View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18329_low_30 (Length: 207)
Name: NF18329_low_30
Description: NF18329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18329_low_30 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 189; Significance: 1e-103; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-103
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 6414613 - 6414813
Alignment:
| Q |
7 |
aaaacaaatatatttgtacaattgaaagattggaaccattttcaaatttgttttattataatttttactccatatgtaacgggttaaaacataggaaaac |
106 |
Q |
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| T |
6414613 |
aaaacaaatatatttgtacaattgaaagtttgggaccattttcaaatttgttttattatattttttactccatatgtaacgggttaaaacataggaaaac |
6414712 |
T |
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| Q |
107 |
ccaataaatctgcacataacttgacttcttaataacgtacaatatctcttgtttattctcaaaaggaagcatcctctatacatacatatatatttctcaa |
206 |
Q |
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| T |
6414713 |
ccaataaatctgcacataacttgacttcttaataacgtacaatatctcttgtttattctcaaaaggaagcatcctctatacatacatatatatttctcaa |
6414812 |
T |
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| Q |
207 |
a |
207 |
Q |
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| T |
6414813 |
a |
6414813 |
T |
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