View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1832_low_20 (Length: 236)
Name: NF1832_low_20
Description: NF1832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1832_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 37701995 - 37702216
Alignment:
| Q |
1 |
aattaaactgaaatcaatcaagctttataatgagnnnnnnncactcacatcaatgaaatcagtgagaaaacaagccggcataactttgaaaggcttaaca |
100 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37701995 |
aattaaactgaaatcaatcaagctttataatgagaaaaaaacactcacatcaatgaaatcagtgagaaaacaagccggcataactttgaaaggcttaaca |
37702094 |
T |
|
| Q |
101 |
aaagtaagcttaacaagctgcttcatcttctctggagtctgaggaatcaaaatcatagcagcttcatcaatattcttaaccacaaacaatccattctcca |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
37702095 |
aaagtaagcttaacaagctgcttcatcttctctggagtctgaggaatcaaaatcatagcagcttcatcaatattcttaaccacaaacaatccattctcca |
37702194 |
T |
|
| Q |
201 |
tatccttatcttccaaacaaac |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
37702195 |
tatccttatcttccaaacaaac |
37702216 |
T |
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