View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18328_high_32 (Length: 251)
Name: NF18328_high_32
Description: NF18328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18328_high_32 |
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Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 21 - 236
Target Start/End: Complemental strand, 34700963 - 34700750
Alignment:
| Q |
21 |
aacggtagctaattaacggttaaagggtttattagccctaaagagtggcataggtttgagctcaaccgcctggtgtgcgattcttaaacctcaagttcac |
120 |
Q |
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| T |
34700963 |
aacggtagctaattaacggttaaagggtttattagccctaaagagtggcataggtttgagctcaaccgcctggtgtgcgattcttaaacctcaagttcac |
34700864 |
T |
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| Q |
121 |
atcaccttgtttaccggacattgttttctatgcatcttatatataagccctcgtagttttgtcatttatgaaagacgtttgagtgtatattattttgaaa |
220 |
Q |
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||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
34700863 |
atcacctcgtttaccggacattgttttctatgcatctta--tataagccctcgtagttttgtcatttgtgaaagacgtttgagtgtatattattttgaaa |
34700766 |
T |
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| Q |
221 |
acattcttaatatttt |
236 |
Q |
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|||||||||| ||||| |
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| T |
34700765 |
acattcttaacatttt |
34700750 |
T |
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