View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18328_high_15 (Length: 384)
Name: NF18328_high_15
Description: NF18328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18328_high_15 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 366; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 7 - 384
Target Start/End: Complemental strand, 9973838 - 9973461
Alignment:
| Q |
7 |
tccaagaatatcaacattgtggaaagagtgaaaacgaccaagataatgttaatgagcattataagaattcaagataagataattgagtagtgcacaccaa |
106 |
Q |
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| T |
9973838 |
tccaataatatcaacattgtggaaagagtgaaaacgaccaagataatgttaatgagtattataagaattcaagataagataattgagtagagcacaccaa |
9973739 |
T |
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| Q |
107 |
gaagtatggccaaaaccaaaaatggtaacttgccagcacaagcattgctaataaatcttttatatttttgttctttctgtatctcagtatgatacattac |
206 |
Q |
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| T |
9973738 |
gaagtatggccaaaaccaaaaatggtaacttgccagcacaagcattgctaataaatcttttatatttttgttctttctgtatctcagtatgatacattac |
9973639 |
T |
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| Q |
207 |
ttctagtagatgttccaacatatatgatttcatcggcaactgcaaagactaatctttcgtgtcaaataggacaacaagggtagcaaagttcttcccctag |
306 |
Q |
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| T |
9973638 |
ttctagtagatgttccaacatatatgatttcatcggcaactgcaaagactaatctttcgtgtcaaataggacaacaagggtagcaaagttcttcccctag |
9973539 |
T |
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| Q |
307 |
agttggacattgttgcattcacaagaattggatttgaacagaaaccactagctaagctcaaaaatatttagaccatct |
384 |
Q |
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| T |
9973538 |
agttggacattgttgcattcacaagaattggatttgaacagaaaccactagctaagctcaaaaatatttagaccatct |
9973461 |
T |
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