   ||||||||| || |||  ||| |||||||||||    
T  38798844 tcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgaagatccggaag 38798905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 439
Target Start/End: Complemental strand, 4121856 - 4121734
Alignment:
Q  318 tgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgttt 416  Q
    ||||||||| ||||||||||  ||||||||| | | |||| | |||||||||||||||  |||| | ||||||||||||  || |||| || | ||||||    
T  4121856 tgatttccacatatatcaagctttttcttttatatttttttcgtgatttcgtcgtctggatgcggcattgtgttgttcactgtattgtgcgacattgttt 4121757  T
Q  417 gatttcgcgttttgttgtggtgt 439  Q
    |||||||| | |||||| |||||    
T  4121756 gatttcgcatcttgttgcggtgt 4121734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 14627950 - 14627874
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| |||| |||| ||||||||||||||||| ||| ||  |  |||||||||||| || |||||||||||||    
T  14627950 tgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttagtacggtgtttatttgattcatattgaaagatc 14627874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 19560007 - 19560079
Alignment:
Q  390 tgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    ||||| ||||||||| ||||||||||||||||| | |||| |||  ||||| ||||| || ||||||||||||    
T  19560007 tgttcgtcgtcttgtgcggcgttgtttgatttctcattttcttgatgtgttcatttgattcatattgaaagat 19560079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 20116588 - 20116664
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| || |||||||||||||  ||| || ||| |||||| ||||| || |||||||||||||    
T  20116588 tgttgttcgtcgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgattcatattgaaagatc 20116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 459
Target Start/End: Original strand, 32684674 - 32684746
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||    
T  32684674 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaa 32684746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 35496246 - 35496170
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||||||||||| ||||||||||| ||||| |||  |  || |||||| ||||| || |||||||||||||    
T  35496246 tgttgttcatcgtcttgtgcggcgttgtttcatttcccgtcctcgtgcggtgttcatttgatttatattgaaagatc 35496170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 35667303 - 35667227
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||| ||||||||  ||| || ||| |||||| ||||| || |||||||||||||    
T  35667303 tgttgttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgattcatattgaaagatc 35667227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 369
Target Start/End: Complemental strand, 5078579 - 5078513
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtc 369  Q
    |||| |||||||||||||||||  | ||||||||||| ||||||||||||| ||||| | ||||||||    
T  5078579 tttcgatctaaataagtgatttttacatatatcaagt-ttttcttttgtgttttttcgtaatttcgtc 5078513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 422
Target Start/End: Original strand, 26583720 - 26583755
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttc 422  Q
    |||||||||||||||||| |||||||||||||||||    
T  26583720 tgttgttcatcgtcttgtgcggcgttgtttgatttc 26583755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 458
Target Start/End: Complemental strand, 42067132 - 42067061
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 458  Q
    |||||||| ||||||||| ||||| ||||||||||| ||| || ||| |||||| ||||| || ||||||||    
T  42067132 tgttgttcgtcgtcttgtgcggcgctgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaa 42067061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 459
Target Start/End: Complemental strand, 1100838 - 1100763
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgc---gttttgttgtggtgtttatttggttaatattgaaa 459  Q
    |||||||||||||||||| ||| ||||||||||||| |    ||||||||| ||||| ||||| || |||||||||    
T  1100838 tgttgttcatcgtcttgtgcggtgttgtttgatttcccttttttttgttgttgtgttcatttgttttatattgaaa 1100763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 487
Target Start/End: Complemental strand, 9977333 - 9977209
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||  ||||  |||||| |||||| |||||||||  ||||||   ||||||||||| |||| | |||| | |||| |||  ||||||||    
T  9977333 tgatttcgtcgtctaagtgcagcgttgtattgttcgtcgtcttgtttggcgtt---tgatttcgcgtcttgtcgcggtgctcatttagttcctattgaaa 9977237  T
Q  460 gatcagcttcaatcaatcacatattcaa 487  Q
    ||||  ||||| ||||| ||| ||||||    
T  9977236 gatcgacttcagtcaattacaaattcaa 9977209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 22927941 - 22927865
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  ||  ||||||||||||    
T  22927941 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 22927865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 26583644 - 26583676
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatc 334  Q
    |||||||||||||||||||||| ||||||||||    
T  26583644 tttcaatctaaataagtgattttcatatatatc 26583676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 34773717 - 34773793
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||| ||| ||||||| | |||||||||||||||||  || || ||| |||||| ||||| || |||||||||||||    
T  34773717 tgttattcgtcgtcttatgcggcgttgtttgatttcctgtcttcttgcggtgttcatttgattcatattgaaagatc 34773793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 46339060 - 46339136
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  |  |||||| ||||| || |||||||||||||    
T  46339060 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatc 46339136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 463
Target Start/End: Complemental strand, 46818475 - 46818411
Alignment:
Q  399 tcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||| ||||||||||||||||| ||| |||||| |||||| ||||  || ||||| |||||||    
T  46818475 tcttgtgcggcgttgtttgatttctcgtattgttgcggtgttcatttaattcatattaaaagatc 46818411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 46822021 - 46822097
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| || |||||| ||||||||||||||||| ||| ||  || |||||| ||||| || ||||| |||||||    
T  46822021 tgttgttcgtcttcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaagatc 46822097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 9e-62; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 209 - 523
Target Start/End: Complemental strand, 29574910 - 29574596
Alignment:
Q  209 taagttttctttctctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtattcttttttc-atttcctttcaa 307  Q
    |||||||| ||||||||||| |||| |||||||||  |||||||||||       || |||||||||||| |  | || |||||||| |||| |||||||    
T  29574910 taagttttatttctctttcactcgtcgaggaggggtggttttagatcatttttt-gacctagaatcaccc-tgtgcatccttttttccattttctttcaa 29574813  T
Q  308 tctaaataagtgatttccatatatatcaagtgttttcttttgtgtatt--ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgta 405  Q
    ||||||||||||||||||| |||||||||||||||| |||||||| ||  ||| ||||||||||||| | ||||| ||||||||||||| |||||||||     
T  29574812 tctaaataagtgatttccacatatatcaagtgtttt-ttttgtgttttgtttcgtgatttcgtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtg 29574714  T
Q  406 cggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcca 505  Q
    |||| |||||||||||| | ||||||||  |||||| |||| || |||||||||||| ||||||| ||||||||| |||||||  |||||||||||||||    
T  29574713 cggcattgtttgatttcacattttgttgcagtgtttgtttgattcatattgaaagattagcttcagtcaatcacagattcaatcaatgatttggacgcca 29574614  T
Q  506 atgttgtagatccggaag 523  Q
    | |||| |||||||||||    
T  29574613 acgttgcagatccggaag 29574596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 202 - 440
Target Start/End: Complemental strand, 12648208 - 12647971
Alignment:
Q  202 ttctctctaagttttctttctctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtattcttttttca-tttc 300  Q
    |||||| |||||||||||||||||| | ||||||||||||||  ||||||| |||       || |||||||||||| |||  || ||||||||  |||     
T  12648208 ttctctttaagttttctttctcttttactcgttgaggaggggtggttttaggtcatttttt-gacctagaatcacccctccacat-cttttttctctttt 12648111  T
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||  |||||  |||||||||||| |||||    
T  12648110 ctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgtattttcgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtc 12648011  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtt 440  Q
    |||| ||||||||||||||||| ||| |||||| ||||||    
T  12648010 ttgtgcggcgttgtttgatttctcgtcttgttgcggtgtt 12647971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 302 - 523
Target Start/End: Original strand, 24461351 - 24461575
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| | ||||| ||||||| | |||   ||||||||||||| | || |    
T  24461351 tttcaatctaaataagtgatttccacatatatcaagtgtttttttttgtgtttttacgtgattccgtcgtccgagtgttgcgttgtgttgttcgttgttt 24461450  T
Q  402 tgtacggcgttgtttgatt---tcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 498  Q
    ||| |||||||||||||||   | |||  |||||| ||||||  ||||||| |||||||||||||| ||||| |||| |||| ||||||| |||||||||    
T  24461451 tgtgcggcgttgtttgattattttgcgccttgttgcggtgttcgtttggttcatattgaaagatcaacttcagtcaaccacagattcaatcgatgatttg 24461550  T
Q  499 gacgccaatgttgtagatccggaag 523  Q
    |||||||| |||| |||||||||||    
T  24461551 gacgccaacgttgcagatccggaag 24461575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 32448808 - 32448587
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||| ||||||||||||||||| ||   |||||||| ||||| |||||||| ||||  ||||||||||||||  ||||||| ||||||||||| |||||    
T  32448808 ctttcgatctaaataagtgattttcaccaatatcaagcgttttattttgtgtttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtc 32448709  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| || ||||||||||||| || | |||||| |||| ||  |||||| |||||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  32448708 ttgtgcgccgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttgga 32448610  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||| ||||    
T  32448609 cgtcaacgttgcagatccagaag 32448587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 301 - 488
Target Start/End: Complemental strand, 6359063 - 6358874
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||| |||| | ||||||||||| ||||| ||||||| ||||| |||||| |||||||| ||| | ||||||||||||| |||||    
T  6359063 ctttcaatttaaataagtgttttctacatatatcaagttttttcctttgtgttttttcgtgattttgtcgtctgagtgtgtcgttgtgttgttcgtcgtc 6358964  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 488  Q
    |||| | ||||||||||||||||| | |||||||  ||||||| |||||||  ||||||||||||| |||||  || ||||| |||||||    
T  6358963 ttgtgcagcgttgtttgatttcgcatcttgttgtacggtgtttgtttggttcttattgaaagatcaacttcagacagtcacaaattcaat 6358874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 354 - 523
Target Start/End: Original strand, 10929627 - 10929797
Alignment:
Q  354 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgttt-gatttcgcgttttgttgtggtgtttatttggttaat 452  Q
    ||||| ||||||||||||||| |||||  |||||||||||| |||||||||||| |||||||| ||||| |||| |||||| ||||||  ||||||| ||    
T  10929627 ttttcgtgatttcgtcgtctgagtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttcgtttggttcat 10929726  T
Q  453 attgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
     |||||| |||||||||| ||||||||| |||||||  |||||||||||  ||| |||| |||||||||||    
T  10929727 gttgaaaaatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgcagatccggaag 10929797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 302 - 499
Target Start/End: Original strand, 3308853 - 3309053
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||||||||||||||||||||| || ||| ||||||| |||||||| |||| ||||| ||||||||||||||  ||||||||||||||| ||  ||||||    
T  3308853 tttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttatttgtcgtct 3308951  T
Q  402 tgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 497  Q
    ||| |||||||||||||||| || |  ||||||||  ||||||  |||||||  |||||||| |||| |||||  |||||||| |||||||  |||||||    
T  3308952 tgtgcggcgttgtttgatttagcatcctttgttgtgcggtgttcgtttggtttgtattgaaatatcaacttcagacaatcacaaattcaatcaatgattt 3309051  T
Q  498 gg 499  Q
    ||    
T  3309052 gg 3309053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 202 - 523
Target Start/End: Original strand, 37994090 - 37994416
Alignment:
Q  202 ttctctctaagttttctttctctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtattcttttttcatttcc 301  Q
    ||||||||| ||||||||||||||||| || | ||||| |||  ||||||| |||       || |||||||||||| || | ||| | ||| |  || |    
T  37994090 ttctctctaggttttctttctctttcaatcatcgaggaagggtggttttaggtcattttt--gacctagaatcacccctctgcattttgtttcccctttc 37994187  T
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgt--attttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    |||| || |||||||||||||| || ||| ||||||||||||||| ||| |  || ||| ||||||||| ||||| ||||| ||||||||||||| || |    
T  37994188 tttcgatttaaataagtgattttcacatagatcaagtgttttcttgtgtttttatcttcgtgatttcgttgtctgagtgcggcgttgtgttgttcgtctt 37994287  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacat-----attcaattgatga 494  Q
    | |||||||| ||||||||||| || | ||||||  ||||| ||||| || ||||||||| |||||||||| ||||||||||     |||||||  ||||    
T  37994288 cctgtacggcattgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagcttcagtcaatcacatcacaaattcaatgaatga 37994387  T
Q  495 tttggacgccaatgttgtagatccggaag 523  Q
    |||||||| ||  |||| |||||||||||    
T  37994388 tttggacgtcagcgttgcagatccggaag 37994416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 355 - 523
Target Start/End: Complemental strand, 10237356 - 10237184
Alignment:
Q  355 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc--gttttgttgtg--gtgtttatttggtta 450  Q
    |||| ||||||||||||||  ||||||||||||||||||| ||||||||| | ||||| |||||||||||   ||||||||||  |||||  |||||||     
T  10237356 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcagcgttctttgatttcgcatcttttgttgtgcagtgttcgtttggttc 10237257  T
Q  451 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
     |||||||||||||||||||  |||||||| |||||||  |||||||||||| ||| |||| |||||| ||||    
T  10237256 gtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacgttgcagatccagaag 10237184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 287 - 463
Target Start/End: Complemental strand, 43397320 - 43397147
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttg 386  Q
    ||||||| | ||| ||||||||||||||||||| ||| || ||||||||||| ||||||||||||| ||||| ||||||||||||||  ||| | |||||    
T  43397320 tctttttcccttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttttcgtgatttcgtcgtctaagtgtggcgttg 43397221  T
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| |||||||||  |||   |||||||||||||| |||| | ||||||  |||  || |||||||||||||    
T  43397220 tgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgtcgcggtgttcgtttatttcatattgaaagatc 43397147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 302 - 499
Target Start/End: Complemental strand, 4904330 - 4904137
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||||||||||||||||| ||| || ||||||||||| ||||||||||||| ||||  |||||||||||||   ||| | ||||||||||||| ||||||    
T  4904330 tttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgt-tttttgtgatttcgtcgtcaaagtgtggcgttgtgttgttcgtcgtct 4904232  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    |||   |||  ||||||||| | || |||||| ||||||  ||||||| |||||||||||||  | ||| ||||| ||| |||||| |||||||||||    
T  4904231 tgt---gcgacgtttgattttgtgtcttgttgcggtgttcgtttggttcatattgaaagatcgacatcagtcaattacaaattcaactgatgatttgg 4904137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 38445080 - 38445298
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||| ||| || || |||||||| ||||||||||||| ||||  ||||||||||||||  ||||  ||||||||||||| |||||    
T  38445080 ctttcaatataaataagtggttttcacatctatcaagttttttcttttgtgt-tttttgtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtc 38445178  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   ||||||||||||||||| | | ||||||| ||  |||  ||||||||||||  | ||| | ||| ||| ||||||   ||||||||||    
T  38445179 ttgtgcggc---gtttgatttcgcgttttatcgcggtgtttgttcagttcctattgaaagatctacatcagtaaattacaaattcaaccaatgatttgga 38445275  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  38445276 cgtcaacgttgcagatccggaag 38445298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 301 - 470
Target Start/End: Original strand, 14955436 - 14955608
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||  | | ||||  |||||| |||||||   ||||||||||||||||||||| |     
T  14955436 ctttcaatctaaataagtgatttccacatacatcaagttttttctttcttattttttg-tgattttgtcgtcttaatgcgacgttgtgttgttcatcatt 14955534  T
Q  401 ttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggttaatattgaaagatcagcttca 470  Q
    |||| ||||||||||||||||||| |  ||||||||  ||||||  ||||||| ||||||||| |||| |||||    
T  14955535 ttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcatattgaaatatcatcttca 14955608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 363 - 518
Target Start/End: Complemental strand, 17249274 - 17249120
Alignment:
Q  363 tttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||||| ||||  ||||||| ||||||||||| ||||||||| |||||| |||| |||| || | |||||| ||||||| || |||| ||||||||||||    
T  17249274 tttcgttgtctaagtgcgaccttgtgttgttcgtcgtcttgtgcggcgtagttttatttggcatcttgttgcggtgtttgtt-ggttcatattgaaagat 17249176  T
Q  463 cagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatcc 518  Q
    ||| |||| ||||||||| |||||||  |||||||||||| ||| |||| ||||||    
T  17249175 cagtttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 17249120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 12647149 - 12647077
Alignment:
Q  451 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    |||||||||||||||||||| ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  12647149 atattgaaagatcagcttcagtcaatcacagattcaatcgatcatttggacgccaatgttgtagatccggaag 12647077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 497
Target Start/End: Original strand, 4264386 - 4264578
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||| ||| |||||||||| ||| || ||||||||||| |||  |||||||| ||||  ||||||||||||| | ||| || |||| ||||||| |||||    
T  4264386 cttttaatttaaataagtggttttcacatatatcaagtttttcattttgtgttttttg-tgatttcgtcgtcggagtgagatgttgcgttgttcgtcgtc 4264484  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 497  Q
    |||| |||   ||||||||||||||| || ||| |||||| ||||||||  ||||||||||||| ||||| ||||| ||| ||| |||  |||||||    
T  4264485 ttgtgcgg---tgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaagatcaacttcagtcaattacagatttaatcaatgattt 4264578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 517
Target Start/End: Complemental strand, 31210781 - 31210581
Alignment:
Q  313 ataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgtt 412  Q
    ||||||| ||| || || |||||||| ||||||||||||| |||| |||||||||||||||  ||||| ||||||||||||  | ||||||| |||||||    
T  31210781 ataagtggttttcacatctatcaagttttttcttttgtgtttttt-atgatttcgtcgtctaagtgcggcgttgtgttgtttgttgtcttgtgcggcgtt 31210683  T
Q  413 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgt 512  Q
       ||||||||||| || | ||||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   |||||||||||| ||| ||||     
T  31210682 ---tgatttcgcgtcttatcgtggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgc 31210586  T
Q  513 agatc 517  Q
    |||||    
T  31210585 agatc 31210581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 399
Target Start/End: Original strand, 36691788 - 36691885
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||||||||||||||||| |||| | ||||||||||| ||||||||||||| ||||| ||||||||||||||  ||||| |||| |||||||||||||    
T  36691788 ctttcaatctaaataagtggtttc-acatatatcaagttttttcttttgtgttttttcgtgatttcgtcgtctaagtgcggcgttttgttgttcatcgt 36691885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 360 - 523
Target Start/End: Original strand, 1415529 - 1415689
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||  || |||||||||||||||| ||||||||| |||||||   |||||||||||||||| | ||||||| |||  ||  ||||||||    
T  1415529 tgatttcgtcgtctaagtacgacgttgtgttgttcttcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaa 1415625  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    |||| || ||| ||||| ||| ||||||   ||||||||| || ||| |||| |||||||||||    
T  1415626 gatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaag 1415689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 463
Target Start/End: Original strand, 4099017 - 4099175
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  | ||||||||||||  ||||| ||||||||||||| | |||    
T  4099017 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgt-tttttgtaatttcgtcgtctaagtgcggcgttgtgttgttcgttgtc 4099115  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||| ||||   ||||||||| ||||||||| ||||||||| ||  |||  ||||||||||||    
T  4099116 ttgtgcggc---gtttgattttgcgttttgtcgtggtgtttgttcagttcctattgaaagatc 4099175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 7448161 - 7448379
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||| || ||| || || |||||||| ||| ||||||||| ||||  ||||||||| ||||  ||||| ||||||||||||| |||||    
T  7448161 ctttcaatctaaataaatggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtc 7448259  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   ||||||||||||||||||| | | ||||| ||  ||   | ||||||||||  | ||| ||||| ||||||||||   || |||||||    
T  7448260 ttgtgcggc---gtttgatttcgcgttttgtcgcgatgtttgttcagtgcctcttgaaagatctacatcagtcaattacatattcaaccaataatttgga 7448356  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  7448357 cgtcaacgttgcagatccggaag 7448379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 301 - 412
Target Start/End: Complemental strand, 4041780 - 4041670
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  |||||||||| |||  ||||| ||||||||||||| |||||    
T  4041780 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcttctaagtgcgtcgttgtgttgttcgtcgtc 4041682  T
Q  401 ttgtacggcgtt 412  Q
    ||||||||||||    
T  4041681 ttgtacggcgtt 4041670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 301 - 511
Target Start/End: Original strand, 14423236 - 14423445
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||||  ||||| ||||||||||| ||||||| ||| | ||||| |||||||||| |||   || |||  | |||| ||| |||||    
T  14423236 ctttcaatctaaataagtgggttccacatatatcaagt-ttttcttgtgttttttttcttgatttcgtcatcttaatgtgacaatatgttattcgtcgtc 14423334  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| |  |||||||||||||| | |||| ||| ||||||| |||||||  ||||||||||||  ||| | ||||| ||| ||| |||  ||||||||||    
T  14423335 ttgtgcatcgttgtttgatttcacattttattgcggtgtttgtttggttcttattgaaagatcgactttagtcaattacagatttaatcaatgatttgga 14423434  T
Q  501 cgccaatgttg 511  Q
    || ||| ||||    
T  14423435 cgtcaacgttg 14423445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 295 - 519
Target Start/End: Original strand, 31788364 - 31788584
Alignment:
Q  295 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 394  Q
    ||||| ||||||||||||||||||||||| || || ||||||||  || ||||||||| ||||  | ||||||||||||  |||||||||| ||||||||    
T  31788364 cattttctttcaatctaaataagtgattttcacatctatcaagttgttccttttgtgtttttttgtaatttcgtcgtctaagtgcgacgttttgttgttc 31788463  T
Q  395 atcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatga 494  Q
     | ||||||| ||||   ||||||||| || | |||| | ||||||| ||  |||  ||||||||||||    ||||||||| ||| ||||||   ||||    
T  31788464 gttgtcttgtgcggc---gtttgattt-gcatcttgtcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatga 31788559  T
Q  495 tttggacgccaatgttgtagatccg 519  Q
    |||||||| ||| |||| |||||||    
T  31788560 tttggacgtcaacgttgcagatccg 31788584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 9169443 - 9169226
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||  ||||  ||||||||||||||  ||||| ||||||||||||| | |||    
T  9169443 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg--tttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgttgtc 9169346  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||   |||| |||||||||| |||||||  | | ||||| || ||||  | ||||||||||  | ||| | ||| ||| ||||||   ||||||||||    
T  9169345 ttgt---gcgtcgtttgatttcacgttttgccgcgatgtttgttcggttcctcttgaaagatctacatcagtgaattacaaattcaacgaatgatttgga 9169249  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  9169248 cgtcaacgttgcagatccggaag 9169226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 502
Target Start/End: Complemental strand, 23933806 - 23933608
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    ||||||||||||||||||| || || ||||||||| | |||||  |||||| ||||| ||||||  |||| || | ||||| |||||||| |  | ||||    
T  23933806 tttcaatctaaataagtgactttcacatatatcaatttttttc--ttgtgttttttcgtgattttttcgtttgagcgcgacattgtgttggttgttgtct 23933709  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
    ||| ||| ||||||||| || || | |||||| ||||||  |||||||  ||||||||| ||| ||||| ||||||||| |||||||  || ||||||||    
T  23933708 tgtgcggtgttgtttgaatttgcatcttgttgcggtgttcgtttggttcttattgaaagttcaacttcagtcaatcacagattcaatcaattatttggac 23933609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 441
Target Start/End: Original strand, 7646387 - 7646523
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||| ||||||||||||| ||| || || || ||||| ||| ||||||||| || |  ||||||||||||||  ||||| |||| |||||||| |||||    
T  7646387 ctttcgatctaaataagtggttttcacatctaccaagtttttccttttgtgttttctg-tgatttcgtcgtctaagtgcggcgttatgttgttcgtcgtc 7646485  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 441  Q
    |||| ||||   ||||||||||||||||||| |||||||||    
T  7646486 ttgtgcggc---gtttgatttcgcgttttgtcgtggtgttt 7646523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 461
Target Start/End: Complemental strand, 11985416 - 11985260
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||| ||| || ||||||||||| ||||||||||||| ||||  ||||||||||||||  ||||| | ||||||||||  | |||    
T  11985416 ctttcaatttaaataagtggttttcacatatatcaagttttttcttttgtgtgtttt-gtgatttcgtcgtctaagtgcggctttgtgttgtttgttgtc 11985318  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaaga 461  Q
    |||| ||||   ||||||||| |||| |||| | |||||| |||| |||  ||||||||||    
T  11985317 ttgtgcggc---gtttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaaga 11985260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 523
Target Start/End: Complemental strand, 27097585 - 27097374
Alignment:
Q  307 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 406  Q
    |||||||||||||||||| | |  |||||||| ||| ||||||||| ||||| ||||||||||||||  ||||| ||||||||||||| ||||||||| |    
T  27097585 atctaaataagtgatttc-acaactatcaagtttttccttttgtgttttttc-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgc 27097488  T
Q  407 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 506  Q
    |||    ||||||||| | |||||| | ||||||| ||  |||  | ||||||||||  | ||| ||||| ||| ||||||   |||||||||||| |||    
T  27097487 ggc---atttgatttcaccttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaa 27097391  T
Q  507 tgttgtagatccggaag 523  Q
     |||| ||||| |||||    
T  27097390 cgttgcagatctggaag 27097374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 1421589 - 1421808
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgt-tttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||||||||||||||||| ||| || || |||||| | | ||| |||||||| ||||  ||||||||||||||  |||||  ||| |||||||| ||||    
T  1421589 ctttcaatctaaataagtggttttcacatctatcaattttattttttttgtgttttttg-tgatttcgtcgtctaagtgcggtgttatgttgttcgtcgt 1421687  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    ||||| | |||||   ||||||||||| |||| | ||||||| |   |||  ||||||||||||  | ||||||||| ||| ||||||   |||||||||    
T  1421688 cttgtgcagcgtt---tgatttcgcgtcttgtcgcggtgtttgtccagtttctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgg 1421784  T
Q  500 acgccaatgttgtagatccggaag 523  Q
    ||| ||| |||| |||||||||||    
T  1421785 acgtcaacgttgcagatccggaag 1421808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 289 - 519
Target Start/End: Complemental strand, 30400235 - 30400007
Alignment:
Q  289 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatg-atttcgtcgtctgtgtgcgacgttgt 387  Q
    ||||||| ||| |||| |||||||||||||| ||| || |||||||||   ||||||| ||||| ||||  |  ||||||||||||  ||||||| ||||    
T  30400235 ttttttctttttcttttaatctaaataagtgtttttcacatatatcaaaatttttcttctgtgtttttttttttatttcgtcgtctaagtgcgacattgt 30400136  T
Q  388 gttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaa 487  Q
    ||||||| ||||||||| ||||    |||||||| || |  ||| | ||||||  ||| |||  ||||||||||||| ||||| ||||| ||| ||||||    
T  30400135 gttgttcttcgtcttgtgcggc---atttgattttgcatcgtgtcgcggtgttcgtttagttcctattgaaagatcaacttcagtcaattacaaattcaa 30400039  T
Q  488 ttgatgatttggacgccaatgttgtagatccg 519  Q
    |  ||||||||| || ||| |||| |||||||    
T  30400038 tcaatgatttgggcgtcaacgttgcagatccg 30400007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 34128813 - 34128712
Alignment:
Q  362 atttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaaga 461  Q
    ||||||||||||| |||||  ||| |||||||| ||||||||| || ||||||||||||  |||| |||||||||||||| |||||||  |||| |||||    
T  34128813 atttcgtcgtctgagtgcggtgttatgttgttcgtcgtcttgtgcgacgttgtttgattgtgcgtcttgttgtggtgtttgtttggttcctattaaaaga 34128714  T
Q  462 tc 463  Q
    ||    
T  34128713 tc 34128712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 4778667 - 4778885
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||| ||| || || |||||||| ||| | ||||||| ||||  |||||||||||| |  ||||| ||||||||| ||| |||||    
T  4778667 ctttcaatttaaataagtggttttcacatctatcaagtttttccctttgtgttttttt-tgatttcgtcgtttaagtgcggcgttgtgttattcgtcgtc 4778765  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| | |||||   |||||||||||||| | | ||||||||||   ||  | ||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  4778766 ttgtgcagcgtt---tgatttcgcgttttctcgcggtgtttattcaattcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 4778862  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  4778863 cgtcaacgttgcagatccggaag 4778885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 301 - 510
Target Start/End: Original strand, 6436521 - 6436726
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||| ||||||||||||||||| || | |||| |||| |||||||||     ||||| ||||||| | ||||| ||| |  ||||||| |||| |||||    
T  6436521 ctttcgatctaaataagtgattttcacacatataaagttttttctttttatctttttcgtgatttcatggtctgagtgtggtgttgtgt-gttcgtcgtc 6436619  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| || ||||   |||||| || | |||||  ||||||  | ||||| ||| |||||||||||||||| ||||||| |||||||||  ||||||||||    
T  6436620 ttgtgcgacgtt---tgattttgcatcttgttacggtgttcgtctggttcataatgaaagatcagcttcagtcaatcaaatattcaatcaatgatttgga 6436716  T
Q  501 cgccaatgtt 510  Q
    || |||||||    
T  6436717 cgtcaatgtt 6436726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 463
Target Start/End: Complemental strand, 5428052 - 5427896
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||  |||| | || |||||||| ||||||||||||| |||   |||||||||||||   ||||| |||| |||||||| |||||    
T  5428052 ctttcaatctaaataagttttttc-acatctatcaagttttttcttttgtgtttttg--tgatttcgtcgtccaagtgcggcgttttgttgttcgtcgtc 5427956  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    ||||  ||||||   ||||||||||| |||| | ||||||| ||| ||| |||||| ||||||    
T  5427955 ttgtgtggcgtt---tgatttcgcgtcttgtcgcggtgtttgtttagttcatattggaagatc 5427896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 519
Target Start/End: Complemental strand, 7678057 - 7677845
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||  ||| ||| |||||| || ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  7678057 ctttcaatctaaataagtggttttcacatctat--agtttttccttttgagttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 7677961  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   |||||||||||||| || |   ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  7677960 ttgtgcggc---gtttgatttcgcgtcttatctcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 7677864  T
Q  501 cgccaatgttgtagatccg 519  Q
    |  ||| |||| |||||||    
T  7677863 catcaacgttgcagatccg 7677845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 402
Target Start/End: Complemental strand, 29173905 - 29173805
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||| ||||||||| ||| || |||| ||| || ||| ||||||||| ||||  ||||||||||||||  ||||| |||||||||||||||||||    
T  29173905 ctttcaatccaaataagtggttttcacatatttcaggtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcatcgtc 29173807  T
Q  401 tt 402  Q
    ||    
T  29173806 tt 29173805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 33923615 - 33923837
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttctttt---gtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatc 397  Q
    |||||||| |||||||||| ||| || | |||| |||| |||||||||   || | ||||  ||||||||| ||||  || ||| ||| |||||||| ||    
T  33923615 ctttcaatttaaataagtggttttcacacatattaagttttttctttttttgtttttttttgtgatttcgttgtctaagtacgatgttctgttgttcgtc 33923714  T
Q  398 gtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 497  Q
    ||||||| |||||||   |||||||||||||| | ||||||||| |||  ||  ||||||||||||  | ||| ||||| ||| ||||||   |||||||    
T  33923715 gtcttgtgcggcgtt---tgatttcgcgttttatcgtggtgtttgtttatttcctattgaaagatcgacatcagtcaattacaaattcaaccaatgattt 33923811  T
Q  498 ggacgccaatgttgtagatccggaag 523  Q
    || || ||| |||| |||||||||||    
T  33923812 gggcgtcaacgttgaagatccggaag 33923837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 463
Target Start/End: Complemental strand, 36943309 - 36943149
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttt-tgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||||||||||||||||  ||| || || |||||||| |||| ||| | | | ||||  ||||||||||||||  ||||| ||||||||||||| ||||    
T  36943309 ctttcaatctaaataagtagttttcacatctatcaagttttttttttgtttttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgt 36943210  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    ||||| ||||   |||||||||||||| |||| | ||||||| ||| |||   |||||||||||    
T  36943209 cttgtgcggc---gtttgatttcgcgtattgtcgcggtgtttgtttagttccaattgaaagatc 36943149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 306 - 464
Target Start/End: Original strand, 35220245 - 35220398
Alignment:
Q  306 aatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgta 405  Q
    |||||||||||||| ||| || ||| ||||||| |||| | |||||| ||||  ||||||||||||||  ||||| | || ||||||||||||||||||     
T  35220245 aatctaaataagtggttttcacataaatcaagtttttt-tcttgtgttttttg-tgatttcgtcgtctaagtgcggcattatgttgttcatcgtcttgtg 35220342  T
Q  406 cggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    ||||   ||||||||| |||||||||   |||||| |||| |||  |||||||||||||    
T  35220343 cggc---gtttgattttgcgttttgtcacggtgttcatttagttcctattgaaagatca 35220398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 499
Target Start/End: Original strand, 41694618 - 41694729
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 486  Q
    |||||||  ||||||||||||| ||||||| ||||||| | |||||| |||||||  ||||||  | |||||||||||||||||  |||| |||||||||    
T  41694618 tgttgtttgtcgtcttgtacggtgttgtttaatttcgcctcttgttgcggtgttt-cttggttcctgttgaaagatcagcttcagccaattacatattca 41694716  T
Q  487 attgatgatttgg 499  Q
    ||  |||||||||    
T  41694717 atcaatgatttgg 41694729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 385 - 463
Target Start/End: Complemental strand, 459347 - 459269
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||| ||||| |||||||||||| |||||||||||||  ||| |||||| |||||| ||||| || |||||||||||||    
T  459347 tgtgctgttcgtcgtcttgtacgacgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatc 459269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 267 - 409
Target Start/End: Complemental strand, 19062572 - 19062431
Alignment:
Q  267 ctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttc 366  Q
    |||||||||||| ||   || |||||| | ||| ||||||||||||||||||| ||| || || |||||||| ||| ||||| ||| ||||  |||| ||    
T  19062572 ctagaatcacccctctacatcctttttcccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttatgt-tttttgtgatatc 19062474  T
Q  367 gtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggc 409  Q
    |||||||  ||||  ||||||||||||| ||||||||| ||||    
T  19062473 gtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggc 19062431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 384 - 502
Target Start/End: Complemental strand, 28534061 - 28533943
Alignment:
Q  384 ttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatat 483  Q
    |||||||||||  |||||||| || ||||||||||||||   | |||||| ||||||  |||| ||  ||||||||||  ||||||| ||||||||| ||    
T  28534061 ttgtgttgttcgccgtcttgtgcgacgttgtttgatttcaaatcttgttgcggtgttcgtttgattcctattgaaagacaagcttcactcaatcacagat 28533962  T
Q  484 tcaattgatgatttggacg 502  Q
    |||||  ||||||||||||    
T  28533961 tcaataaatgatttggacg 28533943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 391
Target Start/End: Complemental strand, 29279756 - 29279667
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttg 391  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| ||||||||| ||||  ||||||||||||||   |||| ||||||||||    
T  29279756 ctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgt-tttttgtgatttcgtcgtctaattgcggcgttgtgttg 29279667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 18763381 - 18763600
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttca-tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||||||||||||||||| ||| || ||  ||||||| || |||||||||| ||||   ||||||| ||||||  |||||  |||||||||||| ||||    
T  18763381 ctttcaatctaaataagtggttttcacatg-atcaagttttctcttttgtgttttttttgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgt 18763479  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    ||||| |||||||   ||||||||||| || |   ||||||  ||| |||  |||||||||||| || ||||||||| ||| ||||||   || ||||||    
T  18763480 cttgtgcggcgtt---tgatttcgcgtcttatcacggtgttcgtttagttcctattgaaagatcggcatcaatcaattacaaattcaaccaatcatttgg 18763576  T
Q  500 acgccaatgttgtagatccggaag 523  Q
     || ||| |||  |||||||||||    
T  18763577 gcgtcaacgttacagatccggaag 18763600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 19596073 - 19596013
Alignment:
Q  289 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgt 350  Q
    |||||||||||| ||||||| |||||||||||||| || |||||||||||||||| ||||||    
T  19596073 ttttttcatttc-tttcaatgtaaataagtgattttcacatatatcaagtgttttattttgt 19596013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 502
Target Start/End: Complemental strand, 36175574 - 36175485
Alignment:
Q  413 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacg 502  Q
    |||||||| ||||| |||||| ||||||  |||||||  ||||||||||||| | |||| |||| |||||||||||  ||||||||||||    
T  36175574 gtttgattccgcgtcttgttgcggtgttcgtttggtttctattgaaagatcaacatcaaacaattacatattcaatcaatgatttggacg 36175485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 500
Target Start/End: Original strand, 37416702 - 37416819
Alignment:
Q  383 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacata 482  Q
    |||||||||||| ||||||||| || |||||||||||||| | | |||||||  ||||   |||||| ||||||||| |||| ||  | ||||||||| |    
T  37416702 gttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcacatcttgttgtaatgttcggttggttcatattgaaatatcaactcgagtcaatcacaga 37416801  T
Q  483 ttcaattgatgatttgga 500  Q
    ||||||  ||||||||||    
T  37416802 ttcaatcaatgatttgga 37416819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 462
Target Start/End: Complemental strand, 37614198 - 37614121
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||||||||| ||||||||| || |||||||||||||  ||| |||||| |||||| ||||| || ||||||||||||    
T  37614198 tgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagat 37614121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 3725190 - 3725266
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| | ||||||||||||||||||||||||| ||| ||  |||||||||  |||| || |||||||||||||    
T  3725190 tgttgttcgttgtcttgtacggcgttgtttgatttctcgtctttgtgtggtgttcgtttgattcatattgaaagatc 3725266  T

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Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 8805876 - 8805952
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| || |||||||||||||| ||| ||  ||||||||| ||||| || |||||||||||||    
T  8805876 tgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttcatttgattcatattgaaagatc 8805952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 27249222 - 27249146
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  27249222 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 27249146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 464
Target Start/End: Original strand, 27949438 - 27949513
Alignment:
Q  389 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||| ||||||||||||||||||||||||||| ||| || ||| | |||| ||||| || |||| |||||||||    
T  27949438 ttgttcgtcgtcttgtacggcgttgtttgatttcccgtcttcttgcgatgttcatttgattcatatcgaaagatca 27949513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 463
Target Start/End: Original strand, 36234020 - 36234094
Alignment:
Q  389 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  36234020 ttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 36234094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 9986413 - 9986337
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  || |||||| ||||| || |||||||||||||    
T  9986413 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9986337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 31128965 - 31128864
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| ||||||||  ||||  |||||||||| | |   |||| ||||||||||||  |||||    
T  31128965 ctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtg--tttttgtgatttcgtcatttaattgcggcgttgtgttgttagtcgtc 31128868  T
Q  401 ttgt 404  Q
    ||||    
T  31128867 ttgt 31128864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 31580660 - 31580584
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||| ||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  31580660 tgttgttcgtcgtcttgtgcggcgttgttttatttcccgtattcgtgcggtgttcatttgatttatattgaaagatc 31580584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 34598997 - 34599073
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||||||||||| ||||||||||||||||  | | ||  || |||||| ||||| || |||||||||||||    
T  34598997 tgttgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatc 34599073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 488
Target Start/End: Original strand, 11812701 - 11812780
Alignment:
Q  409 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 488  Q
    ||||||||||||| | || |||||| |||||||||||| ||  ||| ||||||||||||||| || || ||| |||||||    
T  11812701 cgttgtttgattttgtgtcttgttgcggtgtttatttgattcctatagaaagatcagcttcagtcgattacagattcaat 11812780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 459
Target Start/End: Original strand, 24587687 - 24587790
Alignment:
Q  356 ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatatt 455  Q
    ||||||||||||| ||||| ||||| |  |||| | ||| |||||||||   |||||| |||||||| ||| |||||| |||||| |||| ||| |||||    
T  24587687 ttcatgatttcgttgtctgagtgcggcaatgtgatattcgtcgtcttgtgtagcgttgattgatttctcgtattgttgcggtgttcatttagttcatatt 24587786  T
Q  456 gaaa 459  Q
    ||||    
T  24587787 gaaa 24587790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 402
Target Start/End: Complemental strand, 25237345 - 25237298
Alignment:
Q  355 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 402  Q
    |||||||||||||||||||  |||||||||||| |||||| |||||||    
T  25237345 tttcatgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctt 25237298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 462
Target Start/End: Original strand, 30420688 - 30420763
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  || |||||| ||||| || ||||||||||||    
T  30420688 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagat 30420763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 523
Target Start/End: Original strand, 17151445 - 17151555
Alignment:
Q  413 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgt 512  Q
    |||||||||||| | |||||  ||||||  |||| ||  |||||||||||||  |||| ||||| ||| |||||||  ||||||||| || | | |||||    
T  17151445 gtttgatttcgcatcttgttacggtgttcgtttgattcctattgaaagatcaatttcagtcaattacagattcaatcaatgatttgggcgtcgacgttgt 17151544  T
Q  513 agatccggaag 523  Q
    |||||||||||    
T  17151545 agatccggaag 17151555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 18108021 - 18107983
Alignment:
Q  201 tttctctctaagttttctttctctttcagtcgttgagga 239  Q
    |||||||||||||||||||||||||||| || |||||||    
T  18108021 tttctctctaagttttctttctctttcattcattgagga 18107983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 487
Target Start/End: Complemental strand, 28871866 - 28871792
Alignment:
Q  413 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaa 487  Q
    |||||||||||||| |||| | ||||||  |||||||  ||||||||||||| ||||| ||||| ||| ||||||    
T  28871866 gtttgatttcgcgtcttgtcgcggtgttcgtttggttcctattgaaagatcaacttcagtcaattacagattcaa 28871792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 16261268 - 16261328
Alignment:
Q  291 ttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgt 352  Q
    |||||||||| |||||||||||||||||| |||||| |||| | |||| | |||||||||||    
T  16261268 ttttcatttc-tttcaatctaaataagtggtttccacatatttaaagtttattcttttgtgt 16261328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 401
Target Start/End: Original strand, 16375872 - 16375960
Alignment:
Q  310 taaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    ||||||| |||||| || ||||||||||| ||||||| |||   ||||  ||||||| |||||||  |||| | ||||||||||||||||||    
T  16375872 taaataaatgattttcacatatatcaagttttttcttgtgt---tttttgtgatttcatcgtctgaatgcggcattgtgttgttcatcgtct 16375960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 465
Target Start/End: Original strand, 23903376 - 23903480
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||   |||| ||||||  ||||  |||| |||| |||||||||||||| ||  | ||||||||||| || ||||| || |||||||||    
T  23903376 tgatttcgtcgtctaaatgcgtcgttgttgtgtttgtcgt-ttgtgcggcgttgtttgatatcttgctttgttgtggtattcatttgattcatattgaaa 23903474  T
Q  460 gatcag 465  Q
    ||||||    
T  23903475 gatcag 23903480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 2808543 - 2808467
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||  ||| || ||| | |||| || || || |||||||||||||    
T  2808543 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttgcgatgttcatctgattcatattgaaagatc 2808467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 459
Target Start/End: Complemental strand, 7015782 - 7015710
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  || |||||| ||||| || |||||||||    
T  7015782 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaa 7015710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 355 - 473
Target Start/End: Complemental strand, 7443585 - 7443465
Alignment:
Q  355 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc-ttgtacggcgttgtttg-atttcgcgttttgttgtggtgtttatttggttaat 452  Q
    |||| |||||||| |||||  |||||||||||| |||||| ||||| |||| || |||||||||  ||||  ||||||||  ||| ||| || |||| |     
T  7443585 tttcgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcag 7443486  T
Q  453 attgaaagatcagcttcaatc 473  Q
    |||| ||||||||||||||||    
T  7443485 attgtaagatcagcttcaatc 7443465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 489
Target Start/End: Complemental strand, 18107848 - 18107749
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 486  Q
    |||||||| ||||||||| |||||||   |||||||||||  || || ||||||  ||||||| ||||||| |||| | | ||| ||||||||| |||||    
T  18107848 tgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcatgctgcggtgttcgtttggttcatattgagagataaacctcactcaatcacagattca 18107752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 465
Target Start/End: Original strand, 18113881 - 18113957
Alignment:
Q  389 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcag 465  Q
    ||||| || ||||||| ||||||||||||||||  ||| || ||| |||||| || ||||| ||||||||| |||||    
T  18113881 ttgtttatggtcttgtgcggcgttgtttgattttccgtcttattgcggtgttaatatggttcatattgaaatatcag 18113957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 421
Target Start/End: Complemental strand, 20145876 - 20145797
Alignment:
Q  341 tttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgattt 421  Q
    |||||||| ||| ||||||||||||  ||||||| ||| | ||||||||||||  | ||||||| ||||||||||| ||||    
T  20145876 tttctttt-tgttttttcatgattttatcgtctgagtgtggcgttgtgttgttggttgtcttgtgcggcgttgtttaattt 20145797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 26025481 - 26025405
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    ||||| || ||||||||| ||||||||||||||||  ||| || ||| |||||| ||||| || || ||||||||||    
T  26025481 tgttggtcgtcgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttgaaagatc 26025405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 385
Target Start/End: Complemental strand, 28871948 - 28871864
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgtt 385  Q
    |||||||| |||||||||||||| || | ||||||||| |||  |||||||| |||   ||||||||| ||||| ||||| ||||    
T  28871948 ctttcaatttaaataagtgattttcacacatatcaagtttttcattttgtgtttttatgtgatttcgttgtctgagtgcggcgtt 28871864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 6e-60; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 301 - 518
Target Start/End: Original strand, 29921956 - 29922173
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||||   ||||    
T  29921956 ctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtc 29922055  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||  | ||| |||||||||||||| |||||| ||||| ||||| ||| |||||||||||||| |||||| ||||||||||||||||  ||||||||||    
T  29922056 ttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttgga 29922155  T
Q  501 cgccaatgttgtagatcc 518  Q
    || ||| |||| ||||||    
T  29922156 cgtcaacgttgcagatcc 29922173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 301 - 518
Target Start/End: Original strand, 29971109 - 29971326
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||||   ||||    
T  29971109 ctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtc 29971208  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||  | ||| |||||||||||||| |||||| ||||| ||||| ||| |||||||||||||| |||||| ||||||||||||||||  ||||||||||    
T  29971209 ttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttgga 29971308  T
Q  501 cgccaatgttgtagatcc 518  Q
    || ||| |||| ||||||    
T  29971309 cgtcaacgttgcagatcc 29971326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 303 - 519
Target Start/End: Original strand, 35175304 - 35175521
Alignment:
Q  303 ttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||| |||| | | ||||||||||||| || |||| ||||||||||||||||||    
T  35175304 ttcaatctaaacaagtgatttccacatatatcaagtgttttcttttgtgtttttttcgtaatttcgtcgtctgagtacgacattgtgttgttcatcgtct 35175403  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
    ||| | |||||||||||||||  || |||||| ||||||  ||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  35175404 tgtgcagcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatattcaatcaatgatttggac 35175503  T
Q  502 gccaatgttgtagatccg 519  Q
      ||| |||| |||||||    
T  35175504 atcaacgttgcagatccg 35175521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 303 - 506
Target Start/End: Complemental strand, 12947464 - 12947258
Alignment:
Q  303 ttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt---catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||   | |||||||||||| || ||||| | ||||||||||| ||||    
T  12947464 ttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgtttttttttcgtgatttcgtcgtttgagtgcggctttgtgttgttcgtcgt 12947365  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    ||||| ||||||||||||||||||| | |||||||||||||  ||||||| ||||||||| |||| ||||| ||||||| | ||||||| ||||||||||    
T  12947364 cttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttggttcatattgaaatatcaacttcagtcaatcatagattcaatcgatgatttgg 12947265  T
Q  500 acgccaa 506  Q
    |||||||    
T  12947264 acgccaa 12947258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 307 - 519
Target Start/End: Original strand, 29239247 - 29239460
Alignment:
Q  307 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgta 405  Q
    |||||||||| |||||| || ||||||   |||||||||||||||| |||| | ||||||| ||||||| ||||| ||||||||||||| |||||||||     
T  29239247 atctaaataaatgattttcacatatattcggtgttttcttttgtgtttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtg 29239346  T
Q  406 cggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcca 505  Q
    ||||| ||||||||||| ||| |||||||||||||  |||||||  ||||| ||||||||||||| ||||||||| ||| |||  |||||||||||| |     
T  29239347 cggcgctgtttgatttcacgtcttgttgtggtgttcgtttggttcgtattggaagatcagcttcagtcaatcacagatttaatcaatgatttggacgtcg 29239446  T
Q  506 atgttgtagatccg 519  Q
    | ||||||||||||    
T  29239447 acgttgtagatccg 29239460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 301 - 502
Target Start/End: Original strand, 53508124 - 53508326
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||||||| || ||||||||||| ||||||| ||||| ||||| |||||||||||||||  |||| ||||||||||||| |||||    
T  53508124 ctttcaatataaataagtgattttcacatatatcaagttttttcttctgtgttttttcgtgatttcgtcgtctgaatgcggcgttgtgttgttcgtcgtc 53508223  T
Q  401 ttgtacggcgttgtttgattt-cgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    |||||||  |||||||||||| | ||||||||||  |||||  |||||||  |||||||||||||  | || | ||||||| |||||||  |||||||||    
T  53508224 ttgtacgatgttgtttgatttccccgttttgttgcagtgttcgtttggttcctattgaaagatcaaatccagttaatcacagattcaatcaatgatttgg 53508323  T
Q  500 acg 502  Q
    |||    
T  53508324 acg 53508326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 301 - 499
Target Start/End: Original strand, 51487004 - 51487207
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaa-gtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    |||||||||||||||||||||||  ||||| ||||| || |||||||  |||| ||||| |||||||||| |||  ||| ||||||||||||||| ||||    
T  51487004 ctttcaatctaaataagtgatttttatatacatcaaagttttttcttgcgtgttttttcgtgatttcgtcatcttagtgggacgttgtgttgttcgtcgt 51487103  T
Q  400 cttgtacggcgttgtttgatttcg--cgttttgt--tgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgat 495  Q
    ||||| ||||||||||||||||||    ||||||  |||||||||| ||||||| |||||||||||||| ||||   |||||||| |||||||| |||||    
T  51487104 cttgtgcggcgttgtttgatttcgtatcttttgttgtgtggtgtttttttggttcatattgaaagatcaacttcggacaatcacagattcaattaatgat 51487203  T
Q  496 ttgg 499  Q
    ||||    
T  51487204 ttgg 51487207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 302 - 506
Target Start/End: Original strand, 4821713 - 4821911
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||||||||||||| || ||||||| ||     |||||||||||||||||| || |||||||||| ||||||  |||||  ||||| |||||| ||||||    
T  4821713 tttcaatctaaataggttatttccacat-----aagtgttttcttttgtgttttctcatgatttcatcgtctaagtgcggtgttgtattgttcgtcgtct 4821807  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
    |||  | | ||||||||||| |||| |||||| ||||||  ||||||| |||||||||||||||||| | |||||||||||||||||  |||||||||||    
T  4821808 tgt-tgacattgtttgattttgcgtcttgttgcggtgttcgtttggttcatattgaaagatcagcttgagtcaatcacatattcaatccatgatttggac 4821906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 307 - 523
Target Start/End: Original strand, 14859396 - 14859611
Alignment:
Q  307 atctaaataagtgatt-tc-catatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 404  Q
    |||||||||||||||| || || ||||||||||| ||||||||||||  ||||  |||||||| |||||| |||||  |||||||||||| || ||||||    
T  14859396 atctaaataagtgattatcacacatatatcaagttttttcttttgtgactttttgtgatttcgccgtctgagtgcggtgttgtgttgttcgtcatcttgt 14859495  T
Q  405 acggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcc 504  Q
      | | ||   | |||| || | |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||| |    
T  14859496 gtgacatt---taattttgcatcttgttgcggtgttcatttggttcatattgaaagatcagcttcaatcaatcacatattcaatcaatgatttggacgtc 14859592  T
Q  505 aatgttgtagatccggaag 523  Q
    || |||| |||||| ||||    
T  14859593 aacgttgcagatccagaag 14859611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 36461616 - 36461398
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||| || || |||||||| ||||||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  36461616 ctttcaatctaaataagtgattttcacatctatcaagttttttcttttgtgt-tttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 36461518  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   |||||||||||||| |||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  36461517 ttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtttgttctgttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 36461421  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||  ||||| |||||    
T  36461420 cgtcaacgttacagatctggaag 36461398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 287 - 517
Target Start/End: Original strand, 16235307 - 16235541
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttc-catatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgtt 385  Q
    ||||||||| |||  ||||||||||||||||||||||  || ||| ||||||| |||||||| |||| ||||| ||||||| ||||||  ||||||||||    
T  16235307 tcttttttccttttttttcaatctaaataagtgatttttcacatacatcaagt-ttttctttcgtgttttttcgtgatttcatcgtcttagtgcgacgtt 16235405  T
Q  386 gtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgt----tgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacat 481  Q
    |||||||||  |||||||| ||||||||||||||||||| |||| |    ||||||| |  |||||||  ||||||||||| || || |  ||||||||     
T  16235406 gtgttgttcgccgtcttgtgcggcgttgtttgatttcgcattttttgttgtgtggtgctcgtttggttcgtattgaaagattagttttagacaatcacaa 16235505  T
Q  482 attcaattgatgatttggacgccaatgttgtagatc 517  Q
    |||||||  ||||||||| || ||| |||| |||||    
T  16235506 attcaatcaatgatttgggcgtcaacgttgcagatc 16235541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 301 - 497
Target Start/End: Complemental strand, 21290006 - 21289807
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||| |||||||||||||  | ||| ||||||| |||||||| |||| ||||  ||||||||||||||  ||||||||||||| ||||| | |||    
T  21290006 ctttcaatccaaataagtgattttaacatacatcaagt-ttttctttcgtgtttttttgtgatttcgtcgtcttagtgcgacgttgtggtgttcgttgtc 21289908  T
Q  401 ttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 496  Q
    |||| |||||||||||||||| ||   |||||||||  ||||||  |||||||  |||||||||||||||||||  |||||||| |||||||  ||||||    
T  21289907 ttgtgcggcgttgtttgattttgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatt 21289808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 380
Target Start/End: Complemental strand, 50194567 - 50194390
Alignment:
Q  202 ttctctctaagttttctttctctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtattcttttttcatttcc 301  Q
    |||||||||||||||| |||||||||| |||| ||| ||| |  |||||||||||       || ||| |||||||  || | || |||||| | ||  |    
T  50194567 ttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcatttttt-gacctaaaatcacctctctgcatcctttttcccttctc 50194469  T
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcg 380  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  50194468 tttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgagtgcg 50194390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 301 - 422
Target Start/End: Original strand, 42460650 - 42460766
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||| |||| ||||| ||||||||||||||  |||||   |||||||||||||||||    
T  42460650 ctttcaatctaaataagtgatttccacatacatcaagt-ttttctttcgtgt-ttttcgtgatttcgtcgtcttagtgcg---ttgtgttgttcatcgtc 42460744  T
Q  401 ttgtacggcgttgtttgatttc 422  Q
    |||| |||||||||||||||||    
T  42460745 ttgtgcggcgttgtttgatttc 42460766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 310 - 497
Target Start/End: Complemental strand, 27706409 - 27706219
Alignment:
Q  310 taaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggc 409  Q
    |||||||||||||| || ||| ||||  | |||||||| |||| ||||| ||||||||||||||  ||| ||||||||||||||| ||||||||| ||||    
T  27706409 taaataagtgattttcacatacatcagat-ttttctttcgtgttttttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcgtcttgtgcggc 27706311  T
Q  410 gttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 497  Q
    ||||||| |||||||   |||||||||  ||||||  |||||||  |||||||||||||||||  | |||||||| |||||||  |||||||    
T  27706310 gttgtttaatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttttaacaatcacaaattcaatcaatgattt 27706219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 307 - 511
Target Start/End: Complemental strand, 53808045 - 53807837
Alignment:
Q  307 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcat-----gatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    ||||||||||||||||| || | |||||| | |||||||||||||| ||||  |     |||||||||||||  ||||||| ||||||||||| ||||||    
T  53808045 atctaaataagtgattttcacaaatatcaggcgttttcttttgtgttttttttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtct 53807946  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
    | | |||| ||||||||||| || | ||||||  |||||  || |||| |||||||||||||| ||||| ||||||||| |||||||  |||||||||||    
T  53807945 tctgcggcattgtttgatttggcatcttgttgctgtgttcgtt-ggttcatattgaaagatcaacttcagtcaatcacagattcaatcaatgatttggac 53807847  T
Q  502 gccaatgttg 511  Q
    | ||| ||||    
T  53807846 gtcaacgttg 53807837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 43488775 - 43488557
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||||| ||||||| ||||  ||||||||||||||  ||| | ||||||||||||| |||||    
T  43488775 ctttcaatctaaataagtggttttcacatctatcaagttttttcatttgtgttttttg-tgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtc 43488677  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   |||||||||||||| |||||| ||||||| ||  |||  |||||||| ||| || | ||||||| | | ||||||   |||||||| |    
T  43488676 ttgtgcggc---gtttgatttcgcgtcttgttgcggtgtttgttcagtttctattgaaatatctgcattaatcaattataaattcaagcaatgatttgaa 43488580  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  43488579 cgtcaacgttgcagatccggaag 43488557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 517
Target Start/End: Complemental strand, 4396517 - 4396307
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| ||||||||||||||||| ||     |||||||||||||||||  |||| | ||||||||| || |  ||||  |||||||||||  |||||    
T  4396517 ctttcaatttaaataagtgatttccacat-----aagtgttttcttttgtgctttttga-gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtc 4396424  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||  ||||||||||||||| |||  |||||| ||||||  |||| || |||||||||||| ||||||| ||||||| | ||||||| ||| |||| ||    
T  4396423 ttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatcatagattcaatcgataattttga 4396324  T
Q  501 cgccaatgttgtagatc 517  Q
    |  |||||||| |||||    
T  4396323 catcaatgttgcagatc 4396307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 6954881 - 6954663
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||||  || || || |||||||| |||  |||||||| ||||  ||||||||||||||  ||||| |||||| |||||| |||||    
T  6954881 ctttcaatctaaataagtgggtttcacatctatcaagtttttcattttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtattgttcgtcgtc 6954783  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   |||||||||||||||||||   ||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  6954782 ttgtgcggc---gtttgatttcgcgttttgtcacggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 6954686  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||||| || |||||||||||    
T  6954685 cgtcaatgctgcagatccggaag 6954663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 347 - 486
Target Start/End: Original strand, 7546555 - 7546699
Alignment:
Q  347 ttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc---gttttgttgt--ggtgttt 441  Q
    |||||| ||||| ||||||||||||||  ||||||||||||||||||| ||||||||| |||||||||||||||||||     ||||||||  ||||||     
T  7546555 ttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcaatcctttgttgtgcggtgttc 7546654  T
Q  442 atttggttaatattgaaagatcagcttcaatcaatcacatattca 486  Q
     |||||||  |||||||||||||| ||||  |||||||| |||||    
T  7546655 gtttggttcgtattgaaagatcagtttcagacaatcacaaattca 7546699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 523
Target Start/End: Original strand, 8914618 - 8914833
Alignment:
Q  311 aaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcg 410  Q
    ||||||| ||||| || ||| ||||||| |||||||| |||  ||||| ||||||||||||||  ||||||| ||||||||||| ||||||||| |||||    
T  8914618 aaataagggattttcacatacatcaagt-ttttctttcgtgctttttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcg 8914716  T
Q  411 ttgtttgatttcg--cgttttgttgtg--gtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 506  Q
     |||||||||| |    |||| |||||  |||||  |||||||  ||||||||||| |||||||  |||||||| |||||||  ||||||||| || |||    
T  8914717 ctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaa 8914816  T
Q  507 tgttgtagatccggaag 523  Q
     |||| |||||| ||||    
T  8914817 cgttgcagatccagaag 8914833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 501
Target Start/End: Original strand, 44804934 - 44805129
Alignment:
Q  308 tctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt---catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 404  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||||   | |||||| |||||||  ||| | |||||||| ||| |  || ||||    
T  44804934 tctaaataagtgatttccacatatatcaagtgttttcttctgtgtttttttttcgtgattttgtcgtctaggtgtggcgttgtgt-gtttactgttttgt 44805032  T
Q  405 acggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
     ||||||||||| ||||| ||| |||||| ||||||  ||||||  ||||||||| |||| | ||| |||||||||||| ||||  || ||||||||    
T  44805033 gcggcgttgtttaatttcacgtcttgttgcggtgttcgtttggtgcatattgaaatatcatcctcagtcaatcacatatgcaatcaataatttggac 44805129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 355 - 523
Target Start/End: Original strand, 51923676 - 51923848
Alignment:
Q  355 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggtta 450  Q
    |||| ||||||||||||||  ||| ||||||||||||||| || |||||| ||||||| |||||||| || |  ||||||||  ||||||  |||||||     
T  51923676 tttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcatcttgtgcggcgttatttgattttgcatcatttgttgtgcggtgttcgtttggttc 51923775  T
Q  451 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
     |||||||||||||||||||  ||||| || |||||||  |||||||||||| ||| |||| |||||| ||||    
T  51923776 gtattgaaagatcagcttcagacaatcgcaaattcaatcaatgatttggacgtcaacgttgcagatccagaag 51923848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 354 - 478
Target Start/End: Original strand, 41818164 - 41818287
Alignment:
Q  354 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaata 453  Q
    ||||| ||||||| |||| || ||||||| ||||||||||| ||||||||| |||  |||||||||||||||| |||||||| ||||  ||| |||  ||    
T  41818164 ttttcgtgatttcatcgtatgagtgcgacattgtgttgttcgtcgtcttgtgcggtattgtttgatttcgcgtcttgttgtgatgttcgttt-gttccta 41818262  T
Q  454 ttgaaagatcagcttcaatcaatca 478  Q
    ||||||||||| |||||||||||||    
T  41818263 ttgaaagatcaacttcaatcaatca 41818287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 47042237 - 47042015
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatg--atttcgtcgtctgtgtgcgacgttgtgttgttcatcg 398  Q
    |||||||| |||||||||||||| || |||||||| || ||||||||| | | ||||  ||  ||||||||||||  || |||||||||||||||| |||    
T  47042237 ctttcaatttaaataagtgattttcacatatatcatgttttttcttttttctttttttttgtgatttcgtcgtctaagtacgacgttgtgttgttcgtcg 47042138  T
Q  399 tcttgtacggcgttgtttgatttcgcg-ttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 497  Q
    |||||| ||||   ||||||||||||| |||||| | |||||| ||||  ||  ||||||||||||||| ||| ||| | ||| ||||||   ||| |||    
T  47042137 tcttgtgcggc---gtttgatttcgcgtttttgtagcggtgttcatttatttcctattgaaagatcagcatcagtcagttacaaattcaaccaatggttt 47042041  T
Q  498 ggacgccaatgttgtagatccggaag 523  Q
    || || ||| |||| |||||||||||    
T  47042040 gggcgtcaacgttgaagatccggaag 47042015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 301 - 441
Target Start/End: Original strand, 10108140 - 10108275
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| ||  | |||||||| ||| ||||||||| |||   ||||||||||||||  ||||| ||||||||||||| |||||    
T  10108140 ctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgtttttg--tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 10108237  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 441  Q
    |||| ||||   ||||||||||||||||||| | |||||||    
T  10108238 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgttt 10108275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 301 - 441
Target Start/End: Original strand, 10232974 - 10233109
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| ||  | |||||||| ||| ||||||||| |||   ||||||||||||||  ||||| ||||||||||||| |||||    
T  10232974 ctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgtttttg--tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 10233071  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 441  Q
    |||| ||||   ||||||||||||||||||| | |||||||    
T  10233072 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgttt 10233109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 348 - 499
Target Start/End: Original strand, 32246393 - 32246544
Alignment:
Q  348 tgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttgg 447  Q
    ||||| ||||| ||||||| ||||||| ||||||  || |||||||  |||| |||| || |||||||||||| ||||| |||||| | |||| | ||||    
T  32246393 tgtgttttttcgtgatttcatcgtctgagtgcgaaattatgttgtttgtcgttttgtgcgacgttgtttgattccgcgtcttgttgcgctgttcacttgg 32246492  T
Q  448 ttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    ||  ||||||||||||| ||||| | |||||||||||||||  |||||||||    
T  32246493 ttcctattgaaagatcaacttcagttaatcacatattcaatcaatgatttgg 32246544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 499
Target Start/End: Complemental strand, 7805592 - 7805475
Alignment:
Q  382 cgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacat 481  Q
    ||||||||||||| ||||||| |||||| ||||||| |||||| | ||  ||||||||||||||||||  || | |||||||||||||| ||| |||||     
T  7805592 cgttgtgttgttcgtcgtcttatacggcattgtttgttttcgcatgttaatgtggtgtttatttggttcctactaaaagatcagcttcagtcattcacaa 7805493  T
Q  482 attcaattgatgatttgg 499  Q
    ||||||| | ||||||||    
T  7805492 attcaatcggtgatttgg 7805475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 463
Target Start/End: Original strand, 9998371 - 9998528
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| ||  | |||||||| |||  |||||||| |||   ||||||||||||||  ||||| ||||||||||||| |||||    
T  9998371 ctttcaatctaaataagtggttttcacgtctatcaagtttttcattttgtgtttttg--tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 9998468  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||| ||||   ||||||||||||||||||| | ||||||| ||| |||  | ||||||||||    
T  9998469 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgtttagttcctcttgaaagatc 9998528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 302 - 516
Target Start/End: Complemental strand, 20465154 - 20464944
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    ||||||| ||||||||||||||  | ||||||||||| ||| ||||||||| ||||  ||||||| ||||||  ||| |  |||||||||||| ||||||    
T  20465154 tttcaatataaataagtgattttaacatatatcaagtttttccttttgtgt-tttttgtgatttcatcgtctaagtgaggtgttgtgttgttcgtcgtct 20465056  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
    ||||||||   ||||||||| |||| |||| | |||||| ||||   |  ||||||||||||   |||| ||||| ||| |||||||  ||||||||| |    
T  20465055 tgtacggc---gtttgattttgcgtcttgtcgcggtgttcatttaaatcctattgaaagatcgatttcagtcaattacaaattcaataaatgatttgggc 20464959  T
Q  502 gccaatgttgtagat 516  Q
    | |||||||| ||||    
T  20464958 gtcaatgttgcagat 20464944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 305 - 463
Target Start/End: Complemental strand, 21533990 - 21533836
Alignment:
Q  305 caatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 404  Q
    ||||||||||||||| ||| || || |||||||| ||||||| | | | ||||  ||||||||| |||| |||||| ||||||||||||| |||||||||    
T  21533990 caatctaaataagtggttttcacatctatcaagttttttcttgtattttttttg-tgatttcgttgtctatgtgcggcgttgtgttgttcgtcgtcttgt 21533892  T
Q  405 acggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||   ||||| |||||||| |||| | ||||||| ||| |||  ||||||||||||    
T  21533891 acggc---gtttggtttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatc 21533836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 47896055 - 47896273
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || ||||||||||| ||||||||||||| ||||  |||||||||||||   ||| | ||||||||||||| | |||    
T  47896055 ctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgt-tttttgtgatttcgtcgtcaaagtgtggcgttgtgttgttcgttgtc 47896153  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   |||||||||| ||| |||| | ||| ||| ||| |||  |||||||||||   | ||| ||||| ||| ||||||   |||||||||     
T  47896154 ttgtgcggc---gtttgatttcacgtcttgtcgcggtatttgtttagttcctattgaaagatttacatcagtcaattacaaattcaaccaatgatttggg 47896250  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    ||  ||||||| | |||||||||    
T  47896251 cgtaaatgttgcatatccggaag 47896273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 486
Target Start/End: Original strand, 29249215 - 29249317
Alignment:
Q  384 ttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatat 483  Q
    |||||||||||||||| |||| | ||||| ||||||||||  | || |||||||||| ||||| || || ||||||||||||||||| |||||| |||||    
T  29249215 ttgtgttgttcatcgttttgtgcagcgttctttgatttcgaatcttattgtggtgttcatttgattcatcttgaaagatcagcttcagtcaatcgcatat 29249314  T
Q  484 tca 486  Q
    |||    
T  29249315 tca 29249317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 355 - 523
Target Start/End: Complemental strand, 51303782 - 51303610
Alignment:
Q  355 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggtta 450  Q
    |||| |||||||||||| |  ||||||||||||||||||  ||||||| |  || |||||||||||||||   |||||||||  ||||||  |||||||     
T  51303782 tttcgtgatttcgtcgttttagtgcgacgttgtgttgtttgtcgtcttatgaggtgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttt 51303683  T
Q  451 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
     ||||||||||||||||||   |||||||| |||||||  ||||||||| || ||| |||| |||||| ||||    
T  51303682 gtattgaaagatcagcttctgacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaag 51303610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 301 - 458
Target Start/End: Original strand, 22290841 - 22290998
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||| |||||||||||||||||| || |||||| || | ||| ||||||||| ||||||||||||||| ||| | |||   |||||||||||||| ||||    
T  22290841 cttttaatctaaataagtgattttcacatatattaaatttttccttttgtgttttttcatgatttcgtagtccgagtgtatcgttgtgttgttcaccgtc 22290940  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 458  Q
    ||||     |||||||||||| || | |||||| ||||||  |||||||  |||||||    
T  22290941 ttgtgtcatgttgtttgattttgcatcttgttgcggtgttcgtttggttcttattgaa 22290998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 502
Target Start/End: Original strand, 10229380 - 10229576
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| ||  | |||||||| ||| ||||||||| |||   |||||||||| |||  ||||| ||||||||||||| || ||    
T  10229380 ctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgtttttg--tgatttcgtcttctaagtgcggcgttgtgttgttcgtcatc 10229477  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   ||||||||||||||||||| | ||||||| ||  |||  | ||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  10229478 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 10229574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 463
Target Start/End: Original strand, 40487228 - 40487387
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttca-tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||||||||||||||||| ||| ||  | | |||||| ||||||||| ||||||||   ||||||||||||||  ||||| ||||||||||||| ||||    
T  40487228 ctttcaatctaaataagtggttttcacttctttcaagt-ttttctttt-tgtattttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgt 40487325  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    ||||| ||||||  ||||||||||||| |||| | ||||||| ||  |||  ||||||||||||    
T  40487326 cttgtgcggcgt--tttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatc 40487387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 52923302 - 52923084
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||   ||||| |||||||  ||| | || |||||||||| |||||    
T  52923302 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtctttt-gggattttgtcgtctaagtgtggcgctgtgttgttcgtcgtc 52923204  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   ||||||||||||||||||| | ||||||| ||  |||  | ||||||||||    | | ||||| ||| ||||||   ||||||||||    
T  52923203 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctatattagtcaattacaaattcaaccaatgatttgga 52923107  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  52923106 cgtcaacgttgcagatccggaag 52923084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 444 - 523
Target Start/End: Complemental strand, 628969 - 628890
Alignment:
Q  444 ttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||  |||||||||||  ||| ||||||||||| ||||    
T  628969 ttggttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgtagatccagaag 628890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 331 - 523
Target Start/End: Original strand, 32701426 - 32701612
Alignment:
Q  331 tatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttg 430  Q
    |||||||| ||| ||||||||| ||||  || |||||||||||  ||||| |||||| ||||   ||||||||| |||||||   |||||||||||||||    
T  32701426 tatcaagtttttccttttgtgttttttg-tgctttcgtcgtctaagtgcggcgttgtattgtg--tcgtcttgtgcggcgtt---tgatttcgcgttttg 32701519  T
Q  431 ttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||| | ||||| ||  |||  ||||||||||||  | |||| |||| ||| |||||||  ||||||||| || ||| ||||||||||||||||    
T  32701520 ttgcgatgtttgttcagttcctattgaaagatctacatcaaccaattacaaattcaatcaatgatttgggcgtcaacgttgtagatccggaag 32701612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 502
Target Start/End: Complemental strand, 35865119 - 35864920
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatt--ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcg 398  Q
    ||||||||||||||||||  ||| || ||||||||||| ||||||||||||| ||  ||  ||||||||||||||   |||| ||||||||||||  |||    
T  35865119 ctttcaatctaaataagtagttttcacatatatcaagt-ttttcttttgtgttttaatttgtgatttcgtcgtctaattgcggcgttgtgttgttagtcg 35865021  T
Q  399 tcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 498  Q
    ||||||  ||||||   |||||| |||| || | | ||||||  ||| |||  ||||||||||||  | ||||||||| ||| |||||||  ||||||||    
T  35865020 tcttgtgtggcgtt---tgattttgcgtcttttcgcggtgttcgtttagttcctattgaaagatcgacatcaatcaattacaaattcaatcaatgatttg 35864924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 517
Target Start/End: Complemental strand, 48650919 - 48650707
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||  ||||||| ||| || || |||||||| ||| ||||||||| ||||  |||||| |||||||  ||||| | ||||||||||| | |||    
T  48650919 ctttcaatctgtataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgattttgtcgtctaagtgcggcattgtgttgttcgttgtc 48650821  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| |||| ||   ||||||||||| |||| | ||||||| ||  |||  |||||||||||| || ||||||||| ||| ||||||   || |||||||    
T  48650820 ttgtgcggcatt---tgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctgcatcaatcaattacaaattcaaccaataatttgga 48650724  T
Q  501 cgccaatgttgtagatc 517  Q
    || ||| |||| |||||    
T  48650723 cgtcaacgttgcagatc 48650707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 441
Target Start/End: Original strand, 9319961 - 9320096
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||||||| ||||||||| ||| || || |||||||| ||| ||||||||| |||| |||||||||| ||||   |||| | ||||||||||| ||||||    
T  9319961 tttcaatcaaaataagtggttttcacatctatcaagtttttccttttgtgtttttt-atgatttcgttgtctaaatgcggcattgtgttgttcgtcgtct 9320059  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgttt 441  Q
    ||| || ||||   |||||| |||||||||||| ||||||    
T  9320060 tgtgcgacgtt---tgattttgcgttttgttgtcgtgttt 9320096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 412
Target Start/End: Original strand, 21431522 - 21431638
Alignment:
Q  295 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 394  Q
    ||||| ||||||||||||||||||| ||| || || |||||||| |||  |||||||| ||||  |||||||| |||||  ||||| | |||||||||||    
T  21431522 cattttctttcaatctaaataagtggttttcacatctatcaagtttttctttttgtgt-tttttgtgatttcgccgtctaagtgcggcattgtgttgttc 21431620  T
Q  395 atcgtcttgtacggcgtt 412  Q
     ||||||||| |||||||    
T  21431621 gtcgtcttgtgcggcgtt 21431638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 487
Target Start/End: Complemental strand, 26739477 - 26739360
Alignment:
Q  370 gtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttc 469  Q
    ||||| |||| ||| |||||||||||| ||||||| |||||| ||||||||| || | |||||||| ||| | |||||||  ||||||||||| | ||||    
T  26739477 gtctgagtgcaacgctgtgttgttcattgtcttgtgcggcgtcgtttgattttgcatcttgttgtgatgtctgtttggttcctattgaaagattaacttc 26739378  T
Q  470 aatcaatcacatattcaa 487  Q
     |||||||| | ||||||    
T  26739377 gatcaatcatagattcaa 26739360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 463
Target Start/End: Complemental strand, 38860304 - 38860147
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||  ||||||||| ||| || || |||||||| ||||| ||||||| |||   ||||||||||||||  |||||||||| |||||||| |||||    
T  38860304 ctttcaattcaaataagtggttttcacatctatcaagttttttcctttgtgtttttg--tgatttcgtcgtctaagtgcgacgttttgttgttcgtcgtc 38860207  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||| ||||   | |||||||||||| |||| | ||||||| ||| |||  ||||| ||||||    
T  38860206 ttgtgcggc---gattgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatc 38860147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 431
Target Start/End: Complemental strand, 45568629 - 45568504
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||  ||| || || |||||||| ||||||||| ||| |||   ||||||||||||||  ||||| ||||||||||||| |||||    
T  45568629 ctttcaatctaaataagttgttttcacatctatcaagttttttcttttctgtttttg--tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 45568532  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgt 431  Q
    ||||  |||   |||||||||||||| ||||    
T  45568531 ttgtgtggc---gtttgatttcgcgtcttgt 45568504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 440
Target Start/End: Original strand, 25842634 - 25842714
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtt 440  Q
    |||||| ||||| || |||||||||||||||||||||| |||| | |||  |||||||||||| ||| |||||||||||||    
T  25842634 tgattttgtcgtttgagtgcgacgttgtgttgttcatcatcttctgcggtattgtttgatttctcgtcttgttgtggtgtt 25842714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 33579759 - 33579827
Alignment:
Q  289 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt 357  Q
    ||||| ||||| ||||||||||||||||||||||| || ||||||| ||| ||||||||||||| ||||    
T  33579759 tttttccattttctttcaatctaaataagtgattttcacatatatctagttttttcttttgtgtttttt 33579827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 50194374 - 50194302
Alignment:
Q  451 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||||||||||| |||||||| ||||||||| ||||||| |||||||||||||  || |||| |||||||||||    
T  50194374 atattgaaagaccagcttcagtcaatcacagattcaatcgatgatttggacgttaacgttgcagatccggaag 50194302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 463
Target Start/End: Original strand, 3606738 - 3606837
Alignment:
Q  364 ttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    ||||||||||| ||||| | ||||||||||| |||||||||  |||||||| |||| || ||| |||||||||||||  ||||||   ||||||||||||    
T  3606738 ttcgtcgtctgagtgcggcattgtgttgttcgtcgtcttgtgtggcgttgtatgatatcccgtcttgttgtggtgttcgtttggtatctattgaaagatc 3606837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 480
Target Start/End: Original strand, 52496934 - 52497005
Alignment:
Q  409 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcaca 480  Q
    |||||||||||||| ||| |||||| ||||||  |||| ||  |||||||||||||||||||||||||||||    
T  52496934 cgttgtttgatttcacgtattgttgaggtgttcgtttgattcttattgaaagatcagcttcaatcaatcaca 52497005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 310 - 412
Target Start/End: Original strand, 40556624 - 40556725
Alignment:
Q  310 taaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggc 409  Q
    |||||||||| ||| ||||| |||||||| ||  ||||||||| || |  ||||||||||||||  ||||| ||||||||||||| ||||||||| ||||    
T  40556624 taaataagtggttttcatatctatcaagttttcccttttgtgttttatg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc 40556722  T
Q  410 gtt 412  Q
    |||    
T  40556723 gtt 40556725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 463
Target Start/End: Original strand, 54148892 - 54149053
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgt-gtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||||||||||||||||| ||| || || |||||||| |||||||||||  | ||||  ||||||||||||||  ||||| | ||||||||||| ||||    
T  54148892 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtattttttttgtgatttcgtcgtctaagtgcggcattgtgttgttcgtcgt 54148991  T
Q  400 ct-tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    ||  || ||||    ||||||||||||| |||| | ||||||| ||| |||  ||||||||||||    
T  54148992 ctaagtgcggc---atttgatttcgcgtattgtcgcggtgtttgtttagttcctattgaaagatc 54149053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 464
Target Start/End: Original strand, 22803025 - 22803102
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||| ||||||| | ||||||||||||||||| ||| | |||| |||||| ||||| || ||||||||||||||    
T  22803025 tgttgttcgtcgtcttatgcggcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatca 22803102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 464
Target Start/End: Original strand, 36906125 - 36906202
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  ||| ||||| ||||| || ||||||||||||||    
T  36906125 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtagtgttcatttgattcatattgaaagatca 36906202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 432
Target Start/End: Complemental strand, 36910826 - 36910699
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||| ||||| ||||  |||||||| | |||  ||||| |||| |||||||| |||||    
T  36910826 ctttcaatctaaataagtggttttcacatctatcaagtttttccttctgtgtttttttgtgatttcg-cctctaagtgcggcgttttgttgttcgtcgtc 36910728  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgtt 432  Q
    |||| ||||   |||||||||||||| |||||    
T  36910727 ttgtgcggc---gtttgatttcgcgtcttgtt 36910699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 519
Target Start/End: Original strand, 38545760 - 38545916
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||  || |||||||||||||||| ||||||||| ||||   |||||||||||||| |||| | ||||||| |||  ||   |||||||    
T  38545760 tgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtttgtttattttccattgaaa 38545856  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccg 519  Q
    ||||  | ||| ||||| ||| ||||||   ||||||||| || ||| |||| |||||||    
T  38545857 gatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccg 38545916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 402
Target Start/End: Complemental strand, 52116187 - 52116093
Alignment:
Q  310 taaataagtgatttccatatatatcaagtgttttcttttgtg---tattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 402  Q
    |||||||||||||| || ||||||||||| ||||||||||||   | |||||||||||||||||||| | ||||  | |||||||||| |||||||    
T  52116187 taaataagtgattttcacatatatcaagttttttcttttgtgtttttttttcatgatttcgtcgtct-tatgcggtgctgtgttgttcgtcgtctt 52116093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 463
Target Start/End: Original strand, 1649323 - 1649480
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || ||||||||||  ||||||| | |   ||||  ||||||||||||||| ||| | |||||| ||||||  ||||    
T  1649323 ctttcaatctaaataagtggttttcacatatatcaaga-ttttcttgttt---tttttgtgatttcgtcgtctgagtgtggcgttgtattgttctccgtc 1649418  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||| ||| |||| |||||||||||| ||||||  |||||  ||| |||  ||||||||||||    
T  1649419 ttgtgcggtgttg-ttgatttcgcgtcttgttgatgtgttcttttagttcctattgaaagatc 1649480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 9797714 - 9797501
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| | | ||||||||| ||||  ||||||||||||||  |||||     | ||||||| |||||    
T  9797714 ctttcaatctaaataagtggttttcacatctatcaagtttctacttttgtgt-tttttgtgatttcgtcgtctaagtgcg-----gcgttgttcgtcgtc 9797621  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   ||||||||| |||| |||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   |||||||| |    
T  9797620 ttgtgcggc---gtttgattttgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgaa 9797524  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    ||  || |||| |||||||||||    
T  9797523 cgttaacgttgcagatccggaag 9797501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 373
Target Start/End: Complemental strand, 20987984 - 20987913
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtct 373  Q
    |||||||| |||||||||||||| || ||||||| ||| ||||||||||||| ||||  ||||||||||||||    
T  20987984 ctttcaatttaaataagtgattttcaaatatatcgagttttttcttttgtgt-tttttgtgatttcgtcgtct 20987913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 459
Target Start/End: Original strand, 21488094 - 21488166
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    |||||||  ||||||||| ||||||||||||||||| ||| || ||| |||||||||||| || |||||||||    
T  21488094 tgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgtttatttgattcatattgaaa 21488166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 35499269 - 35499193
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  35499269 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 35499193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 46934645 - 46934721
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||| ||||||||||||| ||| || ||| |||||| ||||| || |||||||||||||    
T  46934645 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatc 46934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 49552295 - 49552219
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||| |||||| ||| |||||| ||||  || | |||||||||||    
T  49552295 tgttgttcgtcgtcttgtgcggcgttgtttgatttctcgttttcttgcggtgttcattttattcacattgaaagatc 49552219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 463
Target Start/End: Complemental strand, 36734765 - 36734687
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||| ||||||||| ||||||||||||||||  ||| || ||| |||||| ||||| || ||| |||||||||    
T  36734765 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgattcataatgaaagatc 36734687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 4019695 - 4019752
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc-ttgtacggcgttgttt 416  Q
    ||||||||||||||  ||||||||||||||||||| ||||| |||| |||||||||||    
T  4019695 tgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgtgcggcgttgttt 4019752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 288 - 431
Target Start/End: Complemental strand, 12149982 - 12149843
Alignment:
Q  288 cttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgt 387  Q
    |||||||  ||| |||| || ||||||||||| |||  | ||||||| ||| ||| |||||||| |||||  |||||||||| |||  ||||| ||||||    
T  12149982 ctttttttcttttcttttaagctaaataagtggtttttacatatatccagtttttgcttttgtg-atttttgtgatttcgtcatctaagtgcggcgttgt 12149884  T
Q  388 gttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgt 431  Q
     |||||||||||||||| | ||   |||||||||||||| ||||    
T  12149883 attgttcatcgtcttgtgcagc---gtttgatttcgcgtcttgt 12149843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 29921857 - 29921898
Alignment:
Q  202 ttctctctaagttttctttctctttcagtcgttgaggagggg 243  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  29921857 ttctctctaagttttctttctctttcattcgtcgaggagggg 29921898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 29971010 - 29971051
Alignment:
Q  202 ttctctctaagttttctttctctttcagtcgttgaggagggg 243  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  29971010 ttctctctaagttttctttctctttcattcgtcgaggagggg 29971051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 31271989 - 31271885
Alignment:
Q  304 tcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttg 403  Q
    ||||||||||||| || ||| || || |||||||| ||||||||||||| ||||  ||||||| ||||||  |||||   ||||||||||| ||||||||    
T  31271989 tcaatctaaataaatggttttcacatttatcaagttttttcttttgtgt-tttttgtgatttcttcgtctaagtgcggttttgtgttgttcgtcgtcttg 31271891  T
Q  404 tacggc 409  Q
    | ||||    
T  31271890 tgcggc 31271885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 413 - 502
Target Start/End: Original strand, 48199788 - 48199877
Alignment:
Q  413 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacg 502  Q
    |||||||||||  | |||||||||||||  |||||||  ||||||||||||| ||||||||||| | | ||| |||  ||||||||||||    
T  48199788 gtttgatttcgtatcttgttgtggtgttcgtttggttcctattgaaagatcaacttcaatcaattataaatttaatcaatgatttggacg 48199877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 4178568 - 4178644
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||| ||||||||||||| ||||||||||| ||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  4178568 tgtttttcatcgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaaagatc 4178644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 412
Target Start/End: Complemental strand, 12050832 - 12050723
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||| |||||| ||||||| ||| || || |||||||| || |||||||||| |||   ||||||||||||||  | ||| |||| |||||||| |||||    
T  12050832 ctttaaatctagataagtggttttcacatctatcaagttttatcttttgtgtttttg--tgatttcgtcgtctaagcgcggcgttttgttgttcgtcgtc 12050735  T
Q  401 ttgtacggcgtt 412  Q
    |||| |||||||    
T  12050734 ttgtgcggcgtt 12050723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 12116101 - 12116177
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| | ||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  12116101 tgttgttcgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 12116177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 25162439 - 25162515
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||| | | ||  || |||||| ||||| || |||||||||||||    
T  25162439 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttgtttcatattgaaagatc 25162515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 42719520 - 42719596
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  || |||||| ||||| || |||||||||||||    
T  42719520 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 42719596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 462
Target Start/End: Original strand, 32607472 - 32607547
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||||||| |||||||||  |||||||||||||||| ||| ||  || |||||| ||||| || ||||||||||||    
T  32607472 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagat 32607547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 412
Target Start/End: Original strand, 37040669 - 37040782
Alignment:
Q  295 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 394  Q
    ||||| ||||||||||||||||||| ||| || |||   ||||||||| ||||||||| ||||  |||||| |||||||  || | ||| ||||||| ||    
T  37040669 cattttctttcaatctaaataagtggttttcacata---caagtgtttccttttgtgt-tttttgtgattttgtcgtctaagtacaacgctgtgttggtc 37040764  T
Q  395 atcgtcttgtacggcgtt 412  Q
     ||||||||| |||||||    
T  37040765 gtcgtcttgtgcggcgtt 37040782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 441
Target Start/End: Complemental strand, 43564837 - 43564758
Alignment:
Q  362 atttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 441  Q
    ||||||||||||| || ||||  |||| |||||||||| |||| ||| |||| |||||||| ||| ||||||| ||||||    
T  43564837 atttcgtcgtctgagtacgacactgtgatgttcatcgttttgtgcggtgttgattgatttcacgtcttgttgtagtgttt 43564758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 463
Target Start/End: Complemental strand, 44960128 - 44959979
Alignment:
Q  310 taaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggc 409  Q
    |||||||||| ||| || || ||| |||| ||| ||||| ||| ||||  ||||||||||||||  |||||  ||||| || ||| ||||||||| ||||    
T  44960128 taaataagtggttttcacatctattaagtttttccttttatgttttttg-tgatttcgtcgtctaagtgcggtgttgtattattcgtcgtcttgtgcggc 44960030  T
Q  410 gttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||   |||||| ||||||||| ||||||||| ||  |||  ||||||||||||    
T  44960029 gtt---tgattttgcgttttgtcgtggtgtttgttcagtttttattgaaagatc 44959979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 499
Target Start/End: Complemental strand, 7887523 - 7887434
Alignment:
Q  412 tgtttgatttcgcgttttgttgtg--gtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    ||||||||||||| | ||||||||  |||||  ||| |||  ||||||||||||| |||||  ||||||||||||| ||| |||||||||    
T  7887523 tgtttgatttcgcatcttgttgtgcggtgttcgtttagttcctattgaaagatcaacttcagacaatcacatattcgattaatgatttgg 7887434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 463
Target Start/End: Original strand, 31794072 - 31794150
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||| |||| |||| ||||||||||||||||    | |||||| |||||| ||||| || |||||||||||||    
T  31794072 tgtgttgttcgtcgttttgtgcggcgttgtttgattttctatcttgttgcggtgttcatttgattcatattgaaagatc 31794150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 333
Target Start/End: Complemental strand, 7887594 - 7887562
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatat 333  Q
    ||||||||||||||||||||||||||| |||||    
T  7887594 ctttcaatctaaataagtgatttccatgtatat 7887562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 412
Target Start/End: Original strand, 18010922 - 18011033
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaa-gtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||| ||||||| ||||| ||| || ||||||||| || ||| ||||||||| ||||  ||||| |||  |||  ||| |||||||||||||||||| |    
T  18010922 ctttcgatctaaaaaagtggttttcacatatatcaaagtttttccttttgtgttttttg-tgattccgttatctaagtgtgacgttgtgttgttcatcat 18011020  T
Q  400 cttgtacggcgtt 412  Q
    ||||| |||||||    
T  18011021 cttgtgcggcgtt 18011033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 25631597 - 25631521
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    ||||||||  |||||||| ||||||||||| ||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  25631597 tgttgttctccgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaaagatc 25631521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 4e-58; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 10332737 - 10332515
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||  || || |||||||||||||||  |||||    
T  10332737 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgttttttcgtgattttgtcgcatgagtacgacgttgtgttgtttgtcgtc 10332638  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| |||| |||||||||||||||| ||||||  |||||| |||| || |||||||||||| ||  ||| |||||||||||||| || |||||||| ||    
T  10332637 ttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaaagattaggctcagtcaatcacatattcgatcgatgatttaga 10332538  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    | |||| |||| |||||||||||    
T  10332537 caccaacgttgcagatccggaag 10332515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 28541098 - 28540873
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||| || ||| ||||||| |||||||| |||| ||||| ||||||| ||||||  ||||||||||||||||||| |||||    
T  28541098 ctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcgtgatttcatcgtcttagtgcgacgttgtgttgttcgtcgtc 28541000  T
Q  401 ttgtacggcgttgtttgatttcgcgt--tttgt--tgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 496  Q
    |||| ||||||||||||||||||| |  |||||  |||||||||  |||||||  ||||||||||| |||||||  |||||||| |||||||  ||||||    
T  28540999 ttgtgcggcgttgtttgatttcgcatcatttgttgtgtggtgttcgtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatt 28540900  T
Q  497 tggacgccaatgttgtagatccggaag 523  Q
    ||| || ||| |||| |||||| ||||    
T  28540899 tgggcgtcaacgttgcagatccagaag 28540873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 2979498 - 2979273
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||| || ||| ||||||| |||||||| |||| ||||| ||||||||||||||  ||||||||||||||||||| |||||    
T  2979498 ctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc 2979400  T
Q  401 ttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 496  Q
    |||| ||||||||||| ||| ||| |  ||| ||||  ||||||  |||||||  |||| |||||||| |||||  |||||||| |||||||  ||||||    
T  2979399 ttgtgcggcgttgtttcattccgcatccttttttgtgcggtgttcgtttggttcgtattaaaagatcaacttcagacaatcacaaattcaatcaatgatt 2979300  T
Q  497 tggacgccaatgttgtagatccggaag 523  Q
    ||| || ||| |||| |||||| ||||    
T  2979299 tgggcgtcaacgttgcagatccagaag 2979273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 287 - 518
Target Start/End: Complemental strand, 8088412 - 8088184
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttca-tgatttcgtcgtctgtgtgcgacgtt 385  Q
    |||||||||  || ||||| ||||||||||||||||| || | |||||||  |||||||||||||| ||||   ||||||||||   |  ||||||| ||    
T  8088412 tcttttttctctttctttcgatctaaataagtgattttcacaaatatcaaacgttttcttttgtgttttttttgtgatttcgtc---taagtgcgacctt 8088316  T
Q  386 gtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattc 485  Q
    |||||||| |||||||||| |||||||||||||||| || | ||||||  |||||  || |||| |||||||||||||||||||| ||||||||| ||||    
T  8088315 gtgttgtttatcgtcttgtgcggcgttgtttgatttggcatcttgttgcagtgttcgtt-ggttcatattgaaagatcagcttcagtcaatcacagattc 8088217  T
Q  486 aattgatgatttggacgccaatgttgtagatcc 518  Q
    |||  |||||||||||| ||| |||| ||||||    
T  8088216 aatcaatgatttggacgtcaacgttgcagatcc 8088184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 301 - 520
Target Start/End: Complemental strand, 24229970 - 24229754
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||| || || ||||||||  |||||||||||| ||||  |||||||||| |||  ||||| |||| |||||||| |||||    
T  24229970 ctttcaatctaaataagtgattttcacatctatcaagttgtttcttttgtgtttttttgtgatttcgtcatctaagtgcggcgttttgttgttcgtcgtc 24229871  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||   | |  |||||||||||||| |||| | ||||||| ||| |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  24229870 ttgt---gtgacgtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 24229774  T
Q  501 cgccaatgttgtagatccgg 520  Q
    || |||||||| ||||||||    
T  24229773 cgtcaatgttgcagatccgg 24229754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 19103659 - 19103434
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||| ||||||||||||||||| || ||| ||||||| ||||||||  ||| ||||| ||||||||||||||  ||||||||||||||||||  |||||    
T  19103659 ctttcgatctaaataagtgattttcacatacatcaagt-ttttctttcatgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttagtcgtc 19103561  T
Q  401 ttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 496  Q
    |||| ||||||||||||||||| | |  ||||||||  ||||||  |||| ||  ||| ||||||| |||||||  |||||||| |||||||  ||||||    
T  19103560 ttgtgcggcgttgtttgatttcacatcatttgttgtgcggtgttcgtttgattcgtatcgaaagattagcttcagacaatcacaaattcaatcaatgatt 19103461  T
Q  497 tggacgccaatgttgtagatccggaag 523  Q
    ||| || |||| ||| |||||| ||||    
T  19103460 tgggcgtcaatattgcagatccagaag 19103434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 38597700 - 38597918
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||||||| || || |||||||| ||| ||||||||  ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  38597700 ctttcaatttaaataagtgattttcacatctatcaagtttttccttttgtgctttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 38597798  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| |||||||   ||||||||||| |||| ||||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  38597799 ttgtgcggcgtt---tgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 38597895  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  38597896 cgtcaacgttgcagatccggaag 38597918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 301 - 424
Target Start/End: Original strand, 39567198 - 39567320
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||| || ||| ||||||| |||||||| |||| ||||| |||| |||||||||  ||||||||||||||||||| | |||    
T  39567198 ctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcgtgatctcgtcgtcttagtgcgacgttgtgttgttcgttgtc 39567296  T
Q  401 ttgtacggcgttgtttgatttcgc 424  Q
    |||| |||||||||||||||||||    
T  39567297 ttgtgcggcgttgtttgatttcgc 39567320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 523
Target Start/End: Original strand, 13007126 - 13007350
Alignment:
Q  295 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 394  Q
    ||||| ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| |||||||||||||    
T  13007126 cattttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttc 13007224  T
Q  395 atcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatga 494  Q
     ||||||||| ||||   ||||||||| | ||||||| | ||||||| ||| |||  | ||||||||||  | ||| ||||| ||| ||||||   ||||    
T  13007225 gtcgtcttgtgcggc---gtttgattttgtgttttgtcgcggtgtttgtttagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatga 13007321  T
Q  495 tttggacgccaatgttgtagatccggaag 523  Q
    |||||||| ||| |||| |||||||||||    
T  13007322 tttggacgtcaacgttgcagatccggaag 13007350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 355 - 523
Target Start/End: Original strand, 14211176 - 14211348
Alignment:
Q  355 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggtta 450  Q
    |||| ||||||||||||||  ||||||| ||||||||||| ||||||||| ||||||||||||||||||| |  ||||||||  ||||||  |||||||     
T  14211176 tttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttc 14211275  T
Q  451 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
     |||||||||||||||||||  |||||||| || ||||  |||||||||||| ||| |||| |||||| ||||    
T  14211276 gtattgaaagatcagcttcagacaatcacaaatgcaatcaatgatttggacgtcaacgttgcagatccagaag 14211348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 354 - 523
Target Start/End: Complemental strand, 35921132 - 35920963
Alignment:
Q  354 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaata 453  Q
    ||||| ||||||||||||||| ||||||| || | |||||| ||||||| |  | |||||||||||||||||| |||||| |||||| ||||| ||  ||    
T  35921132 ttttcgtgatttcgtcgtctgagtgcgacattatattgttcgtcgtcttatgagacgttgtttgatttcgcgtcttgttgcggtgttcatttgtttccta 35921033  T
Q  454 ttgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    || ||||||||  |||||||||||||| |||||||  |||||||| ||| ||| |||| |||||||||||    
T  35921032 ttaaaagatcaaattcaatcaatcacagattcaatcaatgatttgaacgtcaacgttgcagatccggaag 35920963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 6012323 - 6012105
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| ||  | |||||||| ||| ||||||||| ||||  ||||||| ||||||  |||||  |||||||||||| |||||    
T  6012323 ctttcaatctaaataagtgtttttcacgtctatcaagtttttccttttgtgttttttg-tgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtc 6012225  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| |||||||   |||||||||||||||| | ||||||| ||  |||  |||| |||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  6012224 ttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatctacatcagtcaattacaaattcaaccaatgatttgga 6012128  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||||||||||||||||||||    
T  6012127 cgtcaatgttgtagatccggaag 6012105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 14726647 - 14726428
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||| |||||| ||| |||||||||||||| ||||||| ||||| ||||  ||||||||||||||  |||||  |||||||||||| |||||    
T  14726647 ctttcaatctaactaagtggttttcatatatatcaagttttttcttatgtgtttttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtc 14726548  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||   ||| ||||||||||||||| ||||   ||||||  |||  ||  |||||||||||| || ||| ||||||||| ||||||   |||||||||     
T  14726547 ttgt---gcgatgtttgatttcgcgtcttgtcacggtgttagtttatttcttattgaaagatcggcatcagtcaatcacaaattcaaccaatgatttggg 14726451  T
Q  501 cgccaatgttgtagatccggaag 523  Q
     | ||| |||| |||||||||||    
T  14726450 tgtcaacgttgaagatccggaag 14726428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 523
Target Start/End: Complemental strand, 9113916 - 9113692
Alignment:
Q  295 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 394  Q
    ||||| |||| |||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| |||| ||||||||    
T  9113916 cattttcttttaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttctgttgttc 9113818  T
Q  395 atcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatga 494  Q
     ||||||||| ||||   |||||||||| |||||||| | ||||||| ||  |||  | ||||||||||  | ||| ||||| ||| ||||||   ||||    
T  9113817 gtcgtcttgtgcggc---gtttgatttcacgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatga 9113721  T
Q  495 tttggacgccaatgttgtagatccggaag 523  Q
    |||||||| ||| |||| |||||||||||    
T  9113720 tttggacgtcaacgttgcagatccggaag 9113692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 11977122 - 11976902
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtg-tattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||||||||||||||||| ||| || ||||||||||| |||||||||||| | ||||  ||||||||||||||  ||| | |||||| |||||| ||||    
T  11977122 ctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttttttgtgatttcgtcgtctaagtgtggcgttgtattgttcgtcgt 11977023  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    |||||||| |   |||||||||||||| |||| | ||||||| |||  ||  |||||| ||||| || ||| ||||| ||| ||||||   |||||||||    
T  11977022 cttgtacgac---gtttgatttcgcgtcttgtcgcggtgtttgtttattttctattgagagatcggcatcagtcaattacaaattcaaccaatgatttgg 11976926  T
Q  500 acgccaatgttgtagatccggaag 523  Q
    |||  || |||| ||||| |||||    
T  11976925 acgtgaacgttgaagatctggaag 11976902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 287 - 523
Target Start/End: Original strand, 38007245 - 38007479
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgt-gtattttcatgatttcgtcgtctgtgtgcgacgtt 385  Q
    ||||||| | ||| |||||||| |||||||||| ||| || | ||||||||| |||| |||| | || ||||  ||||||||||||||  || |||| ||    
T  38007245 tctttttcccttttctttcaatttaaataagtggttttcacacatatcaagttttttgtttttttgtttttttgtgatttcgtcgtctaagtacgacatt 38007344  T
Q  386 gtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattc 485  Q
    ||| ||||||||||||||| |||||||   |||||||| ||||||| | ||||||| |||  ||  |||||||||||| || ||| ||||| ||| |||     
T  38007345 gtgctgttcatcgtcttgtgcggcgtt---tgatttcgtgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaattt 38007441  T
Q  486 aattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||   |||||||||||| ||| |||| |||||||||||    
T  38007442 aaccaatgatttggacgtcaacgttgaagatccggaag 38007479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 357
Target Start/End: Complemental strand, 8985132 - 8985062
Alignment:
Q  288 cttttttcatttcctttcaatctaaa-taagtgatttccatatatatcaagtgttttcttttgtgtatttt 357  Q
    |||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  8985132 ctttttccattttctttcaatctaaaataagtgatttccacatatatcaagtgttttcttttgtgtttttt 8985062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 301 - 394
Target Start/End: Complemental strand, 8096683 - 8096590
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 394  Q
    ||||||||||||||||||| ||| || ||||||||||| ||||||||||||| |||   ||||||| ||||||  ||||| |||||||||||||    
T  8096683 ctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgtttttgtgtgatttcatcgtctaagtgcggcgttgtgttgttc 8096590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 409
Target Start/End: Original strand, 6216802 - 6216909
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| ||||||||| ||||  ||||||||||||||   |||| |||| |||||||| |||||    
T  6216802 ctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgt-tttttgtgatttcgtcgtctaaatgcggcgttatgttgttcgtcgtc 6216900  T
Q  401 ttgtacggc 409  Q
    |||| ||||    
T  6216901 ttgtgcggc 6216909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 428 - 488
Target Start/End: Original strand, 31315934 - 31315994
Alignment:
Q  428 ttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 488  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||| |||||||||||    
T  31315934 ttgttgtggtgtttgtttgattcatattgaaagatcagcttcaatcaataacatattcaat 31315994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 523
Target Start/End: Complemental strand, 31391938 - 31391720
Alignment:
Q  304 tcaatctaaataagtgatttccatatatatcaagtgttttcttttg--tgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||||||||||||||| ||| || || |||||||| ||| ||| ||  | | ||||  ||||||||||||||  ||||||||||||||||||| ||||||    
T  31391938 tcaatctaaataagtggttttcacatttatcaagtttttccttatgtatttttttttgtgatttcgtcgtctaagtgcgacgttgtgttgttcttcgtct 31391839  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
    ||| ||||    ||||||||||| | |||| |  |||||| ||| |||  |||||||||||| || ||| ||||| ||| ||||||   ||||||||| |    
T  31391838 tgtgcggc---atttgatttcgcatcttgtcgcagtgtttgtttagtttttattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggc 31391742  T
Q  502 gccaatgttgtagatccggaag 523  Q
    | ||| |||| |||||| ||||    
T  31391741 gtcaacgttgcagatccagaag 31391720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 301 - 441
Target Start/End: Original strand, 26825334 - 26825469
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| ||  | |||||||| ||| ||||||||| |||   |||||||||| |||  ||||| ||||||||||||| || ||    
T  26825334 ctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgtttttg--tgatttcgtcttctaagtgcggcgttgtgttgttcgtcttc 26825431  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 441  Q
    |||| ||||   ||||||||||||||||||| | |||||||    
T  26825432 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgttt 26825469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 487
Target Start/End: Original strand, 35850760 - 35850884
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||  || |||||||||||||||| ||||||||| ||||   ||||||||||||||||| | | ||||||| |||  ||  ||||||||    
T  35850760 tgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttatcgcggtgtttgtttatttcctattgaaa 35850856  T
Q  460 gatcagcttcaatcaatcacatattcaa 487  Q
    |||| || ||| ||||| ||| ||||||    
T  35850857 gatcggcatcagtcaattacaaattcaa 35850884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 489
Target Start/End: Original strand, 31364469 - 31364558
Alignment:
Q  396 tcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaatt 489  Q
    |||||||||  |||||||||| ||||||    |||||| ||||||| ||||||| |||||||| |||||||| || ||||||||||||||||||    
T  31364469 tcgtcttgtgaggcgttgttttatttcg----ttgttgcggtgtttgtttggttcatattgaatgatcagctccagtcaatcacatattcaatt 31364558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 462
Target Start/End: Complemental strand, 36344562 - 36344487
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||||||| ||||||||| ||||||||||||||||  |||||| ||| |||||| ||||| || ||||||||||||    
T  36344562 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttgattcatattgaaagat 36344487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 485
Target Start/End: Original strand, 19120887 - 19120995
Alignment:
Q  376 gtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaa 475  Q
    ||||| ||||||||||||| ||||||| |  ||| |||||||||||||||| |||||| ||||||| |||| ||  | ||| ||||||||||||| ||||    
T  19120887 gtgcggcgttgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgttgcggtgtttgtttgtttccttttg-aagatcagcttcagtcaa 19120985  T
Q  476 tcacatattc 485  Q
    | ||| ||||    
T  19120986 ttacaaattc 19120995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 464
Target Start/End: Original strand, 34881726 - 34881803
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || ||||||||||||||    
T  34881726 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatca 34881803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 519
Target Start/End: Complemental strand, 11074085 - 11073871
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||| ||||||||||||||  || || || |||||||| ||| ||||||| | ||||  ||||||||| ||||  ||||  |||||| |||||| |||||    
T  11074085 cttttaatctaaataagtggctttcacatctatcaagtttttccttttgtattttttg-tgatttcgttgtctaagtgcagcgttgttttgttcgtcgtc 11073987  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| |||||||   ||||||||||| |||| | ||||||| ||  |||  |||||||| |||  | ||||||||| ||| ||||||   ||||||||||    
T  11073986 ttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaatatctacatcaatcaattacaaattcaagcaatgatttgga 11073890  T
Q  501 cgccaatgttgtagatccg 519  Q
    || ||| |||  |||||||    
T  11073889 cgtcaacgttacagatccg 11073871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 41184511 - 41184435
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  |||||||||  |||| || |||||||||||||    
T  41184511 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcgtttgattcatattgaaagatc 41184435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 356 - 463
Target Start/End: Complemental strand, 7613160 - 7613053
Alignment:
Q  356 ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatatt 455  Q
    |||||||||| ||| |||| ||| |  | |||||||||| ||||||||| |   ||||||||||||| ||| |||||| |||||| ||||| || |||||    
T  7613160 ttcatgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatatt 7613061  T
Q  456 gaaagatc 463  Q
    ||||||||    
T  7613060 gaaagatc 7613053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 460 - 523
Target Start/End: Complemental strand, 8984985 - 8984922
Alignment:
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||||||||| | |||||||||||| |||| ||||||||||||| ||| |||| |||||||||||    
T  8984985 gatcagctttagtcaatcacatatacaatcgatgatttggacgacaacgttgcagatccggaag 8984922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 516
Target Start/End: Original strand, 13421917 - 13422047
Alignment:
Q  383 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacata 482  Q
    |||||||||||| ||||||||| |||   | ||||||||||||| |||| || ||||| |||| |||  ||||||||||||  | ||| ||||| ||| |    
T  13421917 gttgtgttgttcgtcgtcttgtgcgg---tatttgatttcgcgtattgtcgttgtgttcatttagttcctattgaaagatcgacatcagtcaattacaaa 13422013  T
Q  483 ttcaattgatgatttggacgccaatgttgtagat 516  Q
    ||||||  ||||||||| || |||||||| ||||    
T  13422014 ttcaatcaatgatttgggcgtcaatgttgcagat 13422047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 498
Target Start/End: Original strand, 16758521 - 16758636
Alignment:
Q  383 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacata 482  Q
    ||||||||||| |||||| ||| |||  || |||||||||||||||||||  ||||||  ||||||| ||||||||| ||| |  ||| ||||||| | |    
T  16758521 gttgtgttgtttatcgtcgtgtgcggtcttatttgatttcgcgttttgttacggtgttcgtttggttcatattgaaaaatctgtgtcagtcaatcataga 16758620  T
Q  483 ttcaattgatgatttg 498  Q
    ||||||  ||||||||    
T  16758621 ttcaatcaatgatttg 16758636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 434
Target Start/End: Complemental strand, 1582221 - 1582147
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgt 434  Q
    ||||||| |||| || |||||||||||||| |||  ||||||||| ||||||||||||||||  ||| |||||||    
T  1582221 tgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 1582147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 434
Target Start/End: Original strand, 1602594 - 1602668
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgt 434  Q
    ||||||| |||| || |||||||||||||| |||  ||||||||| ||||||||||||||||  ||| |||||||    
T  1602594 tgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 1602668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 463
Target Start/End: Original strand, 42886484 - 42886562
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||| ||||||||| ||||||||||||||||| ||  ||||||  ||||| ||||| || ||||| |||||||    
T  42886484 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcccgccttgttgcagtgttcatttgattcatattaaaagatc 42886562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 289 - 412
Target Start/End: Complemental strand, 14082567 - 14082448
Alignment:
Q  289 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtg 388  Q
    ||||||| |||  ||||||||||||||||||  || || ||||||||||| ||||||| | |   ||||  ||||||| ||||||  ||| | |||||||    
T  14082567 ttttttccttttatttcaatctaaataagtggctttcacatatatcaagt-ttttcttatat---tttttgtgatttcatcgtctaagtgtggcgttgtg 14082472  T
Q  389 ttgttcatcgtcttgtacggcgtt 412  Q
    |||||| |||||||||||||||||    
T  14082471 ttgttcgtcgtcttgtacggcgtt 14082448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 15571389 - 15571477
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgtt 390  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| |||||||  |||||  ||||||||||||||  ||| | |||||||||    
T  15571389 ctttcaatctaaataagtggttttcacatatatcaagtttttccttttgt-aatttttgtgatttcgtcgtctaagtgtggcgttgtgtt 15571477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 414 - 523
Target Start/End: Original strand, 34945405 - 34945514
Alignment:
Q  414 tttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgta 513  Q
    |||||||||||||||||| | ||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   |||||||||||| ||| |||| |    
T  34945405 tttgatttcgcgttttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgca 34945504  T
Q  514 gatccggaag 523  Q
    ||||||||||    
T  34945505 gatccggaag 34945514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 2057909 - 2057833
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||  ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  2057909 tgttgttcgtcgtcttgcgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 2057833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 478
Target Start/End: Complemental strand, 41214714 - 41214646
Alignment:
Q  410 gttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatca 478  Q
    ||||||||||||||||| || ||   |||||| |||| || |||||||||||||||||| |||||||||    
T  41214714 gttgtttgatttcgcgtcttatttccgtgtttctttgatttatattgaaagatcagctttaatcaatca 41214646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 523
Target Start/End: Original strand, 25980062 - 25980279
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||||| ||||||||||| |||  | || |||| ||| ||| ||||||||  ||||  || |||||||||||  |||||   ||||||||||| ||||||    
T  25980062 tttcaacctaaataagtggttttaacatctatcgagtttttccttttgtggtttttg-tggtttcgtcgtctaagtgcggtattgtgttgttcgtcgtct 25980160  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
    ||| |||||||   | ||||||||| |||| | ||||||| ||| |||  ||||||||||||| | ||| ||||  ||| ||||||   ||||||||| |    
T  25980161 tgtgcggcgtt---taatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatcaacatcagtcaactacaaattcaaccaatgatttgggc 25980257  T
Q  502 gccaatgttgtagatccggaag 523  Q
    | ||| |||| |||| ||||||    
T  25980258 gtcaaagttgcagattcggaag 25980279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 458
Target Start/End: Original strand, 30298216 - 30298287
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 458  Q
    |||||||| ||||||||| ||||| ||||||||||  ||| || ||| |||||||||||| || ||||||||    
T  30298216 tgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgtttatttgattcatattgaa 30298287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 7036131 - 7036181
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtg 351  Q
    ||||||||||||||||||| ||| || ||||||||| | ||||||||||||    
T  7036131 ctttcaatctaaataagtggttttcacatatatcaatttttttcttttgtg 7036181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 373
Target Start/End: Complemental strand, 26878264 - 26878195
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtct 373  Q
    ||||||||||||||||||| ||| || ||| ||||||| |||||||||||   ||||  ||||||||||||||    
T  26878264 ctttcaatctaaataagtggttttcacataaatcaagttttttcttttgt---tttttgtgatttcgtcgtct 26878195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 464
Target Start/End: Complemental strand, 37986224 - 37986139
Alignment:
Q  376 gtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    ||||| ||||||||||||||||||||||| ||||   |||||||||||| | |||||| || |||  |||| ||  |||||||||||||    
T  37986224 gtgcggcgttgtgttgttcatcgtcttgtgcggc---gtttgatttcgcatcttgttgcggcgttcgtttgattcttattgaaagatca 37986139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 8985221 - 8985180
Alignment:
Q  202 ttctctctaagttttctttctctttcagtcgttgaggagggg 243  Q
    |||||||||||||||| |||||||||| ||||| ||||||||    
T  8985221 ttctctctaagttttcgttctctttcactcgtttaggagggg 8985180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 373
Target Start/End: Original strand, 34945325 - 34945395
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtct 373  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||  ||||  ||||||||||||||    
T  34945325 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg--tttttgtgatttcgtcgtct 34945395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 38111055 - 38110974
Alignment:
Q  383 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||||||  | ||||||| |||||||||||||||| | || ||||||  |||||| |||||||  |||||||| ||||    
T  38111055 gttgtgttgtttgttgtcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttggttcctattgaaatatca 38110974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 502
Target Start/End: Original strand, 39567321 - 39567370
Alignment:
Q  453 attgaaagatcagcttcaatcaatcacatattcaattgatgatttggacg 502  Q
    ||||||||||||||||||  |||||||| |||||||  ||||||||||||    
T  39567321 attgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacg 39567370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 354 - 418
Target Start/End: Complemental strand, 9591098 - 9591034
Alignment:
Q  354 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttga 418  Q
    |||||||| |||| ||||||| ||  |  |||||||||||||| ||||||| |||||||||||||    
T  9591098 ttttcatggtttcctcgtctgagtatggtgttgtgttgttcattgtcttgtgcggcgttgtttga 9591034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 19259882 - 19259807
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||| ||||||||| ||| ||| ||  || |||||||||||| || |||||||||||||    
T  19259882 tgttgttcgtcgtcttgtgcggtgttgtttga-ttcccgtcttcgtgcggtgtttatttgattcatattgaaagatc 19259807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 26578260 - 26578336
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| || |||||||||||||| ||| ||  ||  ||||| ||||| || |||||||||||||    
T  26578260 tgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaagatc 26578336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 27266930 - 27266854
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||  ||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  27266930 tgttgttcgtcgtcttgtgcggcactgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 27266854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 27576421 - 27576345
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||  ||||| || |||||||||||||| ||| |||||| |||||| ||||  || |||||||||||||    
T  27576421 tgttgttcttctacttgtgcgacgttgtttgatttcccgtcttgttgcggtgttcatttattttatattgaaagatc 27576345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 371
Target Start/End: Original strand, 41749211 - 41749295
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgt 371  Q
    |||||||||  || |||| |||||||||||||  ||| || ||||||||||| |||| ||||| |  ||||||||||||| ||||    
T  41749211 tcttttttccatttcttttaatctaaataagttgttttcacatatatcaagttttttattttgcgctttttcatgatttcatcgt 41749295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 459
Target Start/End: Complemental strand, 43261890 - 43261818
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    |||||||| ||||||| | ||| ||||||||||||  ||| || ||| |||||||||||| || |||||||||    
T  43261890 tgttgttcgtcgtcttatgcggtgttgtttgattttccgtcttcttgcggtgtttatttgattcatattgaaa 43261818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 6e-57; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 287 - 523
Target Start/End: Original strand, 30493420 - 30493655
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttg 386  Q
    |||||||||  || ||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||||||| |||||  ||||    
T  30493420 tcttttttccctttctttcaaactaaataagtgatttccacatatatcaagtgttttcttttgtgt-ttttcgtgatttcctcgtctgagtgcggtgttg 30493518  T
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 486  Q
    |||||||| ||||||||| | ||||||||||||||||  | ||||| |||||||  ||||||| |||||||||||||| ||||| |||||| ||||||||    
T  30493519 tgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatattgaaagatcaacttcagtcaatctcatattca 30493618  T
Q  487 attgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||  |||||||||||| ||| |||| | |||||||||    
T  30493619 atcaatgatttggacgtcaacgttgcaaatccggaag 30493655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 301 - 518
Target Start/End: Original strand, 8102624 - 8102844
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||||||| || | | ||||||| ||||||||||||| ||||| ||||||||||||||  |||| |||||||||| ||| |||||    
T  8102624 ctttcaatctaaataagtgattttcacaaacatcaagt-ttttcttttgtgttttttcgtgatttcgtcgtcttagtgcaacgttgtgtttttcgtcgtc 8102722  T
Q  401 ttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 496  Q
    |||| |||||||||||||||||||   |||||||||  ||||||| |||||||  |||||||||||||||||||  |||||||| ||||| |  ||||||    
T  8102723 ttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgtttgtttggttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatt 8102822  T
Q  497 tggacgccaatgttgtagatcc 518  Q
    ||| || ||| |||| ||||||    
T  8102823 tgggcgtcaacgttgcagatcc 8102844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 302 - 511
Target Start/End: Complemental strand, 32191916 - 32191709
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||| | ||||| |||||| |||||||  ||||| ||||||||||||| | | ||    
T  32191916 tttcgatctaaataagtgatttctacatatatcaagtgttttcttttgtattttttcgtgattttgtcgtctaagtgcggcgttgtgttgttcgttgact 32191817  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
    |||  ||||||||||| |||||  | |||||  |||||| |||||||| || |||||| |  ||||||| |||||||||||||||||  |||||||||||    
T  32191816 tgtgtggcgttgtttggtttcgtatattgtttcggtgttcatttggttcatcttgaaaaa--agcttcagtcaatcacatattcaatcaatgatttggac 32191719  T
Q  502 gccaatgttg 511  Q
    ||||| ||||    
T  32191718 gccaacgttg 32191709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 302 - 522
Target Start/End: Complemental strand, 1933882 - 1933660
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcga-cgttgtgttgttcatcgt 399  Q
    |||| |||||||||||| |||| || ||||||||||| ||||||||||||| |||| | ||||||||||||||| | | |  |||||||||| |  ||||    
T  1933882 tttcgatctaaataagttattttcacatatatcaagttttttcttttgtgtttttttcgtgatttcgtcgtctgagagtgggcgttgtgttgctagtcgt 1933783  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    ||||| |||| ||||||||||| | || | |||| ||||||| ||||||| ||||  |||||||| ||||||||||||||| |||||||  |||||||||    
T  1933782 cttgtgcggcattgtttgattttgtgtctggttgcggtgtttgtttggttcatatcaaaagatcaacttcaatcaatcacagattcaatcaatgatttgg 1933683  T
Q  500 acgccaatgttgtagatccggaa 522  Q
    ||| ||| |||| ||||||||||    
T  1933682 acgtcaacgttgcagatccggaa 1933660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 264 - 500
Target Start/End: Complemental strand, 26588689 - 26588462
Alignment:
Q  264 gatctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgat 363  Q
    |||||| |||||||||||   ||| ||||| |||||| ||| |||||||||||||| |||||| ||||||||||| |||| ||||||||        ||     
T  26588689 gatctataatcacccatcttcattttttttccatttctttt-aatctaaataagtggtttccacatatatcaagtttttttttttgtgt--------gaa 26588599  T
Q  364 ttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    ||| |||| || |||||  ||||||||| |  ||||||||| ||||||||||||||||| ||| |||||| ||||||  ||||||| |||||||||||||    
T  26588598 ttcatcgtttgagtgcggagttgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatc 26588499  T
Q  464 agcttcaatcaatcacatattcaattgatgatttgga 500  Q
    | ||||| ||||||||| |||||||| ||||||||||    
T  26588498 aacttcagtcaatcacacattcaattaatgatttgga 26588462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 301 - 421
Target Start/End: Original strand, 30776570 - 30776689
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||| ||||||| ||| ||||||| ||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||| || ||    
T  30776570 ctttcaatctaaataagtaatttccacatacatcaagt-ttttcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcatc 30776668  T
Q  401 ttgtacggcgttgtttgattt 421  Q
    |||| ||||||||||||||||    
T  30776669 ttgtgcggcgttgtttgattt 30776689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 312 - 523
Target Start/End: Complemental strand, 7976355 - 7976154
Alignment:
Q  312 aataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcg 410  Q
    ||||||||||||||| |||||| |||||||||||||||||| |||| | ||||||||||||||| |||||  |||||||||||| ||||||||| |||||    
T  7976355 aataagtgatttccacatatat-aagtgttttcttttgtgtttttttcgtgatttcgtcgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcg 7976257  T
Q  411 ttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgtt 510  Q
    || ||| |||  |||| |||||||||||||  ||| ||| ||||| ||||          |||||||||| |||||||| || ||||||||| ||| |||    
T  7976256 ttttttaattatgcgtcttgttgtggtgttcgtttagttcatattaaaag----------atcaatcacagattcaattaattatttggacgtcaacgtt 7976167  T
Q  511 gtagatccggaag 523  Q
    |||||||||||||    
T  7976166 gtagatccggaag 7976154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 287 - 488
Target Start/End: Original strand, 28981067 - 28981265
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttg 386  Q
    |||||||||  || |||||||||||||||||||||||||| |||||||||||||||| ||||   | ||||  ||||||  ||||||| || || |||||    
T  28981067 tcttttttccctttctttcaatctaaataagtgatttccacatatatcaagtgttttttttt---tttttttgtgattttatcgtctgagtacggcgttg 28981163  T
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 486  Q
    |||||||| ||||||| | ||| |||||||||||| |  | |||||||||||||  ||||||| ||||| |||||| || || | ||||||||| |||||    
T  28981164 tgttgttcgtcgtcttctgcggtgttgtttgattttgtatcttgttgtggtgttcgtttggttcatattcaaagattagttttagtcaatcacagattca 28981263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 376 - 523
Target Start/End: Original strand, 31296796 - 31296943
Alignment:
Q  376 gtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaa 475  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || | ||||||  ||||| ||||| || ||||||||| ||||| |||| ||||    
T  31296796 gtgcggcgttgtgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagtttcagtcaa 31296895  T
Q  476 tcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||  |||||||||||||||||| |||| ||| |||| |||||||||||    
T  31296896 tccaatattcaattgatgatttagacgtcaacgttgcagatccggaag 31296943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 545928 - 546154
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||  |||| || ||| ||||||| |||||||| |||| ||||| ||||||| ||||||  ||||||||||| ||||||| |||||    
T  545928 ctttcaatctaaataagcaattttcacatacatcaagt-ttttctttcgtgttttttcgtgatttcatcgtcttagtgcgacgttgcgttgttcgtcgtc 546026  T
Q  401 ttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcac-atattcaattgatgat 495  Q
    |||| || |||||||||||||| |   |||||||||  ||||||  |||||||  |||||||||||||||||||  ||||||| | |||||||  |||||    
T  546027 ttgtgcgacgttgtttgatttcacattttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaaattcaatcaatgat 546126  T
Q  496 ttggacgccaatgttgtagatccggaag 523  Q
    |||| || ||| |||| |||||| ||||    
T  546127 ttgggcgtcaacgttgcagatccagaag 546154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 33053353 - 33053135
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  33053353 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 33053255  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   ||||||||||||||||||| | ||||||| ||  |||  | ||||||||||  | ||| ||||| ||| ||||||   |||||||| |    
T  33053254 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttgaa 33053158  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  33053157 cgtcaacgttgcagatccggaag 33053135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 523
Target Start/End: Original strand, 23128517 - 23128741
Alignment:
Q  295 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 394  Q
    ||||| |||||| |||||||||||| ||| || || |||||||| ||| ||||||| | ||||  ||||||| ||||||  ||||| |||||||||||||    
T  23128517 cattttctttcattctaaataagtggttttcacatctatcaagtttttccttttgtattttttg-tgatttcatcgtctaagtgcggcgttgtgttgttc 23128615  T
Q  395 atcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatga 494  Q
     |||||||||  ||||||   |||||||||||||||| |  |||||| ||  |||  ||||||||||||| | ||| ||||| ||| |||||||  ||||    
T  23128616 gtcgtcttgtgtggcgtt---tgatttcgcgttttgtcgcagtgtttgttcagttcttattgaaagatcaacatcagtcaattacaaattcaatcaatga 23128712  T
Q  495 tttggacgccaatgttgtagatccggaag 523  Q
    |||||| | ||| ||||||||||||||||    
T  23128713 tttggatgtcaacgttgtagatccggaag 23128741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 267 - 523
Target Start/End: Complemental strand, 3913794 - 3913541
Alignment:
Q  267 ctagaatcacccatccgtattcttttttc--atttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatt 364  Q
    |||||||||||| |||| || ||||||||  |||  ||||||||||||||||||| ||| || || |||||||| ||||||||||||| ||||  | |||    
T  3913794 ctagaatcacccctccgcat-cttttttcccattctctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgt-tttttgttatt 3913697  T
Q  365 tcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||||  ||||| ||||||||||||| |||||||||   ||   |||||||||||||| |||| | ||||||| ||  |||  ||||||||||||     
T  3913696 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgt---gcaacgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatct 3913600  T
Q  465 gcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
     | ||||||||| ||| ||||||   ||||||| |||| ||| |||| |||||| ||||    
T  3913599 acatcaatcaattacaaattcaagcaatgatttagacgtcaacgttgcagatccagaag 3913541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 422
Target Start/End: Original strand, 1523310 - 1523426
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||    || ||||| ||||||||||||||  ||||||||||||||||||| |||||    
T  1523310 ctttcaatctaaataagtgatttccacatacatcaagt-ttttctt----gttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc 1523404  T
Q  401 ttgtacggcgttgtttgatttc 422  Q
    |||| || | ||||||||||||    
T  1523405 ttgtgcgacattgtttgatttc 1523426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 523
Target Start/End: Original strand, 14801735 - 14801950
Alignment:
Q  311 aaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcg 410  Q
    ||||||| ||||| || ||| ||||||| |||||||| |||  ||||| ||||||||||||||  ||||||| ||||||||||| ||||||||| |||||    
T  14801735 aaataagggattttcacatacatcaagt-ttttctttcgtgctttttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcg 14801833  T
Q  411 ttgtttgatttcg--cgttttgttgtg--gtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 506  Q
     |||||||||| |    |||| |||||  |||||  |||||||  ||||||||||| |||||||  |||||||| |||||||  ||||||||| || |||    
T  14801834 ctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaa 14801933  T
Q  507 tgttgtagatccggaag 523  Q
     |||| |||||| ||||    
T  14801934 cgttgcagatccagaag 14801950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 22571457 - 22571562
Alignment:
Q  383 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattg-aaagatcagcttcaatcaatcacat 481  Q
    |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||||  |||||||||||||| ||| |||||||||| || || |||     
T  22571457 gttgtgttgttcgtcgtcttgtgcggcgttgtttgattttgcgttttgttatggtgttcgtttggttaatattgaaaaaatcagcttcagtcgattacaa 22571556  T
Q  482 attcaa 487  Q
    ||||||    
T  22571557 attcaa 22571562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 32327402 - 32327184
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||| | ||||  ||||| ||||||||||||| |||||    
T  32327402 ctttcaatataaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcatagtctaagtgcggcgttgtgttgttcgtcgtc 32327304  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   |||||||||||||| |||| | ||||||||||   ||  ||||||||||||  | ||||||||| ||| ||||||   ||||||| ||    
T  32327303 ttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtttattcaatttctattgaaagatctacatcaatcaattacaaattcaagcaatgattttga 32327207  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    ||  || |||| |||||||||||    
T  32327206 cgttaacgttgcagatccggaag 32327184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 296 - 488
Target Start/End: Complemental strand, 11321659 - 11321471
Alignment:
Q  296 atttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttca 395  Q
    |||| ||||||||||||||||||| ||| || |||||| |||| |||||||||||||| ||| |||||||||||||||  |||||  ||||||||||||     
T  11321659 attttctttcaatctaaataagtggttttcacatatattaagttttttcttttgtgtaattt-atgatttcgtcgtcttagtgcggtgttgtgttgttcg 11321561  T
Q  396 tcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 488  Q
    | ||| || | | |   |||||||||| ||| |||||||||||||  ||| |||  ||||||||||||  | ||| ||||| ||| |||||||    
T  11321560 tggtcctgcatgac---gtttgatttcacgtcttgttgtggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaaattcaat 11321471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 360 - 523
Target Start/End: Complemental strand, 31852315 - 31852160
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||| ||||||||||||||||||| |||||||| ||  |||||||| ||| ||||| ||||| |||        ||||| |||||||||    
T  31852315 tgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcttgaacaacgttgttttattccgcgtcttgttctgg--------tggtttatattgaaa 31852224  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||||| ||||| |||| |||| ||| |||  |||||||| ||| ||| |||| |||||||||||    
T  31852223 gatcaacttcagtcaaccacagattaaatcaatgatttgaacgtcaaagttgcagatccggaag 31852160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 34018459 - 34018567
Alignment:
Q  295 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 394  Q
    ||||| |||||||| |||||||||| ||| || ||||||||||| ||||||||||||| ||||  ||||||||||||||  ||| | |||||||||||||    
T  34018459 cattttctttcaatttaaataagtggttttcacatatatcaagttttttcttttgtgt-tttttgtgatttcgtcgtctaagtgtggcgttgtgttgttc 34018557  T
Q  395 atcgtcttgt 404  Q
     |||||||||    
T  34018558 gtcgtcttgt 34018567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 522
Target Start/End: Original strand, 606109 - 606326
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||| | ||| |||||||||  |||  ||||||||||||||  ||||| ||||||||||||| || ||    
T  606109 ctttcaatctaaataagtggttttcacatctatcaaatttttccttttgtgttatttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatc 606207  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   |||||||||||| |||||| | ||||||| ||  |||  ||||||||||||  | ||| ||||| | | ||||||   ||||||||||    
T  606208 ttgtgcggc---gtttgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaattataaattcaaccaatgatttgga 606304  T
Q  501 cgccaatgttgtagatccggaa 522  Q
    |  ||| |||| ||||||||||    
T  606305 catcaacgttgcagatccggaa 606326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 288 - 498
Target Start/End: Original strand, 678996 - 679207
Alignment:
Q  288 cttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatt-ttcatgatttcgtcgtctgtgtgcgacgttg 386  Q
    |||||| || || ||||||||||||||||  ||||| || ||||||||||| ||||||| | | | || ||| ||||||||||||  | ||||  | | |    
T  678996 ctttttccactttctttcaatctaaataaccgattttcacatatatcaagttttttcttgttttttttcttcgtgatttcgtcgttcgagtgcagcatag 679095  T
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 486  Q
    |||||||| || |||| | |||||| ||||  ||| |||| |||||||||| ||  |||||||  ||||||||| |||| |||| |||||||||||||||    
T  679096 tgttgttcgtcatcttatgcggcgtagtttagttttgcgtcttgttgtggtattcgtttggtttttattgaaaggtcagtttcagtcaatcacatattca 679195  T
Q  487 attgatgatttg 498  Q
    ||  ||||||||    
T  679196 atcaatgatttg 679207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 441
Target Start/End: Complemental strand, 68186 - 68050
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||| |||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||| |  |||||||| |||| ||||    
T  68186 cttttaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgtggtgttgtgttattcaccgtc 68088  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 441  Q
    |||| |||||||   |||||||||||||||| |||||||||    
T  68087 ttgtgcggcgtt---tgatttcgcgttttgtcgtggtgttt 68050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 347 - 484
Target Start/End: Complemental strand, 528493 - 528356
Alignment:
Q  347 ttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttg 446  Q
    |||||| ||||| |||||||||||||   ||||||||||||||| ||  || |||||| |||||||||||||||| | || ||||||  |||||| |||     
T  528493 ttgtgttttttcgtgatttcgtcgtccaagtgcgacgttgtgttatttgtcatcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttc 528394  T
Q  447 gttaatattgaaagatcagcttcaatcaatcacatatt 484  Q
    |||  ||| ||||||||||||||| | ||| |||||||    
T  528393 gttcttatcgaaagatcagcttcagtaaattacatatt 528356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 309 - 523
Target Start/End: Original strand, 127583 - 127792
Alignment:
Q  309 ctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacgg 408  Q
    ||||||||||| ||| || ||||||||||| ||| ||||||||| ||||  ||||||||||||||  ||||  ||||||||||||| |||||||||   |    
T  127583 ctaaataagtggttttcacatatatcaagtttttccttttgtgt-tttttgtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgt---g 127678  T
Q  409 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatg 508  Q
     |   |||||||||||| ||||| | |||||| |||| |||  ||||||||||||  | ||| ||||| ||| |||| ||  ||||||||| || ||| |    
T  127679 tgacatttgatttcgcg-tttgtcgcggtgttcatttagttcctattgaaagatcgacatcagtcaattacaaattcgatcaatgatttgggcgtcaacg 127777  T
Q  509 ttgtagatccggaag 523  Q
    ||| |||| ||||||    
T  127778 ttgcagattcggaag 127792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 346 - 498
Target Start/End: Original strand, 19164657 - 19164809
Alignment:
Q  346 tttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttattt 445  Q
    ||||||| ||||| |||||| |||||||||||||| ||||||||||||  ||||||||| ||   ||||||||||| | ||  |||||||||| |  |||    
T  19164657 tttgtgttttttcctgattttgtcgtctgtgtgcggcgttgtgttgtttgtcgtcttgtgcgaaattgtttgattttgtgtcatgttgtggtgatcgttt 19164756  T
Q  446 ggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 498  Q
    | |  ||||||||||| | ||||||  || | |||||||||||  ||||||||    
T  19164757 gctctatattgaaagaccggcttcagccacttacatattcaatcaatgatttg 19164809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 25064242 - 25064318
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||  || |||||| ||||| || |||||||||||||    
T  25064242 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgttttcgtgcggtgttcatttgattcatattgaaagatc 25064318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 441
Target Start/End: Complemental strand, 7515382 - 7515251
Alignment:
Q  305 caatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 404  Q
    ||||||||||||||| ||| || || |||||||| | ||||||||||| |||   ||||||||||||||  ||||| |||| |||||||| ||||||||     
T  7515382 caatctaaataagtggttttcacatctatcaagtttcttcttttgtgtttttg--tgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttg- 7515286  T
Q  405 acggcgttgtttgatttcgcgttttgttgtggtgttt 441  Q
      ||||  |||||||||||||| |||| | |||||||    
T  7515285 --ggcgacgtttgatttcgcgtcttgtcgcggtgttt 7515251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 462
Target Start/End: Complemental strand, 28635192 - 28635117
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||||||| ||||||||||||| ||||||||||||| ||| | |||| |||||| ||||| || ||||||||||||    
T  28635192 tgttgttcgtcgtcttgtacggtgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagat 28635117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 478
Target Start/End: Original strand, 34222793 - 34222876
Alignment:
Q  396 tcgtcttgtacggcgttg-tttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatca 478  Q
    |||||||||||| ||||| |||||||||| || |||||||||| || |||||||| ||| |||||||||| ||||| |||||||    
T  34222793 tcgtcttgtacgacgttgttttgatttcgtgtcttgttgtggttttcatttggttcataatgaaagatcaacttcattcaatca 34222876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 331 - 523
Target Start/End: Complemental strand, 29320034 - 29319845
Alignment:
Q  331 tatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttg 430  Q
    |||||||| ||| ||||||||| ||||  |||||| |||||||  ||||| ||||||||||||| || |||| | ||||   |||||||||||||| |||    
T  29320034 tatcaagtttttccttttgtgtttttttgtgattttgtcgtctaagtgcggcgttgtgttgttcgtcctcttatgcggc---gtttgatttcgcgtcttg 29319938  T
Q  431 ttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    | | ||||||| ||   || |||||||||||||  | ||| ||||| ||| ||||||   |||||||| ||| ||| |||| | |||||||||    
T  29319937 tcgcggtgtttgttaacttcatattgaaagatctacatcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcaaatccggaag 29319845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 32059798 - 32059924
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttctt-ttgtgtattttcatgatttcgtcgtctgtgtgcgacgtt 385  Q
    ||||||| | ||| ||||||||||||||||||  ||| || || |||||||| |||| || || ||| ||||  ||||||| ||||||  ||| ||||||    
T  32059798 tctttttcccttttctttcaatctaaataagtagttttcacatgtatcaagtttttttttcttctgtttttttgtgatttcttcgtctaagtgtgacgtt 32059897  T
Q  386 gtgttgttcatcgtcttgtacggcgtt 412  Q
    ||||||||| ||||||||| |||||||    
T  32059898 gtgttgttcgtcgtcttgtgcggcgtt 32059924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 360 - 470
Target Start/End: Complemental strand, 34185823 - 34185713
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||| |||| || ||||| | ||||| ||||  |||||||||  | ||||||||||||| |||| |||||||||||||  ||| ||| |||||||||    
T  34185823 tgatttcatcgtttgagtgcggcattgtgctgtttgtcgtcttgtgtgacgttgtttgattttgcgtcttgttgtggtgttcttttagttcatattgaaa 34185724  T
Q  460 gatcagcttca 470  Q
    ||||| |||||    
T  34185723 gatcaacttca 34185713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 22571358 - 22571442
Alignment:
Q  265 atctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgt 350  Q
    ||||||||||| ||||| | || |||||||| | | ||||  |||||||||||||||||||| ||||||||||| |||||||||||    
T  22571358 atctagaatcaaccatctgcat-cttttttcctcttcttttgatctaaataagtgatttccacatatatcaagttttttcttttgt 22571442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 34489254 - 34489327
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 458  Q
    |||||||||| ||||||||| || |||||||||||||| | | ||||||||||||| ||||| || ||||||||    
T  34489254 tgtgttgttcgtcgtcttgtgcgacgttgtttgatttcccatattgttgtggtgttcatttgattcatattgaa 34489327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 23947389 - 23947313
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||| | | || ||| |||||| ||||| || |||||||||||||    
T  23947389 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccatctttttgcggtgttcatttgattcatattgaaagatc 23947313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 463
Target Start/End: Original strand, 25337574 - 25337652
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||| ||||||||  ||| ||||||||||||  ||| |||||| |||||| ||||| || |||||||||||||    
T  25337574 tgtgttgttcgtcgtcttgcgcggtgttgtttgatttttcgtcttgttgcggtgttcatttgattcatattgaaagatc 25337652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 4984638 - 4984562
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||| ||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  4984638 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgaggtgttcatttgattcatattgaaagatc 4984562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 8496973 - 8497049
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| || |||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  8496973 tgttgttcgtcatcttgtgcggcgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattgaaagatc 8497049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 12652950 - 12653026
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||||||||||| ||||||||||||||||  | | ||  || |||||| ||||| || |||||||||||||    
T  12652950 tgttgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatc 12653026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 33110617 - 33110693
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||||||||||| ||| ||||||||||||| ||| ||  || |||||| ||||| || ||||| |||||||    
T  33110617 tgttgttcatcgtcttgtgcggtgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattaaaagatc 33110693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 523
Target Start/End: Original strand, 3355074 - 3355240
Alignment:
Q  354 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaata 453  Q
    |||| |||||||| ||||||  |||||  |||||||||||| || ||||||   | |  |||||||||||||| |||||||||||||  ||| |||  ||    
T  3355074 tttttatgatttcatcgtctaagtgcggtgttgtgttgttcgtcctcttgt---gtgacgtttgatttcgcgtcttgttgtggtgttcgtttagttccta 3355170  T
Q  454 ttgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||||||| ||  | ||| ||||| | | |||||||  |||||||||||| |||  ||| |||||||||||    
T  3355171 ttgaaaggtcgacatcagtcaattataaattcaatgaatgatttggacgtcaactttgcagatccggaag 3355240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 422
Target Start/End: Original strand, 4088466 - 4088501
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttc 422  Q
    |||||||||||||||||| |||||||||||||||||    
T  4088466 tgttgttcatcgtcttgtgcggcgttgtttgatttc 4088501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 462
Target Start/End: Original strand, 10228685 - 10228760
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || |||||||||| ||||  ||  |||||||||||    
T  10228685 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttatttctattgaaagat 10228760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 523
Target Start/End: Original strand, 12170481 - 12170591
Alignment:
Q  413 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgt 512  Q
    |||||||||||||| |||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   |||||||||| | ||| ||||     
T  12170481 gtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgc 12170580  T
Q  513 agatccggaag 523  Q
    |||||||||||    
T  12170581 agatccggaag 12170591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 470
Target Start/End: Complemental strand, 13546788 - 13546683
Alignment:
Q  362 atttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaaga 461  Q
    |||||||||| || ||||| ||||||||||||| ||||||| | ||||   ||||||||| |||  ||||||| |||||  ||||| | || ||||||||    
T  13546788 atttcgtcgtttgagtgcggcgttgtgttgttcgtcgtcttatgcggc---gtttgattttgcgccttgttgtagtgttcgtttggatcattttgaaaga 13546692  T
Q  462 tcagcttca 470  Q
    ||| |||||    
T  13546691 tcaacttca 13546683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 5417212 - 5417155
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc-ttgtacggcgttgttt 416  Q
    |||||||||||||| ||||||||||||  |||||| ||||| |||| |||||||||||    
T  5417212 tgatttcgtcgtctttgtgcgacgttggtttgttcgtcgtctttgtgcggcgttgttt 5417155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 433
Target Start/End: Complemental strand, 31575637 - 31575564
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttg 433  Q
    |||||||||| ||||  ||||  ||| |||||||||||||| ||| || |||||||||||||| ||| ||||||    
T  31575637 tgatttcgtcatctgaatgcggtgttatgttgttcatcgtcatgtgcgacgttgtttgatttctcgtcttgttg 31575564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 464
Target Start/End: Original strand, 35001596 - 35001673
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  ||  |||||||||||||    
T  35001596 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatca 35001673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 373
Target Start/End: Original strand, 12170400 - 12170471
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtct 373  Q
    ||||||||||||||||||| ||| || || |||||||| |||  |||||||| ||||  ||||||||||||||    
T  12170400 ctttcaatctaaataagtggttttcacatctatcaagtttttcgttttgtgt-tttttgtgatttcgtcgtct 12170471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 348
Target Start/End: Original strand, 14801074 - 14801158
Alignment:
Q  264 gatctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttctttt 348  Q
    ||||||||||||||| || ||||  ||||| |  || |||||||||||||||||| |||| || ||| ||||||| |||| ||||    
T  14801074 gatctagaatcacccctctgtatattttttcccctttctttcaatctaaataagtaattttcacatacatcaagttttttttttt 14801158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 459
Target Start/End: Original strand, 16419164 - 16419236
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  || |||||||||    
T  16419164 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcatattgaaa 16419236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 33543693 - 33543657
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgattt 421  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  33543693 tgtgttgttcgtcgtcttgtgcggcgttgtttgattt 33543657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 301 - 519
Target Start/End: Original strand, 22300768 - 22300987
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtg-tattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    |||||||| |||||||||||||| ||  ||||||||||| ||||||||||  | ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22300768 ctttcaatttaaataagtgattttcacgtatatcaagtgctttcttttgtacttttttcgtgatttcgtcgtctgtgtgcgacgttgtgttgttcgtcgt 22300867  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    ||||| |||||||||||||||||||||  ||||| ||||||| ||| | | || ||||||||||||||| | ||||||||| ||||||| ||||||||||    
T  22300868 cttgtgcggcgttgtttgatttcgcgtcctgttgcggtgtttgtttagctcatcttgaaagatcagctttagtcaatcacagattcaatcgatgatttgg 22300967  T
Q  500 acgccaatgttgtagatccg 519  Q
    ||||| | |||| |||||||    
T  22300968 acgccgacgttgcagatccg 22300987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 264 - 523
Target Start/End: Original strand, 52944198 - 52944453
Alignment:
Q  264 gatctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgat 363  Q
    |||||| ||||| || || ||||  ||||| | ||| ||||||||||||||||||||||| || |||||    |||||||||||||||  ||||| ||||    
T  52944198 gatctaaaatcatccctctgtatcatttttcccttttctttcaatctaaataagtgattttcacatata----gtgttttcttttgtgctttttcgtgat 52944293  T
Q  364 ttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    ||||| ||||| ||||| ||||||||||||| |||| |||| ||||||||||| |||| |||| |||||| ||||||  |||| || |||||||||||||    
T  52944294 ttcgtagtctgagtgcggcgttgtgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatattgaaagatc 52944393  T
Q  464 agcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||||||| ||||||||| ||||||| ||||||||||||| ||| |||| |||||||||||    
T  52944394 agcttcagtcaatcacagattcaatcgatgatttggacgtcaacgttgcagatccggaag 52944453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 316 - 523
Target Start/End: Original strand, 28857339 - 28857544
Alignment:
Q  316 agtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtt 415  Q
    |||||||| || |||||||||||||||||||  |||| ||||  ||||||| ||||||  ||||| ||||||||||||| | ||||||| ||||||||||    
T  28857339 agtgattttcacatatatcaagtgttttctt--gtgtttttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtt 28857436  T
Q  416 tgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtaga 515  Q
    ||||| ||||| | |||| ||||||  |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||  |||    
T  28857437 tgattccgcgtctagttgcggtgttcgtttgtttcatattgaaagatcagcttcagtcaatcacatattcaattgatgatttggacgccaacgtttcaga 28857536  T
Q  516 tccggaag 523  Q
    ||||||||    
T  28857537 tccggaag 28857544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 307 - 497
Target Start/End: Complemental strand, 51888396 - 51888204
Alignment:
Q  307 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt--catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 404  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||| ||||  | ||||||||| ||||| ||||| ||||||||||||||||||||| |    
T  51888396 atctaaacaagtgattttcacatatatcaagtgttttcttttgtgttttttttcgtgatttcgttgtctgagtgcggcgttgtgttgttcatcgtcttat 51888297  T
Q  405 acggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 497  Q
     || |||||||||||||||| | |||||| ||||||  ||||||| |||||||||||||| ||||||||||||||| ||| |||  |||||||    
T  51888296 gcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggttcatattgaaagatcaacttcaatcaatcacaaatttaatcaatgattt 51888204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 301 - 524
Target Start/End: Original strand, 9643304 - 9643531
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt----catgatttcgtcgtctgtgtgcgacgttgtgttgttcat 396  Q
    ||||| ||||||||||||||||| || |||||||| |||||||||||||||| |||     | | ||||||||||| | ||||||||||||||||||| |    
T  9643304 ctttcgatctaaataagtgattttcacatatatcatgtgttttcttttgtgtttttgttcccgtaatttcgtcgtccgagtgcgacgttgtgttgttcgt 9643403  T
Q  397 cgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 496  Q
    |||||||  || |||||||||||||| | | ||||||  |||||  ||||||| ||||| |||||||| ||||| |||||||||||||||||| ||||||    
T  9643404 cgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatattaaaagatcaacttcagtcaatcacatattcaattaatgatt 9643503  T
Q  497 tggacgccaatgttgtagatccggaagt 524  Q
    || ||  ||||||| |||||||||||||    
T  9643504 tgaacatcaatgttatagatccggaagt 9643531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 267 - 523
Target Start/End: Complemental strand, 36204601 - 36204346
Alignment:
Q  267 ctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttc 366  Q
    |||||||||||| || | ||| | ||| | ||| ||||| || ||||||||||||||||| ||| |||||||||||| |||        ||| |||||||    
T  36204601 ctagaatcacccctctgcattttgtttcctttttctttcgatttaaataagtgatttccacatagatcaagtgttttttttc-------ttcgtgatttc 36204509  T
Q  367 gtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacgg-cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcag 465  Q
    |||||||  ||||| ||||||||||||| ||||| ||||||| |||||||||||||||| | |||||| |||||| |||||||| ||||||||| |||||    
T  36204508 gtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttcatttggttcatattgaaaaatcag 36204409  T
Q  466 cttcaatcaatcacat-----attcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||||| ||||||||||     |||||||  |||||||||||| ||| |||| |||||||||||    
T  36204408 cttcagtcaatcacatcacaaattcaatcaatgatttggacgtcaacgttgcagatccggaag 36204346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 326 - 518
Target Start/End: Complemental strand, 33332735 - 33332541
Alignment:
Q  326 atatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcg 425  Q
    |||||||| |||  ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||  ||| ||||| || ||||||||||||||||     
T  33332735 atatatataaagctttttcttttgtgttttttcgtgatttcgtcgtctgtgtgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgca 33332636  T
Q  426 ttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatcc 518  Q
    | |||||||  ||||||  ||| |||  ||||||||||||| |||||  |||||||| |||||||  |||||||||||| ||| |||| ||||||    
T  33332635 tcttgttgtgcggtgttcgtttcgtttttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 33332541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 267 - 519
Target Start/End: Original strand, 36161603 - 36161849
Alignment:
Q  267 ctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttc 366  Q
    ||||||||||||||| | ||| ||||  |||||| ||||||||||||||||||||||  | |||||||||   |||| |||||||| ||||  |||||||    
T  36161603 ctagaatcacccatctgcatt-ttttcccatttc-tttcaatctaaataagtgatttttacatatatcaa---tttttttttgtgtttttttgtgatttc 36161697  T
Q  367 gtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagc 466  Q
     ||||||| |||||  ||||| |||||| | ||||||| || |||||||||||||  |||||||||| ||||||  ||| ||| |||| ||||||| ||     
T  36161698 ttcgtctgagtgcgg-gttgttttgttcgttgtcttgtgcgtcgttgtttgattttacgttttgttgcggtgttcgttttgttcatatcgaaagattagt 36161796  T
Q  467 ttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccg 519  Q
    |||| |||||||||||||||||  |||||||||||||||| |||  |||||||    
T  36161797 ttcagtcaatcacatattcaatcaatgatttggacgccaacgttacagatccg 36161849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 287 - 523
Target Start/End: Complemental strand, 22039000 - 22038769
Alignment:
Q  287 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatt-ttcatgatttcgtcgtctgtgtgcgacgtt 385  Q
    |||||||||  || ||||| ||||||||||||||||| || || |||||||| ||||||||||||| || ||| |||||| ||||| || |||     ||    
T  22039000 tcttttttccctttctttctatctaaataagtgattttcacatctatcaagttttttcttttgtgttttattcgtgattttgtcgt-tgagtg-----tt 22038907  T
Q  386 gtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattc 485  Q
    ||||||||| || | ||||  |||||||||||||||||||| ||||||||||| |  ||||||| |||||||||||||  ||||| ||||||||||||||    
T  22038906 gtgttgttcgtccttttgtgtggcgttgtttgatttcgcgtcttgttgtggtgctcgtttggttcatattgaaagatctacttcagtcaatcacatattc 22038807  T
Q  486 aattgatgatttggacgccaatgttgtagatccggaag 523  Q
    |||  ||||||| |||  |||||||| |||||| ||||    
T  22038806 aataaatgattttgacatcaatgttgcagatccagaag 22038769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 303 - 502
Target Start/End: Complemental strand, 48351367 - 48351174
Alignment:
Q  303 ttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 402  Q
    ||||||| |||||||||||||||||  ||  ||||| ||||||| ||| | ||||| ||||| ||||||||| |||||| ||||||||||| ||||||||    
T  48351367 ttcaatccaaataagtgatttccatgcat--caagttttttcttgtgttt-ttttcgtgatt-cgtcgtctgagtgcgatgttgtgttgtttatcgtctt 48351272  T
Q  403 gtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacg 502  Q
    ||  ||  |||||||||||||||| ||||   ||||||  ||||||| |||||||||||||||||||| ||||||||||||||||   ||||||||||||    
T  48351271 gt--gggcttgtttgatttcgcgtcttgtcacggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatattcaacctatgatttggacg 48351174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 9713831 - 9714054
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttc-ttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||| | ||||||||||||| ||  |   |||||||||||  |||    
T  9713831 ctttcaatctaaataagtgatttccacatatatcaagttttttctttttgtgttttttctttatttcgtcgtctgagtaaggttttgtgttgttcgccgt 9713930  T
Q  400 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
    | ||| || |||||||||||||| | | |||||| || |||  |||  || |||||| |||||||||||||| |||||||| |||||||  | |||||||    
T  9713931 catgtgcgacgttgtttgatttcacatattgttgcggagttcgtttctttcatattggaagatcagcttcaaacaatcacaaattcaatcaacgatttgg 9714030  T
Q  500 acgccaatgttgtagatccggaag 523  Q
     || ||| |||| ||||| |||||    
T  9714031 gcgtcaacgttgcagatctggaag 9714054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 355 - 498
Target Start/End: Original strand, 36194679 - 36194826
Alignment:
Q  355 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggtta 450  Q
    |||| ||||||||| ||||  ||||||||||||||||||| ||||||||| ||||||||||||||||||| |  ||||||||  ||||||  |||||||     
T  36194679 tttcgtgatttcgttgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttc 36194778  T
Q  451 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 498  Q
     |||||||||||||||||||| |||||||| |||||||  ||||||||    
T  36194779 gtattgaaagatcagcttcaaacaatcacaaattcaatcaatgatttg 36194826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 22611107 - 22611325
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| | | ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  22611107 ctttcaatctaaataagtggttttcacatctatcaagtttatccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 22611205  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   ||||||||| ||||||||| | ||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  22611206 ttgtgcggc---gtttgattttgcgttttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 22611302  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  22611303 cgtcaacgttgcagatccggaag 22611325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 344 - 523
Target Start/End: Complemental strand, 6155370 - 6155193
Alignment:
Q  344 cttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttat 443  Q
    ||||||||| ||||| ||||||||||||||| |||||  |||||||||| | || |||||| || ||||||||||||||| ||||||| |  |||||  |    
T  6155370 cttttgtgt-ttttcgtgatttcgtcgtctgagtgcggtgttgtgttgt-cgtcatcttgtgcgtcgttgtttgatttcgtgttttgtcgcagtgttcgt 6155273  T
Q  444 ttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    ||| || ||||||||||||||| |||| |||||||||| |||||| |||||||| ||||  || |||| |||||||||||    
T  6155272 ttgattcatattgaaagatcagtttcagtcaatcacatgttcaatcgatgatttagacgtaaacgttgcagatccggaag 6155193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 301 - 522
Target Start/End: Original strand, 13634039 - 13634256
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  13634039 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgt-tttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 13634137  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||   |||  ||| |||||||||| |||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   | ||||||||    
T  13634138 ttgt---gcgaggttagatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaacgatttgga 13634234  T
Q  501 cgccaatgttgtagatccggaa 522  Q
    || ||| |||| ||||||||||    
T  13634235 cgtcaacgttgcagatccggaa 13634256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 26633856 - 26633638
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  26633856 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgt-tttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 26633758  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| |||| |||   || ||||||| |||| |  |||||| ||  |||  ||||||||||||  | ||| || || ||| ||||||   ||||||||||    
T  26633757 ttgtgcggcattg---gacttcgcgtcttgtcgcagtgtttgttcagttcctattgaaagatctacatcagtcgattacaaattcaaccaatgatttgga 26633661  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || |||||||| |||||||||||    
T  26633660 cgtcaatgttgcagatccggaag 26633638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 301 - 522
Target Start/End: Original strand, 32766438 - 32766655
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||| |||||| ||| || || |||||||| ||| |||||  || ||||  ||||||||||||||  |||||  |||||||||||| |||||    
T  32766438 ctttcaatctaagtaagtgtttttcacatctatcaagtttttcctttttggttttttg-tgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtc 32766536  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| |||||||   |||||||||||||||| | ||||||| ||  |||  |||| |||||||  | ||| ||||| ||| |||||||  ||||||||||    
T  32766537 ttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatctacatcagtcaattacaaattcaatcaatgatttgga 32766633  T
Q  501 cgccaatgttgtagatccggaa 522  Q
    || |||||||| ||||||||||    
T  32766634 cgtcaatgttgcagatccggaa 32766655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 301 - 518
Target Start/End: Complemental strand, 4142939 - 4142724
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| |||| | || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  4142939 ctttcaatctaaataagtgttttc-acatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 4142842  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| |||||  ||||||||||| ||||||| | ||||||| ||   ||  | ||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  4142841 ttgtgcggcggcgtttgatttcgtgttttgtcgcggtgtttgttcaattcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 4142742  T
Q  501 cgccaatgttgtagatcc 518  Q
    || ||| |||| ||||||    
T  4142741 cgtcaacgttgcagatcc 4142724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 517
Target Start/End: Original strand, 18048809 - 18049019
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| ||||||||||||||||| ||     |||||||||||||||||  |||| | ||||||||| || |  ||||  |||||||||||  |||||    
T  18048809 ctttcaatttaaataagtgatttccacat-----aagtgttttcttttgtgctttttga-gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtc 18048902  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||  ||||||||||||||| |||  |||||| ||||||  |||| || |||||||||||| ||||||| ||||||| | ||||||| ||| |||| ||    
T  18048903 ttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatcatagattcaatcgataattttga 18049002  T
Q  501 cgccaatgttgtagatc 517  Q
    |  |||||||| |||||    
T  18049003 catcaatgttgcagatc 18049019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 21686426 - 21686209
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| || |||||||||| |||||    
T  21686426 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgt-tttttgtgatttcgtcgtctaagtgcggcg-tgtgttgttcgtcgtc 21686329  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   |||||||||||||| |||  | ||||||| ||  |||  ||||||||||||  | ||||||| | ||| ||||||   ||||||||||    
T  21686328 ttgtgcggc---gtttgatttcgcgtcttgccgcggtgtttgttcagttcctattgaaagatctacatcaatcagttacaaattcaagcaatgatttgga 21686232  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  21686231 cgtcaacgttgcagatccggaag 21686209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 301 - 463
Target Start/End: Original strand, 35348229 - 35348389
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatg--atttcgtcgtctgtgtgcgacgttgtgttgttcatcg 398  Q
    ||||||||||||||||||| ||| || | ||||||||| ||||||||||||| ||||  ||  ||||||||||||  ||||| ||||||||||||| |||    
T  35348229 ctttcaatctaaataagtggttttcacaaatatcaagt-ttttcttttgtgtttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcg 35348327  T
Q  399 tcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||| ||||   |||||||||||  | |||||||||||||  ||| |||| ||||||||||||    
T  35348328 tcttgtgcggc---gtttgatttcgtttcttgttgtggtgttcgtttagttactattgaaagatc 35348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 355 - 499
Target Start/End: Original strand, 27651914 - 27652062
Alignment:
Q  355 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggtta 450  Q
    |||| ||||||||||||||  |||| |||||||||||||| ||||||||| ||| ||||||||||||||| |  ||||||||  ||||||  |||||||     
T  27651914 tttcgtgatttcgtcgtcttagtgcaacgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttc 27652013  T
Q  451 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
     ||||||||||||||||| |  |||||||| |||||||  |||||||||    
T  27652014 gtattgaaagatcagctttagacaatcacaaattcaatcaatgatttgg 27652062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 303 - 523
Target Start/End: Original strand, 2520703 - 2520921
Alignment:
Q  303 ttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgt--tgtgttgttcatcgtc 400  Q
    ||||||||||||||||| ||| || || |||||||| ||||||||||||| ||||  ||||||||||||||  |||||  ||  |||||||||| |||||    
T  2520703 ttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgt-tttttgtgatttcgtcgtctaagtgcggtgttgtgtgttgttcgtcgtc 2520801  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   ||||||||||||||||||| | | ||||| ||   ||  ||||||||||||  | ||||||||| ||| ||| ||   ||||||||||    
T  2520802 ttgtgcggc---gtttgatttcgcgttttgtcgcgatgtttgttcaattcctattgaaagatctacatcaatcaattacaaattaaagcaatgatttgga 2520898  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  2520899 cgtcaacgttgcagatccggaag 2520921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 320 - 433
Target Start/End: Complemental strand, 42032691 - 42032578
Alignment:
Q  320 atttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgat 419  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||  | ||||| |||| | ||||| |||||||||| ||  ||||||||||    
T  42032691 atttccatatatatcaagtcttttcttttgtgttttttcgtgatttcttcgttcgagtgcggcgttattttgttaatcgtcttgtgcgatgttgtttgat 42032592  T
Q  420 ttcgcgttttgttg 433  Q
    ||||||| ||||||    
T  42032591 ttcgcgtcttgttg 42032578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 362 - 502
Target Start/End: Complemental strand, 52934072 - 52933931
Alignment:
Q  362 atttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgttta-tttggttaatattgaaag 460  Q
    ||||| ||||||| ||||| ||||||||||||| || | |||| | ||||||||||||||||| | |||||| |||| ||| |||| || ||||||||||    
T  52934072 atttcatcgtctgagtgcggcgttgtgttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgttgcggtgcttattttgattcatattgaaag 52933973  T
Q  461 atcagcttcaatcaatcacatattcaattgatgatttggacg 502  Q
    ||||||||||||| |||| | |||||||  || |||||||||    
T  52933972 atcagcttcaatcgatcaaagattcaatcaataatttggacg 52933931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 360 - 523
Target Start/End: Original strand, 53444100 - 53444260
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||  || |||||||||||||||| ||||||||| |||   | |||||||||||||||||| | ||||||| |||  ||  ||||||||    
T  53444100 tgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcgg---tatttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaa 53444196  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
    |||| || ||| ||||| ||| ||||||   ||||||||| || |||||||| |||||||||||    
T  53444197 gatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaatgttgaagatccggaag 53444260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 376 - 460
Target Start/End: Original strand, 43853437 - 43853521
Alignment:
Q  376 gtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaag 460  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||||||||| |||||| |||| | |||||||| ||||||||||    
T  43853437 gtgcgacattgtgttgttcatcatcttgtgcggcgttgtttgatttcgcgtattgttgcggtgctcatttggttcatattgaaag 43853521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 487
Target Start/End: Complemental strand, 31891441 - 31891290
Alignment:
Q  340 ttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgt--g 435  Q
    |||||||| |||| ||||| ||||||||||||||  ||||||||||||||||||| |||||||||   ||||||||||||||||| |   |||||||  |    
T  31891441 ttttctttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgtagcgttgtttgatttcgcatccgttgttgtgcg 31891342  T
Q  436 gtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaa 487  Q
    |||||  |||||||  |||||||| ||||| ||||  |||||||| ||||||    
T  31891341 gtgttcgtttggttcgtattgaaaaatcagtttcagacaatcacaaattcaa 31891290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 53810952 - 53811170
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||||||| || || ||||||||  || ||||||||| ||||  | |||||||| |||   |||| |||| |||||||| |||||    
T  53810952 ctttcaatttaaataagtgattttcacatctatcaagttattccttttgtgt-tttttgtcatttcgtcatctaaatgcggcgttttgttgttcgtcgtc 53811050  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   ||||||||||||||||||| | || |||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  53811051 ttgtgcggc---gtttgatttcgcgttttgtcgcggggtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 53811147  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| |||||||||||    
T  53811148 cgtcaacgttgcagatccggaag 53811170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 521
Target Start/End: Complemental strand, 38166430 - 38166199
Alignment:
Q  289 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttctt----ttgtgtattttcatgatttcgtcgtctgtgtgcgacgt 384  Q
    |||||||  |||||||| ||||||| ||||||||| || |||||||||||||| ||||    || | | ||||  ||||||||||||||| ||||| |||    
T  38166430 ttttttccattcctttcgatctaaacaagtgattttcacatatatcaagtgttgtcttctggttttttttttttgtgatttcgtcgtctgagtgcggcgt 38166331  T
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatatt 484  Q
    |||||||||| | |||||     ||| ||||||||||| | | || ||||||||||| |||| || |||||||||||||| ||| | | ||||| | |||    
T  38166330 tgtgttgttcgttgtctt----tgcgctgtttgatttcacatcttattgtggtgtttgtttgatttatattgaaagatcaactt-agttaatcatagatt 38166236  T
Q  485 caattgatgatttggacgccaatgttgtagatccgga 521  Q
    |||   |||||||||||  ||| |||| |||||||||    
T  38166235 caagcaatgatttggacatcaacgttgcagatccgga 38166199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 385 - 462
Target Start/End: Original strand, 2624512 - 2624589
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||||||||| ||||||||| |||||| |||||||||| ||| |||||| |||||||||||| || ||||||||||||    
T  2624512 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaaagat 2624589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 523
Target Start/End: Complemental strand, 19853693 - 19853479
Alignment:
Q  305 caatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 404  Q
    ||||||||||||||| ||| || || |||||||| ||||||||| ||| ||||  ||||||||||||||  ||||| ||||||||||||| ||||||| |    
T  19853693 caatctaaataagtggttttcacatctatcaagttttttcttttttgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttat 19853595  T
Q  405 acggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcc 504  Q
      |||    |||||||| ||||||| |   ||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   |||||||||||| |    
T  19853594 gtggc---atttgattttgcgttttatcacggtgtttgttcagttcctattgaaagatctacatcactcaattacaaattcaaccaatgatttggacgtc 19853498  T
Q  505 aatgttgtagatccggaag 523  Q
    || |||| |||||||||||    
T  19853497 aacgttgcagatccggaag 19853479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 47158139 - 47158207
Alignment:
Q  289 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt 357  Q
    |||||||| || |||||||| ||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  47158139 ttttttcactttctttcaatttaaataagtgatttccacatatatcaagttttttcttttgtgtttttt 47158207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 376 - 499
Target Start/End: Complemental strand, 1621619 - 1621495
Alignment:
Q  376 gtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgtg--gtgtttatttggttaatattgaaagatcagcttcaa 471  Q
    ||||||||||||||||| | |||||||||   ||||||||||||||||| |  |||||||||  |||||  |||||||  ||||||||||||||||||||    
T  1621619 gtgcgacgttgtgttgtccgtcgtcttgt---gcgttgtttgatttcgcatcctttgttgtgtggtgttcgtttggttcgtattgaaagatcagcttcaa 1621523  T
Q  472 tcaatcacatattcaattgatgatttgg 499  Q
     |||||| | |||||||  |||||||||    
T  1621522 acaatcataaattcaatcaatgatttgg 1621495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 522
Target Start/End: Complemental strand, 24099255 - 24099035
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttc--atgatttcgtcgtctgtgtgcgacgttgtgttgttcatcg 398  Q
    ||||||||||||||||||||||| || || ||||||||  |   |||||| | ||||   |||||||||||||||  ||||| | || |||||||| |||    
T  24099255 ctttcaatctaaataagtgattttcacatctatcaagttgtccattttgtatttttttgtatgatttcgtcgtctaagtgcggcattttgttgttcgtcg 24099156  T
Q  399 tcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 498  Q
    |||||| ||||| |   ||||||||||| |||| | || |||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||    
T  24099155 tcttgtgcggcgat---tgatttcgcgtcttgtcgcggagtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttg 24099059  T
Q  499 gacgccaatgttgtagatccggaa 522  Q
    |||| ||| |||| ||||||||||    
T  24099058 gacgtcaacgttgcagatccggaa 24099035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 488
Target Start/End: Complemental strand, 31359950 - 31359749
Alignment:
Q  289 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatg--atttcgtcgtctgtgtgcgacgttg 386  Q
    ||||| ||||| |||||||||||||||| | ||||||| || |||||||| ||||||| ||| | || ||  |  |||||||  |||| ||| |  ||||    
T  31359950 tttttccattttctttcaatctaaataaattatttccacatttatcaagttttttcttgtgttttttctctcgcaatttcgtaatctgagtgtggtgttg 31359851  T
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 486  Q
    |||| ||| ||||||||| || |||||| ||||||| ||| ||||||  ||||||  ||||||  |||| |||||||| ||| | ||||||||| |||||    
T  31359850 tgttattcgtcgtcttgtgcgacgttgtatgatttcacgtcttgttgcagtgtttgcttggttcctatttaaagatcaactttagtcaatcacagattca 31359751  T
Q  487 at 488  Q
    ||    
T  31359750 at 31359749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 464
Target Start/End: Original strand, 868180 - 868257
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||| ||||||||| ||||||||||||||||| ||| || ||| |||||| ||||| || ||||||||||||||    
T  868180 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatca 868257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 302 - 440
Target Start/End: Complemental strand, 29120547 - 29120413
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||||||||||||||||| ||| || |||||||   | |||  |||||||| ||||  ||||||||||||||  ||||| || |||||||||||||||||    
T  29120547 tttcaatctaaataagtggttttcacatatatccgatttttctttttgtgttttttg-tgatttcgtcgtctaagtgcggcgctgtgttgttcatcgtct 29120449  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtt 440  Q
    |||||| |   |||||||||||||| ||||  |||||||    
T  29120448 tgtacgac---gtttgatttcgcgtcttgtcatggtgtt 29120413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 394
Target Start/End: Original strand, 33920984 - 33921067
Alignment:
Q  310 taaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 394  Q
    |||||||||||||| || ||||||||||| ||||||||||||  ||||  ||||||||||||||  ||||| |||||||||||||    
T  33920984 taaataagtgattttcacatatatcaagttttttcttttgtg-ctttttgtgatttcgtcgtctaagtgcggcgttgtgttgttc 33921067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 470
Target Start/End: Original strand, 4937757 - 4937922
Alignment:
Q  303 ttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 402  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||| ||| |||   ||||||| ||||||| || ||||||||| ||||   |||| |     
T  4937757 ttcaatctaaataagtgattttcatatatattaagttttttcttttttgt-tttgtgtgatttcttcgtctgagtacgacgttgtcttgtatgtcgt-ta 4937854  T
Q  403 gtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttca 470  Q
    || ||||||||||||||||  | | |||||| || |||  |||| ||  ||||||||||||| |||||    
T  4937855 gtgcggcgttgtttgattttacatcttgttgcggagttcgtttgatttttattgaaagatcaacttca 4937922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 409
Target Start/End: Complemental strand, 29961109 - 29961002
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||||||||||||||||||||| || || |||||||| ||| ||||||||| ||||  | ||||| ||||||  ||| |  |||||||||||| ||||||    
T  29961109 tttcaatctaaataagtgattttcacatctatcaagtttttccttttgtgttttttttttatttcatcgtctaagtgtggggttgtgttgttcgtcgtct 29961010  T
Q  402 tgtacggc 409  Q
    ||| ||||    
T  29961009 tgtgcggc 29961002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 440
Target Start/End: Original strand, 37683878 - 37683949
Alignment:
Q  369 cgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtt 440  Q
    |||||| ||||| |||||||||||||||||||||||   | ||||||||||||||||| |||||| ||||||    
T  37683878 cgtctgagtgcggcgttgtgttgttcatcgtcttgtgtagagttgtttgatttcgcgtcttgttgcggtgtt 37683949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 412
Target Start/End: Original strand, 44596588 - 44596698
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||  ||||| || ||||| ||||| |||| |||||||||||||  ||||||| ||||||  ||| |||||||| |||||| |||||    
T  44596588 ctttcaatttaaataaccgattttcacatataacaagttttttgttttgtgtatttt-gtgatttcctcgtctaagtgtgacgttgtattgttcgtcgtc 44596686  T
Q  401 ttgtacggcgtt 412  Q
    |||| |||||||    
T  44596687 ttgtgcggcgtt 44596698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 421
Target Start/End: Complemental strand, 47320581 - 47320460
Alignment:
Q  307 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcat-------gatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 399  Q
    ||||||||||||||||| || | |||||||| |||||||||||||| ||||  |       |||||||||||||  ||  ||| ||||||||||| ||||    
T  47320581 atctaaataagtgattttcacaaatatcaagcgttttcttttgtgttttttttttttttgtgatttcgtcgtctaagtaagaccttgtgttgttcgtcgt 47320482  T
Q  400 cttgtacggcgttgtttgattt 421  Q
    ||||| ||||||||||||||||    
T  47320481 cttgtgcggcgttgtttgattt 47320460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 419
Target Start/End: Complemental strand, 35395861 - 35395741
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaa-gtgttttcttttgtgtattttcatg--atttcgtcgtctgtgtgcgacgttgtgttgttcatc 397  Q
    |||| ||| |||||||||||||| ||| || ||||| ||||| |||| ||| ||||||  ||  ||||||||||||| ||||| ||||||||||||| ||    
T  35395861 cttttaatgtaaataagtgattttcatgtacatcaaagtgttctcttatgt-tattttgttgtaatttcgtcgtctgagtgcggcgttgtgttgttcgtc 35395763  T
Q  398 gtcttgtacggcgttgtttgat 419  Q
    ||||||| || |||||||||||    
T  35395762 gtcttgttcgacgttgtttgat 35395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 463
Target Start/End: Original strand, 44947441 - 44947506
Alignment:
Q  398 gtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    ||||||| ||||||||||||||||| ||| ||  ||||||||| ||||| ||||||||||||||||    
T  44947441 gtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcatttgattaatattgaaagatc 44947506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 464
Target Start/End: Complemental strand, 53616721 - 53616644
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || ||||||||||||||    
T  53616721 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatca 53616644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 519
Target Start/End: Original strand, 54021785 - 54021998
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || ||||||| ||| ||| ||||||||  ||||  ||||||||| ||||   |||| | ||||||||||  |||||    
T  54021785 ctttcaatctaaataagtggttttcacatatatccagtttttccttttgtg--tttttgtgatttcgttgtctaattgcggcattgtgttgttagtcgtc 54021882  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   ||||||||||| || |||| | ||||||  ||| |||  ||||||||||||  | ||| ||||| ||| ||| |||  ||||||||||    
T  54021883 ttgtgcggc---gtttgatttcgtgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaaattgaatcaatgatttgga 54021979  T
Q  501 cgccaatgttgtagatccg 519  Q
     | ||| |||| |||||||    
T  54021980 tgtcaacgttgcagatccg 54021998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 4643876 - 4643952
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  4643876 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 4643952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 440
Target Start/End: Complemental strand, 17949508 - 17949374
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||||||  ||||||||| ||| || | ||||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||  |||| |    
T  17949508 tttcaatagaaataagtggttttcacacatatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgt 17949410  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtt 440  Q
    ||| ||||   ||||||||| ||||||||| | ||||||    
T  17949409 tgtgcggc---gtttgattttgcgttttgtcgcggtgtt 17949374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 440
Target Start/End: Complemental strand, 17953360 - 17953226
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    |||||||  ||||||||| ||| || | ||||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||  |||| |    
T  17953360 tttcaatagaaataagtggttttcacacatatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgt 17953262  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtt 440  Q
    ||| ||||   ||||||||| ||||||||| | ||||||    
T  17953261 tgtgcggc---gtttgattttgcgttttgtcgcggtgtt 17953226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 22558649 - 22558548
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||  ||||  ||||||  ||||||  ||||| | || ||||||||||||||    
T  22558649 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg--tttttgtgattttatcgtctaagtgcggcattttgttgttcatcgtc 22558552  T
Q  401 ttgt 404  Q
    ||||    
T  22558551 ttgt 22558548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 25273901 - 25273977
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  25273901 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 25273977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 501
Target Start/End: Original strand, 37030187 - 37030381
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| ||||||| |||||| || | ||||||||| |||    |||||| ||||  |||||||||| |||| || || ||||||||||||| |||||    
T  37030187 ctttcaatttaaataaatgattttcacacatatcaagttttta---ttgtgtctttttgtgatttcgtcatctgagtacggcgttgtgttgttcgtcgtc 37030283  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||| ||||||   |||||||  || |||| | |||||   |||||||  |||  |||||||| ||||||||||  ||| |||||||  ||||||||||    
T  37030284 ttgtatggcgtt---tgatttcatgtcttgtcgcggtgtacgtttggtttctatcaaaagatcaacttcaatcaaatacagattcaatcaatgatttgga 37030380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 47417680 - 47417756
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  47417680 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 47417756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 52978749 - 52978839
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 394  Q
    |||||||||||||||||||||| || ||||||||||| ||||| |||| || ||||  |||||||| |||||  ||||| |||||||||||||    
T  52978749 tttcaatctaaataagtgattttcacatatatcaagt-ttttcctttgggt-tttttgtgatttcggcgtctaagtgcggcgttgtgttgttc 52978839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 412
Target Start/End: Original strand, 5119263 - 5119373
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| ||||||||| |||   ||||||||||||||  |||||   ||||||||||| | |||    
T  5119263 ctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgt-tttgtgtgatttcgtcgtctaagtgcggtattgtgttgttcgttgtc 5119361  T
Q  401 ttgtacggcgtt 412  Q
    || | |||||||    
T  5119362 ttttgcggcgtt 5119373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 458
Target Start/End: Original strand, 21090170 - 21090241
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 458  Q
    |||||||| |||||||||||| |||||||||||||  |||||| ||| |||||| ||||| || ||||||||    
T  21090170 tgttgttcgtcgtcttgtacgacgttgtttgatttttcgtttttttgcggtgttcatttgattcatattgaa 21090241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 462
Target Start/End: Original strand, 29965653 - 29965728
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || ||||||||||||    
T  29965653 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagat 29965728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 462
Target Start/End: Original strand, 51318003 - 51318078
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||||||| ||||||||| |||| |||||||||||| ||| || ||| |||||| ||||| || ||||||||||||    
T  51318003 tgttgttcgtcgtcttgtgcggcattgtttgatttcccgtcttcttgcggtgttaatttgattcatattgaaagat 51318078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 488
Target Start/End: Complemental strand, 12199820 - 12199695
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||| ||| | |||||||||||||||||| |||| | ||    |||||||| |||| |||||| ||||||  ||| ||| |||||||||    
T  12199820 tgatttcgtcgtctgagtgtggcgttgtgttgttcatcgttttgtgcagc---ttttgattttgcgtcttgttgcggtgttcgtttagttcatattgaaa 12199724  T
Q  460 gatcagcttcaatcaatcacatattcaat 488  Q
     |||| ||||| ||| | ||| |||||||    
T  12199723 tatcaacttcagtcagttacagattcaat 12199695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 463
Target Start/End: Complemental strand, 35965048 - 35964970
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||| ||||| |||  |||||||||||||||| ||| || |||||||||| ||||| || ||||| |||||||    
T  35965048 tgtgttgttcgtcgtcctgtgtggcgttgtttgatttcccgtcttattgtggtgttcatttgattcatattaaaagatc 35964970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 464
Target Start/End: Original strand, 7393217 - 7393354
Alignment:
Q  328 atatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggc-gttgtttgatttcgcgt 426  Q
    |||||||||||  |||||||| ||| ||||| ||||||||||||  | ||||   ||||||||| || ||||||||| || |  |||||||||||| | |    
T  7393217 atatatcaagttgtttcttttatgttttttcgtgatttcgtcgttcgagtgcagtgttgtgttgctcgtcgtcttgttcgacatttgtttgatttcacat 7393316  T
Q  427 tttgttgtggtgtttatttggttaatattgaaagatca 464  Q
     |||||||||||||  |||| ||  |||||||||||||    
T  7393317 cttgttgtggtgttcgtttgattcctattgaaagatca 7393354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 387 - 464
Target Start/End: Original strand, 12265473 - 12265549
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 464  Q
    |||||||| |||||| || ||||||||||||||||| ||| | ||||||||||| | ||| || ||||||||||||||    
T  12265473 tgttgttcgtcgtct-gtgcggcgttgtttgatttctcgtatcgttgtggtgttcacttgattcatattgaaagatca 12265549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 499
Target Start/End: Original strand, 18935777 - 18935900
Alignment:
Q  380 gacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaa 475  Q
    ||||||||| ||||| ||||||||| | ||||||||||||||| | |  ||||||||  ||||||  |||||||  ||||||||||| | |||||  |||    
T  18935777 gacgttgtgctgttcgtcgtcttgtgcagcgttgtttgatttcacatcctttgttgtgcggtgttcgtttggttcgtattgaaagattaacttcagacaa 18935876  T
Q  476 tcacatattcaattgatgatttgg 499  Q
    ||| | |||||||| |||||||||    
T  18935877 tcaaaaattcaattaatgatttgg 18935900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 363 - 404
Target Start/End: Complemental strand, 49072852 - 49072811
Alignment:
Q  363 tttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 404  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  49072852 tttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcttgt 49072811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 9528948 - 9528872
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || | |||| ||||| || |||||||||||||    
T  9528948 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcatattgaaagatc 9528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 10359618 - 10359542
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    ||||||||  |||||| | ||| ||||||||||||| ||| || |||||||||| ||||| || |||||||||||||    
T  10359618 tgttgttcgccgtcttttgcggtgttgtttgatttcccgtcttcttgtggtgttcatttgattcatattgaaagatc 10359542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 459
Target Start/End: Complemental strand, 10389825 - 10389753
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    |||||||| ||||||||| ||||||||||||||||  ||| || ||| |||||| ||||| || |||||||||    
T  10389825 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaaa 10389753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 404
Target Start/End: Complemental strand, 11300150 - 11300074
Alignment:
Q  328 atatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 404  Q
    ||||||||||| ||||| ||||| | ||||  ||||||||||||||  |||||  |||||||||||| |||||||||    
T  11300150 atatatcaagttttttcgtttgtatgtttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgt 11300074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 501
Target Start/End: Original strand, 37465511 - 37465603
Alignment:
Q  409 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
    |||||||||||||| ||| || || |||||||  ||||||| | |||||||||||| ||||  |||||| ||||||||||  || ||||||||    
T  37465511 cgttgtttgatttcacgtcttcttttggtgttcgtttggttcacattgaaagatcatcttcggtcaatcgcatattcaatcaataatttggac 37465603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 43154085 - 43154009
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| |||||||||  |||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  43154085 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 43154009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 441
Target Start/End: Original strand, 43510123 - 43510257
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||||||||||||||  || || || |||||||| ||| |||| ||   ||||  ||||||||||||||  ||||| ||||||||| ||  |||||    
T  43510123 ctttcaatctaaataagtggctttcacatttatcaagtttttcctttcgt---tttttgtgatttcgtcgtctaagtgcggcgttgtgttatttgtcgtc 43510219  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 441  Q
    |||| ||||   ||||||||||| ||||||| | |||||||    
T  43510220 ttgtgcggc---gtttgatttcgtgttttgtcgcggtgttt 43510257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 49410241 - 49410317
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| | ||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  49410241 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 49410317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 412
Target Start/End: Complemental strand, 56040829 - 56040721
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| |||| | |||||| |||   |||||||||||| |  ||||| |||| |||||||| |||||    
T  56040829 ctttcaatctaaataagtggttttcacatctatcaagtttttt-tcttgtgtttttg--tgatttcgtcgtttaagtgcggcgttttgttgttcgtcgtc 56040733  T
Q  401 ttgtacggcgtt 412  Q
    |||| |||||||    
T  56040732 ttgtgcggcgtt 56040721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 488
Target Start/End: Complemental strand, 2069661 - 2069582
Alignment:
Q  409 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 488  Q
    |||||||||||||||| | |||||| ||| || |||||||| ||||||||| ||||| || | ||||||| | |||||||    
T  2069661 cgttgtttgatttcgcatcttgttgcggtattcatttggttcatattgaaatatcagttttagtcaatcatagattcaat 2069582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 9634598 - 9634645
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttctttt 348  Q
    ||||| ||||||||||||||||| || |||||||| ||||||||||||    
T  9634598 ctttcgatctaaataagtgattttcacatatatcatgtgttttctttt 9634645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 326
Target Start/End: Original strand, 28857272 - 28857327
Alignment:
Q  271 aatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttcca 326  Q
    ||||||||||| |||| ||||||   ||||||||||||| ||||||||||||||||    
T  28857272 aatcacccatctgtatcctttttctctttcctttcaatccaaataagtgatttcca 28857327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 463
Target Start/End: Complemental strand, 50766574 - 50766507
Alignment:
Q  396 tcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  50766574 tcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 50766507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 463
Target Start/End: Complemental strand, 18138986 - 18138908
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||| ||||||||| ||||||||||||||||  | | ||||||  ||||| ||||| ||  ||||||||||||    
T  18138986 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatc 18138908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 463
Target Start/End: Complemental strand, 49126199 - 49126121
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||| ||||||||| ||||||||||||||||  | | ||||||  ||||| ||||| ||  ||||||||||||    
T  49126199 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatc 49126121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 421
Target Start/End: Original strand, 14121784 - 14121900
Alignment:
Q  307 atctaaataagtgatttccatatatatcaagtgttttct--tttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 404  Q
    ||||||||||||||||| || ||||| ||||| ||||||  | ||| | ||||| |||||||||||||||   ||| | ||||  ||||| | |||||||    
T  14121784 atctaaataagtgattttcacatataacaagttttttcttctatgttttttttcttgatttcgtcgtctgacggcggcattgtaatgttcgtagtcttgt 14121883  T
Q  405 acggcgttgtttgattt 421  Q
    | | |||||||||||||    
T  14121884 atgacgttgtttgattt 14121900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 465
Target Start/End: Complemental strand, 21365193 - 21365089
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||   |||| ||||||  ||||  |||| |||| |||||||||||||| ||  | ||||||||||| || ||||| || |||||||||    
T  21365193 tgatttcgtcgtctaaatgcgtcgttgttgtgtttgtcgt-ttgtgcggcgttgtttgatatcttgctttgttgtggtattcatttgattcatattgaaa 21365095  T
Q  460 gatcag 465  Q
    ||||||    
T  21365094 gatcag 21365089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 347
Target Start/End: Complemental strand, 37188739 - 37188694
Alignment:
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttt 347  Q
    |||||||||||||||||||||| || ||||||| ||| ||||||||    
T  37188739 tttcaatctaaataagtgattttcacatatatctagttttttcttt 37188694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 402
Target Start/End: Complemental strand, 40066240 - 40066140
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||| ||| || |||| | |||| ||| ||||||||| || |  ||||||| ||||||  ||||| ||||||||||||| |||||    
T  40066240 ctttcaatataaataagtggttttcacatattttaagtttttccttttgtgttttatg-tgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtc 40066142  T
Q  401 tt 402  Q
    ||    
T  40066141 tt 40066140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 9283929 - 9284005
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||  |||||||||  |||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  9283929 tgttgtttgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9284005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 9645622 - 9645586
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgattt 421  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  9645622 tgtgttgttcgtcgtcttgtgcggcgttgtttgattt 9645586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 427 - 515
Target Start/End: Original strand, 22806588 - 22806676
Alignment:
Q  427 tttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtaga 515  Q
    ||||||||||||||  |||||||  | |||||| ||| | |||||||||| | | |||||||  |||||||||||  ||||||||||||    
T  22806588 tttgttgtggtgttcttttggttccttttgaaatatcggattcaatcaattatagattcaatcaatgatttggacatcaatgttgtaga 22806676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 333
Target Start/End: Complemental strand, 33332788 - 33332756
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatat 333  Q
    |||| ||||||||||||||||||||||||||||    
T  33332788 cttttaatctaaataagtgatttccatatatat 33332756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 38706781 - 38706705
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| | ||||||||| ||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  38706781 tgttgttcgtcgtcttgtgcagcgttgtttcatttcccgtcttcgtgcggtgttaatttgatttatattgaaagatc 38706705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 43444411 - 43444487
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| ||||||||||||||||  ||| |   || |||||| ||||| || |||||||||||||    
T  43444411 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttcatttgattcatattgaaagatc 43444487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 56194619 - 56194695
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  ||  ||||||||||||    
T  56194619 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 56194695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 202 - 523
Target Start/End: Complemental strand, 58363 - 58055
Alignment:
Q  202 ttctctctaagttttctttctctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtattcttttttcatttcc 301  Q
    |||||||||||||||| || ||||||| |||| |||||||||  ||||||| |||       || ||| |||||||| || | || |||||||| ||| |    
T  58363 ttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcatttttt-gacctaaaatcacccctctgcatccttttttccttttc 58265  T
Q  302 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 401  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| ||||||| ||||||| ||||| ||||||||||||            
T  58264 tttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgatttcatcgtctgagtgcggcgttgtgttgtt-------- 58173  T
Q  402 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 501  Q
        || |||| |||||||| |||| |||||| ||||||| |||| || ||| |||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  58172 ----cgtcgttttttgattttgcgtcttgttgcggtgtttgtttgtttcatactgaaagatcagcttcagtcaatcacagattcaatcgatgatttggac 58077  T
Q  502 gccaatgttgtagatccggaag 523  Q
    | |||  ||| |||||||||||    
T  58076 gtcaacattgcagatccggaag 58055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 360 - 523
Target Start/End: Original strand, 5989 - 6152
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||| |||| | | |||||||||| ||||||||| ||||||||||||||||||||| |||||| |||||| |||||||| |||||||||    
T  5989 tgatttcgtcgtctgagtgcaatgatgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaaa 6088  T
Q  460 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 523  Q
      | | ||||| |||||||||||||||||  |||||||||| | |||||||| |||||||||||    
T  6089 tgttaacttcagtcaatcacatattcaatcaatgatttggatgtcaatgttgcagatccggaag 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 301 - 518
Target Start/End: Original strand, 93003 - 93224
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttc---atgatttcgtcgtctgtgtgcgacgttgtgttgttcatc 397  Q
    ||||||||||||||||||||||| |   |||||||||| |||||||| || | |||||   |||||||||||||||| ||||  ||||||||||||  |     
T  93003 ctttcaatctaaataagtgatttacgcttatatcaagttttttctttcgttttttttcctcatgatttcgtcgtctgagtgctgcgttgtgttgtttgtt 93102  T
Q  398 gtcttgtacggcgttgtttgat-ttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 496  Q
    ||||||| |||||||||||||| |||| || |||||||||||||  ||||||| ||||||||||||| | |||| ||||||||||||| |||  ||||||    
T  93103 gtcttgtgcggcgttgtttgatattcgtgtcttgttgtggtgttcgtttggttcatattgaaagatcggtttcactcaatcacatattgaatcaatgatt 93202  T
Q  497 tggacgccaatgttgtagatcc 518  Q
     ||||| ||| |||| ||||||    
T  93203 aggacgtcaacgttgcagatcc 93224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 322 - 523
Target Start/End: Complemental strand, 92664 - 92463
Alignment:
Q  322 ttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgattt 421  Q
    ||||| |||||||| | ||||  |||| ||| ||||  ||||||||||||||| ||| |  ||||||||| ||| |||||||| ||  ||||||||||||    
T  92664 ttccacatatatcaggcgtttcattttatgtttttttgtgatttcgtcgtctgagtgtgttgttgtgttgctcaccgtcttgtgcgatgttgtttgattt 92565  T
Q  422 cgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccgga 521  Q
    | ||| |||||||||||||  ||||||| ||||||||||||||  || | | ||||||| |||||||  |||||||||||| ||| ||||||||||| ||    
T  92564 cacgtcttgttgtggtgttcgtttggttcatattgaaagatcaattttagtaaatcacagattcaatcaatgatttggacgtcaacgttgtagatccaga 92465  T
Q  522 ag 523  Q
    ||    
T  92464 ag 92463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 32933 - 32714
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| |||| |||||||| |||||    
T  32933 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtc 32834  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||   |||||||||||||| |||| | ||| ||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  32833 ttgtgcggc---gtttgatttcgcgtcttgtcgcggtatttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 32737  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || ||| |||| ||||| |||||    
T  32736 cgtcaacgttgcagatctggaag 32714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 355 - 499
Target Start/End: Complemental strand, 1817 - 1669
Alignment:
Q  355 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc--gttttgttgtg--gtgtttatttggtta 450  Q
    |||| ||||||||||||||  |||||||||| |||||||| ||||||||| |||||||||||||||||||   ||||||||||  |||||  |||||||     
T  1817 tttcgtgatttcgtcgtcttagtgcgacgttctgttgttcgtcgtcttgtccggcgttgtttgatttcgcatcttttgttgtgtagtgttcgtttggttc 1718  T
Q  451 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 499  Q
     ||||||||||||| |||||  |||||||| |||||||  |||||||||    
T  1717 gtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgg 1669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 301 - 485
Target Start/End: Original strand, 1247 - 1428
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||| |||||||||||| ||| || ||||||||||| || |||||||||| ||||  ||||||| ||||||  ||||| ||||||||||||| |||||    
T  1247 ctttcactctaaataagtggttttcacatatatcaagttttctcttttgtgtttttttgtgatttcttcgtctaagtgcggcgttgtgttgttcgtcgtc 1346  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattc 485  Q
    ||||  |||   |||||||||||||| |||||| ||||||  ||| |||  |||||||||||| || ||| ||||| ||| ||||    
T  1347 ttgtgtggc---gtttgatttcgcgtcttgttgcggtgttcgtttagttcctattgaaagatcggcatcagtcaattacaaattc 1428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 301 - 523
Target Start/End: Original strand, 15395 - 15614
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| ||||| | |||||| ||| ||||||||| ||||  |||||||||| |||  |||||  |||||||||||| |||||    
T  15395 ctttcaatctaaataagtggttttcatatctttcaagtttttccttttgtgt-tttttgtgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtc 15493  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    |||| ||||||  ||||||||||||| |||| | ||||||| ||   ||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  15494 ttgtgcggcgt--tttgatttcgcgtcttgtcgcggtgtttgttcatttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 15591  T
Q  501 cgccaatgttgtagatccggaag 523  Q
    || |||  ||| |||||||||||    
T  15592 cgtcaacattgcagatccggaag 15614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 463
Target Start/End: Complemental strand, 10238 - 10069
Alignment:
Q  289 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtg 388  Q
    ||||||| ||| ||||| ||||||||||||| ||| || ||||||||||| ||| ||||||||  ||||  ||||||||||||||  ||||| | ||||     
T  10238 ttttttcgttttctttccatctaaataagtggttttcacatatatcaagtttttccttttgtg--tttttgtgatttcgtcgtctaagtgcggctttgtt 10141  T
Q  389 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||| ||||||||| ||||   |||||||||||||| |||| | |||||| ||||  ||  ||||||||||||    
T  10140 ttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgttcatttaattcctattgaaagatc 10069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 393
Target Start/End: Original strand, 37950 - 38040
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgtt 393  Q
    ||||||||||||||||||| ||| || |||| |||||| ||| ||||||||| ||||  | |||||||| |||  ||||| | ||||||||||    
T  37950 ctttcaatctaaataagtggttttcacatatgtcaagtttttccttttgtgtttttt--ttatttcgtcatctaagtgcggcattgtgttgtt 38040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 301 - 523
Target Start/End: Complemental strand, 72049 - 71831
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||| ||||||||| ||| || || |||||||| ||| | ||||||| ||||  ||||||||||||||  ||||| ||||||||||||| | |||    
T  72049 ctttcaatccaaataagtggttttcacatctatcaagtttttccatttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgttgtc 71951  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 500  Q
    ||||   |||  |||||||||| |||||||| | ||||||| ||  |||  ||||||||||||  | | | ||||| ||| ||||||   ||||||||||    
T  71950 ttgt---gcggagtttgatttcacgttttgtcgcggtgtttgttcagttcctattgaaagatctacattagtcaattacaaattcaaccaatgatttgga 71854  T
Q  501 cgccaatgttgtagatccggaag 523  Q
     | ||| ||||||||||||||||    
T  71853 tgtcaacgttgtagatccggaag 71831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 393
Target Start/End: Original strand, 50690 - 50781
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgtt 393  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||| ||||||||||||||  ||||| ||||||||||||    
T  50690 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgt-ttttcgtgatttcgtcgtctaagtgcggcgttgtgttgtt 50781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 383 - 462
Target Start/End: Complemental strand, 36762 - 36683
Alignment:
Q  383 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||||||||||| ||||||||| ||| |||||||||||||   | ||||||||||| |||||||||| ||||||||||||    
T  36762 gttgtgttgttcgtcgtcttgtgcggagttgtttgatttcttttcttgttgtggtgattatttggttcatattgaaagat 36683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 6311 - 6387
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||| |||||||||||||| |||||||||||| ||| || ||| |||||| ||||| || |||||||||||||    
T  6311 tgttgttcgtcgtcttgtacggcattgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatc 6387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 404
Target Start/End: Original strand, 7619 - 7722
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    |||||||| |||||||||| ||| || ||||||||||| ||| ||||||||| ||||  ||| || ||| |||| ||||| ||||||||||||  |||||    
T  7619 ctttcaatttaaataagtggttttcacatatatcaagtttttccttttgtgtttttttgtgaatttgtcatctgagtgcggcgttgtgttgtttgtcgtc 7718  T
Q  401 ttgt 404  Q
    ||||    
T  7719 ttgt 7722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 488
Target Start/End: Original strand, 9396 - 9474
Alignment:
Q  410 gttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 488  Q
    ||||||||||||  |||||| ||||||||||  |||||||| | ||||||||||| ||| | ||||| |||||||||||    
T  9396 gttgtttgattttccgttttattgtggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaat 9474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 301 - 463
Target Start/End: Complemental strand, 2156 - 2000
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 400  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||  ||||  ||||||| ||||||  ||||| | || |||||||| |||||    
T  2156 ctttcaatctaaataagtggttt-cacatctatcaagttttttcttttgtg--tttttgtgatttcatcgtctaagtgcggcattttgttgttcgtcgtc 2060  T
Q  401 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    || |  |||   |||||||||||| | |||| | ||||||| ||| |||  ||||||||||||    
T  2059 ttatgtggc---gtttgatttcgcatcttgtcgcggtgtttttttagttcctattgaaagatc 2000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 288 - 431
Target Start/End: Original strand, 8403 - 8542
Alignment:
Q  288 cttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgt 387  Q
    |||||||  ||| |||| || ||||||||||| |||  | ||||||| ||| ||| |||||||| |||||  |||||||||| |||  ||||| ||||||    
T  8403 ctttttttcttttcttttaagctaaataagtggtttttacatatatccagtttttgcttttgtg-atttttgtgatttcgtcatctaagtgcggcgttgt 8501  T
Q  388 gttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgt 431  Q
     |||||||||||||||| | ||   |||||||||||||| ||||    
T  8502 attgttcatcgtcttgtgcagc---gtttgatttcgcgtcttgt 8542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 462
Target Start/End: Original strand, 5404 - 5479
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 462  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || |||||||||| ||||  ||  |||||||||||    
T  5404 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttatttctattgaaagat 5479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 458
Target Start/End: Complemental strand, 201443 - 201372
Alignment:
Q  387 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 458  Q
    |||||||| | ||||||| ||||| ||||||||||| ||| || |||||||||| ||||| || ||||||||    
T  201443 tgttgttcgtagtcttgtgcggcgctgtttgatttcacgtcttcttgtggtgttcatttgattcatattgaa 201372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 2003 - 1932
Alignment:
Q  301 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctg 374  Q
    |||||||| |||||||||| ||| || ||||||||||| ||| ||||||||  ||||  |||||||||||||||    
T  2003 ctttcaatttaaataagtggtttgcacatatatcaagtttttccttttgtg--tttttgtgatttcgtcgtctg 1932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 463
Target Start/End: Original strand, 453936 - 454014
Alignment:
Q  385 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 463  Q
    |||||||||| ||||||||  ||||||||||||||||   || |||||| |||||| |||||  | |||||||||||||    
T  453936 tgtgttgttcgtcgtcttgggcggcgttgtttgattttcagtcttgttgcggtgttcatttgactcatattgaaagatc 454014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 465
Target Start/End: Complemental strand, 9717 - 9613
Alignment:
Q  360 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 459  Q
    ||||||||||||||   |||| ||||||  ||||  |||| |||| |||||||||||||| ||  | ||||||||||| || ||||| || |||||||||    
T  9717 tgatttcgtcgtctaaatgcgtcgttgttgtgtttgtcgt-ttgtgcggcgttgtttgatatcttgctttgttgtggtattcatttgattcatattgaaa 9619  T
Q  460 gatcag 465  Q
    ||||||    
T  9618 gatcag 9613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 470
Target Start/End: Complemental strand, 4133 - 4072
Alignment:
Q  409 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttca 470  Q
    ||||||||||||||| || || ||||||||||  |||| || ||||||||||| ||||||||    
T  4133 cgttgtttgatttcgtgtcttattgtggtgttcgtttgattcatattgaaagaccagcttca 4072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 19121 - 19053
Alignment:
Q  443 tttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttg 511  Q
    ||||||| |||||||||||| | ||||| ||||||||| | |||||  |||||||||| | ||||||||    
T  19121 tttggttcatattgaaagatgaacttcagtcaatcacagaatcaatcaatgatttggaggtcaatgttg 19053  T

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