View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18329_low_7 (Length: 350)

Name: NF18329_low_7
Description: NF18329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18329_low_7
NF18329_low_7
[»] chr3 (43 HSPs)
chr3 (151-313)||(9818546-9818708)
chr3 (155-313)||(49293764-49293922)
chr3 (161-303)||(37832539-37832681)
chr3 (164-313)||(40064248-40064397)
chr3 (157-276)||(53645332-53645451)
chr3 (155-329)||(27261368-27261530)
chr3 (158-313)||(29690596-29690750)
chr3 (158-323)||(19386863-19387027)
chr3 (225-312)||(47467394-47467481)
chr3 (193-291)||(8598658-8598756)
chr3 (158-312)||(30238477-30238633)
chr3 (193-291)||(49296115-49296213)
chr3 (192-321)||(16155162-16155292)
chr3 (193-291)||(53835961-53836059)
chr3 (153-280)||(7665550-7665677)
chr3 (194-322)||(4962703-4962832)
chr3 (194-291)||(22489488-22489585)
chr3 (194-317)||(20833344-20833468)
chr3 (193-285)||(21386494-21386586)
chr3 (215-321)||(33693277-33693384)
chr3 (158-311)||(2118430-2118573)
chr3 (195-319)||(7437546-7437671)
chr3 (194-317)||(50902938-50903062)
chr3 (193-280)||(25049870-25049957)
chr3 (158-232)||(9031981-9032055)
chr3 (198-280)||(52617639-52617721)
chr3 (193-291)||(52810804-52810902)
chr3 (194-279)||(17946675-17946760)
chr3 (194-291)||(51737343-51737440)
chr3 (194-321)||(49458358-49458486)
chr3 (194-312)||(26107776-26107895)
chr3 (193-291)||(23753045-23753143)
chr3 (193-291)||(37455293-37455391)
chr3 (198-280)||(39038541-39038623)
chr3 (193-291)||(48379596-48379694)
chr3 (193-291)||(50761756-50761854)
chr3 (195-291)||(18750091-18750187)
chr3 (167-259)||(27994807-27994899)
chr3 (193-291)||(31645917-31646015)
chr3 (216-291)||(36673808-36673883)
chr3 (194-277)||(43172927-43173010)
chr3 (193-291)||(40897577-40897675)
chr3 (193-279)||(54629297-54629383)
[»] chr1 (46 HSPs)
chr1 (155-329)||(7798482-7798658)
chr1 (156-321)||(1108335-1108500)
chr1 (153-313)||(34019099-34019259)
chr1 (153-313)||(34751553-34751713)
chr1 (201-313)||(33886841-33886953)
chr1 (201-313)||(33957297-33957409)
chr1 (155-329)||(18954447-18954613)
chr1 (193-291)||(4005087-4005185)
chr1 (196-291)||(1243309-1243404)
chr1 (193-291)||(9192044-9192142)
chr1 (193-291)||(41353441-41353539)
chr1 (193-291)||(51106912-51107010)
chr1 (193-291)||(8147337-8147435)
chr1 (193-291)||(26757635-26757733)
chr1 (194-291)||(11579103-11579200)
chr1 (194-321)||(47371547-47371675)
chr1 (193-291)||(5494751-5494849)
chr1 (198-291)||(5209371-5209464)
chr1 (194-291)||(45273015-45273112)
chr1 (166-218)||(29027978-29028030)
chr1 (208-323)||(42304470-42304586)
chr1 (193-291)||(3583559-3583657)
chr1 (195-323)||(32760069-32760198)
chr1 (193-317)||(46328433-46328558)
chr1 (195-322)||(48966462-48966590)
chr1 (195-291)||(48177095-48177192)
chr1 (159-279)||(21248490-21248610)
chr1 (193-280)||(49971609-49971697)
chr1 (193-280)||(49231454-49231541)
chr1 (194-285)||(49236975-49237066)
chr1 (193-291)||(15834687-15834785)
chr1 (198-280)||(27257872-27257954)
chr1 (194-291)||(6313024-6313121)
chr1 (225-290)||(15927351-15927416)
chr1 (194-291)||(25612540-25612637)
chr1 (195-323)||(28403916-28404045)
chr1 (194-291)||(29396087-29396184)
chr1 (198-291)||(35177213-35177306)
chr1 (192-286)||(3593265-3593359)
chr1 (193-290)||(25253513-25253610)
chr1 (193-317)||(38535772-38535897)
chr1 (193-317)||(38557990-38558115)
chr1 (165-267)||(40706173-40706274)
chr1 (194-291)||(8140886-8140983)
chr1 (239-312)||(42638016-42638088)
chr1 (196-291)||(49453063-49453159)
[»] chr6 (24 HSPs)
chr6 (158-329)||(8779546-8779717)
chr6 (163-313)||(31996229-31996379)
chr6 (154-313)||(7835354-7835504)
chr6 (153-313)||(21199513-21199673)
chr6 (160-323)||(12028941-12029105)
chr6 (193-291)||(1463674-1463772)
chr6 (193-291)||(6788099-6788197)
chr6 (193-285)||(10113789-10113881)
chr6 (158-312)||(21010859-21011013)
chr6 (195-280)||(13461374-13461459)
chr6 (195-285)||(31975661-31975751)
chr6 (198-291)||(3000244-3000337)
chr6 (194-322)||(16438706-16438835)
chr6 (195-291)||(2606896-2606992)
chr6 (165-308)||(15381497-15381641)
chr6 (196-279)||(7497548-7497631)
chr6 (194-285)||(31535069-31535160)
chr6 (194-291)||(31067880-31067977)
chr6 (192-269)||(28900863-28900940)
chr6 (194-291)||(31896085-31896182)
chr6 (196-291)||(14262092-14262187)
chr6 (196-291)||(34758735-34758830)
chr6 (225-291)||(4200107-4200173)
chr6 (244-291)||(24194463-24194511)
[»] chr4 (53 HSPs)
chr4 (155-329)||(6487284-6487460)
chr4 (160-313)||(51967243-51967396)
chr4 (155-329)||(40162750-40162925)
chr4 (157-329)||(9972736-9972910)
chr4 (155-311)||(56423961-56424117)
chr4 (155-311)||(26448592-26448748)
chr4 (156-329)||(29966362-29966523)
chr4 (158-312)||(8563342-8563497)
chr4 (186-313)||(54561211-54561338)
chr4 (155-294)||(21486476-21486615)
chr4 (186-313)||(23170715-23170842)
chr4 (155-270)||(25013407-25013522)
chr4 (154-327)||(40487632-40487801)
chr4 (155-251)||(3860230-3860326)
chr4 (155-251)||(3868987-3869083)
chr4 (199-313)||(41470319-41470424)
chr4 (193-291)||(29469162-29469260)
chr4 (158-313)||(21306289-21306444)
chr4 (193-291)||(8084208-8084306)
chr4 (192-324)||(24966491-24966624)
chr4 (195-291)||(42937417-42937513)
chr4 (166-292)||(14334366-14334492)
chr4 (192-324)||(50517191-50517324)
chr4 (193-312)||(49501166-49501286)
chr4 (193-312)||(49507231-49507351)
chr4 (198-279)||(23671392-23671473)
chr4 (158-308)||(25842986-25843132)
chr4 (193-317)||(49834462-49834587)
chr4 (160-280)||(871776-871895)
chr4 (195-303)||(26491117-26491225)
chr4 (165-321)||(26955301-26955464)
chr4 (193-317)||(28484343-28484469)
chr4 (192-271)||(33138798-33138877)
chr4 (196-291)||(41725564-41725659)
chr4 (192-291)||(46286707-46286806)
chr4 (158-280)||(55165489-55165611)
chr4 (227-312)||(22479852-22479937)
chr4 (194-291)||(29510072-29510169)
chr4 (193-317)||(29855964-29856089)
chr4 (193-285)||(32322514-32322606)
chr4 (194-291)||(5441851-5441948)
chr4 (194-317)||(5800413-5800537)
chr4 (194-290)||(27768513-27768609)
chr4 (193-291)||(23987645-23987742)
chr4 (194-291)||(37828085-37828182)
chr4 (194-291)||(48261527-48261624)
chr4 (237-301)||(40317593-40317657)
chr4 (237-301)||(40327667-40327731)
chr4 (193-280)||(30967009-30967096)
chr4 (158-242)||(2326716-2326801)
chr4 (194-291)||(54341591-54341688)
chr4 (193-277)||(32889895-32889979)
chr4 (239-291)||(37916283-37916335)
[»] chr7 (48 HSPs)
chr7 (155-313)||(14732276-14732434)
chr7 (154-329)||(35313517-35313694)
chr7 (155-329)||(21024027-21024202)
chr7 (155-310)||(19594172-19594326)
chr7 (163-313)||(34656574-34656724)
chr7 (155-329)||(38910442-38910618)
chr7 (167-329)||(37392598-37392751)
chr7 (170-301)||(1254461-1254592)
chr7 (193-291)||(14741425-14741523)
chr7 (206-299)||(6268513-6268606)
chr7 (193-291)||(4639877-4639975)
chr7 (193-280)||(12740816-12740903)
chr7 (193-291)||(48136889-48136987)
chr7 (195-280)||(11735204-11735289)
chr7 (193-317)||(37972511-37972636)
chr7 (193-317)||(8675777-8675903)
chr7 (193-317)||(29893418-29893543)
chr7 (193-317)||(44121567-44121692)
chr7 (194-291)||(44256416-44256513)
chr7 (193-312)||(29585960-29586080)
chr7 (194-317)||(37328354-37328478)
chr7 (193-291)||(16709434-16709530)
chr7 (193-291)||(17683670-17683766)
chr7 (195-310)||(31174710-31174825)
chr7 (158-280)||(27148809-27148931)
chr7 (193-291)||(40460375-40460473)
chr7 (193-291)||(42610616-42610714)
chr7 (194-291)||(510093-510190)
chr7 (193-302)||(28034498-28034607)
chr7 (194-291)||(28342758-28342855)
chr7 (160-271)||(36415080-36415188)
chr7 (194-291)||(39784554-39784651)
chr7 (216-291)||(7993626-7993701)
chr7 (193-280)||(18838856-18838943)
chr7 (193-280)||(26201804-26201891)
chr7 (195-317)||(41827776-41827899)
chr7 (193-271)||(32884217-32884295)
chr7 (194-280)||(33497107-33497193)
chr7 (194-291)||(29614456-29614553)
chr7 (194-271)||(37915919-37915996)
chr7 (196-291)||(33891895-33891990)
chr7 (193-260)||(43172153-43172220)
chr7 (155-193)||(6213015-6213053)
chr7 (236-317)||(21067869-21067951)
chr7 (225-291)||(23017023-23017089)
chr7 (194-291)||(23101738-23101835)
chr7 (194-317)||(21486142-21486266)
chr7 (225-312)||(30823116-30823204)
[»] chr2 (39 HSPs)
chr2 (155-313)||(38413436-38413594)
chr2 (160-313)||(13898442-13898595)
chr2 (160-313)||(14039059-14039212)
chr2 (155-313)||(19948499-19948657)
chr2 (186-310)||(3991765-3991889)
chr2 (155-309)||(33262814-33262968)
chr2 (155-313)||(41978798-41978956)
chr2 (160-313)||(12877652-12877796)
chr2 (227-329)||(45161097-45161201)
chr2 (158-303)||(11153342-11153487)
chr2 (158-313)||(43318743-43318886)
chr2 (193-291)||(18899932-18900030)
chr2 (198-323)||(24025852-24025978)
chr2 (194-291)||(35404323-35404420)
chr2 (165-308)||(30850239-30850381)
chr2 (199-311)||(37810867-37810979)
chr2 (198-283)||(15224234-15224319)
chr2 (193-323)||(40829635-40829766)
chr2 (198-291)||(2308718-2308811)
chr2 (194-291)||(18177720-18177817)
chr2 (215-321)||(18727620-18727727)
chr2 (193-291)||(379378-379476)
chr2 (193-291)||(10657878-10657976)
chr2 (194-280)||(15926378-15926464)
chr2 (193-291)||(28739950-28740048)
chr2 (193-317)||(25288611-25288736)
chr2 (194-303)||(26789234-26789343)
chr2 (195-291)||(3575291-3575387)
chr2 (193-277)||(3858440-3858524)
chr2 (158-308)||(28545724-28545860)
chr2 (194-291)||(6224233-6224330)
chr2 (194-291)||(7027352-7027449)
chr2 (194-291)||(28845034-28845131)
chr2 (225-312)||(38295700-38295788)
chr2 (193-280)||(33136064-33136151)
chr2 (225-291)||(43825320-43825386)
chr2 (275-308)||(34138064-34138097)
chr2 (225-317)||(43078970-43079063)
chr2 (194-313)||(13833052-13833172)
[»] chr5 (29 HSPs)
chr5 (153-310)||(34909551-34909708)
chr5 (161-323)||(21238729-21238893)
chr5 (155-307)||(2675062-2675214)
chr5 (155-312)||(33892824-33892982)
chr5 (154-312)||(25868759-25868909)
chr5 (20-154)||(41804403-41804537)
chr5 (153-313)||(19222982-19223129)
chr5 (158-317)||(16800693-16800851)
chr5 (164-302)||(16497729-16497867)
chr5 (163-323)||(31913467-31913628)
chr5 (193-291)||(7125169-7125267)
chr5 (198-323)||(5651158-5651284)
chr5 (194-291)||(28623171-28623268)
chr5 (157-244)||(24258534-24258621)
chr5 (193-317)||(4240095-4240220)
chr5 (195-311)||(29716774-29716891)
chr5 (174-301)||(3032287-3032413)
chr5 (193-291)||(1460802-1460900)
chr5 (193-291)||(37798124-37798222)
chr5 (196-291)||(5949562-5949657)
chr5 (194-280)||(16548860-16548946)
chr5 (194-280)||(29758706-29758791)
chr5 (193-291)||(37014302-37014400)
chr5 (194-291)||(39852819-39852916)
chr5 (193-285)||(4549920-4550012)
chr5 (195-291)||(15286536-15286634)
chr5 (194-280)||(13926380-13926466)
chr5 (230-308)||(29964138-29964215)
chr5 (230-308)||(30010583-30010660)
[»] scaffold0246 (2 HSPs)
scaffold0246 (155-312)||(1328-1486)
scaffold0246 (154-327)||(25571-25740)
[»] chr8 (30 HSPs)
chr8 (20-154)||(3385121-3385255)
chr8 (155-329)||(28317026-28317211)
chr8 (155-301)||(41252125-41252271)
chr8 (153-311)||(33177831-33177989)
chr8 (158-278)||(1527921-1528041)
chr8 (193-291)||(19484214-19484312)
chr8 (194-323)||(8029811-8029941)
chr8 (198-281)||(6388139-6388222)
chr8 (193-291)||(10294994-10295092)
chr8 (161-305)||(4871099-4871243)
chr8 (196-280)||(17234716-17234800)
chr8 (193-312)||(31625756-31625876)
chr8 (193-291)||(9288149-9288247)
chr8 (204-274)||(12522528-12522598)
chr8 (193-291)||(26856553-26856651)
chr8 (200-321)||(27878607-27878729)
chr8 (200-321)||(28018788-28018910)
chr8 (193-317)||(32497989-32498114)
chr8 (193-312)||(24067105-24067224)
chr8 (193-291)||(18305631-18305729)
chr8 (194-280)||(37131301-37131387)
chr8 (193-291)||(43166331-43166429)
chr8 (194-291)||(14781787-14781884)
chr8 (194-291)||(44725446-44725543)
chr8 (239-303)||(12522425-12522489)
chr8 (196-271)||(41393958-41394033)
chr8 (198-280)||(16364159-16364241)
chr8 (192-321)||(27915551-27915681)
chr8 (192-321)||(27961970-27962100)
chr8 (194-291)||(43308163-43308260)
[»] scaffold0433 (1 HSPs)
scaffold0433 (155-251)||(351-447)
[»] scaffold0421 (1 HSPs)
scaffold0421 (225-312)||(1730-1817)
[»] scaffold1128 (1 HSPs)
scaffold1128 (193-291)||(908-1006)
[»] scaffold0110 (1 HSPs)
scaffold0110 (193-317)||(39264-39389)
[»] scaffold1504 (1 HSPs)
scaffold1504 (193-300)||(1314-1421)
[»] scaffold0383 (1 HSPs)
scaffold0383 (225-304)||(16672-16751)
[»] scaffold0152 (2 HSPs)
scaffold0152 (225-304)||(20908-20987)
scaffold0152 (225-304)||(28814-28893)
[»] scaffold0543 (1 HSPs)
scaffold0543 (193-291)||(10972-11070)
[»] scaffold0042 (1 HSPs)
scaffold0042 (193-317)||(57693-57818)
[»] scaffold0013 (1 HSPs)
scaffold0013 (194-291)||(89280-89377)
[»] scaffold0573 (1 HSPs)
scaffold0573 (192-269)||(8854-8931)
[»] scaffold0347 (1 HSPs)
scaffold0347 (216-285)||(15132-15201)


Alignment Details
Target: chr3 (Bit Score: 151; Significance: 8e-80; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 151 - 313
Target Start/End: Complemental strand, 9818708 - 9818546
Alignment:
Q  151 gcatcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggttttt 250  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  9818708 gcatcactgttccacaaatcgagtgttaacacgtaaactcgcccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgattttt 9818609  T
Q  251 ggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9818608 ggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 9818546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 155 - 313
Target Start/End: Original strand, 49293764 - 49293922
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    ||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || | | |  |||||||| |||||||||    
T  49293764 cactgtttcataaatcgagtgttaactcgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtataaatttgaaaataaactcgatttttggtg 49293863  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  49293864 aaatcggaaagtttgacgagtttgaccgaattaacacgtgttaaattcggtaaactcgt 49293922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 161 - 303
Target Start/End: Original strand, 37832539 - 37832681
Alignment:
Q  161 tccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcg 260  Q
    |||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| | || |||||| ||||||  |||||||||||||||     
T  37832539 tccataaattgagtgttaactcgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtgtaaattcggagataaacttagtttttggtgaaatca 37832638  T
Q  261 gaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg 303  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  37832639 gaaagtttgacgagtttgaccgagttaacacgtgttaaactcg 37832681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 164 - 313
Target Start/End: Original strand, 40064248 - 40064397
Alignment:
Q  164 acaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaa 263  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||| | |||| ||||||||| |  |||||||||||||||| ||    
T  40064248 acaaatcgagtgttaattcgtaaattcgtccgagtttacgtttttaggtggcaaaaacgtgtaaacttggaggtaaatttagtttttggtgaaatcgaaa 40064347  T
Q  264 agtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||||||    
T  40064348 agtttgacgaatttgaccaagttaacacgtgttaaactcggtaaactcgt 40064397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 157 - 276
Target Start/End: Complemental strand, 53645451 - 53645332
Alignment:
Q  157 ctgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaa 256  Q
    |||||| | ||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  53645451 ctgttctaaaaatcgagtgttaactcgtaaactcgtctgagttaacgtttttaggtggcaaaaacgtataaactcagaggtaaactcagtttttggtgaa 53645352  T
Q  257 atcggaaagtttgacgagtt 276  Q
    ||||||||||||||||||||    
T  53645351 atcggaaagtttgacgagtt 53645332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 27261368 - 27261530
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||||||||||||||||||||| |||||||| | ||||||||  ||||||| |||||||||||||            ||||||||| |||||||||    
T  27261368 cactgttccacaaatcgagtgttaactcgtaaacttgcccgagttt--gtttttaagtggcaaaaacgt------------gtaaactcgatttttggtg 27261453  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg--gtaaactcgtccgagtttacctttga 329  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  27261454 aaatcggaaagtttgacgaatttgactgagttaacacgtgttaaactcggagtaaactcgtccgagtttacctttga 27261530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 158 - 313
Target Start/End: Original strand, 29690596 - 29690750
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    ||||||| ||||||||||||||| |||||| ||||  |  |||||||||||||||| |||||| ||||||| |||||| |||| | |||||||| |||||    
T  29690596 tgttccataaatcgagtgttaactcgtaaattcgtttgtatttacgtttttaggtgtcaaaaatgtattaattcggagataaatttggtttttg-tgaaa 29690694  T
Q  258 tcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    || ||| || |||||||||||||||||| ||||||||||||||| |||||||||||    
T  29690695 tcagaatgtatgacgagtttgaccgagttaacacgtgttaaacttggtaaactcgt 29690750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 323
Target Start/End: Complemental strand, 19387027 - 19386863
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    ||||||||||||||||||||||| | ||| ||| | ||||||||||| |||||||| |||||| || |||||||||| ||||||||  || ||| | |||    
T  19387027 tgttccacaaatcgagtgttaactcataatctcatacgagtttacgtatttaggtgtcaaaaatgtgttaactcggatgtaaactcaattattgataaaa 19386928  T
Q  258 tcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgtccgagtttac 323  Q
    | |||| || ||| |||||||||||||| |||||||||||||||  ||||||||| ||||||||||    
T  19386927 ttggaatgtctga-gagtttgaccgagttaacacgtgttaaacttcgtaaactcgaccgagtttac 19386863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 47467481 - 47467394
Alignment:
Q  225 ttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcg 312  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  47467481 ttaactcgaaggtaaactcggtttttggtgaaatcgaaaattttgacgagtttgaccgagttaacacgtgttaaacttggtaaactcg 47467394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 8598658 - 8598756
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||    
T  8598658 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacac 8598756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 312
Target Start/End: Complemental strand, 30238633 - 30238477
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtg-gcaaaaacgtattaactcggaggtaaactcggtttttggtgaa 256  Q
    ||||||||||||||||||||||| ||||| |||   |||||||||||||||||||| | |||||||| |||||||||||||||| | ||||||| |  ||    
T  30238633 tgttccacaaatcgagtgttaacgcgtaatctctatcgagtttacgtttttaggtgcgaaaaaacgtgttaactcggaggtaaatttggtttttaggaaa 30238534  T
Q  257 atcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcg 312  Q
    | || || |||||| |||||||||||| | ||||| ||||||||||| |||||||||    
T  30238533 aacgaaatgtttgatgagtttgaccgaattaacacatgttaaactcgagtaaactcg 30238477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 49296115 - 49296213
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| |||| |||||| |||||||||||||||||||||||| |||||    
T  49296115 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcgaaaagtttgacgagtttgaccgagttaacac 49296213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 192 - 321
Target Start/End: Original strand, 16155162 - 16155292
Alignment:
Q  192 tccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||| |||||||||||||||  ||||| ||| ||||||| ||||||||||||||||||| | |||| |||| ||||||||||||||||||||| |||||    
T  16155162 tccgaatttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttttgataaaattggaaggtttgacgagtttgaccgagttaacac 16155261  T
Q  292 gtgttaaactcg-gtaaactcgtccgagttt 321  Q
        |||||||| ||||||||| ||||||||    
T  16155262 tcagtaaactcgtgtaaactcgaccgagttt 16155292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 53835961 - 53836059
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||| ||||||||||| | ||| |||| ||||||||||||||||||||||||||||||| |||||    
T  53835961 ccgagtttacgtgtttaggtgctaaaaacgtgttaacttggaggtaaacttgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacac 53836059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 153 - 280
Target Start/End: Original strand, 7665550 - 7665677
Alignment:
Q  153 atcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttgg 252  Q
    |||| ||||||||||||||||||||||| ||   | |   || ||||||||||||||| |  ||||| ||| |||||||||||||||||||| |||||||    
T  7665550 atcaatgttccacaaatcgagtgttaactcgccgaatttacctagtttacgtttttagctaccaaaatcgtgttaactcggaggtaaactcgatttttgg 7665649  T
Q  253 tgaaatcggaaagtttgacgagtttgac 280  Q
    | |||||||||  |||||||||||||||    
T  7665650 taaaatcggaatatttgacgagtttgac 7665677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 322
Target Start/End: Complemental strand, 4962832 - 4962703
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgt 293  Q
    |||||||||||||||||||  ||||| ||| |||||| ||||||||||||| |||   || |||||| || ||||||||||||||||||||| |||||      
T  4962832 cgagtttacgtttttaggtatcaaaatcgtgttaacttggaggtaaactcgatttcaagtaaaatcgaaaggtttgacgagtttgaccgagttaacactc 4962733  T
Q  294 gttaaactc-ggtaaactcgtccgagttta 322  Q
    | |||||||  ||||||||| |||||||||    
T  4962732 ggtaaactcatgtaaactcgaccgagttta 4962703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 22489585 - 22489488
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||| |||||||| ||||||||| |||| || || ||||||||| ||| |||| ||||||||| |||| |||||||||||||||| |||||    
T  22489585 cgagtttacgtgtttaggtgccaaaaacgtgttaaatcagatgtaaactcgatttctggtaaaatcggaaggtttaacgagtttgaccgagttaacac 22489488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 20833344 - 20833468
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgt 293  Q
    |||||||||||||||||||   |||| ||| ||||||| ||||||||||| |||| |||| ||||||||| |||| ||||||||||| |||| |||||      
T  20833344 cgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggtaaaatcggaaggtttaacgagtttgactgagttaacactc 20833443  T
Q  294 gttaaactcg-gtaaactcgtccga 317  Q
    | |||||||| ||||||||| ||||    
T  20833444 ggtaaactcgtgtaaactcgaccga 20833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 21386586 - 21386494
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagt 285  Q
    |||||||||| |||||||||  ||||| ||| ||||||  |||||||||||| ||| |||| |||||| ||||||||||||||||||||||||    
T  21386586 ccgagtttacatttttaggtatcaaaatcgtgttaacttagaggtaaactcgatttctggtaaaatcgaaaagtttgacgagtttgaccgagt 21386494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 321
Target Start/End: Original strand, 33693277 - 33693384
Alignment:
Q  215 caaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcgt 313  Q
    ||||| ||| |||||| ||||||||||||| ||| |||| ||||| ||| ||||||||||||||||||||| |||||  | |||||||| |||||||||     
T  33693277 caaaatcgtgttaacttggaggtaaactcgatttctggtaaaatcagaaggtttgacgagtttgaccgagttaacactcggtaaactcgtgtaaactcga 33693376  T
Q  314 ccgagttt 321  Q
    ||||||||    
T  33693377 ccgagttt 33693384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 311
Target Start/End: Complemental strand, 2118573 - 2118430
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    ||||| ||||||  |||||||||  |||||||||||||||| ||| |||| |||||  |||||||| |||||||| ||||||||||| ||||| ||||||    
T  2118573 tgttctacaaattaagtgttaactagtaaactcgtccgagtgtacatttt-aggtgcaaaaaacgtgttaactcgaaggtaaactcgattttttgtgaaa 2118475  T
Q  258 tcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactc 311  Q
    ||| ||           ||||||||||| |||||||||||||||||||||||||    
T  2118474 tcgaaa---------tatttgaccgagttaacacgtgttaaactcggtaaactc 2118430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 319
Target Start/End: Complemental strand, 7437671 - 7437546
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtg 294  Q
    |||||||| | |||||||  ||||| ||| ||||| ||||| ||||||||||||||||| ||||||||| || ||  |||||||||||||| |||||  |    
T  7437671 gagtttacttgtttaggtaccaaaatcgtgttaacacggagataaactcggtttttggtaaaatcggaaggtatggtgagtttgaccgagttaacactcg 7437572  T
Q  295 ttaaactcg-gtaaactcgtccgagt 319  Q
     |||||||| ||||||||| ||||||    
T  7437571 gtaaactcgtgtaaactcgaccgagt 7437546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 50903062 - 50902938
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgt 293  Q
    |||||||||||||||| ||   |||| ||| ||||||| |||||||||||||||| |||| |||| |||| |||| ||||||||||| |||| |||||      
T  50903062 cgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactc 50902963  T
Q  294 gttaaactcg-gtaaactcgtccga 317  Q
    | |||||||| ||||||||| ||||    
T  50902962 ggtaaactcgtgtaaactcgaccga 50902938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 25049870 - 25049957
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    ||||||||||||||||||||  ||||| ||| | |||||||||||||||||| ||| | || ||||||||| |||||| |||||||||    
T  25049870 ccgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgatttctagtaaaatcggaatgtttgatgagtttgac 25049957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 9032055 - 9031981
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcg 232  Q
    ||||| ||||||| | ||||||| |||||| |||||||||||||| |||||||||||| ||||||| ||||||||    
T  9032055 tgttcaacaaatcaaatgttaactcgtaaattcgtccgagtttacatttttaggtggccaaaacgtgttaactcg 9031981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 52617721 - 52617639
Alignment:
Q  198 tttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    |||||||||||||||   |||| ||| ||||||| |||||||||||||||| |||| ||||||||| |||| |||||||||||    
T  52617721 tttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcggaaggtttaacgagtttgac 52617639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 52810804 - 52810902
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||   ||||  || ||||||| ||||||||||||| || |||| ||||||||| |||| ||||||||||| |||| |||||    
T  52810804 ccgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcgggttctggtaaaatcggaaggtttaacgagtttgactgagttaacac 52810902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 17946675 - 17946760
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttga 279  Q
    |||||||||||||||||||   |||| | | ||||||| |||||||||||||||| |||| ||||||||| |||| ||||||||||    
T  17946675 cgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggtaaaatcggaaggtttaacgagtttga 17946760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 51737440 - 51737343
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||||||||||| | || ||||||||| |||| ||||||||||| |||| |||||    
T  51737440 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcggaaggtttaacgagtttgactgagttaacac 51737343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 49458358 - 49458486
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgt 293  Q
    ||||||||||| |||||||  |||||  || ||||||| || ||||||||| ||| |||| ||||||||| ||||||||||||||||| | | |||||      
T  49458358 cgagtttacgtgtttaggtatcaaaattgtgttaactctgaagtaaactcgatttctggtaaaatcggaaggtttgacgagtttgaccaaattaacactc 49458457  T
Q  294 gttaaactcg-gtaaactcgtccgagttt 321  Q
      |||||||| ||||||||| ||||||||    
T  49458458 agtaaactcgtgtaaactcgaccgagttt 49458486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 26107776 - 26107895
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgt 293  Q
    |||||||||||||||||||   |||| | | ||||||| |||||||||||| ||| ||||  |||||||| |||| ||||||||||| |||| |||||      
T  26107776 cgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcgatttctggtacaatcggaaggtttaacgagtttgactgagttaacactc 26107875  T
Q  294 gttaaactcg-gtaaactcg 312  Q
    | |||||||| |||||||||    
T  26107876 ggtaaactcgtgtaaactcg 26107895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 23753143 - 23753045
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||| |||||||||   |||| ||| ||||||| |||||||| |||||||||||| |||| |||| |||| || |||||||| |||| |||||    
T  23753143 ccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttttggtaaaattggaaggtttaaccagtttgactgagttaacac 23753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 37455293 - 37455391
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||| ||||||||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  37455293 ccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 37455391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 39038541 - 39038623
Alignment:
Q  198 tttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    |||||||||||||||   ||||  || ||||||| |||||||||||||||| |||| ||||||||| |||| |||||||||||    
T  39038541 tttacgtttttaggtacaaaaatggtgttaactctgaggtaaactcggtttctggtaaaatcggaaggtttaacgagtttgac 39038623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 48379596 - 48379694
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||   |||| ||| |||| || |||||||||||| ||| |||| ||||||||| | || ||||||||||| |||| |||||    
T  48379596 ccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcgatttctggtaaaatcggaaggcttaacgagtttgactgagttaacac 48379694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 50761854 - 50761756
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||   |||| ||| ||||||| |||||||| | | ||| ||||||||| |||| |||| ||||||||||| |||| |||||    
T  50761854 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatagatttctggtgaaattggaaggtttaacgagtttgactgagttaacac 50761756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 18750091 - 18750187
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||   |||| | | ||||||| |||||||||||||||| |||| |||| |||| | || ||||||||||| |||| |||||    
T  18750091 gagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggtaaaattggaaggcttaacgagtttgactgagttaacac 18750187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 259
Target Start/End: Complemental strand, 27994899 - 27994807
Alignment:
Q  167 aatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatc 259  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||   ||||| | | | |||||||| | ||||||| |||||||| |||||    
T  27994899 aatcgagtgttaaaacgtaaactcgcccgagtttacgtgtttaggaaccaaaatcatgtaaactcggacgaaaactcgttttttggtaaaatc 27994807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 31646015 - 31645917
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||| ||||||||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| | ||||||||| |||| |||||    
T  31646015 ccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaaagagtttgactgagttaacac 31645917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 36673883 - 36673808
Alignment:
Q  216 aaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  36673883 aaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 36673808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 277
Target Start/End: Original strand, 43172927 - 43173010
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagttt 277  Q
    |||||||| || |||||||  ||||| ||| || ||||||||||||||||| ||| |||| |||||| || |||||| ||||||    
T  43172927 cgagtttatgtgtttaggtaccaaaatcgtgttgactcggaggtaaactcgatttctggtaaaatcgaaaggtttgaagagttt 43173010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 40897577 - 40897675
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||| |||||| ||||||||   |||| ||| ||||||| |||||||| ||||||| || | |||| |||| |||| ||||||||||| |||| |||||    
T  40897577 ccgaatttacgattttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgataaaattggaaggtttaacgagtttgactgagttaacac 40897675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 279
Target Start/End: Original strand, 54629297 - 54629383
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttga 279  Q
    ||||||||||||||||||||   |||| ||| ||||||| |||||||||||| ||| || | ||| || || |||| ||||||||||    
T  54629297 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctgataaaagcgaaaggtttaacgagtttga 54629383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 3e-79; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 7798482 - 7798658
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7798482 cactgttccacaaatcgagtattaacacgtaaactcgcccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtg 7798581  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactc--ggtaaactcgtccgagtttacctttga 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  7798582 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcagagtaaactcgtccgagtttacctttga 7798658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 156 - 321
Target Start/End: Original strand, 1108335 - 1108500
Alignment:
Q  156 actgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtga 255  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||    
T  1108335 actgttccacaaatcgagtgttaactcgtaaattcgtctgagtttacgtttttaggtggtaaaaacgtgtaaactcggaggtaaactcggtttttggtga 1108434  T
Q  256 aatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgtccgagttt 321  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||| |||||||||| ||||||    
T  1108435 aatcggaaagtttgacgagtttgactgagttaacgcgtgttaaactcgataaactcgtctgagttt 1108500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 153 - 313
Target Start/End: Original strand, 34019099 - 34019259
Alignment:
Q  153 atcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttgg 252  Q
    |||||| || ||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||| || |||||||||||||||| ||| |||||||    
T  34019099 atcactctttcacaaattgagtgttaactcgtaaactcgtccgagtttacgttttaaggtggcaaaaatgtgttaactcggaggtaaattcgatttttgg 34019198  T
Q  253 tgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  34019199 tgaaatcggaaagtttgacgaggttgaccgagttaacacgtgttaaattcggtaaactcgt 34019259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 153 - 313
Target Start/End: Complemental strand, 34751713 - 34751553
Alignment:
Q  153 atcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttgg 252  Q
    |||| |||||||||||| ||| |||||| |||||| ||| |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||    
T  34751713 atcattgttccacaaattgagggttaactcgtaaattcgaccgagtttacgtttttaaatggcaaaaacgtgttaactcggaggtaaactcggtttttgg 34751614  T
Q  253 tgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  34751613 tgaaatcggaaagtttgccaagtttgaccgagttaacacgtgttaaactcggtaaactcgt 34751553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 201 - 313
Target Start/End: Complemental strand, 33886953 - 33886841
Alignment:
Q  201 acgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaac 300  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33886953 acgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaac 33886854  T
Q  301 tcggtaaactcgt 313  Q
    |||||||||||||    
T  33886853 tcggtaaactcgt 33886841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 201 - 313
Target Start/End: Original strand, 33957297 - 33957409
Alignment:
Q  201 acgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaac 300  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33957297 acgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaac 33957396  T
Q  301 tcggtaaactcgt 313  Q
    |||||||||||||    
T  33957397 tcggtaaactcgt 33957409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 18954447 - 18954613
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  18954447 cactgttccacaaatcgagtgttaactcgtaaattcgcccgagtttacgtttttaggtggcaaaaacgtgttaactcggacgtaaactcggtttttggtg 18954546  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcgtccgagtttacctttga 329  Q
    |||||||||         ||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  18954547 aaatcggaa---------agtttgaccgagttaacatgtgttaaactcgtgtaaactcgtccgagtttacctttga 18954613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 4005087 - 4005185
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||    
T  4005087 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacac 4005185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 1243404 - 1243309
Alignment:
Q  196 agtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||    
T  1243404 agtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacac 1243309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 9192044 - 9192142
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||| |||||    
T  9192044 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcagaaagtttgacgagtttgaccgagttaacac 9192142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 41353441 - 41353539
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| || ||||||||  |||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||    
T  41353441 ccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacac 41353539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 51106912 - 51107010
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||    
T  51106912 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggaaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacac 51107010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 8147337 - 8147435
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| |||| |||| | |||||||||||||||||||||||| |||||    
T  8147337 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaattgcaaagtttgacgagtttgaccgagttaacac 8147435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 26757635 - 26757733
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||  ||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||    
T  26757635 ccgagtttacgtgtttaggtgctaaaaacgagttaactcagaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacac 26757733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 11579200 - 11579103
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||| ||||||||  |||||||| |||||||||||||||| | | ||| |||| ||||||||||||||||||||||||||||||| |||||    
T  11579200 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaatttgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacac 11579103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 194 - 321
Target Start/End: Complemental strand, 47371675 - 47371547
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgt 293  Q
    |||||||||||  ||||||  ||||| ||| |||||||||||||||||||| ||| |||| ||||||||| ||||| ||||||||||||||| |||||      
T  47371675 cgagtttacgtacttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaaggtttgccgagtttgaccgagttaacactc 47371576  T
Q  294 gttaaactcg-gtaaactcgtccgagttt 321  Q
    | |||||||| ||||||||| ||||||||    
T  47371575 ggtaaactcgtgtaaactcgaccgagttt 47371547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 5494849 - 5494751
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||  ||||| ||| ||||||| |||||||||||||||| |||| ||||| ||| |||||| ||||||||| |||| |||||    
T  5494849 ccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcagaaggtttgatgagtttgactgagttaacac 5494751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 5209464 - 5209371
Alignment:
Q  198 tttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||| |||||||  ||||| ||| ||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||| ||||| |||||    
T  5209464 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtcaactcgatttctggtgaaatcagaaagtttgacgagtttgatcgagttaacac 5209371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 45273015 - 45273112
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||||||||||   ||||  || ||||||| |||||||||||||||| |||| ||||||||| |||||||||||||||| |||| |||||    
T  45273015 cgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggtaaaatcggaaggtttgacgagtttgactgagttaacac 45273112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 29027978 - 29028030
Alignment:
Q  166 aaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaa 218  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29027978 aaatcgagtgttaactcgtaaactcgtccgagtttacgtttttaggtggcaaa 29028030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 208 - 323
Target Start/End: Complemental strand, 42304586 - 42304470
Alignment:
Q  208 taggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gta 306  Q
    |||||| ||||| | | |||| ||||||||||||||||||| |||| |||| |||| |||| |||||||||||||||| |||||  | |||||||| |||    
T  42304586 taggtgccaaaatcatgttaattcggaggtaaactcggtttctggtaaaattggaaggtttaacgagtttgaccgagttaacactaggtaaactcgtgta 42304487  T
Q  307 aactcgtccgagtttac 323  Q
    |||||| ||||||||||    
T  42304486 aactcgaccgagtttac 42304470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 3583657 - 3583559
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||  | ||| ||| ||||||  || ||||||||||||| | || ||||||||||||||||||||||| ||||||| |||||    
T  3583657 ccgagtttacgtttttaggtaccgaaatcgtgttaacttagaagtaaactcggtttctagtaaaatcggaaagtttgacgagtttaaccgagttaacac 3583559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 323
Target Start/End: Complemental strand, 32760198 - 32760069
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtg 294  Q
    ||||||||||||||||||  ||||| ||| ||||||| |||||||||||||||| | || ||||||| | | || |||||||||||||||| |||||       
T  32760198 gagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcgggaggcttaacgagtttgaccgagttaacactca 32760099  T
Q  295 ttaaactcg-gtaaactcgtccgagtttac 323  Q
     |||||||| |||||||||  |||||||||    
T  32760098 ctaaactcgtgtaaactcgatcgagtttac 32760069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 46328433 - 46328558
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    ||||||||||||||||||||   |||| ||| ||||||| |||||||||||||||| || | ||||||||| |||| ||||||||||  |||| |||||     
T  46328433 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctgttaaaatcggaaggtttaacgagtttgattgagttaacact 46328532  T
Q  293 tgttaaactcg-gtaaactcgtccga 317  Q
     | |||||||| ||||||||| ||||    
T  46328533 cggtaaactcgtgtaaactcgaccga 46328558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 322
Target Start/End: Complemental strand, 48966590 - 48966462
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtg 294  Q
    |||||||||| |||||||  ||||| ||| ||||||| |||||||||| | ||| || |||||| |||| ||||||||||||||||||||| || ||  |    
T  48966590 gagtttacgtgtttaggtaccaaaatcgtgttaactctgaggtaaacttgatttctgatgaaattggaaggtttgacgagtttgaccgagttaatactcg 48966491  T
Q  295 ttaaactcg-gtaaactcgtccgagttta 322  Q
     |||||||| ||||||||  |||||||||    
T  48966490 gtaaactcgtgtaaactctaccgagttta 48966462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 48177192 - 48177095
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttt-tggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||||||||| | |||| ||| ||||||| |||||||| |||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  48177192 gagtttacgtttttaggtagaaaaatcgtgttaactctgaggtaaaatcggttttctggtaaaattggaaggtttaacgagtttgactgagttaacac 48177095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 279
Target Start/End: Complemental strand, 21248610 - 21248490
Alignment:
Q  159 gttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaat 258  Q
    |||||| || |||||||||||  |||| ||||   | |||||||||||||||||| ||||| ||| |||||| ||| ||||| | | |||||| ||||||    
T  21248610 gttccataagtcgagtgttaaatcgtagactcagactagtttacgtttttaggtgtcaaaatcgtgttaacttggaagtaaaatggttttttgttgaaat 21248511  T
Q  259 cggaaagtttgacgagtttga 279  Q
     |||| |||||||||||||||    
T  21248510 tggaatgtttgacgagtttga 21248490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 280
Target Start/End: Complemental strand, 49971697 - 49971609
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagt-ttgacgagtttgac 280  Q
    ||||||||||||||||||||  ||||| ||| | |||||||||||||||||| ||| |||| |||||| || || ||||||||||||||    
T  49971697 ccgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgttttctggtaaaatcgaaatgtgttgacgagtttgac 49971609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 49231454 - 49231541
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    ||||||||| ||||||||||   |||| ||| ||||||| |||||||||||||||| ||||  |||||||| |||| |||||||||||    
T  49231454 ccgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtataatcggaaggtttaacgagtttgac 49231541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 285
Target Start/End: Complemental strand, 49237066 - 49236975
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagt 285  Q
    |||||||| || |||||||  ||||| ||| |||| |||||| ||| |||||||| |||| |||||| || |||||||||||||||||||||    
T  49237066 cgagtttatgtgtttaggtaccaaaaccgtgttaattcggagttaagctcggtttctggtaaaatcgaaaggtttgacgagtttgaccgagt 49236975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 15834785 - 15834687
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||| |||||||||   |||| ||| ||||||| |||||||| ||| |||||||| |||| |||| |||| ||||||||||| |||| |||||    
T  15834785 ccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggtaaaattggaaggtttaacgagtttgactgagttaacac 15834687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 27257954 - 27257872
Alignment:
Q  198 tttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    |||||||||||||||  ||||| ||| | ||||| |||||||||| | |||| ||| ||||||||| ||||||||||||||||    
T  27257954 tttacgtttttaggtaccaaaatcgtgtcaactccgaggtaaacttgattttcggtaaaatcggaatgtttgacgagtttgac 27257872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 6313024 - 6313121
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  6313024 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 6313121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 15927351 - 15927416
Alignment:
Q  225 ttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaaca 290  Q
    ||||||| |||||||| ||||||| || | |||||||||||||||||||||||||| |||| ||||    
T  15927351 ttaactctgaggtaaattcggtttctgataaaatcggaaagtttgacgagtttgactgagttaaca 15927416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 25612540 - 25612637
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  25612540 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 25612637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 323
Target Start/End: Complemental strand, 28404045 - 28403916
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtg 294  Q
    |||||||| |||||||||  ||||| ||| |||||| | ||||||| ||||||| |  | |||||| || ||||||||| ||||||||||| |||||  |    
T  28404045 gagtttacatttttaggtaccaaaatcgtgttaacttgaaggtaaattcggtttctaataaaatcgaaatgtttgacgaatttgaccgagttaacactcg 28403946  T
Q  295 ttaaactc-ggtaaactcgtccgagtttac 323  Q
     |||||||  ||||||||| ||||||||||    
T  28403945 gtaaactcatgtaaactcgaccgagtttac 28403916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 29396184 - 29396087
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  29396184 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 29396087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 35177306 - 35177213
Alignment:
Q  198 tttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||| ||||||||||  ||||| ||| |||| || |||||||||||| ||| || | ||||||||| | ||||||||||||||||||| |||||    
T  35177306 tttatgtttttaggtaccaaaatcgtgttaattcagaggtaaactcgatttctgataaaatcggaaggattgacgagtttgaccgagttaacac 35177213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 286
Target Start/End: Original strand, 3593265 - 3593359
Alignment:
Q  192 tccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtg 286  Q
    ||||||||||  |||||||||  ||||| ||| |||||||||||||||| ||| ||| |  | ||||||||| ||||||| ||||| ||||||||    
T  3593265 tccgagtttatatttttaggtatcaaaatcgtgttaactcggaggtaaattcgatttctaataaaatcggaaggtttgacaagtttaaccgagtg 3593359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 290
Target Start/End: Original strand, 25253513 - 25253610
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaaca 290  Q
    ||||||||| ||||||||||  ||||| ||| ||||  | |||||||| ||||||| |||| || ||||||  ||||||||||||||| |||| ||||    
T  25253513 ccgagtttatgtttttaggtaccaaaatcgtgttaatactgaggtaaattcggtttctggtaaactcggaagatttgacgagtttgactgagttaaca 25253610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 38535897 - 38535772
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    |||||||||||||||||| |   ||||  || ||||||| |||||||||| ||||| |||| |||||||||   || ||||||||||| |||| |||||     
T  38535897 ccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggtaaaatcggaagacttaacgagtttgactgagttaacact 38535798  T
Q  293 tgttaaactcg-gtaaactcgtccga 317  Q
     | |||||||| ||||||||| ||||    
T  38535797 cggtaaactcgtgtaaactcgaccga 38535772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 38558115 - 38557990
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    |||||||||||||||||| |   ||||  || ||||||| |||||||||| ||||| |||| |||||||||   || ||||||||||| |||| |||||     
T  38558115 ccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggtaaaatcggaagacttaacgagtttgactgagttaacact 38558016  T
Q  293 tgttaaactcg-gtaaactcgtccga 317  Q
     | |||||||| ||||||||| ||||    
T  38558015 cggtaaactcgtgtaaactcgaccga 38557990  T

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Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 40706173 - 40706274
Alignment:
Q  165 caaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaa 264  Q
    ||||||||||||||| || |||| |||||||||||| | |||||||||  ||||| ||| | ||||||||  |||||||  |||||||| |||| | |||    
T  40706173 caaatcgagtgttaatacataaattcgtccgagttt-catttttaggtatcaaaatcgtgtaaactcggacataaactcattttttggtaaaattgaaaa 40706271  T
Q  265 gtt 267  Q
    |||    
T  40706272 gtt 40706274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 8140983 - 8140886
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||||||||||   |||| ||| ||||||| |||||||| ||| ||| |||| ||||  ||| |||| | ||||||||| |||| |||||    
T  8140983 cgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggtaaaattagaaggtttaatgagtttgactgagttaacac 8140886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 42638088 - 42638016
Alignment:
Q  239 aactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcg 312  Q
    ||||||||||||| ||||||| ||| |||||| |||||||||||| | |||| ||||| || | ||||||||||    
T  42638088 aactcggtttttg-tgaaatcagaatgtttgatgagtttgaccgacttaacatgtgtttaatttggtaaactcg 42638016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 49453159 - 49453063
Alignment:
Q  196 agtttacgtttttaggtggcaaaaa-cgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||| || |||||||  |||||| ||| ||||||| |||||||||||| ||| |||  |||||  || ||||||| ||||||||||||| |||||    
T  49453159 agtttatgtgtttaggtaccaaaaatcgtgttaactctgaggtaaactcgatttctggaaaaatcataaggtttgacaagtttgaccgagttaacac 49453063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 5e-78; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 158 - 329
Target Start/End: Complemental strand, 8779717 - 8779546
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8779717 tgtttcacaaatcgagtgttaactcgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaa 8779618  T
Q  258 tcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgtccgagtttacctttga 329  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  8779617 tcggaaagtttgacgagtttgaccaagttaactcgtgttaaactcggtaaactcgtccgagtttacctttga 8779546  T

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Target: chr6; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 163 - 313
Target Start/End: Complemental strand, 31996379 - 31996229
Alignment:
Q  163 cacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcgga 262  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  31996379 cacaaatcgagtgttaacacgcaaactcgctcgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcgga 31996280  T
Q  263 aagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31996279 aagtttgacgagtttgaccgagttaacacgtgttaaactcggtaaactcgt 31996229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 154 - 313
Target Start/End: Complemental strand, 7835504 - 7835354
Alignment:
Q  154 tcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  7835504 tcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtgttaagtcggaggtaaactcggtttttggt 7835405  T
Q  254 gaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    ||||||||||||||         ||||||||| |||||||||||||||||||||||||||    
T  7835404 gaaatcggaaagtt---------tgaccgagttaacacgtgttaaactcggtaaactcgt 7835354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 153 - 313
Target Start/End: Original strand, 21199513 - 21199673
Alignment:
Q  153 atcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttgg 252  Q
    |||||||||||||||||||||||||||| |||||||| | |  |||||||||||||||||||||||| ||| |||||||  ||||||||||| |||||||    
T  21199513 atcactgttccacaaatcgagtgttaactcgtaaacttgccaaagtttacgtttttaggtggcaaaaccgtgttaactccaaggtaaactcgatttttgg 21199612  T
Q  253 tgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  21199613 tgaaatcggaaagtttgacgagtttgaccgagttaacatgtgttaaactcggtaaactcgt 21199673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 160 - 323
Target Start/End: Original strand, 12028941 - 12029105
Alignment:
Q  160 ttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatc 259  Q
    ||||||||||||||||||||| | |||||| ||  || |||| ||||||||| | ||||||||| ||||||  |||||||||||| |||||  |||||||    
T  12028941 ttccacaaatcgagtgttaactcataaacttgtttgactttatgtttttaggggtcaaaaacgtgttaactttgaggtaaactcgatttttattgaaatc 12029040  T
Q  260 ggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcgtccgagtttac 323  Q
    | || ||||||||||||||||  ||| ||||||| ||||||||| ||||||||| ||||||||||    
T  12029041 gaaatgtttgacgagtttgacatagttaacacgtattaaactcgtgtaaactcgaccgagtttac 12029105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 1463772 - 1463674
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||    
T  1463772 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacac 1463674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 6788099 - 6788197
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||    
T  6788099 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacac 6788197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 10113881 - 10113789
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagt 285  Q
    |||||||||||| |||||||   |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  10113881 ccgagtttacgtgtttaggtcctaaaaacgtgttaactcggaggtaaactcgttttttggtaaaatcggaaagtttgacgagtttgaccgagt 10113789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 312
Target Start/End: Complemental strand, 21011013 - 21010859
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    ||||||| ||||||| |||||||  ||||||||||  |||||| | ||||||||||  ||| |||| |||| ||| |||| |||||||||||||||||||    
T  21011013 tgttccataaatcgaatgttaactagtaaactcgtttgagtttgcatttttaggtgttaaatacgtgttaattcgaaggtcaactcggtttttggtgaaa 21010914  T
Q  258 tcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcg 312  Q
    ||  || ||||||||||||| ||||||| || |||||| ||||||| ||||||||    
T  21010913 tcaaaatgtttgacgagtttaaccgagttaatacgtgtaaaactcgttaaactcg 21010859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 13461374 - 13461459
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    ||||||||||||||| ||  ||||| ||| | ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  13461374 gagtttacgtttttatgtatcaaaatcgtgtcaactcggaggtaaactcggtttttggtaaaatcagaatgtttgacgagtttgac 13461459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 31975751 - 31975661
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagt 285  Q
    ||||||| || |||||||  ||||| ||| ||||||| |||||||||||| ||| | || ||||||||| |||||||||||||||||||||    
T  31975751 gagtttatgtgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttcttgtaaaatcggaaggtttgacgagtttgaccgagt 31975661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 3000244 - 3000337
Alignment:
Q  198 tttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||| |||||||  ||||| ||| ||||||||| |||||| ||| ||| |||| ||||||| ||||||||||||||||| ||||| |||||    
T  3000244 tttacgtgtttaggtaccaaaatcgtgttaactcgggggtaaattcgatttatggtaaaatcgggaagtttgacgagtttgatcgagttaacac 3000337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 322
Target Start/End: Original strand, 16438706 - 16438835
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgt 293  Q
    |||||||||||||||||||   |||| ||| |||||| |||||||||||||  || |||| ||||||||| ||||||||||||| | ||||| | |||      
T  16438706 cgagtttacgtttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaaaatcggaaggtttgacgagtttaatcgagttagcactc 16438805  T
Q  294 gttaaactcg-gtaaactcgtccgagttta 322  Q
    | |||||||| |||||||||  ||||||||    
T  16438806 ggtaaactcgtgtaaactcgatcgagttta 16438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 2606896 - 2606992
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||| ||||||   ||||| ||| ||||||| |||||||||||| ||| |||| ||||| ||| |||||| |||||||||||||| |||||    
T  2606896 gagtttacgtgtttaggcaccaaaatcgttttaactctgaggtaaactcgatttctggtaaaatcagaaggtttgatgagtttgaccgagttaacac 2606992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 308
Target Start/End: Complemental strand, 15381641 - 15381497
Alignment:
Q  165 caaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcg-gaggtaaactcggtttttggtgaaatcggaa 263  Q
    ||||||||||||||| |||||||||||  | |||||||||||||||||| ||||  ||||| || | | |||||||||||| |||||| | |||| ||||    
T  15381641 caaatcgagtgttaaaacgtaaactcgatcaagtttacgtttttaggtgtcaaagtcgtataaatttgagaggtaaactcgttttttgataaaattggaa 15381542  T
Q  264 agtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaa 308  Q
    ||||   ||||||| ||||| | | ||||  ||||| ||||||||    
T  15381541 agttgatcgagtttaaccgaattagcacggcttaaaatcggtaaa 15381497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 7497548 - 7497631
Alignment:
Q  196 agtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttga 279  Q
    |||||||||||||||||   |||| ||| ||||||| |||||||||||||||| |||| |||| |||| |||| ||||||||||    
T  7497548 agtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaattggaaggtttaacgagtttga 7497631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 285
Target Start/End: Complemental strand, 31535160 - 31535069
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagt 285  Q
    ||||||||| |||||||||  |||||  || ||||||| |||| ||||||| ||| |||| |||||| || |||||||||||||||||||||    
T  31535160 cgagtttacatttttaggtatcaaaattgtgttaactctgaggcaaactcgatttctggtaaaatcgaaaggtttgacgagtttgaccgagt 31535069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 31067880 - 31067977
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  31067880 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 31067977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 28900940 - 28900863
Alignment:
Q  192 tccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttg 269  Q
    ||||||||||| | |||||||  ||||| ||| ||||||| |||||||||||| ||| |||| ||||||||| |||||    
T  28900940 tccgagtttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaaggtttg 28900863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 31896085 - 31896182
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||| ||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  31896085 cgagtatacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 31896182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 14262187 - 14262092
Alignment:
Q  196 agtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||| |||||||||   |||| ||| ||||||| |||||||| ||| ||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  14262187 agtttacttttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggtaaaattggaaggtttaacgagtttgactgagttaacac 14262092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 34758830 - 34758735
Alignment:
Q  196 agtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||||||||   |||| ||| ||||||| |||||||| ||||||| || | |||| |||| |||| || |||||||| |||| |||||    
T  34758830 agtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgataaaattggaaggtttaacaagtttgactgagttaacac 34758735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 4200173 - 4200107
Alignment:
Q  225 ttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  4200173 ttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 4200107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 24194463 - 24194511
Alignment:
Q  244 ggtttttggtgaaatcggaaagtttgacgagt-ttgaccgagtgaacac 291  Q
    |||||||||| |||| |||||||||||||||| |||||||||| |||||    
T  24194463 ggtttttggtaaaattggaaagtttgacgagtattgaccgagttaacac 24194511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 7e-77; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 155 - 329
Target Start/End: Complemental strand, 6487460 - 6487284
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  6487460 cactgatccacaaatcgagtgttaacacgtaaacttgcccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtg 6487361  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg--gtaaactcgtccgagtttacctttga 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  6487360 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggagtaaactcgtccgagtttacctttga 6487284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 160 - 313
Target Start/End: Original strand, 51967243 - 51967396
Alignment:
Q  160 ttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatc 259  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  51967243 ttccacaaatcgagtgttaacacgtaaactcgttcgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatc 51967342  T
Q  260 ggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    | |||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  51967343 gaaaagtttgacgagtttgaccgagttaacacgtgttaaattcggtaaactcgt 51967396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 40162750 - 40162925
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | || |||||| ||||||||||||| ||||    
T  40162750 cactgttccacaaatcgagtgttaactcgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtgtaaattcggagataaactcggttttcggtg 40162849  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg--gtaaactcgtccgagtttacctttga 329  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||| ||||||||||||||||||    
T  40162850 aaatcggaaagtttgacgagtttgaccgagttaacacgtg-taaactcggagtaaactagtccgagtttacctttga 40162925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 157 - 329
Target Start/End: Original strand, 9972736 - 9972910
Alignment:
Q  157 ctgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaa 256  Q
    |||||||||||||||||| ||||| |||||| |||  |||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  9972736 ctgttccacaaatcgagtattaactcgtaaattcgctcgagtttatgtttttaggtggcaaaaacgtgtaaactcggaggtaaactcggtttttggtgaa 9972835  T
Q  257 atcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcgg--taaactcgtccgagtttacctttga 329  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |  |||||||||||||||||||||||||    
T  9972836 atcggaaagtttgacgagtttgaccgagttaacacgtgttaaactcagaataaactcgtccgagtttacctttga 9972910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 155 - 311
Target Start/End: Complemental strand, 56424117 - 56423961
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  56424117 cactgttccacaaagcgaatgttaacacgtaaactcgcccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttagtg 56424018  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactc 311  Q
    |||||||||||||||| |||||||||| ||| |||| ||||||||||||||||||||    
T  56424017 aaatcggaaagtttgatgagtttgaccaagttaacatgtgttaaactcggtaaactc 56423961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 155 - 311
Target Start/End: Original strand, 26448592 - 26448748
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||| | | ||||||||||||||||   |||||||||    
T  26448592 cactgttccacaaatcgagtgttaactcgtaaactcgctcgagtttacatttttaggtggcaaaaacatgtaaactcggaggtaaacttaatttttggtg 26448691  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactc 311  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  26448692 aaatcggaaagtttgacgagtttgaccgagttaacacgcgttaaactcggtaaactc 26448748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 156 - 329
Target Start/End: Complemental strand, 29966523 - 29966362
Alignment:
Q  156 actgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtga 255  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||            ||||||||||||||||||||    
T  29966523 actgttccacaaatcgagtgttaactcgtaaactcgcccgagtttacgtttttaggtggcaaaaacgt------------gtaaactcggtttttggtga 29966436  T
Q  256 aatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgtccgagtttacctttga 329  Q
    ||||| |||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  29966435 aatcgaaaagttcgacgagtttgaccgagttaacatgtgttaaactcggtaaactcgtccgagtttacctttga 29966362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 158 - 312
Target Start/End: Complemental strand, 8563497 - 8563342
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    |||||||||||||||||||||||  |||||||||  ||||||||||||||||| || ||||||||| ||||||||||| ||||||||||||||| |||||    
T  8563497 tgttccacaaatcgagtgttaacttgtaaactcgcacgagtttacgtttttagatgacaaaaacgtgttaactcggagataaactcggtttttgatgaaa 8563398  T
Q  258 tcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcg 312  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  8563397 tcggaaagtttgacgagtttgaccgagttaacacgtgttaaactcgtgtaaactcg 8563342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 186 - 313
Target Start/End: Original strand, 54561211 - 54561338
Alignment:
Q  186 aactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagt 285  Q
    |||||| |||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  54561211 aactcgcccgagtttacatttttaggtggcaaaaacatgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgtgtttgaccgagt 54561310  T
Q  286 gaacacgtgttaaactcggtaaactcgt 313  Q
     |||||||||||||||||||||||||||    
T  54561311 taacacgtgttaaactcggtaaactcgt 54561338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 155 - 294
Target Start/End: Original strand, 21486476 - 21486615
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| | |||||| ||||||||||||||||||| |    
T  21486476 cactgttccacaaatcgagtgttaactcgtaaactcgttcgagtttacgtttttaggtggcaaaaccgtgtaaactcgaaggtaaactcggtttttggag 21486575  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtg 294  Q
    ||||| ||||||||||||||||||||| ||  ||||||||    
T  21486576 aaatcagaaagtttgacgagtttgacctaggtaacacgtg 21486615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 23170842 - 23170715
Alignment:
Q  186 aactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagt 285  Q
    |||||| || ||||||||||||||||||||||||| || |||| ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  23170842 aactcgcccaagtttacgtttttaggtggcaaaaatgtgttaattcggaggtaatttcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagt 23170743  T
Q  286 gaacacgtgttaaactcggtaaactcgt 313  Q
     |||| |||||||||||| |||||||||    
T  23170742 taacatgtgttaaactcgataaactcgt 23170715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 155 - 270
Target Start/End: Original strand, 25013407 - 25013522
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||||||  |||||  ||    
T  25013407 cactgttccacaaatcgagtgttaacacgtaaactcgttcgagtttacgtttttaggtggcaaaaacatgttaactcggagctaaactcaatttttaatg 25013506  T
Q  255 aaatcggaaagtttga 270  Q
    ||||||||||||||||    
T  25013507 aaatcggaaagtttga 25013522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 327
Target Start/End: Complemental strand, 40487801 - 40487632
Alignment:
Q  154 tcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggt 253  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  40487801 tcactgttccacaaatcgagtgttaactcgtaaactc-tctgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttgg- 40487704  T
Q  254 gaaatcggaaagtttgacgagtttgaccgag-tgaacacgtgttaaactcg--gtaaactcgtccgagtttaccttt 327  Q
        | | |||||||||||||||||  || | | ||| |||| ||||||||  ||||||||||||||||||||||||    
T  40487703 ----ttgaaaagtttgacgagtttgttcgtgttaaactcgtg-taaactcggagtaaactcgtccgagtttaccttt 40487632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 3860326 - 3860230
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttg 251  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  3860326 cactgtttcacaaatcgagtgttaacacgtaaactcgttcgagtttacgtttttatgtggcaaaaacgtgttaactcggaggtaaactcggtttttg 3860230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 3869083 - 3868987
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttg 251  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  3869083 cactgtttcacaaatcgagtgttaacacgtaaactcgttcgagtttacgtttttatgtggcaaaaacgtgttaactcggaggtaaactcggtttttg 3868987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 41470424 - 41470319
Alignment:
Q  199 ttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaa 298  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||         ||||||||| ||||||||||||    
T  41470424 ttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaattggaaagtt---------tgaccgagttaacacgtgttaa 41470334  T
Q  299 actcggtaaactcgt 313  Q
    |||||||||||||||    
T  41470333 actcggtaaactcgt 41470319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 29469162 - 29469260
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||    
T  29469162 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacac 29469260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 158 - 313
Target Start/End: Complemental strand, 21306444 - 21306289
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    ||||||||||||  ||||||||| |||||| |||||  ||||||| ||| |||||| ||||||||| ||||||| || |||||  ||  |||| ||||||    
T  21306444 tgttccacaaataaagtgttaactcgtaaattcgtcgtagtttacatttgtaggtgccaaaaacgtgttaactcagaagtaaatccgagttttagtgaaa 21306345  T
Q  258 tcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    || ||||||||||||| ||||  ||||| |||||||||||||||||||||| ||||    
T  21306344 tcagaaagtttgacgaatttggtcgagttaacacgtgttaaactcggtaaagtcgt 21306289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 8084208 - 8084306
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| | || ||||||||||||||||||||||||||||||| |||||    
T  8084208 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 8084306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 192 - 324
Target Start/End: Complemental strand, 24966624 - 24966491
Alignment:
Q  192 tccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||| |||||||  ||||| ||| |||||||||| ||||| |||||||||||| |||| |||| ||||| ||||||||||| ||| |||||    
T  24966624 tccgagtttacgtgtttaggtaccaaaatcgtgttaactcggaagtaaattcggtttttggtaaaatgggaaggtttgccgagtttgaccaagttaacac 24966525  T
Q  292 gtgttaaactcg-gtaaactcgtccgagtttacc 324  Q
     || |||||||| ||||||||| |||||||||||    
T  24966524 ttggtaaactcgtgtaaactcgaccgagtttacc 24966491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 42937513 - 42937417
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||| ||||||||  |||| ||| |||||||||||||||||||| ||| |||| |||||| |||||||||||||||||||||||| |||||    
T  42937513 gagtttacgtatttaggtgctaaaagcgttttaactcggaggtaaactcgatttctggtaaaatcgaaaagtttgacgagtttgaccgagttaacac 42937417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 292
Target Start/End: Original strand, 14334366 - 14334492
Alignment:
Q  166 aaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaag 265  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||||  ||||| ||  | |||||||| ||||||| | |||||||| |||||||||||    
T  14334366 aaatcgagtgttaaaacgtaaacttgcccgagtttacgtttttaggtaccaaaatcgcgtaaactcggacgtaaacttgttttttggtaaaatcggaaag 14334465  T
Q  266 tttgacgagtttgaccgagtgaacacg 292  Q
    ||   | ||||||||||||| ||||||    
T  14334466 ttgacctagtttgaccgagttaacacg 14334492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 192 - 324
Target Start/End: Original strand, 50517191 - 50517324
Alignment:
Q  192 tccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||| |||||||  ||||| ||| ||||||  |||||||||||| ||| |||| |||| |||| ||||||||||||||||||||| |||||    
T  50517191 tccgagtttacgtgtttaggtaccaaaatcgtgttaactttgaggtaaactcgatttctggtaaaattggaaggtttgacgagtttgaccgagttaacac 50517290  T
Q  292 gtgttaaactcg-gtaaactcgtccgagtttacc 324  Q
      | |||||||| ||||||||| |||| ||||||    
T  50517291 tcggtaaactcgtgtaaactcgaccgattttacc 50517324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 49501286 - 49501166
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    ||||||||||||||||||||   |||| ||| ||||||| |||||||||||||||| |||| ||||||||| |||| ||||||||||| |||| |||||     
T  49501286 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcggaaggtttaacgagtttgacggagttaacact 49501187  T
Q  293 tgttaaactcg-gtaaactcg 312  Q
     | |||||||| |||||||||    
T  49501186 cggtaaactcgtgtaaactcg 49501166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 49507351 - 49507231
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    ||||||||||||||||||||   |||| ||| ||||||| |||||||||||||||| |||| ||||||||| |||| ||||||||||| |||| |||||     
T  49507351 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcggaaggtttaacgagtttgacggagttaacact 49507252  T
Q  293 tgttaaactcg-gtaaactcg 312  Q
     | |||||||| |||||||||    
T  49507251 cggtaaactcgtgtaaactcg 49507231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 279
Target Start/End: Complemental strand, 23671473 - 23671392
Alignment:
Q  198 tttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttga 279  Q
    ||||||| |||||||  ||||| ||| |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  23671473 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcgaaaagtttgacgagtttga 23671392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 308
Target Start/End: Complemental strand, 25843132 - 25842986
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    |||| |||||||||||| ||||   |||||||||||||| ||||   ||||| ||||||||||| | ||||||     ||||| ||||||| ||||||||    
T  25843132 tgtttcacaaatcgagtattaatttgtaaactcgtccgaatttatacttttacgtggcaaaaacatgttaact----tgtaaattcggtttatggtgaaa 25843037  T
Q  258 tcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaa 308  Q
    || |||||||||| ||| |||||||||| ||||  ||||||||| ||||||    
T  25843036 tcagaaagtttgaagagattgaccgagttaacatatgttaaacttggtaaa 25842986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 49834587 - 49834462
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    |||||||||||||||||| |   |||| ||| ||||||| |||||||||||||||| |||| ||||||||| |||| ||||||||||| |||| || ||     
T  49834587 ccgagtttacgtttttagctacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaatact 49834488  T
Q  293 tgttaaactcg-gtaaactcgtccga 317  Q
     | |||||||| ||||||||| ||||    
T  49834487 cggtaaactcgtgtaaactcgaccga 49834462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 280
Target Start/End: Original strand, 871776 - 871895
Alignment:
Q  160 ttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatc 259  Q
    ||||| ||||||||||||||| |||  | |   ||||||||||||||||||||  ||||  ||| | |||||||||||||||||| ||| |||| |||||    
T  871776 ttccataaatcgagtgttaactcgtcgagtttaccgagtttacgtttttaggtaccaaat-cgtgtcaactcggaggtaaactcgatttctggtaaaatc 871874  T
Q  260 ggaaagtttgacgagtttgac 280  Q
    |||| ||||||||||||||||    
T  871875 ggaatgtttgacgagtttgac 871895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 303
Target Start/End: Complemental strand, 26491225 - 26491117
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtg 294  Q
    |||||||||| |||||||  ||||| ||| |||| |  |||||||||||||||| |||| ||||| ||| ||||||||||||||||||||| ||||  ||    
T  26491225 gagtttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaactcggtttctggtaaaatcagaaggtttgacgagtttgaccgagttaacatttg 26491126  T
Q  295 ttaaactcg 303  Q
     ||||||||    
T  26491125 gtaaactcg 26491117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 321
Target Start/End: Original strand, 26955301 - 26955464
Alignment:
Q  165 caaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggttttt------ggtgaaat 258  Q
    ||||||||||||||| ||||||||| | |||| |||||||||||||||  ||||| ||| | || ||  ||||||| ||| |||||      ||| ||||    
T  26955301 caaatcgagtgttaaaacgtaaacttgcccgaatttacgtttttaggtttcaaaatcgtgtaaattcaaaggtaaattcgttttttttttttggtaaaat 26955400  T
Q  259 cggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcgg-taaactcgtccgagttt 321  Q
    || |||||||| ||||||||||||||| ||||||  ||||| |||| ||||||||| |||||||    
T  26955401 cgaaaagtttgtcgagtttgaccgagttaacacggcttaaaatcggataaactcgttcgagttt 26955464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 28484343 - 28484469
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaa--cgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaaca 290  Q
    ||||||||||||||||||||  ||||||  ||| ||||||| |||||||||||||||| |||| |||| |||| |||| ||||||||||| |||| ||||    
T  28484343 ccgagtttacgtttttaggta-caaaaagtcgtgttaactctgaggtaaactcggtttctggtaaaattggaaggtttaacgagtttgactgagttaaca 28484441  T
Q  291 cgtgttaaactcg-gtaaactcgtccga 317  Q
    |  | |||||||| ||||||||| ||||    
T  28484442 ctcgataaactcgtgtaaactcgaccga 28484469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 33138798 - 33138877
Alignment:
Q  192 tccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 271  Q
    ||||||||||||| |||||||  ||||| ||| |||||||||||||||||||| ||| |||| ||||||||| |||||||    
T  33138798 tccgagtttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaaggtttgac 33138877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 41725564 - 41725659
Alignment:
Q  196 agtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||||||||   |||| ||| ||||||| |||||||||||| ||| |||| ||||||||| |||| ||||||||||| |||| |||||    
T  41725564 agtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaaggtttaacgagtttgactgagttaacac 41725659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 291
Target Start/End: Original strand, 46286707 - 46286806
Alignment:
Q  192 tccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||||||||||||  ||||| ||| ||||| |  ||||||||||| ||| | || || |||||| ||||||||||||||||||||| |||||    
T  46286707 tccgagtttacgtttttaggtaccaaaatcgtgttaacactaaggtaaactcgatttctagtaaactcggaaggtttgacgagtttgaccgagttaacac 46286806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 280
Target Start/End: Original strand, 55165489 - 55165611
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    |||||||||||||||||| |||| |||  | |   | ||||||||||||||| ||  ||||| |||||||||| ||||||||||| | ||| |||| |||    
T  55165489 tgttccacaaatcgagtgctaactcgtcgagtttactgagtttacgtttttacgtaccaaaatcgtattaacttggaggtaaacttgatttatggtaaaa 55165588  T
Q  258 tcggaaagtttgacgagtttgac 280  Q
    || ||| ||||||||||||||||    
T  55165589 tcagaatgtttgacgagtttgac 55165611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 22479852 - 22479937
Alignment:
Q  227 aactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcg 312  Q
    |||||||| ||||| ||| |||||| ||||||||||| ||||||| ||||||| ||||| |||| ||| |||||| ||||||||||    
T  22479852 aactcggatgtaaaatcgttttttgttgaaatcggaatgtttgacaagtttgagcgagttaacatgtggtaaacttggtaaactcg 22479937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 29510169 - 29510072
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||| |||||||  ||||| ||| ||||||| || ||||||||  ||| |||| ||||| ||| ||||||||||||||||||||| |||||    
T  29510169 cgagtttacgtgtttaggtatcaaaatcgtgttaactctgatgtaaactcaatttctggtaaaatcagaaggtttgacgagtttgaccgagttaacac 29510072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 29855964 - 29856089
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    ||||||||||||||||| ||   |||| ||| ||||||| |||||||||||| ||| |||| |||| |||| |||| ||||||||||| |||| |||||     
T  29855964 ccgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcgatttctggtaaaattggaaggtttaacgagtttgactgagttaacact 29856063  T
Q  293 tgttaaactcg-gtaaactcgtccga 317  Q
     | |||||||| ||||||||| ||||    
T  29856064 cggtaaactcgtgtaaactcgaccga 29856089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 32322514 - 32322606
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagt 285  Q
    ||||||||||||||||||||   |||| ||| |||| || |||||||||||||||| |||| ||||||||| | || ||||||||||| ||||    
T  32322514 ccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcggtttctggtaaaatcggaaggcttaacgagtttgactgagt 32322606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 5441851 - 5441948
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  5441851 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 5441948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 5800413 - 5800537
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgt 293  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| | ||| ||| |||| ||||||||||| |||| |||||      
T  5800413 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttctggtaacatcagaaggtttaacgagtttgactgagttaacactc 5800512  T
Q  294 gttaaactcg-gtaaactcgtccga 317  Q
    | |||||||| ||||||||| ||||    
T  5800513 gataaactcgtgtaaactcgaccga 5800537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 290
Target Start/End: Original strand, 27768513 - 27768609
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaaca 290  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| ||||    
T  27768513 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaaca 27768609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 23987645 - 23987742
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||   |||| ||| ||||||| |||||||| | ||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  23987645 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaa-ttggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 23987742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 37828182 - 37828085
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| ||||||| |   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  37828182 cgagtttacatttttagatacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 37828085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 48261527 - 48261624
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||| || |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  48261527 cgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 48261624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 40317657 - 40317593
Alignment:
Q  237 taaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaact 301  Q
    ||||||||||||||| ||||||| ||| ||||||| ||||||| | ||| ||||| |||||||||    
T  40317657 taaactcggtttttgatgaaatcagaacgtttgactagtttgatctagttaacacatgttaaact 40317593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 40327731 - 40327667
Alignment:
Q  237 taaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaact 301  Q
    ||||||||||||||| ||||||| ||| ||||||| ||||||| | ||| ||||| |||||||||    
T  40327731 taaactcggtttttgatgaaatcagaacgtttgactagtttgatctagttaacacatgttaaact 40327667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 280
Target Start/End: Complemental strand, 30967096 - 30967009
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    ||||||||||||||||||||   |||| ||| ||||||| ||| |||| | ||||| |||| |||| |||| |||| |||||||||||    
T  30967096 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgagataaaattggtttctggtaaaattggaaggtttaacgagtttgac 30967009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 2326801 - 2326716
Alignment:
Q  158 tgttccacaaatc-gagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaact 242  Q
    |||| |||||||| ||||||||| ||||||||||| | || |||||||||||||||  ||||| ||| | |||| ||| |||||||    
T  2326801 tgtttcacaaatccgagtgttaaaacgtaaactcgcctgaatttacgtttttaggtaccaaaatcgtgtaaacttggatgtaaact 2326716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 54341591 - 54341688
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| | ||||| |||||||| ||||||| |||| |||| | || |||| ||||||||||| |||| |||||    
T  54341591 cgagtttacatttttaggtacaaaaatcgtgtaaactctgaggtaaaatcggtttctggtaaaattgaaaggtttaacgagtttgactgagttaacac 54341688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 32889895 - 32889979
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagttt 277  Q
    |||||||||||| |||||||  ||||| ||| ||||||  || ||||||||  ||| |||| ||||| ||| |||||||||||||    
T  32889895 ccgagtttacgtgtttaggtaccaaaatcgtgttaactttgatgtaaactcaatttctggtaaaatcagaaggtttgacgagttt 32889979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 37916283 - 37916335
Alignment:
Q  239 aactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||| |||| ||||||||| |||| ||||||||||| |||| |||||    
T  37916283 aactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaacac 37916335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 1e-72; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 155 - 313
Target Start/End: Complemental strand, 14732434 - 14732276
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  14732434 cactgttccacaaatcgagtgttaacacgtaaactcgctcaagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaacttggtttttggtg 14732335  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14732334 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 14732276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 154 - 329
Target Start/End: Original strand, 35313517 - 35313694
Alignment:
Q  154 tcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggt 253  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||| |||||||||||||||| ||||||||||||    
T  35313517 tcactgttccacaaatcgagtgttaacacgtaaactcgcccgagtttacgtttttagatggcaaaaccgtgttaactcggaggtaaattcggtttttggt 35313616  T
Q  254 gaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg--gtaaactcgtccgagtttacctttga 329  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||    
T  35313617 gaaatcggaaagtttgatgagtttgaccgagttaacacgtgttaaactcggagtaaactcgtctgagtttacctttga 35313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 21024027 - 21024202
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  21024027 cactgtttcacaaatcgagtgttaacacgtaaattcgcccgagtttacgattttaggtgacaaaaacgtgttaactcgaaggtaaactcggtttttggtg 21024126  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcgtccgagtttacctttga 329  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||    
T  21024127 aaatcggaaagtttgacgagtttgaccgagttaacacgtgttaaactcgtgtaaacttgtccgagtttacctttga 21024202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 155 - 310
Target Start/End: Original strand, 19594172 - 19594326
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||||||||||||| |||||||| ||| | |||| |||| ||||||||||||||||||    
T  19594172 cactgttccacaaatcgagttttaactcgtaaactcgcccgagtttacgtttttagatggcaaaa-cgtgtaaactaggagataaactcggtttttggtg 19594270  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaact 310  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19594271 aaatcggaaagtttgacgagtttgaccgagttaacacgtgttaaactcggtaaact 19594326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 163 - 313
Target Start/End: Original strand, 34656574 - 34656724
Alignment:
Q  163 cacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcgga 262  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||||||| |||||||| | || ||||| ||||| ||||||||||||||||||| |    
T  34656574 cacaaatcgagtgttaactcgtgtactcgtccgagtttacgtttttaggtggtaaaaacgtgtaaattcggaagtaaattcggtttttggtgaaatcgaa 34656673  T
Q  263 aagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34656674 aagtttgacgagtttgaccgagttaacacgtgttaaactcggtaaactcgt 34656724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 38910442 - 38910618
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||||||||||| ||||||||| |||||  ||  |||| ||||||||||||| |||||| ||||| | |||||| |||||| ||||||||||||||    
T  38910442 cactgttccacaaatcaagtgttaactcgtaagttcacccgaatttacgtttttagatggcaagaacgtgtaaactcgaaggtaagctcggtttttggtg 38910541  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg--gtaaactcgtccgagtttacctttga 329  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||  |||||||||| |||||||||||||||    
T  38910542 aaatcggaaagtttgacgagattgaccgagttaacacgtgttaaactcggagtaaactcgttcgagtttacctttga 38910618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 167 - 329
Target Start/End: Complemental strand, 37392751 - 37392598
Alignment:
Q  167 aatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagt 266  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||| | | ||||||||| |||||| | |||||||||||||| |||       
T  37392751 aatcgagtgttaactcgtaaattcgtccgagtttacgtttttaggtggcaaaaacatgtaaactcggagataaacttgatttttggtgaaatcagaa--- 37392655  T
Q  267 ttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgtccgagtttacctttga 329  Q
          ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37392654 ------agtttgatcgagttaacacgtgttaaactcggtaaactcgtccgagtttacctttga 37392598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 170 - 301
Target Start/End: Complemental strand, 1254592 - 1254461
Alignment:
Q  170 cgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttg 269  Q
    |||| |||||| |||||||||| | ||||||||| ||||||||| ||||||  | |||| ||| ||||||||||| |||||||||||||||||  |||||    
T  1254592 cgagagttaactcgtaaactcgcctgagtttacgattttaggtgtcaaaaattttttaaatcgaaggtaaactcgatttttggtgaaatcggactgtttg 1254493  T
Q  270 acgagtttgaccgagtgaacacgtgttaaact 301  Q
    | |||||||||||||| |||||||||||||||    
T  1254492 atgagtttgaccgagttaacacgtgttaaact 1254461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 14741425 - 14741523
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| | || ||||||||||||||||||||||||||||||| |||||    
T  14741425 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 14741523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 206 - 299
Target Start/End: Original strand, 6268513 - 6268606
Alignment:
Q  206 tttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaa 299  Q
    |||||||| ||||||||| |||||||||| ||||||| |||||||||||||||  ||| ||||||||||||||||||||| |||||||||||||    
T  6268513 tttaggtgtcaaaaacgtgttaactcggatgtaaactaggtttttggtgaaattagaatgtttgacgagtttgaccgagttaacacgtgttaaa 6268606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 4639975 - 4639877
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||  ||| |||| |||||||||| |||||||||||||||||||| |||||    
T  4639975 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactctatttctggtaaaatcggaaattttgacgagtttgaccgagttaacac 4639877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 12740816 - 12740903
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    ||||||||||||||||||||  ||||| ||| ||||||| |||||||||||||| | |||| |||| |||| ||||||||||||||||    
T  12740816 ccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtgtctggtaaaattggaaggtttgacgagtttgac 12740903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 48136987 - 48136889
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||  ||||| ||| ||||||| ||||||||||| |||| |||| ||||  ||| |||||||||||||||| |||| |||||    
T  48136987 ccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcagtttctggtaaaattagaaggtttgacgagtttgactgagttaacac 48136889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 280
Target Start/End: Complemental strand, 11735289 - 11735204
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    ||||||||| ||||||||  ||||| ||| |||||||||||||||||||| ||| |||| ||||||||| ||||| ||||||||||    
T  11735289 gagtttacgattttaggtcccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaatgtttgccgagtttgac 11735204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 37972636 - 37972511
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    ||||||||||||||||||||  ||||| ||| ||||||| ||| ||||||| |||| |||| ||||||||| |||| |||| |||||| |||| | |||     
T  37972636 ccgagtttacgtttttaggtaccaaaatcgtgttaactctgagataaactcagtttctggtaaaatcggaaggtttaacgaatttgactgagttagcact 37972537  T
Q  293 tgttaaactcg-gtaaactcgtccga 317  Q
    || |||||||| ||||||||| ||||    
T  37972536 tggtaaactcgtgtaaactcgaccga 37972511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 8675777 - 8675903
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggt-gaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||| ||||||||||||  ||||| ||| |||||||  ||||||||||||||| ||||  |||||| || |||||||||||||||| |||| |||||    
T  8675777 ccgagttaacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcggtttctggtaaaaatcgaaaggtttgacgagtttgactgagttaacac 8675876  T
Q  292 gtgttaaactcg-gtaaactcgtccga 317  Q
      | |||||||| ||||||||| ||||    
T  8675877 tcgataaactcgtgtaaactcgaccga 8675903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 29893418 - 29893543
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    |||||||||| |||||| ||   |||| ||| ||||||| ||||||||||| |||| ||||||||||| || |||| ||||||||||| |||| |||||     
T  29893418 ccgagtttacatttttaagtacaaaaatcgtgttaactctgaggtaaactcagtttctggtgaaatcgaaaggtttaacgagtttgactgagttaacact 29893517  T
Q  293 tgttaaactcg-gtaaactcgtccga 317  Q
     | |||||||| ||||||||| ||||    
T  29893518 cggtaaactcgtgtaaactcgaccga 29893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 44121692 - 44121567
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    |||| |||||||||||||||   |||| ||| ||||||  |||||||| ||||||| |||| ||||||||| | || ||||||||||| |||| |||||     
T  44121692 ccgaatttacgtttttaggtacaaaaatcgtgttaactatgaggtaaattcggtttctggtaaaatcggaaggcttaacgagtttgactgagttaacact 44121593  T
Q  293 tgttaaactcg-gtaaactcgtccga 317  Q
    || |||||||| ||||||||| ||||    
T  44121592 tggtaaactcgtgtaaactcgaccga 44121567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 44256513 - 44256416
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||| |   |||| ||| ||||||| |||||||||||| ||| |||| ||||||||| |||| ||||||||||| |||| |||||    
T  44256513 cgagtttacgtttttagatacaaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaaggtttaacgagtttgactgagttaacac 44256416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 29585960 - 29586080
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    ||||||||||||||||||||   |||| ||| ||||||| |||||||| |||||||  ||| ||||||||| |||| | ||||||||| |||| |||||     
T  29585960 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaagtcggtttcgggtaaaatcggaaggtttaatgagtttgactgagttaacact 29586059  T
Q  293 tgttaaactcg-gtaaactcg 312  Q
     | |||||||| |||||||||    
T  29586060 cggtaaactcgtgtaaactcg 29586080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 37328354 - 37328478
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgt 293  Q
    |||||||||||||||||||   |||| ||| |||||||  ||||||||||| ||| |||| ||||||||| |||| ||| ||||||| |||| |||||      
T  37328354 cgagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaactcgatttctggtaaaatcggaaggtttaacgtgtttgactgagttaacactc 37328453  T
Q  294 gttaaactcg-gtaaactcgtccga 317  Q
    | |||||||| ||||||||| ||||    
T  37328454 ggtaaactcgtgtaaactcgaccga 37328478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 16709434 - 16709530
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||  ||||| |||  |||||| ||||||||||| |  |||||| || |||||| ||||||| ||||||||||||| |||||    
T  16709434 ccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactcag--tttggtaaactcggaaggtttgacaagtttgaccgagttaacac 16709530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 17683670 - 17683766
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||  ||||| |||  |||||| ||||||||||| |  |||||| || |||||| ||||||| ||||||||||||| |||||    
T  17683670 ccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactcag--tttggtaaactcggaaggtttgacaagtttgaccgagttaacac 17683766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 310
Target Start/End: Original strand, 31174710 - 31174825
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtg 294  Q
    |||||||| |||||||||| ||||| | | |||| ||||||||||| | | |||||| | ||||| ||| |||||||||||||||  |||| ||||||||    
T  31174710 gagtttacatttttaggtgtcaaaatcatgttaaatcggaggtaaaatagttttttgttcaaatcagaatgtttgacgagtttgagtgagttaacacgtg 31174809  T
Q  295 ttaaactcggtaaact 310  Q
     |||||| | ||||||    
T  31174810 gtaaacttgataaact 31174825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 280
Target Start/End: Original strand, 27148809 - 27148931
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    ||||||||||||||||||||||| || ||| |    |||||||||||||||||||  ||||| ||| |||| |||||||||| |||  |||  | | |||    
T  27148809 tgttccacaaatcgagtgttaactcgcaaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaaatcggaggtaacctcaatttcagctaaaa 27148908  T
Q  258 tcggaaagtttgacgagtttgac 280  Q
    || ||| ||||||||||||||||    
T  27148909 tcagaatgtttgacgagtttgac 27148931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 40460473 - 40460375
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||| ||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  40460473 ccgagtttacgcttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 40460375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 42610616 - 42610714
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||| ||||||| |||||||  ||||| ||| |||| |  |||||||||| ||||| |||| ||||| ||| ||||||||||||||||||||| |||||    
T  42610616 ccgaatttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaacttggtttctggtaaaatcagaaggtttgacgagtttgaccgagttaacac 42610714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 510093 - 510190
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  510093 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 510190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 28034607 - 28034498
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    ||||||||||||||||| ||   |||| ||| ||||||| || ||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||     
T  28034607 ccgagtttacgtttttatgtacaaaaatcgtgttaactctgatgtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacact 28034508  T
Q  293 tgttaaactc 302  Q
    || |||||||    
T  28034507 tggtaaactc 28034498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 28342758 - 28342855
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  28342758 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 28342855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 36415188 - 36415080
Alignment:
Q  160 ttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatc 259  Q
    ||||| |||||||||||||   || ||||||||  ||||||| | ||||| ||| ||||||  | ||||||||||| |||||||| ||||| ||||||||    
T  36415188 ttccataaatcgagtgtta---cgcaaactcgtttgagtttatgcttttaagtgccaaaaaattgttaactcggagataaactcgatttttagtgaaatc 36415092  T
Q  260 ggaaagtttgac 271  Q
    ||||| ||||||    
T  36415091 ggaaaatttgac 36415080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 39784554 - 39784651
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  39784554 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgacagagttaacac 39784651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 7993626 - 7993701
Alignment:
Q  216 aaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||| ||| ||||||  |||||||||||||||| |||| ||||||||| |||| ||||||||||| |||| |||||    
T  7993626 aaaatcgtgttaactatgaggtaaactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaacac 7993701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 18838856 - 18838943
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    |||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| |||||||||||    
T  18838856 ccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgac 18838943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 280
Target Start/End: Complemental strand, 26201891 - 26201804
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    |||| ||||| |||||||||  ||||| ||| | |||||||||||||||||  || ||| | ||||||||| ||||||||||||||||    
T  26201891 ccgaatttacatttttaggtaccaaaatcgtgtaaactcggaggtaaactcaattattgctaaaatcggaatgtttgacgagtttgac 26201804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 317
Target Start/End: Original strand, 41827776 - 41827899
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtg 294  Q
    ||||||||||||||||||   |||| ||| ||||||| ||||||||||| |||| |||| ||||| |||  ||| || |||||||| |||| |||||  |    
T  41827776 gagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggtaaaatcagaagatttaacaagtttgactgagttaacactcg 41827875  T
Q  295 ttaaactcg-gtaaactcgtccga 317  Q
     |||||||| ||||||||| ||||    
T  41827876 gtaaactcgtgtaaactcgaccga 41827899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 32884217 - 32884295
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 271  Q
    ||||||||||||||||||||   |||| ||  ||||||| ||||||||||| |||| |||| ||||||||| |||||||    
T  32884217 ccgagtttacgtttttaggtacaaaaatcgagttaactctgaggtaaactctgtttctggtaaaatcggaaggtttgac 32884295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 33497193 - 33497107
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    ||||||||| |||||| ||  ||||| ||| | |||||||||||||||||| ||| || | |||| |||| ||||||||||||||||    
T  33497193 cgagtttacatttttaagtatcaaaatcgtgtcaactcggaggtaaactcgatttctgataaaattggaatgtttgacgagtttgac 33497107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 29614553 - 29614456
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| | || |||| ||||||||||| |||| |||||    
T  29614553 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattgaaaggtttaacgagtttgactgagttaacac 29614456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 37915996 - 37915919
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 271  Q
    ||||||||||| ||||||||  |||| ||| ||||||| |||||||||||| ||| |||| |||||| | ||||||||    
T  37915996 cgagtttacgtgtttaggtgctaaaagcgttttaactcagaggtaaactcgatttatggtaaaatcgaacagtttgac 37915919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 33891990 - 33891895
Alignment:
Q  196 agtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||||||||   |||| ||| |||||||  ||||||| ||||||| |||| |||| |||| |||| |||| |||||| |||| |||||    
T  33891990 agtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcggtttctggtaaaattggaaggtttaacgaatttgactgagttaacac 33891895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 260
Target Start/End: Original strand, 43172153 - 43172220
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcg 260  Q
    |||||||||| |||||||||  ||||| | | |||||||||||||||||||| ||| |||| ||||||    
T  43172153 ccgagtttacatttttaggtatcaaaatcatgttaactcggaggtaaactcgatttctggtaaaatcg 43172220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 6213015 - 6213053
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtc 193  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  6213015 cactgttccacaaattgagtgttaactcgtaaactcgtc 6213053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 317
Target Start/End: Original strand, 21067869 - 21067951
Alignment:
Q  236 gtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcgtccga 317  Q
    ||||||||| ||| |||| ||||||||| |||| ||||||||||| |||| |||||  | |||||||| ||||||||| ||||    
T  21067869 gtaaactcgatttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 21067951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 23017023 - 23017089
Alignment:
Q  225 ttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||| ||||||||||||| ||| | || |||| ||||  |||||||||||||||||||| |||||    
T  23017023 ttaacttggaggtaaactcgatttctcgtaaaattggaagatttgacgagtttgaccgagttaacac 23017089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 23101738 - 23101835
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| |||||||  ||||||| || |||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  23101738 cgagtttacatttttaggtacaaaaatcgtgttaactctaaggtaaaatcagtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 23101835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 317
Target Start/End: Original strand, 21486142 - 21486266
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgt 293  Q
    |||||||||  |||||| |  ||||| ||| |||||| | |||||||||||  ||||||| ||||  ||| |||||| |||||||| ||||| |||||      
T  21486142 cgagtttacacttttagatatcaaaatcgtgttaacttgaaggtaaactcgaattttggtaaaattagaaggtttgatgagtttgatcgagttaacactc 21486241  T
Q  294 gttaaactcg-gtaaactcgtccga 317  Q
    | |||||||| ||||||||| ||||    
T  21486242 ggtaaactcgtgtaaactcgaccga 21486266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 30823116 - 30823204
Alignment:
Q  225 ttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcg 312  Q
    ||||||| |||||||||||||||| | || ||||||||| |||  ||||||||||  |||| |||||  | |||||||| |||||||||    
T  30823116 ttaactctgaggtaaactcggtttctagtaaaatcggaaggttcaacgagtttgattgagttaacactcggtaaactcgtgtaaactcg 30823204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 3e-70; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 155 - 313
Target Start/End: Complemental strand, 38413594 - 38413436
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  38413594 cactgttccataaatcgagtgttaactcgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtgtaaactcggaggtaaactcggtttttggtg 38413495  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  38413494 aaatcggaaagtttgacgagtttgaccgagttaacacgtgttaaactcgataaactcgt 38413436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 160 - 313
Target Start/End: Original strand, 13898442 - 13898595
Alignment:
Q  160 ttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatc 259  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||    
T  13898442 ttccacaaatcgagtgttaacacgtaaactcgtctgagtttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatc 13898541  T
Q  260 ggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13898542 ggaaagtttgacgagtttgaccgagttaacacgtgttaaactcggtaaactcgt 13898595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 160 - 313
Target Start/End: Original strand, 14039059 - 14039212
Alignment:
Q  160 ttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatc 259  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||    
T  14039059 ttccacaaatcgagtgttaacacgtaaactcgtctgagtttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatc 14039158  T
Q  260 ggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14039159 ggaaagtttgacgagtttgaccgagttaacacgtgttaaactcggtaaactcgt 14039212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 155 - 313
Target Start/End: Original strand, 19948499 - 19948657
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  19948499 cactgtttcacaaatcgagtgttaacatgtaaactcgcccgagtttacatttttaggtggcaaaaacgtgttaactcggaggtaaactcagtttttggtg 19948598  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19948599 aaatcggaaagtttgacgagtttgaccgagttaacacgtgttaaactcggtaaactcgt 19948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 186 - 310
Target Start/End: Original strand, 3991765 - 3991889
Alignment:
Q  186 aactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagt 285  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3991765 aactcgttcgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagt 3991864  T
Q  286 gaacacgtgttaaactcggtaaact 310  Q
     ||||||||||||||||||||||||    
T  3991865 taacacgtgttaaactcggtaaact 3991889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 155 - 309
Target Start/End: Original strand, 33262814 - 33262968
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||||| ||||  ||| ||||| ||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  33262814 cactgttccataaattaagtattaactcgtaaactcgttcgagtttacgtttttaggtggcaaaaacgtgtaaactcgaaggtaaactcggtttttggtg 33262913  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaac 309  Q
    |||||||||||||||||||||||||| |||| |||||||| ||||||||||||||    
T  33262914 aaatcggaaagtttgacgagtttgactgagttaacacgtggtaaactcggtaaac 33262968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 155 - 313
Target Start/End: Original strand, 41978798 - 41978956
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||| |||||||||| |||||||||| |||||||||  |||  |||||||||||||||||||||||| | |||| |||||||||||||||||||||| ||    
T  41978798 cactcttccacaaattgagtgttaactcgtaaactcacccggctttacgtttttaggtggcaaaaacatgttaattcggaggtaaactcggtttttgatg 41978897  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  41978898 aaatcggaaagtttgacgagtttgaccgagttaacacgtgttaaactcagtaaactcgt 41978956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 160 - 313
Target Start/End: Original strand, 12877652 - 12877796
Alignment:
Q  160 ttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatc 259  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  12877652 ttccataaatcgagtgttaactcgtaaattcgtccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttgatgaaatc 12877751  T
Q  260 ggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    ||||         ||||||||||||| |||| ||||||||||||||||||||||    
T  12877752 ggaa---------agtttgaccgagttaacatgtgttaaactcggtaaactcgt 12877796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 227 - 329
Target Start/End: Complemental strand, 45161201 - 45161097
Alignment:
Q  227 aactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactc--ggtaaactcgtccgagtttacc 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||   |||||||||||||||||||||    
T  45161201 aactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagttcgaccgagttaacacgtgttaaactcagagtaaactcgtccgagtttacc 45161102  T
Q  325 tttga 329  Q
    |||||    
T  45161101 tttga 45161097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 158 - 303
Target Start/End: Complemental strand, 11153487 - 11153342
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    |||||||||||| |||||||||| ||||||||||  ||| ||||||||||||||||   ||| ||| |||||||||||||||||||||||| |||| |||    
T  11153487 tgttccacaaattgagtgttaactcgtaaactcggacgaatttacgtttttaggtgctgaaatcgtgttaactcggaggtaaactcggtttctggtaaaa 11153388  T
Q  258 tcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg 303  Q
    |||  | ||||| ||||||||||||||| |||||||||||||||||    
T  11153387 tcgagatgtttggcgagtttgaccgagttaacacgtgttaaactcg 11153342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 313
Target Start/End: Complemental strand, 43318886 - 43318743
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||||||||| |||  |||||||| |||||||     ||       |||||||| |||    
T  43318886 tgttccacaaatcgagtgttaactcgttaactcgttcgagtttacgtttttatgtgctaaaaacgtgttaactc-----ta-------tttttggtaaaa 43318799  T
Q  258 tcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  43318798 tcggaaagtttgacgagtttgaccgagttaacatgtgttaaactcggtaaactcgt 43318743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 18900030 - 18899932
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| | || ||||||||||||||||||||||||||||||| |||||    
T  18900030 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 18899932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 198 - 323
Target Start/End: Original strand, 24025852 - 24025978
Alignment:
Q  198 tttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgtta 297  Q
    |||| ||||||||||| ||||||||| |||||| |||| ||||||||||||||||| ||||| ||| ||||||||| || ||| |||| |||||||||||    
T  24025852 tttaagtttttaggtgtcaaaaacgtgttaacttggagataaactcggtttttggtaaaatcagaatgtttgacgaattggactgagttaacacgtgtta 24025951  T
Q  298 aactcg-gtaaactcgtccgagtttac 323  Q
    |||||| || |||||| | ||||||||    
T  24025952 aactcgtgtgaactcgactgagtttac 24025978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 35404420 - 35404323
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||||||||||  | ||| ||| ||||||  ||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||    
T  35404420 cgagtttacgtttttaggtaccgaaatcgtgttaacttagaggtaaactcggtttttggtaaaattggaaagtttgacgagtttgaccgagttaacac 35404323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 165 - 308
Target Start/End: Original strand, 30850239 - 30850381
Alignment:
Q  165 caaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaa 264  Q
    |||||||||| || | ||||||||||| | | ||||||||||||||||| ||||| ||||| |||||||||||||| ||| |||||||| |||||  |||    
T  30850239 caaatcgagtattgaaacgtaaactcgcctgcgtttacgtttttaggtgccaaaatcgtataaactcggaggtaaattcgttttttggtaaaatcataaa 30850338  T
Q  265 gtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaa 308  Q
    | |||||  |||||||||||| ||||||  ||||| ||||||||    
T  30850339 g-ttgaccggtttgaccgagttaacacggcttaaaatcggtaaa 30850381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 311
Target Start/End: Complemental strand, 37810979 - 37810867
Alignment:
Q  199 ttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaa 298  Q
    |||||||||||| || ||||||||| |||| ||||||||||||| | ||||||||||||||  || |||||| ||||||||||||   ||||||||||||    
T  37810979 ttacgtttttagatgccaaaaacgtgttaaatcggaggtaaacttgatttttggtgaaatcataatgtttgatgagtttgaccgatctaacacgtgttaa 37810880  T
Q  299 actcggtaaactc 311  Q
    ||||  |||||||    
T  37810879 actcaataaactc 37810867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 283
Target Start/End: Original strand, 15224234 - 15224319
Alignment:
Q  198 tttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccga 283  Q
    ||||||| |||||||  ||||| ||| ||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  15224234 tttacgtgtttaggtaccaaaatcgtgttaactcagaggtaaactcgatttctggtgaaatcgaaaagtttgacgagtttgaccga 15224319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 323
Target Start/End: Original strand, 40829635 - 40829766
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    |||||| ||| |||||||||  ||||| ||| |||||||||||||||||||||||| |||| |||| | || ||||||||| ||||||||||| |||||     
T  40829635 ccgagtctacatttttaggtatcaaaatcgtgttaactcggaggtaaactcggtttctggtaaaatagaaaggtttgacgaatttgaccgagttaacact 40829734  T
Q  293 tgttaaactc-ggtaaactcgtccgagtttac 323  Q
       |||||||  ||||||||| ||||||||||    
T  40829735 caataaactcatgtaaactcgaccgagtttac 40829766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 2308811 - 2308718
Alignment:
Q  198 tttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||  ||||| ||| |||||||||||||||| ||||||| |||| |||||  |||||||||| ||||||||| ||| |||||    
T  2308811 tttacgtttttatgtaccaaaatcgtgttaactcggaggtaaattcggtttgtggtaaaatcaaaaagtttgacaagtttgaccaagttaacac 2308718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 18177720 - 18177817
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| ||||||||| ||||||||||| |||| |||||    
T  18177720 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaagtttaacgagtttgacagagttaacac 18177817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 321
Target Start/End: Complemental strand, 18727727 - 18727620
Alignment:
Q  215 caaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcgt 313  Q
    ||||| ||| ||||||||||||||||||||  || |||| |||||  |||||||||||||||| ||||||| ||||   | |||||||| |||||||||     
T  18727727 caaaaccgtgttaactcggaggtaaactcgaattctggtaaaatcaaaaagtttgacgagtttcaccgagttaacattcgataaactcgtgtaaactcga 18727628  T
Q  314 ccgagttt 321  Q
    ||||||||    
T  18727627 ccgagttt 18727620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 379378 - 379476
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||| |||||||||||||||   |||| ||| ||||||| |||||||| |||||||||| | ||||||||| | || ||||||||||| |||| |||||    
T  379378 ccgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttttgataaaatcggaaggcttaacgagtttgactgagttaacac 379476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 10657878 - 10657976
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||   |||| ||| ||||||| |||||||| ||| |||||||| |||| |||| |||| |||||||| || |||| |||||    
T  10657878 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggtaaaattggaaggtttaacgagtttaactgagttaacac 10657976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 280
Target Start/End: Original strand, 15926378 - 15926464
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    ||||||||||||||| |||  ||||| ||| | ||||||||||| |||||| ||| |||| |||||| || ||||||||||||||||    
T  15926378 cgagtttacgttttttggtaccaaaatcgtgtcaactcggaggttaactcgatttctggtaaaatcgcaatgtttgacgagtttgac 15926464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 28740048 - 28739950
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| ||||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  28740048 ccgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 28739950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 25288611 - 25288736
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    |||||||||| |||||||||   |||| ||| ||||||| |||||||||||||||| | || ||||||||| |||| ||| ||||||  |||| |||||     
T  25288611 ccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcggaaggtttaacgggtttgattgagttaacact 25288710  T
Q  293 tgttaaactcg-gtaaactcgtccga 317  Q
     | |||||||| ||||||||| ||||    
T  25288711 cgataaactcgtgtaaactcgaccga 25288736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 303
Target Start/End: Original strand, 26789234 - 26789343
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgt 293  Q
    |||||| || |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| ||||| |    
T  26789234 cgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactt 26789333  T
Q  294 gttaaactcg 303  Q
    | ||||||||    
T  26789334 gataaactcg 26789343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 3575291 - 3575387
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||   |||| | | ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  3575291 gagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 3575387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 3858524 - 3858440
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagttt 277  Q
    |||| |||||||||||| ||| |||||  || | |||| | ||||||||||| |||||||| ||||||||| |||||||||||||    
T  3858524 ccgaatttacgtttttaagtgtcaaaattgtgtcaacttgaaggtaaactcgatttttggtaaaatcggaatgtttgacgagttt 3858440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 308
Target Start/End: Original strand, 28545724 - 28545860
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    |||||||||||||||||  |||| |||||| ||||| |||||||| |||||| ||| |||||||||            |||||||| |||| ||||||||    
T  28545724 tgttccacaaatcgagt--taactcgtaaattcgtctgagtttacttttttacgtgccaaaaacgt------------gtaaactcagtttgtggtgaaa 28545809  T
Q  258 tcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaa 308  Q
    | | |||||||||||| ||| || || | |||||||||||||||| |||||    
T  28545810 tagaaaagtttgacgaatttaactgatttaacacgtgttaaactctgtaaa 28545860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 6224330 - 6224233
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||||||||||    ||| ||| |||||||  |||| |||||||||| | || ||||||||| |||| ||||||||||| |||| |||||    
T  6224330 cgagtttacgtttttaggtacacaaatcgtgttaactcttaggtgaactcggtttctagtaaaatcggaaggtttaacgagtttgactgagttaacac 6224233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 7027352 - 7027449
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| | || |||| ||||||||||| |||| |||||    
T  7027352 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattgaaaggtttaacgagtttgactgagttaacac 7027449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 28845034 - 28845131
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||| ||||||||||   |||| ||| ||||||| |||||||| ||||||| || | |||| |||| |||| ||||||||||| |||| |||||    
T  28845034 cgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgataaaattggaaggtttaacgagtttgactgagttaacac 28845131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 38295788 - 38295700
Alignment:
Q  225 ttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcg 312  Q
    |||| ||||||| ||| | ||||| |||| ||||| ||| ||||||||||||||||||||| |||||  | |||||||| |||||||||    
T  38295788 ttaattcggaggaaaatttggtttctggtaaaatcagaaggtttgacgagtttgaccgagttaacactcggtaaactcgtgtaaactcg 38295700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 33136064 - 33136151
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    ||||||||| ||||||||||   |||| ||| ||||||| |||||||||||| ||| ||||  |||||||| |||| |||| ||||||    
T  33136064 ccgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggtataatcggaaggtttaacgaatttgac 33136151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 43825320 - 43825386
Alignment:
Q  225 ttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  43825320 ttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 43825386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 308
Target Start/End: Complemental strand, 34138097 - 34138064
Alignment:
Q  275 tttgaccgagtgaacacgtgttaaactcggtaaa 308  Q
    ||||||||||| ||||||||||||||||||||||    
T  34138097 tttgaccgagttaacacgtgttaaactcggtaaa 34138064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 317
Target Start/End: Original strand, 43078970 - 43079063
Alignment:
Q  225 ttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcgtccga 317  Q
    ||||||| |||||||||||||||| || | ||||| ||| |||| ||||||||||  |||| |||||  | |||||||| ||||||||| ||||    
T  43078970 ttaactctgaggtaaactcggtttctgttaaaatccgaaggtttaacgagtttgattgagttaacactcgataaactcgtgtaaactcgaccga 43079063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 313
Target Start/End: Complemental strand, 13833172 - 13833052
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgt 293  Q
    |||||||||||||||||||   |||| ||| ||||||| |||||||||||  ||| | || ||||| |||  ||| || |||||||| |||| |||||      
T  13833172 cgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcaatttctagtaaaatcagaagatttaacaagtttgactgagttaacactc 13833073  T
Q  294 gttaaactcg-gtaaactcgt 313  Q
    | |||||||| ||||||||||    
T  13833072 ggtaaactcgtgtaaactcgt 13833052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 6e-65; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 153 - 310
Target Start/End: Original strand, 34909551 - 34909708
Alignment:
Q  153 atcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttgg 252  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  34909551 atcattgttccacaaatcgagtgttaacacgtaaactcgctcgagtttacgtttttaggtggcaaaaacgtgttaattcggaggtaaactcggtctttgg 34909650  T
Q  253 tgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaact 310  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  34909651 tgaaatcggaaagtttgaggagtttgaccgagtgaacgcgtgttaaactcggtaaact 34909708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 161 - 323
Target Start/End: Complemental strand, 21238893 - 21238729
Alignment:
Q  161 tccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcg 260  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  21238893 tccacaaatcgagtgttaacacgtaaattcgtccgattttacgtttttagatggcaaaaacgtgttaactcggaggtaaactcggtttttggtaaaatcg 21238794  T
Q  261 gaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg--gtaaactcgtccgagtttac 323  Q
    ||||||||||||||||||||||||| ||||| |||||||||||  |||||||||| |||||||||    
T  21238793 gaaagtttgacgagtttgaccgagttaacacatgttaaactcggagtaaactcgttcgagtttac 21238729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 155 - 307
Target Start/End: Complemental strand, 2675214 - 2675062
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    ||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  2675214 cactgtttcacaaatcgagtgttaatacgtaaactcgcccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtg 2675115  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaa 307  Q
    |||||| |||||||||||||||||||||||| ||||||||||||| |||||||    
T  2675114 aaatcgaaaagtttgacgagtttgaccgagttaacacgtgttaaaatcggtaa 2675062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 155 - 312
Target Start/End: Complemental strand, 33892982 - 33892824
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    ||||||| ||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||    
T  33892982 cactgttgcacaaatcgagtgttaacacgtaaattcgttcgaatttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttgatg 33892883  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcg 312  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  33892882 aaatcggaaagtttgacgagtttgaccgagttaacacgtgttaaactcgtgtaaactcg 33892824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 154 - 312
Target Start/End: Original strand, 25868759 - 25868909
Alignment:
Q  154 tcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggt 253  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25868759 tcactgttccacaaatcgagtgttaacacgtaaactcgcccgagtttatgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggt 25868858  T
Q  254 gaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcg 312  Q
    ||||||||||         ||||||||||||||||||||||||||||||| |||||||||    
T  25868859 gaaatcggaa---------agtttgaccgagtgaacacgtgttaaactcgtgtaaactcg 25868909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 41804537 - 41804403
Alignment:
Q  20 gcaaagtccaaaggtaaggattaaccaaacacatattatacaaaatcgtacaatctatacattgcccaaacttttgagatttgtaaatagcatcatcttt 119  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||||||||||||| ||||||||||    
T  41804537 gcaaagtccaaaggtaaggattaaccaaacacattttatacaaaatcatacaatctatacaatgaccaaacttttgagatttgtaaataccatcatcttt 41804438  T
Q  120 cttgagttgattacctctccctccatcctcagcat 154  Q
    |||  || |||||||||| ||||||||||||||||    
T  41804437 ctttggtggattacctcttcctccatcctcagcat 41804403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 153 - 313
Target Start/End: Original strand, 19222982 - 19223129
Alignment:
Q  153 atcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttgg 252  Q
    |||| |||||||||||| |||||||||| |||||||||| |||||||||| ||||||||||||||||||||              |||||||||||||||    
T  19222982 atcagtgttccacaaattgagtgttaactcgtaaactcgcccgagtttacatttttaggtggcaaaaacgtg-------------aaactcggtttttgg 19223068  T
Q  253 tgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgt 313  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||||||| ||||||||    
T  19223069 tgaaatcggaaagtttgacgagtgtaaccgagttaacacgtgttaaactcggaaaactcgt 19223129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 317
Target Start/End: Original strand, 16800693 - 16800851
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    |||||||||||| |||||||||| ||||||||  | ||||||||| ||||||||||  ||||| || |||||| | |||| ||||||||||| |||||||    
T  16800693 tgttccacaaatggagtgttaactcgtaaactttttcgagtttacatttttaggtgttaaaaatgttttaacttgaaggtgaactcggtttt-ggtgaaa 16800791  T
Q  258 tcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcgtccga 317  Q
    |  ||| ||||||||||||||||||| | ||||| |||||||||||||||||||| ||||    
T  16800792 ttagaatgtttgacgagtttgaccgacttaacacatgttaaactcggtaaactcgaccga 16800851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 164 - 302
Target Start/End: Complemental strand, 16497867 - 16497729
Alignment:
Q  164 acaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaa 263  Q
    ||||||||||||||||| ||||||||| |  ||||||||||||||||||| |||||| || |||| ||  || |||||||| |||||| |||||||||||    
T  16497867 acaaatcgagtgttaactcgtaaactcatttgagtttacgtttttaggtgccaaaaatgtgttaattcaaagataaactcgatttttgctgaaatcggaa 16497768  T
Q  264 agtttgacgagtttgaccgagtgaacacgtgttaaactc 302  Q
     ||||||||||||||||||| | |||| |||||||||||    
T  16497767 tgtttgacgagtttgaccgacttaacatgtgttaaactc 16497729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 323
Target Start/End: Original strand, 31913467 - 31913628
Alignment:
Q  163 cacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcgga 262  Q
    ||||||||| |||||||| |||||| |||| ||| |||| |||||||| || |||||| || |||||| ||||||||||||| ||||||||||||||| |    
T  31913467 cacaaatcgtgtgttaactcgtaaattcgttcgaatttatgtttttagatgtcaaaaatgtgttaacttggaggtaaactcgatttttggtgaaatcgaa 31913566  T
Q  263 aagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcgtccgagtttac 323  Q
    | ||| | ||| ||||| ||||| |||| |||||||||||| ||||||||| ||||||||||    
T  31913567 atgttcgtcgaatttgatcgagttaacatgtgttaaactcgagtaaactcgaccgagtttac 31913628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 7125267 - 7125169
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||    
T  7125267 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacac 7125169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 198 - 323
Target Start/End: Complemental strand, 5651284 - 5651158
Alignment:
Q  198 tttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgtta 297  Q
    ||||||| |||||||  ||||| ||| |||||||||||||||||||| ||| ||||||||| | |||||||||||||||||||||||| |||||    ||    
T  5651284 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaattgaaaagtttgacgagtttgaccgagttaacactcagta 5651185  T
Q  298 aactcg-gtaaactcgtccgagtttac 323  Q
    |||||| ||||| ||| ||||||||||    
T  5651184 aactcgtgtaaaatcggccgagtttac 5651158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 28623268 - 28623171
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||| ||||||||  |||||||| ||||||||||| |||||||| ||| |||| |||| | |||||||||||||||||||||||| |||||    
T  28623268 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggagataaactcgatttctggtaaaattgcaaagtttgacgagtttgaccgagttaacac 28623171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 24258621 - 24258534
Alignment:
Q  157 ctgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcg 244  Q
    |||||||| ||||||||||||||| | |||| ||| | || |||||||||||||||||||||||||| | ||||||||||||||||||    
T  24258621 ctgttccataaatcgagtgttaactcctaaattcgcctgaatttacgtttttaggtggcaaaaacgtgtaaactcggaggtaaactcg 24258534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 4240220 - 4240095
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    |||||||||||||||||||||  |||| ||| ||||||| ||||||||||| |||| |||| ||||||||| |||| |||||||||||  ||| |||||     
T  4240220 ccgagtttacgtttttaggtgcaaaaatcgtgttaactctgaggtaaactccgtttctggtaaaatcggaaggtttaacgagtttgacaaagttaacact 4240121  T
Q  293 tgttaaactcg-gtaaactcgtccga 317  Q
     | |||||||| ||||||||| ||||    
T  4240120 cggtaaactcgtgtaaactcgaccga 4240095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 311
Target Start/End: Complemental strand, 29716891 - 29716774
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtg 294  Q
    ||||||||||||||||||  ||||| ||| |||||||| ||||||||| | ||| |||| ||||| ||| |||||||||||| || || |||||||| ||    
T  29716891 gagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaacttgatttctggtaaaatcagaaggtttgacgagttggatcgggtgaacacttg 29716792  T
Q  295 ttaaactcg-gtaaactc 311  Q
     |||||||| ||||||||    
T  29716791 gtaaactcgtgtaaactc 29716774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 3032287 - 3032413
Alignment:
Q  174 tgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacga 273  Q
    |||||||  |||||||||  ||||||||||| | |||||| ||||| ||||||| |||||||||||| ||| |||||| |||||||  || ||||| |||    
T  3032287 tgttaactagtaaactcgaacgagtttacgtctgtaggtgtcaaaatcgtattagctcggaggtaaaatcgttttttgttgaaatcataatgtttg-cga 3032385  T
Q  274 gtttgaccgagtgaacacgtgttaaact 301  Q
    |||||| ||||| ||||| || ||||||    
T  3032386 gtttgagcgagttaacacatggtaaact 3032413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 1460900 - 1460802
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||   ||||  || ||||||| |||||||||||||||| |||| ||||||||| | || ||||||||||| |||| |||||    
T  1460900 ccgagtttacgtttttaggtacaaaaattgtgttaactcagaggtaaactcggtttctggtaaaatcggaaggcttaacgagtttgactgagttaacac 1460802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 37798222 - 37798124
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| ||||  ||  |||||||| |||||||  ||||||||||  ||| |||| |||||| |||||||||||||||||||||||| |||||    
T  37798222 ccgagtttacgtgtttatctgttaaaaacgtgttaactcaaaggtaaactcaatttctggtaaaatcgaaaagtttgacgagtttgaccgagttaacac 37798124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 5949562 - 5949657
Alignment:
Q  196 agtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  5949562 agtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 5949657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 16548946 - 16548860
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    |||||||||||||||||||  ||||| ||| | |||||||||||||||||  ||| |||| |||||| || ||||||||| ||||||    
T  16548946 cgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcaatttctggtaaaatcgaaatgtttgacgaatttgac 16548860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 280
Target Start/End: Original strand, 29758706 - 29758791
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    |||||||||||||||||||  ||||| ||| |||||||||||||| | | | ||| |||| ||||||||| ||||||||||||||||    
T  29758706 cgagtttacgtttttaggtatcaaaatcgtgttaactcggaggtagatttgatttctggt-aaatcggaatgtttgacgagtttgac 29758791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 37014302 - 37014400
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| | || |||| |||||||||||||||| |||||    
T  37014302 ccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattgaaaggtttaacgagtttgaccgagttaacac 37014400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 39852819 - 39852916
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||||||||   |||| ||| ||||||| |||||||| ||| |||||||| |||| |||| |||| ||||||||||| |||| |||||    
T  39852819 cgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggtaaaattggaaggtttaacgagtttgacggagttaacac 39852916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 4550012 - 4549920
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagt 285  Q
    |||||||||||| |||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| ||||    
T  4550012 ccgagtttacgtgtttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagt 4549920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 15286634 - 15286536
Alignment:
Q  195 gagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactc--ggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||| ||||| ||| | ||||||||| |||||||    |||||||| |||||||||||||   |||||||||| |||| |||||    
T  15286634 gagtttacgtttttaggtgtcaaaatcgtgtaaactcggagataaactctttttttttggtaaaatcggaaagttgaccgagtttgactgagttaacac 15286536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 280
Target Start/End: Original strand, 13926380 - 13926466
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    |||||||||||||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| | |||||||||    
T  13926380 cgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaaggagtttgac 13926466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 308
Target Start/End: Original strand, 29964138 - 29964215
Alignment:
Q  230 tcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaa 308  Q
    ||||||||||| | | |||||||||||||  ||| ||||||| ||||||||| ||| ||||| ||||||| ||||||||    
T  29964138 tcggaggtaaatttgatttttggtgaaat-tgaatgtttgacaagtttgaccaagttaacacatgttaaattcggtaaa 29964215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 308
Target Start/End: Complemental strand, 30010660 - 30010583
Alignment:
Q  230 tcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaa 308  Q
    ||||||||||| | | |||||||||||||  ||| ||||||| ||||||||| ||| ||||| ||||||| ||||||||    
T  30010660 tcggaggtaaatttgatttttggtgaaat-tgaatgtttgacaagtttgaccaagttaacacatgttaaattcggtaaa 30010583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 155 - 312
Target Start/End: Original strand, 1328 - 1486
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| |||    
T  1328 cactgtttcacaaatcgagtgttaactcgtaaactcgaccgagtttacgtttttaggtggcaaaaacatgttaacttggaggtaaactcggtttttagtg 1427  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg-gtaaactcg 312  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  1428 aaatcggaaagtttgacgagtttaaccgagttaacacgtgttaaactcgtgtaaactcg 1486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 327
Target Start/End: Complemental strand, 25740 - 25571
Alignment:
Q  154 tcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggt 253  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  25740 tcactgttccacaaatcgagtgttaactcgtaaactc-tctgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttgg- 25643  T
Q  254 gaaatcggaaagtttgacgagtttgaccgag-tgaacacgtgttaaactcg--gtaaactcgtccgagtttaccttt 327  Q
        | | |||||||||||||||||  || | | ||| |||| ||||||||  ||||||||||||||||||||||||    
T  25642 ----ttgaaaagtttgacgagtttgttcgtgttaaactcgtg-taaactcggagtaaactcgtccgagtttaccttt 25571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 2e-58; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 3385255 - 3385121
Alignment:
Q  20 gcaaagtccaaaggtaaggattaaccaaacacatattatacaaaatcgtacaatctatacattgcccaaacttttgagatttgtaaatagcatcatcttt 119  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3385255 gcaaagtccaaaggtaaggattaaccaaacatatattatacaaaatcgtacaatctagacattgcccaaacttttgagatttgtaaatagcatcatcttt 3385156  T
Q  120 cttgagttgattacctctccctccatcctcagcat 154  Q
    ||| |||||||||||||| ||||||||||| ||||    
T  3385155 cttcagttgattacctcttcctccatcctcggcat 3385121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 155 - 329
Target Start/End: Complemental strand, 28317211 - 28317026
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    |||||||| ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||| ||   |||||||||||||||||| |||||||||    
T  28317211 cactgttctacaaatcgagtgttaattcgtaaactcgtccgaatttacgtttttaggtggcaaaaaggtgaaaactcggaggtaaactcgatttttggtg 28317112  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgt---------taaactcg--gtaaactcgtccgagtttacctttga 329  Q
    |||||| |||||||||||||||||||||||| |||||||||         ||||||||  ||||||||||||||||||||||||||    
T  28317111 aaatcgaaaagtttgacgagtttgaccgagttaacacgtgtaaacccctgtaaactcggagtaaactcgtccgagtttacctttga 28317026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 301
Target Start/End: Original strand, 41252125 - 41252271
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtg 254  Q
    ||||| |||||||||||||||||| |  ||||| |||| ||||||||| |||||||||||||||||||| |||||||||| ||||||||| |||||| ||    
T  41252125 cactgctccacaaatcgagtgttagcttgtaaattcgttcgagtttacttttttaggtggcaaaaacgtgttaactcggaagtaaactcgatttttgatg 41252224  T
Q  255 aaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaact 301  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  41252225 aaatcggaaagtttgacgagtttaaccgagtcaacacgtgttaaact 41252271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 33177989 - 33177831
Alignment:
Q  153 atcactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttgg 252  Q
    |||| |||||||||||| |||||||||| ||||||||||  ||| |||| ||||||||||  |||||| || |||| | | ||||||||||| |||||||    
T  33177989 atcagtgttccacaaattgagtgttaactcgtaaactcgcacgattttatgtttttaggtaccaaaaatgtgttaatttgaaggtaaactcgatttttgg 33177890  T
Q  253 tgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactc 311  Q
    |||||| | || |||||||||||||||| |||| |||||||||||||||||||||||||    
T  33177889 tgaaattgaaatgtttgacgagtttgactgagttaacacgtgttaaactcggtaaactc 33177831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 1528041 - 1527921
Alignment:
Q  158 tgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaa 257  Q
    ||||||||||||||||||||||  |||||| | |||| | |||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  1528041 tgttccacaaatcgagtgttaaatcgtaaatttgtccaattttacgtttttaagtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaa 1527942  T
Q  258 tcggaaagtttgacgagtttg 278  Q
    |||||| ||| ||| ||||||    
T  1527941 tcggaatgttggacaagtttg 1527921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 19484214 - 19484312
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| || ||||||||  |||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||    
T  19484214 ccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacac 19484312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 323
Target Start/End: Complemental strand, 8029941 - 8029811
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgt 293  Q
    ||||||||||| |||||||  ||||| ||| ||||||| ||| |||||||| ||| |||| ||||||||| ||||||||||||||||||||| |||||      
T  8029941 cgagtttacgtgtttaggtaccaaaatcgtgttaactctgagataaactcgatttctggtaaaatcggaaggtttgacgagtttgaccgagttaacactc 8029842  T
Q  294 gttaaactcg-gtaaactcgtccgagtttac 323  Q
    | |||| ||| ||||||||| ||||||||||    
T  8029841 ggtaaaatcgtgtaaactcgaccgagtttac 8029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 6388222 - 6388139
Alignment:
Q  198 tttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgacc 281  Q
    |||| ||||||||||  ||||| ||| ||||||||||||||||||| |||| |||| ||||||||||||||||| |||||||||    
T  6388222 tttatgtttttaggtaccaaaatcgtgttaactcggaggtaaactctgtttatggtaaaatcggaaagtttgacaagtttgacc 6388139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 10295092 - 10294994
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||   | || ||| ||||||| |||||||||||||||| |||| ||||||||| |||| ||||||||||| |||| |||||    
T  10295092 ccgagtttacgtttttaggtacaacaatcgtgttaactctgaggtaaactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaacac 10294994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 305
Target Start/End: Complemental strand, 4871243 - 4871099
Alignment:
Q  161 tccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcg 260  Q
    |||||||||| |||||||||  |||  ||||||||| |||| ||||| |||||  ||| |||| |||| || |||||||||||| |||||  | ||||      
T  4871243 tccacaaatcaagtgttaacttgtaggctcgtccgaatttatgttttcaggtgctaaatacgtgttaattcagaggtaaactcgattttttataaaatta 4871144  T
Q  261 gaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggt 305  Q
    | | ||||||||||||| ||||||| |||| ||||||||||||||    
T  4871143 gtatgtttgacgagtttaaccgagttaacatgtgttaaactcggt 4871099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 280
Target Start/End: Original strand, 17234716 - 17234800
Alignment:
Q  196 agtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    ||||| |||||||||||  ||||| | ||| |||||||||||||||||| ||| |||| ||||||||| ||||||||||||||||    
T  17234716 agtttgcgtttttaggtaccaaaatcctatcaactcggaggtaaactcgatttctggtaaaatcggaatgtttgacgagtttgac 17234800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 31625756 - 31625876
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    |||||||||| |||||||||   ||||  || ||||||| |||||||||||||||| |||| ||||||||| |||| ||||||||||| |||| |||||     
T  31625756 ccgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaacact 31625855  T
Q  293 tgttaaactcg-gtaaactcg 312  Q
     | |||||||| |||||||||    
T  31625856 cggtaaactcgtgtaaactcg 31625876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 9288247 - 9288149
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  9288247 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 9288149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 12522598 - 12522528
Alignment:
Q  204 tttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgag 274  Q
    |||||||||  ||||| ||| ||||||| |||||||||||||||| |||| ||||||||| ||||||||||    
T  12522598 tttttaggtaccaaaatcgtgttaactcagaggtaaactcggtttctggtaaaatcggaaggtttgacgag 12522528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 26856553 - 26856651
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||| |||| |||||   |||| ||| ||||||| |||||||||||||||| |||| ||||| ||| |||| ||||||||||| |||| |||||    
T  26856553 ccgagtttatgtttataggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcagaaggtttaacgagtttgactgagttaacac 26856651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 321
Target Start/End: Complemental strand, 27878729 - 27878607
Alignment:
Q  200 tacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaa 299  Q
    ||||| |||||||  ||||| ||| |||||||||| ||||| ||||||| |||| ||||||| | |||||||||||||||  |||| |||||  | | ||    
T  27878729 tacgtgtttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactcgatgaa 27878630  T
Q  300 ctcg-gtaaactcgtccgagttt 321  Q
    |||| ||||||||| ||||||||    
T  27878629 ctcgtgtaaactcgaccgagttt 27878607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 321
Target Start/End: Complemental strand, 28018910 - 28018788
Alignment:
Q  200 tacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaa 299  Q
    ||||| |||||||  ||||| ||| |||||||||| ||||| ||||||| |||| ||||||| | |||||||||||||||  |||| |||||  | | ||    
T  28018910 tacgtgtttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactcgatgaa 28018811  T
Q  300 ctcg-gtaaactcgtccgagttt 321  Q
    |||| ||||||||| ||||||||    
T  28018810 ctcgtgtaaactcgaccgagttt 28018788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 32497989 - 32498114
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    ||||||||||||||||||||   |||| ||| ||||||| |||||||||||||||| | || ||||||||| |||| |||  |||||  |||| |||||     
T  32497989 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcggaaggtttaacggatttgattgagttaacact 32498088  T
Q  293 tgttaaactcg-gtaaactcgtccga 317  Q
     | |||||||| ||||||||| ||||    
T  32498089 aggtaaactcgtgtaaactcgaccga 32498114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 24067105 - 24067224
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac-cgagtgaacac 291  Q
    ||||||||||||||||||||  ||||| ||| | ||||||||||| |||||  ||| |||| ||||||| | |||||||||||| ||| ||||| ||| |    
T  24067105 ccgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtgaactcaatttctggtaaaatcggcatgtttgacgagttcgactcgagttaactc 24067204  T
Q  292 gtgttaaactcggtaaactcg 312  Q
    | || ||| ||||||||||||    
T  24067205 g-gtcaaaatcggtaaactcg 24067224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 18305729 - 18305631
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||| ||||||||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| | ||||||||| |||| |||||    
T  18305729 ccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaaagagtttgactgagttaacac 18305631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 37131387 - 37131301
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    ||||||||| |||||||||  ||||| ||| | ||||||||||||||||||  || |||| ||||| ||| |||||| |||||||||    
T  37131387 cgagtttacatttttaggtaccaaaatcgtgtcaactcggaggtaaactcgacttctggtaaaatcagaatgtttgaagagtttgac 37131301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 43166429 - 43166331
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||||||||||||||||   |||| ||| ||||||| |||||||| |  |||| |||| |||| | || |||||||||||||||| |||| |||||    
T  43166429 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaataagtttctggtaaaattgaaaggtttgacgagtttgactgagttaacac 43166331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 14781884 - 14781787
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||| || |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  14781884 cgagttgacatttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 14781787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 44725543 - 44725446
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||| |||| |||||||||   |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| |||| |||||    
T  44725543 cgagattacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacac 44725446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 303
Target Start/End: Complemental strand, 12522489 - 12522425
Alignment:
Q  239 aactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcg 303  Q
    |||||||||| |||| |||| | || ||||||||||||||||||||| ||||| || ||||||||    
T  12522489 aactcggtttctggtaaaattgaaaggtttgacgagtttgaccgagttaacacttggtaaactcg 12522425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 41393958 - 41394033
Alignment:
Q  196 agtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 271  Q
    |||||||||||||||||  ||||| ||| |||| |||||||||||||| |||| || | |||||| || |||||||    
T  41393958 agtttacgtttttaggtatcaaaatcgtgttaattcggaggtaaactcagtttctgataaaatcgaaaggtttgac 41394033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 16364159 - 16364241
Alignment:
Q  198 tttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgac 280  Q
    |||||||||||||||   |||| ||| |||||||  ||||||| ||||||| | || ||||||||| |||| |||||||||||    
T  16364159 tttacgtttttaggtacaaaaatcgtgttaactctaaggtaaattcggtttctagtaaaatcggaaggtttaacgagtttgac 16364241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 321
Target Start/End: Complemental strand, 27915681 - 27915551
Alignment:
Q  192 tccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||| ||||||| |||| ||  ||||| ||| ||||||| ||  |||| ||| ||| || | ||||||| | ||||||||||||||||||||| |||||    
T  27915681 tccgaatttacgtgtttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacac 27915582  T
Q  292 gtgttaaactcg-gtaaactcgtccgagttt 321  Q
      | | |||||| ||||||||| ||||||||    
T  27915581 tcgatgaactcgtgtaaactcgaccgagttt 27915551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 321
Target Start/End: Complemental strand, 27962100 - 27961970
Alignment:
Q  192 tccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||| ||||||| |||| ||  ||||| ||| ||||||| ||  |||| ||| ||| || | ||||||| | ||||||||||||||||||||| |||||    
T  27962100 tccgaatttacgtgtttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacac 27962001  T
Q  292 gtgttaaactcg-gtaaactcgtccgagttt 321  Q
      | | |||||| ||||||||| ||||||||    
T  27962000 tcgatgaactcgtgtaaactcgaccgagttt 27961970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 43308260 - 43308163
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    ||||||| |||||||||||  ||||| ||| ||||||| ||  |||| ||||||| |||| |||| |||| |||| || |||||||| |||| |||||    
T  43308260 cgagtttgcgtttttaggtaccaaaatcgtgttaactctgatataaaatcggtttctggtaaaattggaaggtttaacaagtttgactgagttaacac 43308163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 351 - 447
Alignment:
Q  155 cactgttccacaaatcgagtgttaacacgtaaactcgtccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttg 251  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  351 cactgtttcacaaatcgagtgttaacacgtaaactcgttcgagtttacgtttttatgtggcaaaaacgtgttaactcggaggtaaactcggtttttg 447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0421 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 1730 - 1817
Alignment:
Q  225 ttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcggtaaactcg 312  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||    
T  1730 ttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacacgtgttaaacttgttaaactcg 1817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 1006 - 908
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||||| |||||||  ||||| ||| |||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||| |||||    
T  1006 ccgagtttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcggtttctggtaaaatcggaaagtttgatgagtttgaccgagttaacac 908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 39389 - 39264
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    ||||||||||||||||||||  ||||| ||| ||||| | ||||| |||||||||| |||| |||||| || |||||||||||||||| |||| | |||     
T  39389 ccgagtttacgtttttaggtaccaaaatcgtgttaaccctgaggtcaactcggtttctggtaaaatcgaaaggtttgacgagtttgactgagttagcact 39290  T
Q  293 tgttaaactcg-gtaaactcgtccga 317  Q
    || |||||||| ||||||||| ||||    
T  39289 tgataaactcgtgtaaactcgaccga 39264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 300
Target Start/End: Original strand, 1314 - 1421
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    ||||||||||||||||||||   |||| ||| ||||||| |||||||| ||||||| | || |||| |||| |||| ||||||||||| |||| |||||     
T  1314 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttcttgtaaaattggaaggtttaacgagtttgactgagttaacact 1413  T
Q  293 tgttaaac 300  Q
     |||||||    
T  1414 cgttaaac 1421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 16751 - 16672
Alignment:
Q  225 ttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcgg 304  Q
    ||||||| |||||||||||||||| |||| |||||| || |||| ||||||||||| |||| ||||| || |||||||||    
T  16751 ttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcgg 16672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 20987 - 20908
Alignment:
Q  225 ttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcgg 304  Q
    ||||||| |||||||||||||||| |||| |||||| || |||| ||||||||||| |||| ||||| || |||||||||    
T  20987 ttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcgg 20908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 28814 - 28893
Alignment:
Q  225 ttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacgtgttaaactcgg 304  Q
    ||||||| |||||||||||||||| |||| |||||| || |||| ||||||||||| |||| ||||| || |||||||||    
T  28814 ttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcgg 28893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 10972 - 11070
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||||| |||||||||   |||| ||| ||||||| |||||||| ||| |||||||| |||| |||| |||| ||||||||||| |||| |||||    
T  10972 ccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggtaaaattggaaggtttaacgagtttgactgagttaacac 11070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 57818 - 57693
Alignment:
Q  193 ccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacacg 292  Q
    ||||||||||||||||||||   |||| ||| ||||||| |||||||||||||||| | || ||||| ||| |||| | ||||||||  |||| |||||     
T  57818 ccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcagaaggtttaatgagtttgattgagttaacact 57719  T
Q  293 tgttaaactcg-gtaaactcgtccga 317  Q
     | |||||||| ||||||||| ||||    
T  57718 cggtaaactcgtgtaaactcgaccga 57693  T

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Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 89280 - 89377
Alignment:
Q  194 cgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 291  Q
    |||||||| ||||||||||  ||| | ||| |||||| | ||||||||||| ||| |||| |||| |||| ||||||||||||||| ||||| |||||    
T  89280 cgagtttaagtttttaggtaccaatatcgtgttaacttgaaggtaaactcgatttctggtaaaattggaaggtttgacgagtttgatcgagttaacac 89377  T

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Target: scaffold0573 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 8854 - 8931
Alignment:
Q  192 tccgagtttacgtttttaggtggcaaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttg 269  Q
    ||||||||||| | |||||||  ||||| ||| ||||||| |||||||||||| ||| |||| ||||||||| |||||    
T  8854 tccgagtttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaaggtttg 8931  T

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Target: scaffold0347 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 15132 - 15201
Alignment:
Q  216 aaaaacgtattaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagt 285  Q
    |||| ||| ||||||| |||||||| ||||||| |||| |||| |||| |||| ||||||||||| ||||    
T  15132 aaaatcgtgttaactctgaggtaaaatcggtttatggtaaaattggaaggtttaacgagtttgactgagt 15201  T

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