View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1832_low_4 (Length: 500)
Name: NF1832_low_4
Description: NF1832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1832_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 381; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 8 - 485
Target Start/End: Original strand, 10567493 - 10567966
Alignment:
| Q |
8 |
aaaatatgattaccaagttattagtatttttaaacctctagatcactcctggaaaaaatgttggttcctctaaagtgcaccatgagcaagatatcattat |
107 |
Q |
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| T |
10567493 |
aaaatatgattaccaagttattagtatttttaaacctttagatcactcctggaaaaaatgttggttcctctaaagtgcaccatgagcaagatatcattat |
10567592 |
T |
|
| Q |
108 |
cagataagaaaatatttgttgggtagctatagcttcgtccctgtcaatgttgacctagagcacatacattatcctcaaatttcaagaattcgatcactgc |
207 |
Q |
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| T |
10567593 |
cagataagaaaatatttgttgggtagctatagcttcgtccctgtcaatgttgacctagagcacat----tatcctcaaatttcaagaattcgatcactgc |
10567688 |
T |
|
| Q |
208 |
aacatactccaccaattctataaacatcttccttgtaacaattttatttacacaagcatgaaaaacaataattatactacttgcaaaatatttcatttta |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10567689 |
aacatactccaccaattctataaacatcttccttgtaacaattttatttacacaagcatgaaaaacaataattatactacttgcaaaatatttcatttta |
10567788 |
T |
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| Q |
308 |
tcaaaacaatatactaatatagcaaaagggaccacgtatatcatttatactcaaagaagatgtcattattctgnnnnnnnnnnnnnnnnnnnnnnnngag |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |
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| T |
10567789 |
tcaaaacaatatactaatatagcaaaagggaccacatatatcatttatactcaaagaagatgtcattattctgtttttttattttattttattttttgag |
10567888 |
T |
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| Q |
408 |
aaatcatacgtctttattctgttgttttccagcagagcttattcaatgcagctaacattccgctaagagtgtttggat |
485 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10567889 |
aaatcatacgtctttattctgttgttttccagcagagcttattcaatgcagctaacattccgctaagagtgtttggat |
10567966 |
T |
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