View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18328_high_25 (Length: 289)

Name: NF18328_high_25
Description: NF18328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18328_high_25
NF18328_high_25
[»] chr8 (19 HSPs)
chr8 (23-274)||(22432246-22432497)
chr8 (27-274)||(29182530-29182777)
chr8 (23-274)||(27576676-27576933)
chr8 (24-243)||(774666-774886)
chr8 (24-229)||(1668030-1668224)
chr8 (24-229)||(16658745-16658939)
chr8 (23-132)||(18068488-18068597)
chr8 (122-229)||(38521226-38521333)
chr8 (24-147)||(780417-780540)
chr8 (122-243)||(6786449-6786570)
chr8 (32-229)||(43916025-43916220)
chr8 (30-229)||(22014764-22014954)
chr8 (174-243)||(780348-780417)
chr8 (124-227)||(11472357-11472467)
chr8 (130-227)||(42808687-42808784)
chr8 (130-222)||(33360397-33360489)
chr8 (24-71)||(38521370-38521417)
chr8 (24-71)||(6786362-6786409)
chr8 (122-166)||(34212961-34213005)
[»] chr7 (7 HSPs)
chr7 (23-274)||(9371720-9371971)
chr7 (23-243)||(6472230-6472450)
chr7 (23-243)||(35012960-35013181)
chr7 (83-274)||(21357977-21358168)
chr7 (124-229)||(44660323-44660428)
chr7 (130-193)||(31419280-31419343)
chr7 (103-166)||(12003038-12003099)
[»] chr4 (20 HSPs)
chr4 (23-274)||(21604339-21604590)
chr4 (23-274)||(46164321-46164572)
chr4 (23-243)||(47825822-47826041)
chr4 (23-243)||(8432966-8433186)
chr4 (24-225)||(54785192-54785393)
chr4 (96-229)||(21355857-21355986)
chr4 (96-229)||(13740252-13740381)
chr4 (96-229)||(23218220-23218349)
chr4 (122-229)||(45143984-45144091)
chr4 (122-229)||(45152753-45152860)
chr4 (135-227)||(38115466-38115562)
chr4 (130-227)||(14799999-14800096)
chr4 (122-220)||(33753972-33754070)
chr4 (169-227)||(3187588-3187646)
chr4 (30-71)||(13740399-13740440)
chr4 (30-71)||(21355789-21355830)
chr4 (24-71)||(23218367-23218414)
chr4 (24-69)||(45143897-45143942)
chr4 (24-69)||(45152666-45152711)
chr4 (213-243)||(54785145-54785175)
[»] chr1 (10 HSPs)
chr1 (23-274)||(29599206-29599457)
chr1 (23-269)||(324592-324838)
chr1 (23-274)||(48184152-48184397)
chr1 (24-243)||(26354919-26355139)
chr1 (30-219)||(16764537-16764717)
chr1 (147-243)||(26014504-26014600)
chr1 (30-219)||(6165049-6165229)
chr1 (30-219)||(10801568-10801749)
chr1 (32-226)||(17480990-17481171)
chr1 (27-90)||(26014443-26014506)
[»] chr3 (9 HSPs)
chr3 (23-274)||(9456327-9456578)
chr3 (96-229)||(21239425-21239554)
chr3 (96-229)||(52893421-52893550)
chr3 (96-227)||(2338818-2338943)
chr3 (130-225)||(40922976-40923071)
chr3 (130-225)||(2733793-2733888)
chr3 (24-71)||(2338961-2339008)
chr3 (24-71)||(52893356-52893403)
chr3 (103-166)||(4329855-4329916)
[»] chr5 (10 HSPs)
chr5 (23-243)||(10572616-10572836)
chr5 (23-274)||(32863561-32863808)
chr5 (23-229)||(3174077-3174283)
chr5 (92-229)||(19209112-19209245)
chr5 (92-229)||(23737868-23738001)
chr5 (124-226)||(43300188-43300290)
chr5 (124-222)||(41958605-41958703)
chr5 (130-225)||(22273148-22273243)
chr5 (179-229)||(18739403-18739453)
chr5 (104-154)||(18739449-18739499)
[»] chr2 (4 HSPs)
chr2 (27-243)||(25697553-25697769)
chr2 (24-229)||(3935372-3935566)
chr2 (24-220)||(38978382-38978567)
chr2 (170-220)||(32339602-32339652)
[»] chr6 (6 HSPs)
chr6 (24-243)||(32397146-32397366)
chr6 (36-202)||(9302935-9303096)
chr6 (130-225)||(7171047-7171142)
chr6 (23-62)||(16497344-16497383)
chr6 (103-166)||(32397747-32397808)
chr6 (122-166)||(14654645-14654689)
[»] scaffold0393 (2 HSPs)
scaffold0393 (102-229)||(11169-11292)
scaffold0393 (30-71)||(11313-11354)
[»] scaffold0054 (1 HSPs)
scaffold0054 (30-219)||(2792-2972)
[»] scaffold1160 (1 HSPs)
scaffold1160 (24-229)||(2392-2580)
[»] scaffold0285 (1 HSPs)
scaffold0285 (30-219)||(8383-8563)
[»] scaffold1084 (1 HSPs)
scaffold1084 (124-227)||(1217-1324)
[»] scaffold1300 (1 HSPs)
scaffold1300 (135-227)||(924-1020)
[»] scaffold0005 (1 HSPs)
scaffold0005 (130-227)||(39631-39728)


Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 23 - 274
Target Start/End: Complemental strand, 22432497 - 22432246
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22432497 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 22432398  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22432397 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 22432298  T
Q  223 ctttagtaatgtgaaattgaannnnnnnagttttcgattgctactgattact 274  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||    
T  22432297 ctttagtaatgtgaaattgaatttttttagttttcgattgctactgattact 22432246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 27 - 274
Target Start/End: Complemental strand, 29182777 - 29182530
Alignment:
Q  27 ggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatccat 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29182777 ggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatccat 29182678  T
Q  127 ctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttcttt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29182677 ctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttcttt 29182578  T
Q  227 agtaatgtgaaattgaannnnnnnagttttcgattgctactgattact 274  Q
    |||||||||||||||||       ||||||||||||||||||||||||    
T  29182577 agtaatgtgaaattgaatttttttagttttcgattgctactgattact 29182530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 23 - 274
Target Start/End: Original strand, 27576676 - 27576933
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27576676 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 27576775  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttca------attctgattctgatttgatgatta 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||    
T  27576776 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgattctgatttgatgatta 27576875  T
Q  217 catgttctttagtaatgtgaaattgaannnnnnnagttttcgattgctactgattact 274  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  27576876 catgttctttagtaatgtgaaattgaatttttttagttttcgattgctactgattact 27576933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 24 - 243
Target Start/End: Complemental strand, 774886 - 774666
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatc 123  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  774886 gccggcgaaccgcgaccactctcctccttctccatccatcaccgccgcatcctcctccatcttctgtattgattctttagtttagagagctatctccatc 774787  T
Q  124 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaa-ttgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    ||||  |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  774786 catccttctccacaaaccctaattgttgtaacttataaggtaatgtgaaatttgaatgtaatttccttcaattctgattctgatatgataattacatgtt 774687  T
Q  223 ctttagtaatgtgaaattgaa 243  Q
    |||||||| ||||||||||||    
T  774686 ctttagtactgtgaaattgaa 774666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 1668030 - 1668224
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatc 123  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||      | | || | || |  |  ||||| ||||||||||||||||||||      
T  1668030 gccggtgagccgcgaccactctcctccttctccatccatcaccgccgc------cgcgat-tactctcctccttcttcagtttagagagctatctcca-- 1668120  T
Q  124 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttc 223  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  1668121 --tctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattatgattatgatttgatgattacatgttc 1668218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 16658745 - 16658939
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatc 123  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||      | | || | || |  |  ||||| ||||||||||||||||||||      
T  16658745 gccggtgagccgcgaccactctcctccttctccatccatcaccgccgc------cgcgat-tactctcctccttcttcagtttagagagctatctcca-- 16658835  T
Q  124 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttc 223  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  16658836 --tctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattatgattatgatttgatgattacatgttc 16658933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 18068488 - 18068597
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  18068488 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcatcctcctcaatcttctgtattgattctttagtttagagagctatctccat 18068587  T
Q  123 ccatctctct 132  Q
    ||||||||||    
T  18068588 ccatctctct 18068597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 38521333 - 38521226
Alignment:
Q  122 tccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgt 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  38521333 tccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattatgattatgatttgatgattacatgt 38521234  T
Q  222 tctttagt 229  Q
    ||||||||    
T  38521233 tctttagt 38521226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 780540 - 780417
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatc 123  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  780540 gccggcgaaccgcgaccactctcctccttctccatccatcaccgccgcatcctcctccatcttctgtattgattctttagtttagagagctatctccatc 780441  T
Q  124 catctctctccacaaaccctaatt 147  Q
    ||||  ||||||||||||||||||    
T  780440 catccttctccacaaaccctaatt 780417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 6786449 - 6786570
Alignment:
Q  122 tccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaa-ttgaatgtaatttccttcaattctgattctgatttgatgattacatg 220  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||    
T  6786449 tccatctctctccacaaaccctaattgctgtaacttgtaaggtaatgtgaaatttgaatgtaacttccttcaattctgattttgatttgatgattacatg 6786548  T
Q  221 ttctttagtaatgtgaaattgaa 243  Q
    || ||||||||||||||||||||    
T  6786549 tt-tttagtaatgtgaaattgaa 6786570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 229
Target Start/End: Original strand, 43916025 - 43916220
Alignment:
Q  32 gccgcgaccactct--tctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatccatctc 129  Q
    ||||||||||||||  | |||||||||||||||||||| |||| || |||| || |||||| ||||||||| ||||||||||||||||||||    ||||    
T  43916025 gccgcgaccactctcatttccttctccatccatcaccgtcgcatcctcctctattttctgtgttgattcttcagtttagagagctatctcca----tctc 43916120  T
Q  130 tctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttctttagt 229  Q
    |||||| ||||||| |||||||||| |||||||| |||||||| || ||||||||||||||||| |||||||||  ||| | |||| |||||| ||||||    
T  43916121 tctccataaaccctgattgttgtaaattgtaaggaaatgtgaattttaatgtaatttccttcaaatctgattcttctttaacgattgcatgttatttagt 43916220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 30 - 229
Target Start/End: Original strand, 22014764 - 22014954
Alignment:
Q  30 gagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatccatctc 129  Q
    |||||||||||||||| |||||||||||||||||||||| |||  | |||| ||||||||| | |||| || ||||||||||            ||||||    
T  22014764 gagccgcgaccactctcctccttctccatccatcaccgctgcatactcctccatcttctgtttcgattattcagtttagaga------------catctc 22014851  T
Q  130 tctccacaa---accctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttcttt 226  Q
    |||||||||   |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |  |||||||||||||| ||||||    
T  22014852 tctccacaacaaaccctaattgttgtaacttgtaagttaatgtgaaattgaatgtaatttccttcaattatgattattgtttgatgattacatattcttt 22014951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 780417 - 780348
Alignment:
Q  174 ttgaatgtaatttccttcaattctgattctgatttgatgattacatgttctttagtaatgtgaaattgaa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  780417 ttgaatgtaatttccttcaattctgattctgatttgatgattacatgttctttagtaatgtgaaattgaa 780348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 11472467 - 11472357
Alignment:
Q  124 catctctctccaca---aaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattc----tgattctgatttgatgatta 216  Q
    ||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     |||||||||| |||||||||    
T  11472467 catctctctccacagaaaaccctaattgttgtaatttgtaaggtaatgtgaaattgaatgtaatttccttcaattaattatgattctgatatgatgatta 11472368  T
Q  217 catgttcttta 227  Q
    |||||||||||    
T  11472367 catgttcttta 11472357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 42808687 - 42808784
Alignment:
Q  130 tctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttcttta 227  Q
    |||||||||||||||||| |||||| ||| |||||||| |||||||||||||| |||||||||| | ||||| |  | ||||||||||||||||||||    
T  42808687 tctccacaaaccctaattcttgtaaattgcaaggtaatatgaaattgaatgtattttccttcaaatatgattattctctgatgattacatgttcttta 42808784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 33360397 - 33360489
Alignment:
Q  130 tctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    |||||||||||||||||| | |||| ||| ||| |||| |||||||||||||| |||||||||| | ||||| |  | |||||||||||||||    
T  33360397 tctccacaaaccctaattctggtaaattgcaagttaatatgaaattgaatgtattttccttcaaatatgattattctctgatgattacatgtt 33360489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 38521417 - 38521370
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgc 71  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  38521417 gccggtgagccgcgaccactcttctccttctccatccatcactgccgc 38521370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 6786362 - 6786409
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgc 71  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||||||    
T  6786362 gccgtcgaaccgcgaccactctcctccttctccatccatcaccgccgc 6786409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 34213005 - 34212961
Alignment:
Q  122 tccatctctctccacaaaccctaattgttgtaacttgtaaggtaa 166  Q
    ||||||||||||||||||||||| || |||||| |||||||||||    
T  34213005 tccatctctctccacaaaccctagttcttgtaaattgtaaggtaa 34212961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 23 - 274
Target Start/End: Original strand, 9371720 - 9371971
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9371720 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 9371819  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9371820 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 9371919  T
Q  223 ctttagtaatgtgaaattgaannnnnnnagttttcgattgctactgattact 274  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||    
T  9371920 ctttagtaatgtgaaattgaatttttttagttttcgattgctactgattact 9371971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 23 - 243
Target Start/End: Complemental strand, 6472450 - 6472230
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6472450 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 6472351  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6472350 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 6472251  T
Q  223 ctttagtaatgtgaaattgaa 243  Q
    |||||||||||||||||||||    
T  6472250 ctttagtaatgtgaaattgaa 6472230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 23 - 243
Target Start/End: Complemental strand, 35013181 - 35012960
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccc-tcaatcttctgtattgattctttagtttagagagctatctcca 121  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35013181 tgccggcgggccgcgaccactcttctccttctccatccatcaccgccgcaccccccctcaatcttctgtattgattctttagtttagagagctatctcca 35013082  T
Q  122 tccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgt 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  35013081 tccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaatcctgattctgatttgataattacatgt 35012982  T
Q  222 tctttagtaatgtgaaattgaa 243  Q
    |||| |||||||||||||||||    
T  35012981 tcttgagtaatgtgaaattgaa 35012960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 83 - 274
Target Start/End: Complemental strand, 21358168 - 21357977
Alignment:
Q  83 tcttctgtattgattctttagtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgta 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21358168 tcttctgtattgattctttagtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgta 21358069  T
Q  183 atttccttcaattctgattctgatttgatgattacatgttctttagtaatgtgaaattgaannnnnnnagttttcgattgctactgattact 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  21358068 atttccttcaattctgattctgatttgatgattacatgttctttagtaatgtgaaattgaatttttttagttttcgattgctactgattact 21357977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 229
Target Start/End: Original strand, 44660323 - 44660428
Alignment:
Q  124 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttc 223  Q
    |||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||||| |  ||| ||||||||||||||    
T  44660323 catctctctccataaaccctaattgttctaaattataaggtaatgtgaaattgaatgtaatttcgttcaattctgatttttctttaatgattacatgttc 44660422  T
Q  224 tttagt 229  Q
    ||||||    
T  44660423 tttagt 44660428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 31419280 - 31419343
Alignment:
Q  130 tctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaa 193  Q
    |||||||||||||||||| |||||| ||| ||||||||  ||||||||||||| ||||||||||    
T  31419280 tctccacaaaccctaattcttgtaaattgcaaggtaataagaaattgaatgtattttccttcaa 31419343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 12003099 - 12003038
Alignment:
Q  103 gtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaa 166  Q
    ||||| |||||||||||||||  ||||| |||||| ||||||||| |||||| |||||||||||    
T  12003099 gtttaaagagctatctccatc--tctctttccacacaccctaattcttgtaaattgtaaggtaa 12003038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 23 - 274
Target Start/End: Original strand, 21604339 - 21604590
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21604339 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 21604438  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21604439 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 21604538  T
Q  223 ctttagtaatgtgaaattgaannnnnnnagttttcgattgctactgattact 274  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||    
T  21604539 ctttagtaatgtgaaattgaatttttttagttttcgattgctactgattact 21604590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 23 - 274
Target Start/End: Complemental strand, 46164572 - 46164321
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  46164572 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctctatcttctatattgattctttagtttagagagctatctccat 46164473  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46164472 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 46164373  T
Q  223 ctttagtaatgtgaaattgaannnnnnnagttttcgattgctactgattact 274  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||    
T  46164372 ctttagtaatgtgaaattgaatttttttagttttcgattgctactgattact 46164321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 23 - 243
Target Start/End: Original strand, 47825822 - 47826041
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47825822 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccc-ctcaatcttctgtattgattctttagtttagagagctatctccat 47825920  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47825921 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 47826020  T
Q  223 ctttagtaatgtgaaattgaa 243  Q
    |||||||||||||||||||||    
T  47826021 ctttagtaatgtgaaattgaa 47826041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 23 - 243
Target Start/End: Complemental strand, 8433186 - 8432966
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8433186 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagaaagctatctccat 8433087  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8433086 ccatctctctccacaaaccctaattgttgttacttgtaaggtaatgtgaaattgaatgttatttccttcaattctgattctgatttgatgattacatgtt 8432987  T
Q  223 ctttagtaatgtgaaattgaa 243  Q
    |||||||||||||||||||||    
T  8432986 ctttagtaatgtgaaattgaa 8432966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 24 - 225
Target Start/End: Complemental strand, 54785393 - 54785192
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatc 123  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  54785393 gccggcgagccgcaaccactctcctccttctccatccatcaccgccgcatcctcctcgatcttctgtattgattctttagtttagggagctgtctccatc 54785294  T
Q  124 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttc 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  54785293 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattatgattctgatttgatgattacatgttc 54785194  T
Q  224 tt 225  Q
    ||    
T  54785193 tt 54785192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 96 - 229
Target Start/End: Original strand, 21355857 - 21355986
Alignment:
Q  96 ttctttagtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaatt 195  Q
    ||||| ||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21355857 ttcttcagtttagagagctatctcca----tctctctccacaaaccctaattgttgtaacttgtaaggtaacgtgaaattgaatgtaatttccttcaatt 21355952  T
Q  196 ctgattctgatttgatgattacatgttctttagt 229  Q
    ||||||||||||||||||||||||||||||||||    
T  21355953 ctgattctgatttgatgattacatgttctttagt 21355986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 96 - 229
Target Start/End: Complemental strand, 13740381 - 13740252
Alignment:
Q  96 ttctttagtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaatt 195  Q
    ||||| ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13740381 ttcttcagtttagagagctatctccatc----tctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaatt 13740286  T
Q  196 ctgattctgatttgatgattacatgttctttagt 229  Q
     ||||| |||||||||||||||||||||||||||    
T  13740285 atgattatgatttgatgattacatgttctttagt 13740252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 96 - 229
Target Start/End: Complemental strand, 23218349 - 23218220
Alignment:
Q  96 ttctttagtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaatt 195  Q
    ||||| ||||||||||| ||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23218349 ttcttcagtttagagagttatctccatc----tctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaatt 23218254  T
Q  196 ctgattctgatttgatgattacatgttctttagt 229  Q
     ||||| |||||||||||||||||||||||||||    
T  23218253 atgattatgatttgatgattacatgttctttagt 23218220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 45143984 - 45144091
Alignment:
Q  122 tccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgt 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  45143984 tccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattatgattatgatttgatgattacatgt 45144083  T
Q  222 tctttagt 229  Q
    ||||||||    
T  45144084 tctttagt 45144091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 45152753 - 45152860
Alignment:
Q  122 tccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgt 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  45152753 tccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattatgattatgatttgatgattacatgt 45152852  T
Q  222 tctttagt 229  Q
    ||||||||    
T  45152853 tctttagt 45152860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 38115466 - 38115562
Alignment:
Q  135 acaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattc----tgattctgatttgatgattacatgttcttta 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     |||||||||| ||||||||||||||| ||||    
T  38115466 acaaaccctaattgttgtaatttgtaaggtaatgtgaaattgaatgtaatttccttcaattaattatgattctgatatgatgattacatgtttttta 38115562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 14800096 - 14799999
Alignment:
Q  130 tctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttcttta 227  Q
    |||||||||||||||||| |||||| ||  |||||||| ||||||| |||||| |||||||||| | ||||| |  | |||||||||| |||||||||    
T  14800096 tctccacaaaccctaatttttgtaaatttcaaggtaatatgaaattaaatgtattttccttcaaatatgattattctctgatgattacgtgttcttta 14799999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 33754070 - 33753972
Alignment:
Q  122 tccatctctctccacaaaccctaattgttgtaacttgtaaggt-aatgtgaaat--tgaatgtaatttccttcaattctgattctgatttgatgattaca 218  Q
    ||||||||| |||||||||||||||||||||||   |||| || ||  ||||||  |||||||||||| |||||||| ||||| ||||||||||||||||    
T  33754070 tccatctctttccacaaaccctaattgttgtaa---gtaatgtgaaattgaaatattgaatgtaattttcttcaattatgattttgatttgatgattaca 33753974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 3187646 - 3187588
Alignment:
Q  169 tgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttcttta 227  Q
    |||||||||||||| ||||||| || |||||||||  ||||||||||||||||||||||    
T  3187646 tgaaattgaatgtattttcctttaaatctgattcttctttgatgattacatgttcttta 3187588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 13740440 - 13740399
Alignment:
Q  30 gagccgcgaccactcttctccttctccatccatcaccgccgc 71  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  13740440 gagccgcgaccactctcctccttctccatccatcaccgccgc 13740399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 21355789 - 21355830
Alignment:
Q  30 gagccgcgaccactcttctccttctccatccatcaccgccgc 71  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  21355789 gagccgcgaccactctcctccttctccatccatcaccgccgc 21355830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 23218414 - 23218367
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgc 71  Q
    ||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  23218414 gccggtgagccgcgaccactctcctccttctccatccatcactgccgc 23218367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 45143897 - 45143942
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgcc 69  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||    
T  45143897 gccggtgagccgcgatcactctcctccttctccatccatcaccgcc 45143942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 45152666 - 45152711
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgcc 69  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||    
T  45152666 gccggtgagccgcgatcactctcctccttctccatccatcaccgcc 45152711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 243
Target Start/End: Complemental strand, 54785175 - 54785145
Alignment:
Q  213 attacatgttctttagtaatgtgaaattgaa 243  Q
    |||||||||||||||||||||||||||||||    
T  54785175 attacatgttctttagtaatgtgaaattgaa 54785145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 23 - 274
Target Start/End: Complemental strand, 29599457 - 29599206
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29599457 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 29599358  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29599357 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 29599258  T
Q  223 ctttagtaatgtgaaattgaannnnnnnagttttcgattgctactgattact 274  Q
    |||||||||||||||||||||       ||||||||||||| ||||||||||    
T  29599257 ctttagtaatgtgaaattgaatttttttagttttcgattgccactgattact 29599206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 23 - 269
Target Start/End: Original strand, 324592 - 324838
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  324592 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 324691  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  324692 ccatctctctccacaagccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattagatgtt 324791  T
Q  223 ctttagtaatgtgaaattgaannnnnnnagttttcgattgctactga 269  Q
    |||||||||||||||||||||       |||||||||||||||||||    
T  324792 ctttagtaatgtgaaattgaatttttttagttttcgattgctactga 324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 23 - 274
Target Start/End: Original strand, 48184152 - 48184397
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48184152 tgccggcaagccgcgaccactcttcttcttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 48184251  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||    
T  48184252 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttca------attctgatttgatgattacatgtt 48184345  T
Q  223 ctttagtaatgtgaaattgaannnnnnnagttttcgattgctactgattact 274  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||    
T  48184346 ctttagtaatgtgaaattgaatttttttagttttcgattgctactgattact 48184397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 24 - 243
Target Start/End: Original strand, 26354919 - 26355139
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatc 123  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| || |||| |||||||||||||||||| ||||| |||||||||||||||||    
T  26354919 gccggcgaaccgcgaccactctcctccttctccatccatcaccgccgcatcctcctccatcttctgtattgattctatagttcagagagctatctccatc 26355018  T
Q  124 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaa-ttgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26355019 catccttctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaatttgaatgtaacttccttcaattctgattctgatttgatgattacatgtt 26355118  T
Q  223 ctttagtaatgtgaaattgaa 243  Q
    |||||||||||||||||||||    
T  26355119 ctttagtaatgtgaaattgaa 26355139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 16764717 - 16764537
Alignment:
Q  30 gagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatccatctc 129  Q
    |||||||||||||||| |||||||||||||||||||| | |||  | |||| ||||||||| ||||||||||||||||||||            ||||||    
T  16764717 gagccgcgaccactctcctccttctccatccatcaccactgcatactcctccatcttctgttttgattctttagtttagaga------------catctc 16764630  T
Q  130 tctccacaa---accctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacat 219  Q
    |||||||||   |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  16764629 tctccacaacaaaccctaattgttgtaacttgtaagttaatgtgaaattgaatgtaattgtcttcaattctgattctgatttgatgattacat 16764537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 26014504 - 26014600
Alignment:
Q  147 tgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttctttagtaatgtgaaattgaa 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26014504 tgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttatttagtaatgtgaaattgaa 26014600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 6165229 - 6165049
Alignment:
Q  30 gagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatccatctc 129  Q
    |||||||||||||||| |||||||||||||||||||||| |||  | |||| ||||||||| | ||||||| ||||||||||            ||||||    
T  6165229 gagccgcgaccactctcctccttctccatccatcaccgctgcatactcctccatcttctgtttcgattcttcagtttagaga------------catctc 6165142  T
Q  130 tctccacaa---accctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacat 219  Q
    |||||||||   |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  6165141 tctccacaacaaaccctaattgttgtaacttgtaagttaatgtgaaattgaatgtaattgtcttcaattctgattctgatttgatgattacat 6165049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 10801749 - 10801568
Alignment:
Q  30 gagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatccatctc 129  Q
    |||||||||||||||| |||||||||||||||||||||| |||  |  ||| ||||||||| | ||||||| ||||||||||            ||||||    
T  10801749 gagccgcgaccactctcctccttctccatccatcaccgctgcatacttctccatcttctgtttcgattcttcagtttagaga------------catctc 10801662  T
Q  130 tctccacaa----accctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacat 219  Q
    |||||||||    |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  10801661 tctccacaacaaaaccctaattgttgtaacttgtaagttaatgtgaaattgaatgtaattgtcttcaattctgattctgatttgatgattacat 10801568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 226
Target Start/End: Complemental strand, 17481171 - 17480990
Alignment:
Q  32 gccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatccatctctc 131  Q
    |||| ||||||||  |||||||||||||||||||||  ||| || |||| ||||||||| |||         |||| |||||||||||||||    ||||    
T  17481171 gccgtgaccactcacctccttctccatccatcaccggtgcatcctcctccatcttctgtgttg---------tttaaagagctatctccatc----tctc 17481085  T
Q  132 tccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttcttt 226  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||||||| |||||||||| | ||||| |  |||||||||||||||||||||    
T  17481084 tccacaaatcctaattcttgtaaattgtaaggtaatgtgaaattgaatgtattttccttcaaatatgattattctttgatgattacatgttcttt 17480990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 26014443 - 26014506
Alignment:
Q  27 ggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgt 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26014443 ggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgt 26014506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 23 - 274
Target Start/End: Original strand, 9456327 - 9456578
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9456327 tgccggcgagctgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagacagctatctccat 9456426  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9456427 ccatctctctccacaaaccctaattgttgtaacttgaaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 9456526  T
Q  223 ctttagtaatgtgaaattgaannnnnnnagttttcgattgctactgattact 274  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||    
T  9456527 ctttagtaatgtgaaattgaatttttttagttttcgattgctactgattact 9456578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 96 - 229
Target Start/End: Original strand, 21239425 - 21239554
Alignment:
Q  96 ttctttagtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaatt 195  Q
    ||||| |||||||| |||||||||| ||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21239425 ttcttcagtttagaaagctatctccgtc----tctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaatt 21239520  T
Q  196 ctgattctgatttgatgattacatgttctttagt 229  Q
    |||||| |||||||||||||||||||||||||||    
T  21239521 ctgattatgatttgatgattacatgttctttagt 21239554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 96 - 229
Target Start/End: Original strand, 52893421 - 52893550
Alignment:
Q  96 ttctttagtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaatt 195  Q
    ||||| |||||||| |||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52893421 ttcttcagtttagaaagctatctcca----tctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaatt 52893516  T
Q  196 ctgattctgatttgatgattacatgttctttagt 229  Q
     ||||| |||||||||||||||||||||||||||    
T  52893517 atgattatgatttgatgattacatgttctttagt 52893550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 96 - 227
Target Start/End: Complemental strand, 2338943 - 2338818
Alignment:
Q  96 ttctttagtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaatt 195  Q
    ||||| ||||||||||| ||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2338943 ttcttcagtttagagagttatctccatc----tctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaatt 2338848  T
Q  196 ctgattctgatttgatgattacatgttcttta 227  Q
     ||||| |||||||   |||||||||||||||    
T  2338847 atgattatgatttg--tattacatgttcttta 2338818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 40922976 - 40923071
Alignment:
Q  130 tctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttctt 225  Q
    |||||||||||||||||| |||||| ||| ||||||||  ||||||||||||| |||||||||| | ||||| |  | ||||||||||||||||||    
T  40922976 tctccacaaaccctaattcttgtaaattgcaaggtaataagaaattgaatgtattttccttcaaatatgattattctctgatgattacatgttctt 40923071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 2733793 - 2733888
Alignment:
Q  130 tctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttctt 225  Q
    |||||||||||||||||| |||||| ||| ||||||||  |||||||||| || |||||||||| | ||||| |  | ||||||||||||||||||    
T  2733793 tctccacaaaccctaattcttgtaaattgcaaggtaataagaaattgaatctattttccttcaaatatgattattctctgatgattacatgttctt 2733888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 2339008 - 2338961
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgc 71  Q
    ||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  2339008 gccggtgagccgcgaccactctcctccttctccatccatcactgccgc 2338961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 52893356 - 52893403
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgc 71  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  52893356 gccggtgagccgcgatcactctcctccttctccatccatcaccgccgc 52893403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 4329916 - 4329855
Alignment:
Q  103 gtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaa 166  Q
    ||||| |||||||||||||||  ||||||||||||||||||| || | |||| |||||||||||    
T  4329916 gtttaaagagctatctccatc--tctctctccacaaaccctagttctagtaaattgtaaggtaa 4329855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 23 - 243
Target Start/End: Original strand, 10572616 - 10572836
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572616 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 10572715  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10572716 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattgtgattctgatttgatgattacatgtt 10572815  T
Q  223 ctttagtaatgtgaaattgaa 243  Q
    |||||||||||||||||||||    
T  10572816 ctttagtaatgtgaaattgaa 10572836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 23 - 274
Target Start/End: Original strand, 32863561 - 32863808
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32863561 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 32863660  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    |||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32863661 ccatctc----cacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 32863756  T
Q  223 ctttagtaatgtgaaattgaannnnnnnagttttcgattgctactgattact 274  Q
    |||||||| ||||||||||||       ||||||||||||||||||||||||    
T  32863757 ctttagtattgtgaaattgaatttttttagttttcgattgctactgattact 32863808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 23 - 229
Target Start/End: Original strand, 3174077 - 3174283
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3174077 tgccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccat 3174176  T
Q  123 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  3174177 ccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattatgattatgatttgatgattacatgtt 3174276  T
Q  223 ctttagt 229  Q
    |||||||    
T  3174277 ctttagt 3174283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 92 - 229
Target Start/End: Complemental strand, 19209245 - 19209112
Alignment:
Q  92 ttgattctttagtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttc 191  Q
    ||||||||| |||||| |||||||||| ||||    |||||||| |||||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  19209245 ttgattcttcagtttaaagagctatctgcatc----tctctccataaaccctaattgttgtaaatcgtaaggtaacgtgaaattgaatgtaatttccttc 19209150  T
Q  192 aattctgattctgatttgatgattacatgttctttagt 229  Q
    || |||||||||| ||| ||||||||||||||||||||    
T  19209149 aaatctgattctgctttaatgattacatgttctttagt 19209112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 92 - 229
Target Start/End: Original strand, 23737868 - 23738001
Alignment:
Q  92 ttgattctttagtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttc 191  Q
    ||||||||| |||||| |||||||||| ||||    |||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  23737868 ttgattcttcagtttaaagagctatctgcatc----tctctccataaaccctaattgttgtaaattgtaaggtaacatgaaattgaatgtaatttccttc 23737963  T
Q  192 aattctgattctgatttgatgattacatgttctttagt 229  Q
    || |||||||||  ||| ||||||||||||||||||||    
T  23737964 aaatctgattcttctttaatgattacatgttctttagt 23738001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 43300188 - 43300290
Alignment:
Q  124 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttc 223  Q
    |||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| |  ||| ||||||||||||||    
T  43300188 catctctctccataaaccctaattgttgtaaattataaggtaatgtgaaattgaatgtaatttcgttcaattctgatttttctttaatgattacatgttc 43300287  T
Q  224 ttt 226  Q
    |||    
T  43300288 ttt 43300290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 41958703 - 41958605
Alignment:
Q  124 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    |||||||||||| |||||||||||||||| | ||  |||||||||||||||||||||||||||| ||||||||||||| |  ||| |||||||||||||    
T  41958703 catctctctccataaaccctaattgttgttaattacaaggtaatgtgaaattgaatgtaatttcgttcaattctgatttttctttaatgattacatgtt 41958605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 22273243 - 22273148
Alignment:
Q  130 tctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttctt 225  Q
    |||||||||||||||||| |||||| ||| ||||||||  |||||||||| || |||||||||| | ||||| |  | ||||||||||||||||||    
T  22273243 tctccacaaaccctaattcttgtaaattgcaaggtaataagaaattgaatctattttccttcaaatatgattattctctgatgattacatgttctt 22273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 18739453 - 18739403
Alignment:
Q  179 tgtaatttccttcaattctgattctgatttgatgattacatgttctttagt 229  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  18739453 tgtaatttccttcaattatgattctgatttgatgattacatgttatttagt 18739403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 18739499 - 18739449
Alignment:
Q  104 tttagagagctatctccatccatctctctccacaaaccctaattgttgtaa 154  Q
    ||||||||||| ||| | | |||||||||||||||||||||||| ||||||    
T  18739499 tttagagagctttcttccttcatctctctccacaaaccctaattattgtaa 18739449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 27 - 243
Target Start/End: Complemental strand, 25697769 - 25697553
Alignment:
Q  27 ggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatccat 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25697769 ggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtatagattctttagtttagagagctatctccatccat 25697670  T
Q  127 ctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttcttt 226  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25697669 ctctctccacaaaccctaattgttgttacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttcttt 25697570  T
Q  227 agtaatgtgaaattgaa 243  Q
    |||||||||||||||||    
T  25697569 agtaatgtgaaattgaa 25697553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 3935566 - 3935372
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatc 123  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||      | | || | || |  |  ||||| ||||||||||||||||||||||    
T  3935566 gccggtgagccgcgaccactctcctccttctccatccatcaccgccgc------cgcgat-tactctcctacttcttcagtttagagagctatctccatc 3935474  T
Q  124 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttc 223  Q
        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  3935473 ----tctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattatgattataatttgatgattacatgttc 3935378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 38978567 - 38978382
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatc 123  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||||      | |||| | || |  |  ||||| |||||||| |||||||||||||    
T  38978567 gccggtgagccgcgatcactctcctccttctccatccatcaccgccgc------cgcaat-tactctcctccttcttcagtttagaaagctatctccatc 38978475  T
Q  124 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatg 220  Q
        |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  38978474 ----tctctccacaaaccctaattgttgtaacttgtaaggtagtgtgaaattgaatgtaatttccttcaattatgattatgatttgatgattacatg 38978382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 32339602 - 32339652
Alignment:
Q  170 gaaattgaatgtaatttccttcaattctgattctgatttgatgattacatg 220  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  32339602 gaaattgaatgtaattttcttcaattatgattctgatttgatgattacatg 32339652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 3e-88; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 24 - 243
Target Start/End: Original strand, 32397146 - 32397366
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatc 123  Q
    |||||||| || |||||||||| ||||| |||||||||||||||||||| || |||| |||||||  |||||||||||||||||||||||||||||||||    
T  32397146 gccggcgatccccgaccactctcctcctgctccatccatcaccgccgcatcctcctccatcttcttaattgattctttagtttagagagctatctccatc 32397245  T
Q  124 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaa-ttgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 222  Q
    ||||  |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32397246 catccttctccacaaaccctaattgttgtaacttataaggtaatgtgaaatttgaatgtaatttccttcaattctgattctgatttgatgattacatgtt 32397345  T
Q  223 ctttagtaatgtgaaattgaa 243  Q
    |||||||||||||||||||||    
T  32397346 ctttagtaatgtgaaattgaa 32397366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 202
Target Start/End: Original strand, 9302935 - 9303096
Alignment:
Q  36 cgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatccatctctctcca 135  Q
    |||||||||| |||||||||||||||||||||| ||| ||  ||| ||||||| ||||||||||  |||| |||||| ||||    ||||||||||||||    
T  9302935 cgaccactctcctccttctccatccatcaccgctgcatcctactccatcttctatattgattctccagttcagagagttatc----tccatctctctcca 9303030  T
Q  136 caaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattc 202  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  9303031 caaaccctaattgtt-aaacttgaaaggtaatgtgaaattgaatgtaatttccttcaattttgattc 9303096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 7171047 - 7171142
Alignment:
Q  130 tctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttctt 225  Q
    |||||||||||||||||| |||||| ||| ||||||||  |||||||||| || |||||||||| | ||||| |  | ||||||||||||||||||    
T  7171047 tctccacaaaccctaattcttgtaaattgcaaggtaataagaaattgaatctattttccttcaaatatgattattctctgatgattacatgttctt 7171142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 16497383 - 16497344
Alignment:
Q  23 tgccggcgagccgcgaccactcttctccttctccatccat 62  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16497383 tgccggcgagccgcgaccactcttctccttctccatccat 16497344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 32397747 - 32397808
Alignment:
Q  103 gtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaa 166  Q
    ||||| |||||||||||||||  ||||||||||||||||||| || |||||| |||||||||||    
T  32397747 gtttaaagagctatctccatc--tctctctccacaaaccctagttcttgtaaattgtaaggtaa 32397808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 14654689 - 14654645
Alignment:
Q  122 tccatctctctccacaaaccctaattgttgtaacttgtaaggtaa 166  Q
    ||||||||||||||||||||||| || |||||| |||||||||||    
T  14654689 tccatctctctccacaaaccctagttcttgtaaattgtaaggtaa 14654645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 11292 - 11169
Alignment:
Q  102 agtttagagagctatctccatccatctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgatt 201  Q
    ||||||||||||||||||||||    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11292 agtttagagagctatctccatc----tctctccacaaatcctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattatgatt 11197  T
Q  202 ctgatttgatgattacatgttctttagt 229  Q
     |||||||||||||||||||||||||||    
T  11196 atgatttgatgattacatgttctttagt 11169  T

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Target: scaffold0393; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 11354 - 11313
Alignment:
Q  30 gagccgcgaccactcttctccttctccatccatcaccgccgc 71  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  11354 gagccgcgaccactttcctccttctccatccatcaccgccgc 11313  T

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Target: scaffold0054 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 2792 - 2972
Alignment:
Q  30 gagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatccatctc 129  Q
    |||||||||||||||| |||||||||||||||||||||| |||  | |||| ||||||||| | ||||||| ||||||||||            ||||||    
T  2792 gagccgcgaccactctcctccttctccatccatcaccgctgcatactcctccatcttctgtttcgattcttcagtttagaga------------catctc 2879  T
Q  130 tctccacaa---accctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacat 219  Q
    |||||||||   |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  2880 tctccacaacaaaccctaattgttgtaacttgtaagttaatgtgaaattgaatgtaattgtcttcaattctgattctgatttgatgattacat 2972  T

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Target: scaffold1160 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 2392 - 2580
Alignment:
Q  24 gccggcgagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatc 123  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||      | | || | || |  |  ||||| ||||||||||||||||||||      
T  2392 gccggtgagccgcgaccactctcctccttctccatccatcaccgccgc------cgcgat-tactctcctccttcttcagtttagagagctatctcca-- 2482  T
Q  124 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttc 223  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||||||||||    
T  2483 --tctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttca------attatgatttgatgattacatgttc 2574  T

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Target: scaffold0285 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 8563 - 8383
Alignment:
Q  30 gagccgcgaccactcttctccttctccatccatcaccgccgcacccccctcaatcttctgtattgattctttagtttagagagctatctccatccatctc 129  Q
    |||||||||||||||| ||||||||||||||||||| || |||  | |||| ||||||||| | ||||||| ||||||||||            ||||||    
T  8563 gagccgcgaccactctcctccttctccatccatcactgctgcatactcctccatcttctgtttcgattcttcagtttagaga------------catctc 8476  T
Q  130 tctccacaa---accctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacat 219  Q
    |||||||||   |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  8475 tctccacaacaaaccctaattgttgtaacttgtaagttaatgtgaaattgaatgtaattgtcttcaattctgattctgatttgatgattacat 8383  T

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Target: scaffold1084 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1084
Description:

Target: scaffold1084; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 1217 - 1324
Alignment:
Q  124 catctctctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattc----tgattctgatttgatgattacat 219  Q
    |||||||| | |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||     |||||||||| ||||||||||||    
T  1217 catctctcacaacaaacactaattgttgtaatttgtaaggtaatgtgaaattgaatgtaatttccttcaattaattatgattctgatatgatgattacat 1316  T
Q  220 gttcttta 227  Q
    ||| ||||    
T  1317 gtttttta 1324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 1020 - 924
Alignment:
Q  135 acaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttcct----tcaattctgattctgatttgatgattacatgttcttta 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    | |||| |||||||||| ||||||||| ||||||||||    
T  1020 acaaaccctaattgttgtaatttgtaaggtaatgtgaaattgaatgtaatttcctttaattaattatgattctgatatgatgattatatgttcttta 924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 39631 - 39728
Alignment:
Q  130 tctccacaaaccctaattgttgtaacttgtaaggtaatgtgaaattgaatgtaatttccttcaattctgattctgatttgatgattacatgttcttta 227  Q
    |||||||||||||||||| |||||| ||  |||||||| ||||||| |||||| |||||||||| | ||||| |  | |||||||||| |||||||||    
T  39631 tctccacaaaccctaatttttgtaaatttcaaggtaatatgaaattaaatgtattttccttcaaatatgattattctctgatgattacgtgttcttta 39728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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