View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18329_low_15 (Length: 285)
Name: NF18329_low_15
Description: NF18329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18329_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 7 - 271
Target Start/End: Complemental strand, 361664 - 361400
Alignment:
| Q |
7 |
acatcatcactggtaacaaatcgagaacatgagttaaggatgtaatcacgtgtgtcggtagggtacactaacatatggacactagtaataatgttagaaa |
106 |
Q |
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| T |
361664 |
acatcaccactggtaacaaatcgagaacatgagttaaggatgtaatcacgtgtatcggtatggtacactaacatatggacacttgtaataatgttaaaaa |
361565 |
T |
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| Q |
107 |
tttattgaatataatcacatgtgtatatagttgtcgtattagtgtcggagaccataatgaagtgtatatgttccaactaattagctacctaacaatttag |
206 |
Q |
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| T |
361564 |
tttattgaatataatcacatgtgtatatagttgtcgtattagtgttggagaccatgatgaagtgtatatgtttcaactaattagctacctaacaatttag |
361465 |
T |
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| Q |
207 |
cattgacacatcacaaatcatattgaagatatgtctagtgttcgaaaataatgacacgaaatttt |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
361464 |
cattgacacatcacaaatcatattgaagatatgtctagtgttggaaaataatgacacgaaatttt |
361400 |
T |
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