View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18331_high_24 (Length: 289)

Name: NF18331_high_24
Description: NF18331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18331_high_24
NF18331_high_24
[»] chr1 (52 HSPs)
chr1 (17-289)||(2430025-2430297)
chr1 (215-289)||(5806548-5806622)
chr1 (215-289)||(6911211-6911285)
chr1 (215-289)||(20260358-20260432)
chr1 (215-289)||(8331740-8331814)
chr1 (215-289)||(9115563-9115637)
chr1 (215-289)||(32824647-32824721)
chr1 (215-289)||(36361509-36361583)
chr1 (215-289)||(38964951-38965025)
chr1 (215-289)||(39930183-39930257)
chr1 (215-289)||(46666434-46666508)
chr1 (215-289)||(47031585-47031659)
chr1 (215-289)||(9832142-9832216)
chr1 (215-289)||(12190449-12190523)
chr1 (215-289)||(14788449-14788523)
chr1 (215-289)||(25473981-25474055)
chr1 (215-289)||(50191036-50191110)
chr1 (215-289)||(52630499-52630573)
chr1 (216-289)||(51445351-51445424)
chr1 (219-286)||(13653581-13653648)
chr1 (215-289)||(1597614-1597688)
chr1 (215-289)||(2632579-2632653)
chr1 (215-289)||(25789489-25789563)
chr1 (215-289)||(29091398-29091472)
chr1 (218-289)||(5518775-5518846)
chr1 (215-289)||(1228151-1228225)
chr1 (215-289)||(32202585-32202659)
chr1 (215-289)||(37436891-37436965)
chr1 (215-289)||(48916294-48916368)
chr1 (227-289)||(52699737-52699799)
chr1 (215-270)||(39329348-39329403)
chr1 (215-289)||(46960354-46960428)
chr1 (216-289)||(49627301-49627374)
chr1 (215-266)||(37726808-37726859)
chr1 (215-289)||(24116606-24116680)
chr1 (215-289)||(45771818-45771892)
chr1 (215-289)||(52186269-52186343)
chr1 (216-289)||(4683645-4683718)
chr1 (214-289)||(35187180-35187256)
chr1 (215-289)||(13932144-13932218)
chr1 (215-289)||(47677370-47677444)
chr1 (48-144)||(29888564-29888660)
chr1 (48-144)||(52607509-52607605)
chr1 (215-289)||(17475581-17475655)
chr1 (216-289)||(37261546-37261619)
chr1 (216-289)||(38519332-38519405)
chr1 (228-289)||(45813666-45813727)
chr1 (217-262)||(49824022-49824067)
chr1 (254-289)||(49823168-49823203)
chr1 (215-289)||(3939227-3939301)
chr1 (141-181)||(29888485-29888525)
chr1 (141-181)||(52607644-52607684)
[»] chr8 (38 HSPs)
chr8 (215-289)||(32661206-32661280)
chr8 (215-289)||(12710370-12710444)
chr8 (215-289)||(37392818-37392892)
chr8 (215-289)||(35818696-35818770)
chr8 (215-289)||(38363806-38363880)
chr8 (217-289)||(10896488-10896560)
chr8 (215-289)||(18297837-18297911)
chr8 (215-289)||(25837636-25837710)
chr8 (215-289)||(38133010-38133084)
chr8 (215-289)||(42755592-42755666)
chr8 (215-289)||(3049734-3049808)
chr8 (215-289)||(7930964-7931038)
chr8 (215-289)||(26061869-26061943)
chr8 (218-289)||(40197325-40197396)
chr8 (215-289)||(16313779-16313853)
chr8 (215-289)||(26602209-26602283)
chr8 (224-289)||(1554626-1554692)
chr8 (219-289)||(15226695-15226765)
chr8 (215-289)||(16219213-16219287)
chr8 (215-289)||(18726892-18726966)
chr8 (215-289)||(25899384-25899458)
chr8 (215-289)||(5020763-5020837)
chr8 (215-289)||(31117798-31117872)
chr8 (215-289)||(33444894-33444968)
chr8 (215-289)||(33533664-33533738)
chr8 (215-289)||(43872237-43872311)
chr8 (48-144)||(23927431-23927527)
chr8 (48-144)||(44199624-44199720)
chr8 (215-286)||(37982063-37982133)
chr8 (215-289)||(12649860-12649934)
chr8 (215-289)||(19161013-19161087)
chr8 (215-289)||(41432464-41432538)
chr8 (213-289)||(21137403-21137478)
chr8 (215-271)||(35394083-35394139)
chr8 (215-254)||(41228976-41229015)
chr8 (251-289)||(6805898-6805936)
chr8 (141-181)||(23927566-23927606)
chr8 (141-181)||(44199545-44199585)
[»] chr7 (46 HSPs)
chr7 (215-289)||(48160845-48160919)
chr7 (215-289)||(27214127-27214201)
chr7 (215-289)||(33378559-33378633)
chr7 (215-289)||(34930739-34930813)
chr7 (215-289)||(35488461-35488535)
chr7 (215-289)||(11329718-11329792)
chr7 (215-289)||(28904458-28904532)
chr7 (215-289)||(43948970-43949044)
chr7 (215-289)||(45265320-45265394)
chr7 (215-289)||(45448667-45448741)
chr7 (216-289)||(27248019-27248092)
chr7 (215-289)||(9947263-9947337)
chr7 (215-289)||(44565770-44565844)
chr7 (215-289)||(48341089-48341162)
chr7 (216-289)||(45045352-45045425)
chr7 (218-289)||(18823890-18823961)
chr7 (215-289)||(25924909-25924983)
chr7 (215-289)||(27419496-27419570)
chr7 (217-289)||(38543920-38543993)
chr7 (215-289)||(48313847-48313921)
chr7 (216-289)||(37534374-37534447)
chr7 (218-289)||(39553910-39553981)
chr7 (215-289)||(17276431-17276505)
chr7 (216-289)||(30686263-30686336)
chr7 (217-289)||(44819981-44820053)
chr7 (215-289)||(6656742-6656817)
chr7 (215-289)||(38396638-38396711)
chr7 (215-289)||(41632636-41632705)
chr7 (215-289)||(45722884-45722958)
chr7 (215-264)||(16916182-16916231)
chr7 (216-289)||(31598449-31598522)
chr7 (48-144)||(3716693-3716789)
chr7 (48-144)||(48511898-48511994)
chr7 (48-144)||(48726340-48726436)
chr7 (218-289)||(25097796-25097868)
chr7 (215-255)||(40212629-40212669)
chr7 (48-144)||(42106873-42106969)
chr7 (250-289)||(8419861-8419900)
chr7 (215-281)||(31922006-31922072)
chr7 (240-289)||(9814486-9814535)
chr7 (215-289)||(5543402-5543476)
chr7 (219-289)||(22156450-22156520)
chr7 (219-289)||(22212365-22212435)
chr7 (215-289)||(40385899-40385973)
chr7 (141-181)||(48512033-48512073)
chr7 (141-181)||(48726475-48726515)
[»] chr4 (48 HSPs)
chr4 (215-289)||(27555156-27555230)
chr4 (215-289)||(13230261-13230335)
chr4 (215-289)||(45748067-45748141)
chr4 (215-289)||(47670091-47670165)
chr4 (215-289)||(55968272-55968346)
chr4 (215-289)||(41859318-41859392)
chr4 (215-289)||(43722993-43723067)
chr4 (215-289)||(45595997-45596071)
chr4 (215-289)||(48873750-48873824)
chr4 (215-289)||(48879054-48879128)
chr4 (215-289)||(18405505-18405579)
chr4 (215-289)||(23686516-23686590)
chr4 (215-289)||(25932170-25932244)
chr4 (215-289)||(27763171-27763245)
chr4 (215-289)||(39730565-39730639)
chr4 (215-289)||(39835579-39835653)
chr4 (215-289)||(40435629-40435703)
chr4 (219-289)||(48519163-48519233)
chr4 (217-289)||(42773679-42773751)
chr4 (218-289)||(35999418-35999489)
chr4 (215-289)||(6280193-6280267)
chr4 (215-289)||(36860028-36860102)
chr4 (215-289)||(41744493-41744567)
chr4 (215-289)||(935855-935929)
chr4 (215-289)||(7258693-7258767)
chr4 (215-289)||(8321974-8322048)
chr4 (220-289)||(34238226-34238295)
chr4 (220-289)||(50673176-50673245)
chr4 (215-289)||(18931482-18931556)
chr4 (215-289)||(27942466-27942540)
chr4 (215-289)||(31938141-31938215)
chr4 (215-289)||(51968508-51968582)
chr4 (215-283)||(18405132-18405200)
chr4 (215-271)||(25916302-25916359)
chr4 (220-289)||(37014655-37014724)
chr4 (217-285)||(38413907-38413975)
chr4 (218-289)||(32953255-32953326)
chr4 (215-289)||(30790277-30790350)
chr4 (220-289)||(12276182-12276250)
chr4 (218-289)||(52413959-52414030)
chr4 (216-288)||(52469427-52469500)
chr4 (254-289)||(34049869-34049904)
chr4 (215-289)||(10401052-10401126)
chr4 (215-285)||(36858137-36858207)
chr4 (215-289)||(38394636-38394710)
chr4 (251-289)||(39498590-39498628)
chr4 (251-289)||(39501929-39501967)
chr4 (216-256)||(30415706-30415746)
[»] chr2 (52 HSPs)
chr2 (212-289)||(37233152-37233229)
chr2 (215-289)||(346617-346691)
chr2 (215-289)||(6171516-6171590)
chr2 (215-289)||(23943888-23943962)
chr2 (214-289)||(28311968-28312043)
chr2 (215-289)||(14777770-14777844)
chr2 (215-289)||(17965708-17965782)
chr2 (215-289)||(20426754-20426828)
chr2 (215-289)||(37533678-37533752)
chr2 (215-289)||(41729402-41729476)
chr2 (216-289)||(26309993-26310066)
chr2 (215-289)||(638319-638393)
chr2 (215-289)||(4559284-4559358)
chr2 (215-289)||(11071330-11071404)
chr2 (215-289)||(13760692-13760766)
chr2 (215-289)||(37192247-37192321)
chr2 (215-289)||(42674933-42675007)
chr2 (216-289)||(21737680-21737753)
chr2 (217-289)||(9734118-9734190)
chr2 (215-289)||(2050591-2050665)
chr2 (215-289)||(5770382-5770456)
chr2 (216-289)||(1623078-1623151)
chr2 (216-289)||(45693915-45693988)
chr2 (218-289)||(40951131-40951202)
chr2 (215-289)||(3902182-3902256)
chr2 (215-289)||(39819415-39819489)
chr2 (224-289)||(11763672-11763737)
chr2 (215-289)||(5003107-5003181)
chr2 (215-289)||(40569743-40569817)
chr2 (220-273)||(2521381-2521434)
chr2 (220-289)||(27358234-27358303)
chr2 (220-289)||(45408981-45409050)
chr2 (237-289)||(41750276-41750328)
chr2 (215-289)||(7007310-7007384)
chr2 (215-289)||(18713928-18714002)
chr2 (216-289)||(3254364-3254437)
chr2 (48-144)||(12506447-12506543)
chr2 (48-144)||(14679383-14679479)
chr2 (215-289)||(14832536-14832610)
chr2 (220-289)||(4875506-4875575)
chr2 (218-289)||(25724753-25724825)
chr2 (48-144)||(39589033-39589129)
chr2 (218-289)||(13790018-13790089)
chr2 (218-289)||(14253254-14253325)
chr2 (220-262)||(8868938-8868980)
chr2 (219-272)||(36590862-36590915)
chr2 (220-289)||(41298186-41298255)
chr2 (249-289)||(2521434-2521474)
chr2 (220-289)||(13539399-13539468)
chr2 (141-181)||(12506368-12506408)
chr2 (141-181)||(14679518-14679558)
chr2 (237-289)||(34356971-34357022)
[»] scaffold0006 (3 HSPs)
scaffold0006 (215-289)||(201651-201725)
scaffold0006 (219-286)||(143342-143409)
scaffold0006 (218-289)||(119051-119122)
[»] chr6 (17 HSPs)
chr6 (215-289)||(10246388-10246462)
chr6 (215-289)||(2657425-2657499)
chr6 (215-289)||(8029028-8029102)
chr6 (215-289)||(14170740-14170814)
chr6 (215-289)||(18897646-18897720)
chr6 (215-289)||(1316744-1316818)
chr6 (215-289)||(7053850-7053924)
chr6 (215-289)||(16968650-16968724)
chr6 (218-289)||(6706024-6706095)
chr6 (215-274)||(11570071-11570130)
chr6 (209-289)||(9762312-9762392)
chr6 (218-289)||(21008251-21008322)
chr6 (228-289)||(7344766-7344827)
chr6 (215-289)||(14781882-14781955)
chr6 (48-144)||(29653501-29653597)
chr6 (217-289)||(3869223-3869295)
chr6 (141-181)||(29653422-29653462)
[»] chr5 (35 HSPs)
chr5 (215-289)||(555978-556052)
chr5 (215-289)||(22936184-22936258)
chr5 (215-289)||(29543287-29543361)
chr5 (216-289)||(8646662-8646735)
chr5 (216-289)||(19065777-19065850)
chr5 (215-289)||(4765832-4765906)
chr5 (215-289)||(6091440-6091514)
chr5 (215-289)||(11855927-11856001)
chr5 (215-289)||(18411934-18412008)
chr5 (215-289)||(27481082-27481156)
chr5 (215-287)||(32535662-32535734)
chr5 (215-289)||(8406619-8406693)
chr5 (215-289)||(14207093-14207167)
chr5 (218-289)||(16720958-16721029)
chr5 (215-289)||(12970802-12970876)
chr5 (215-289)||(28602281-28602355)
chr5 (215-289)||(26637293-26637367)
chr5 (215-289)||(28429453-28429527)
chr5 (215-289)||(36703507-36703581)
chr5 (210-286)||(42012459-42012535)
chr5 (215-289)||(1664456-1664530)
chr5 (216-286)||(20962286-20962356)
chr5 (215-289)||(43347166-43347240)
chr5 (216-289)||(36978405-36978478)
chr5 (48-144)||(23197168-23197264)
chr5 (48-144)||(36664252-36664348)
chr5 (215-278)||(40276524-40276586)
chr5 (215-289)||(6930367-6930441)
chr5 (216-289)||(31583331-31583404)
chr5 (48-144)||(36677429-36677525)
chr5 (48-144)||(43561765-43561861)
chr5 (215-286)||(17251539-17251609)
chr5 (215-289)||(27480736-27480810)
chr5 (141-181)||(36664173-36664213)
chr5 (141-181)||(36677564-36677604)
[»] chr3 (47 HSPs)
chr3 (215-289)||(20414737-20414811)
chr3 (216-289)||(47115129-47115202)
chr3 (215-289)||(1098924-1098998)
chr3 (215-289)||(11239392-11239466)
chr3 (215-289)||(26848747-26848821)
chr3 (215-289)||(33218185-33218259)
chr3 (215-289)||(40907991-40908065)
chr3 (215-289)||(43132428-43132502)
chr3 (215-289)||(44952033-44952107)
chr3 (215-289)||(46359677-46359751)
chr3 (215-289)||(8476580-8476654)
chr3 (215-289)||(29512325-29512399)
chr3 (215-289)||(48340029-48340103)
chr3 (216-289)||(31611257-31611330)
chr3 (209-289)||(24783928-24784008)
chr3 (215-289)||(6231773-6231847)
chr3 (215-289)||(9320721-9320795)
chr3 (215-289)||(20297518-20297592)
chr3 (215-289)||(24574292-24574366)
chr3 (215-289)||(43719197-43719271)
chr3 (215-289)||(6832194-6832268)
chr3 (215-289)||(28770481-28770555)
chr3 (216-289)||(6927817-6927890)
chr3 (217-289)||(49216027-49216099)
chr3 (215-289)||(10822989-10823063)
chr3 (215-289)||(31436194-31436268)
chr3 (217-289)||(45826064-45826136)
chr3 (218-289)||(28124708-28124779)
chr3 (214-289)||(40584335-40584410)
chr3 (215-289)||(26849417-26849491)
chr3 (219-289)||(38140640-38140710)
chr3 (215-289)||(53165996-53166070)
chr3 (48-144)||(46075077-46075173)
chr3 (217-289)||(55435654-55435726)
chr3 (215-289)||(27822996-27823070)
chr3 (215-289)||(28693703-28693777)
chr3 (219-289)||(32070999-32071069)
chr3 (48-144)||(33825911-33826007)
chr3 (48-144)||(38326157-38326253)
chr3 (215-289)||(12228526-12228600)
chr3 (218-289)||(33650286-33650357)
chr3 (215-289)||(26085442-26085516)
chr3 (216-269)||(2566471-2566524)
chr3 (215-247)||(19532914-19532946)
chr3 (141-181)||(38326292-38326332)
chr3 (141-181)||(46074998-46075038)
chr3 (141-181)||(55490291-55490331)
[»] scaffold0702 (1 HSPs)
scaffold0702 (215-289)||(3837-3911)
[»] scaffold0662 (1 HSPs)
scaffold0662 (215-289)||(4191-4265)
[»] scaffold1284 (2 HSPs)
scaffold1284 (48-144)||(1715-1811)
scaffold1284 (141-181)||(1637-1677)
[»] scaffold0014 (5 HSPs)
scaffold0014 (48-144)||(161094-161190)
scaffold0014 (48-144)||(175240-175336)
scaffold0014 (48-144)||(170392-170486)
scaffold0014 (141-181)||(161015-161055)
scaffold0014 (141-181)||(175161-175201)
[»] scaffold0189 (1 HSPs)
scaffold0189 (215-289)||(29224-29298)


Alignment Details
Target: chr1 (Bit Score: 273; Significance: 1e-152; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 2430025 - 2430297
Alignment:
Q  17 aggtcacaaaaaatcagttcaataggcttagttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagct 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2430025 aggtcacaaaaaatcagttcaataggcttagttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagct 2430124  T
Q  117 tttaataggcaattttatattacaaagtctgctatgccagatgctatatatggaaggaaaagactcaacaagtaactaatctttagcttattctaaccgt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2430125 tttaataggcaattttatattacaaagtctgctatgccagatgctatatatggaaggaaaagactcaacaagtaactaatctttagcttattctaaccgt 2430224  T
Q  217 gtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2430225 gtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 2430297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 5806622 - 5806548
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5806622 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 5806548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 6911211 - 6911285
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6911211 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 6911285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 20260432 - 20260358
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20260432 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 20260358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 8331740 - 8331814
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8331740 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 8331814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 9115563 - 9115637
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  9115563 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 9115637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 32824647 - 32824721
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32824647 gtgtgtttgtttcaaatttacgaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 32824721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 36361509 - 36361583
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  36361509 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaaaatgggaattttatt 36361583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 38965025 - 38964951
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38965025 gtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 38964951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 39930183 - 39930257
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  39930183 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgggaattttatt 39930257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 46666434 - 46666508
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  46666434 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 46666508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 47031585 - 47031659
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  47031585 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 47031659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 9832216 - 9832142
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  9832216 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattcctcggaatataaagatgggaattttatt 9832142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 12190523 - 12190449
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  12190523 gtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaatataaagatgggaattttatt 12190449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 14788449 - 14788523
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  14788449 gtgtgtttgttttaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttatt 14788523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 25473981 - 25474055
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  25473981 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 25474055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 50191110 - 50191036
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||    
T  50191110 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttatt 50191036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 52630499 - 52630573
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  52630499 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttatt 52630573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 51445424 - 51445351
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  51445424 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatatatagatgagaattttatt 51445351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 13653581 - 13653648
Alignment:
Q  219 gtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaatttt 286  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  13653581 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttt 13653648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 1597688 - 1597614
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||  |||||||||| ||||||| |||||||||||||||||||||||    
T  1597688 gtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttgaaatataaagatgggaattttatt 1597614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 2632579 - 2632653
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||| ||||||||||||||    
T  2632579 gtgtatttgtttcaagtttactaaatttatttctaggaataacattccttagaatataaatatgggaattttatt 2632653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 25789489 - 25789563
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  25789489 gtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttatt 25789563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 29091398 - 29091472
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||  |||||||||||||||||||||||    
T  29091398 gtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttaaaatataaagatgggaattttatt 29091472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 5518846 - 5518775
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||| |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||||||||    
T  5518846 tgtttgtttgaagtttaccaaatttattcattggaataacattccttggaatataaagatgggaattttatt 5518775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 1228225 - 1228151
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||    
T  1228225 gtgtgtttgttttaagtttaccaaatttatttctatgaataaccttccttggaatataaagatgagaattttatt 1228151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 32202659 - 32202585
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  |||||||||  |||||||||| |||||||||||||||||||| ||||||||||    
T  32202659 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttatt 32202585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 37436965 - 37436891
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| || ||||||| |||||||||||||||| |||| |||||||||    
T  37436965 gtgtgtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaatatggaaattttatt 37436891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 48916368 - 48916294
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  |||||||||| |||||||||| |||||| ||||||||||||| ||||||||||    
T  48916368 gtgtgtttgtttcaagtttatcaaatttattcttaggaataacattccttagaatataaagatgagaattttatt 48916294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 52699799 - 52699737
Alignment:
Q  227 caagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  52699799 caagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 52699737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 39329348 - 39329403
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaata 270  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  39329348 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaata 39329403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 46960354 - 46960428
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||| ||||  ||||||||||||||||||||| ||| |||||||||||||||| ||| ||||||    
T  46960354 gtgtgtttgtttcaaatttatcaaatttattcctaggaataacattctttggaatataaagatgagaaatttatt 46960428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 49627301 - 49627374
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||| ||||| |||||||||  || ||||||| || ||||||||||||||||||||||||||||    
T  49627301 tgtgtttgtttcaaatttaccaaatttatttttaagaataacatttcttggaatataaagatgggaattttatt 49627374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 37726808 - 37726859
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttgg 266  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  37726808 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 37726859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 24116680 - 24116606
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||  |||||||||| || ||||||| |||||| ||||||||||||| ||||||||||    
T  24116680 gtgtgtttgttttaagtttaacaaatttattcttaagaataacattccttagaatataaagatgagaattttatt 24116606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 45771818 - 45771892
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||| | ||||||| || ||||||| |||||| || ||||||||||    
T  45771818 gtgtgtttgtttcaagtttaccaaatttattcccatgaataacctttcttggaacataaaggtgagaattttatt 45771892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 52186343 - 52186269
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||| ||||||| |||||||| |||||||||   ||||||||| |||||||||||||||||||| ||||||||||    
T  52186343 gtgtatttgttttaagtttaccaaatttattttaaggaataacattccttggaatataaagatgagaattttatt 52186269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 4683718 - 4683645
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||| ||||||||||||||  ||||||||| ||| ||||||| ||  |||||||||||||||||||||||||||    
T  4683718 tgtgattgtttcaagtttatcaaatttatttctaagaataacattttttggaatataaagatgggaattttatt 4683645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 35187180 - 35187256
Alignment:
Q  214 cgtgtgtttgtttcaa-gtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||| |||||| |||||||||| |||||||||  || |||| ||||||||||||| |||||||||    
T  35187180 cgtgtgtttgtttcaaagtttaccaaatttattcttaggaataatatttcttgaaatataaagatggaaattttatt 35187256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 13932218 - 13932144
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||| | ||||||||| ||| ||| ||||||||||||| || ||||||    
T  13932218 gtgtgtttgtttcaagtttatcaaatttatttcaaggaataacattcattgaaatataaagatggaaactttatt 13932144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 47677370 - 47677444
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||| ||| |||||||  |||||||||| |||||||||  || ||||||||||||||||| ||||||||||    
T  47677370 gtgtgtttatttaaagtttatgaaatttattcttaggaataaaatttcttggaatataaagatgagaattttatt 47677444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 29888660 - 29888564
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||||||  | || ||||||||| | || |||| |||||||||||||    
T  29888660 ttgagatgcaaaagatggcagtctatgaaccttaccatgacaacaagcagtacaaaaatctgataagcttttatttggtaattgtatattacaaagt 29888564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 52607509 - 52607605
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    ||||||||||||||| || |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  52607509 ttgagatgcaaaagaaggcagtctatgaaccttaccatgacaacaagcagtacagaaatctgacaagcttttatttggtaattttatattacaaagt 52607605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 17475655 - 17475581
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||| |||  ||||| ||||| |||| |||||||||    
T  17475655 gtgtgttcgtttcaagtttatcaaatttattcctaagaataacattctatggaaaataaaaatggaaattttatt 17475581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 37261546 - 37261619
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||  |||||||||  || || |||| ||| |||||||||||| ||| ||||||||||    
T  37261546 tgtgtttgtttcaagtttatcaaatttatttttatgattaacattcattggaatataaatatgtgaattttatt 37261619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 38519405 - 38519332
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||| ||||| |||||||||| |||||||||| ||  |||||| ||||| |||  |||||||||    
T  38519405 tgtgtttgtttcaaatttaccaaatttattcgtaggaataacattttttggaacataaaaatgaaaattttatt 38519332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 45813727 - 45813666
Alignment:
Q  228 aagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||  |||||||||| |||||||||| ||| ||| |||||||||||| ||||||||||    
T  45813727 aagtttatcaaatttattcttaggaataacattcattgaaatataaagatgtgaattttatt 45813666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 49824067 - 49824022
Alignment:
Q  217 gtgtttgtttcaagtttactaaatttattcctaggaataacgttcc 262  Q
    ||||||||||||||||||  ||||||||||||||||||||| ||||    
T  49824067 gtgtttgtttcaagtttatcaaatttattcctaggaataacattcc 49824022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 254 - 289
Target Start/End: Complemental strand, 49823203 - 49823168
Alignment:
Q  254 taacgttccttggaatataaagatgggaattttatt 289  Q
    |||| |||||||||||||||||||||||||||||||    
T  49823203 taacattccttggaatataaagatgggaattttatt 49823168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 3939227 - 3939301
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||  |||| ||||  |||||||||| ||| |||||||||||| | | ||||||||||    
T  3939227 gtgtgtttgttttaagtttatcaaatatatttttaggaataacattctttggaatataaaaaagtgaattttatt 3939301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 29888525 - 29888485
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  29888525 aagtctgctatgccagataccatacatggaaggaaaagact 29888485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 52607644 - 52607684
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  52607644 aagtctgctatgccagataccatacatggaaggaaaagact 52607684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 32661280 - 32661206
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32661280 gtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 32661206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 12710370 - 12710444
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12710370 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 12710444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 37392892 - 37392818
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37392892 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 37392818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 35818770 - 35818696
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  35818770 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 35818696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 38363806 - 38363880
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38363806 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 38363880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 10896560 - 10896488
Alignment:
Q  217 gtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  10896560 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 10896488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 18297837 - 18297911
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  18297837 gtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttatt 18297911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 25837636 - 25837710
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||||||||    
T  25837636 gtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttatt 25837710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 38133084 - 38133010
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  38133084 gtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttatt 38133010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 42755592 - 42755666
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  42755592 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatatgaagatgggaattttatt 42755666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 3049734 - 3049808
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  |||||||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  3049734 gtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttgaaatataaagatgggaattttatt 3049808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 7930964 - 7931038
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||| ||||||||||    
T  7930964 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattctttggaatataaagatgagaattttatt 7931038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 26061869 - 26061943
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  26061869 gtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttgtaatataaagatgagaattttatt 26061943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 40197396 - 40197325
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||| ||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  40197396 tgtttgcttcaagtttaccaaatttattcctaggaataatattctttggaatataaagatgggaattttatt 40197325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 16313853 - 16313779
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  |||||||||  |||||||||| |||||||||||||||||||| ||||||||||    
T  16313853 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttatt 16313779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 26602283 - 26602209
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| |||| |||||| ||||||| || ||||||||||||||||||||    
T  26602283 gtgtgtttgtttcaagtttaccaaatttattgctagaaataacattccttgaaacataaagatgggaattttatt 26602209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 1554692 - 1554626
Alignment:
Q  224 tttcaagtttactaaatttattcctaggaataacgttccttggaatat-aaagatgggaattttatt 289  Q
    |||||||||||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  1554692 tttcaagtttaccaaatttattcttaggaataacattccttggaatataaaagatgggaattttatt 1554626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 15226695 - 15226765
Alignment:
Q  219 gtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||| ||||| |||||||||  |||||||||| |||||||||||||||||||| ||||||||||    
T  15226695 gtttgtttcaattttaccaaatttattattaggaataactttccttggaatataaagatgagaattttatt 15226765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 16219287 - 16219213
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||   |||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  16219287 gtgtgtttgttttaagtttatccaatttattcctaggaataacgttccttggaacttaaagatgagaattttatt 16219213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 18726966 - 18726892
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||  ||||||||||||||||  |||||||||    
T  18726966 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattaattggaatataaagatgaaaattttatt 18726892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 25899384 - 25899458
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||| ||  |||||||||  |||||||||| ||||||||||||||||||| |||||||||||    
T  25899384 gtgtgtttgtttcaagtgtaacaaatttatttttaggaataacattccttggaatataaagataggaattttatt 25899458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 5020837 - 5020763
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  |||||||||  |||||||||| ||| ||||||||||||||||  |||||||||    
T  5020837 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacattctttggaatataaagatgataattttatt 5020763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 31117872 - 31117798
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||   |||||||||| ||| |||||||||||||||| ||||||||||    
T  31117872 gtgtgtttgtttcaagtttatcaaatttatatttaggaataacattcattggaatataaagatgagaattttatt 31117798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 33444968 - 33444894
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||||| ||||||||| || ||||||| || | |||||||||||||||  |||||||||    
T  33444968 gtgtgtttgtttcaagtttactgaatttattcataagaataacatttcatggaatataaagatgaaaattttatt 33444894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 33533738 - 33533664
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||   |||||||||||||||||||   |||||| ||||||||||||| ||||||||||    
T  33533738 gtgtgtttgtttcaagtttgtcaaatttattcctaggaatattattcctttgaatataaagatgtgaattttatt 33533664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 43872311 - 43872237
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||| | ||||||||| ||||||||||| ||||||| |||||| |||||  |||||||||    
T  43872311 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttatt 43872237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 23927431 - 23927527
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  23927431 ttgagatgcaaaagatggcagtctatgaaccttaccatgacaacaagcagtacagaaatctgacaagcttttatttggtaattttatattacaaagt 23927527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 44199720 - 44199624
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  44199720 ttgagatgcaaaagatggcagtctatgaaccttaccatgacaacaagcagtacagaaatctgacaagcttttatttggtaattttatattacaaagt 44199624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 37982133 - 37982063
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaatttt 286  Q
    ||||||||||||||||||||| |||||||||  |||||||||| |||||| ||| ||||||||| |||||||    
T  37982133 gtgtgtttgtttcaagtttaccaaatttatttttaggaataacattcctt-gaacataaagatgagaatttt 37982063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 12649860 - 12649934
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||| |||||||  |||||| |||| || |||| ||||||||||    
T  12649860 gtgtgtttgtttcaagtttaccaaatttatttctacgaataacaatccttgtaatacaatgatgtgaattttatt 12649934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 19161087 - 19161013
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||  | ||||||| ||| |||||||||||||||| ||| ||||||    
T  19161087 gtgtgtttgtttcaagtttatcaaatttattctcaagaataacattctttggaatataaagatgagaaatttatt 19161013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 41432464 - 41432538
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||  |||||||||  |||||||||| || |||| || |||||||||| |||||||||    
T  41432464 gtgtgtttgttttaagtttatcaaatttatttttaggaataacatttcttgaaacataaagatggaaattttatt 41432538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 21137478 - 21137403
Alignment:
Q  213 ccgtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||  ||||||  ||||||||| |||| |||||| ||  |||||||||||||||| ||||||||||    
T  21137478 ccgtgtgtttgtttttagtttatcaaatttattactag-aataacattttttggaatataaagatgagaattttatt 21137403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 35394083 - 35394139
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatat 271  Q
    ||||||||||||||||||||  |||||||||| ||| |||||| ||| |||||||||    
T  35394083 gtgtgtttgtttcaagtttatcaaatttattcttagtaataacattctttggaatat 35394139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 254
Target Start/End: Complemental strand, 41229015 - 41228976
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaat 254  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  41229015 gtgtgtttgtttcaagtttaccaaatttattccaaggaat 41228976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 6805936 - 6805898
Alignment:
Q  251 gaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  6805936 gaataacattccttgaaatataaagatgggaattttatt 6805898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 23927566 - 23927606
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  23927566 aagtctgctatgccagataccatacatggaaggaaaagact 23927606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 44199585 - 44199545
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  44199585 aagtctgctatgccagataccatacatggaaggaaaagact 44199545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 48160919 - 48160845
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  48160919 gtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 48160845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 27214201 - 27214127
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27214201 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 27214127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 33378559 - 33378633
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33378559 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 33378633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 34930813 - 34930739
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34930813 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 34930739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 35488535 - 35488461
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35488535 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 35488461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 11329718 - 11329792
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  11329718 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 11329792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 28904532 - 28904458
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  28904532 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 28904458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 43948970 - 43949044
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43948970 gtgtatttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 43949044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 45265394 - 45265320
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45265394 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 45265320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 45448667 - 45448741
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  45448667 gtgtgtttgtttcaagtttaccaaatttattcctatgaataacattccttggaatataaagatgggaattttatt 45448741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 27248019 - 27248092
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  27248019 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttatt 27248092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 9947337 - 9947263
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  9947337 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgtaatataaagatgggaattttatt 9947263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 44565770 - 44565844
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  44565770 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatggaaattttatt 44565844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 48341089 - 48341162
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  48341089 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaaga-gggaattttatt 48341162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 45045352 - 45045425
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||| |||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  45045352 tgtgtttgtttcaagtttaccaaatttattcttaggaataatattccttggaatataaagatgggaattttatt 45045425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 18823890 - 18823961
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| ||||||||||    
T  18823890 tgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttatt 18823961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 25924983 - 25924909
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||| |||||| ||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  25924983 gtgtgtttgtttcatgtttaccaaatttattcctaagaataacattccttggaatataaagatgagaattttatt 25924909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 27419570 - 27419496
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||  |||||||||| || ||||||||||||||||||||||||||||    
T  27419570 gtgtgtttgtttcaagtttaccaaatttatttttaggaataacatttcttggaatataaagatgggaattttatt 27419496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 38543920 - 38543993
Alignment:
Q  217 gtgtttgtttcaa-gtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  38543920 gtgtttgtttcaaagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttatt 38543993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 48313847 - 48313921
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||| ||||||||||| || ||||||||||||||||| ||||||||||    
T  48313847 gtgtgtttgtttcaagtttatcaaatttatttctaggaataacatttcttggaatataaagatgagaattttatt 48313921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 37534447 - 37534374
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||  ||||||||| |||| |||||| |||||||||||||||||||| ||||||||||    
T  37534447 tgtgtttgtttcaagtttatcaaatttatttctagaaataacattccttggaatataaagatgagaattttatt 37534374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 39553910 - 39553981
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||| |||||||  |||||||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  39553910 tgtttgtttgaagtttatcaaatttattcttagtaataacattccttggaatataaagatgggaattttatt 39553981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 17276505 - 17276431
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||| |||||||||||||| |||||  |||||||||    
T  17276505 gtgtgtttgtttcaattttacaaaatttatttctaggaataacattccttggaatatatagatgtaaattttatt 17276431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 30686336 - 30686263
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||| |||||||  ||||||||| ||||||||||| ||||||||||||||||||||  |||||||||    
T  30686336 tgtgtttgttttaagtttatcaaatttatttctaggaataacattccttggaatataaagatgaaaattttatt 30686263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 44819981 - 44820053
Alignment:
Q  217 gtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||| |||||||||  |||||||||| ||||||  |||||||||||| ||||||||||    
T  44819981 gtgtttgtttcaagtttaccaaatttatttttaggaataacattccttaaaatataaagatgagaattttatt 44820053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 6656817 - 6656742
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaat-aacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||| |||||||||||| ||| ||| ||||||||||    
T  6656817 gtgtgtttctttcaagtttactaaatttattcttaggaataaacattccttggaatagaaatatgagaattttatt 6656742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 38396711 - 38396638
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||| | ||| ||||||||| ||||| |||||||||||    
T  38396711 gtgtgtttgtttcaagtttatcaaatttattcctaggaatagcattcattggaatat-aagataggaattttatt 38396638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 41632705 - 41632636
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||     |||||| |||||| ||||||||||||||||||||||||    
T  41632705 gtgtgtttgtttcaagtttaccaaatttattc-----aataacattcctttgaatataaagatgggaattttatt 41632636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 45722884 - 45722958
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||| ||| |||||||||||| |||||||||  |||||||||| ||||||| ||||||||||||| |||||||||    
T  45722884 gtgtctttatttcaagtttaccaaatttatttttaggaataacattccttgaaatataaagatggaaattttatt 45722958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 16916231 - 16916182
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttcctt 264  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  16916231 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattcctt 16916182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 31598449 - 31598522
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||| |||||||| |||||||||  | |||||||| || |||||||||||||||| |||||||||||    
T  31598449 tgtgtttgttttaagtttaccaaatttatttttgggaataacatttcttggaatataaagataggaattttatt 31598522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 3716693 - 3716789
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| |||| |  |||||  |||||||||| |||||||  | |||||||||||||| || |||| |||||||||||||    
T  3716693 ttgagatgcaaaagatggcagtctatgagccttaccatgacaacaagcagtacaaaaatctgacaagcttttaattggtaattgtatattacaaagt 3716789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 48511898 - 48511994
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  48511898 ttgagatgcaaaagatggcagtctatgaaccttaccatgacaacaagcagtacagaaatctgacaagcttttatttggtaattttatattacaaagt 48511994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 48726340 - 48726436
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  48726340 ttgagatgcaaaagatggcagtctatgaaccttaccatgacaacaagcagtacagaaatctgacaagcttttatttggtaattttatattacaaagt 48726436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 25097796 - 25097868
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataa-cgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||| |||||||| ||||||||||||||||||||   ||  |||||||||||||||| ||||||||||    
T  25097796 tgtttgttttaagtttaccaaatttattcctaggaataatatttttttggaatataaagatgagaattttatt 25097868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 40212629 - 40212669
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaata 255  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  40212629 gtgtgtttgtttcaagtttaccaaatttattcctaggaata 40212669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 42106969 - 42106873
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||  |||| ||||||  |||||  |||||||||| |||||||  | |||||||||||| | || |||| |||||||||||||    
T  42106969 ttgagatgcaaaagatgacagtctatgaaccttaccatgacaacaagcagtacaaaaatctgacaagcttttatttggtaattgtatattacaaagt 42106873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 289
Target Start/End: Complemental strand, 8419900 - 8419861
Alignment:
Q  250 ggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  8419900 ggaataacattccttggaatataaagatgggaattttatt 8419861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 31922072 - 31922006
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatggga 281  Q
    ||||||||||||||||||||  ||||||||| | | ||||||| ||| |||||||||||| ||||||    
T  31922072 gtgtgtttgtttcaagtttatcaaatttattaccatgaataacattctttggaatataaatatggga 31922006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 9814535 - 9814486
Alignment:
Q  240 tttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||| || |||||||||||||||||  |||||||||    
T  9814535 tttattcctaggaataacatttcttggaatataaagatgacaattttatt 9814486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 5543476 - 5543402
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||| ||||||||| ||| ||||| | ||  ||| || ||||||||| ||||||||||    
T  5543476 gtgtgtttgttttaagtttaccaaatttatttctaagaatatcattatttgaaacataaagatgagaattttatt 5543402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 22156520 - 22156450
Alignment:
Q  219 gtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||| ||||  |||||||||  |||||||||| ||  |||||||||||||||  ||||||||||    
T  22156520 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttatt 22156450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 22212435 - 22212365
Alignment:
Q  219 gtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||| ||||  |||||||||  |||||||||| ||  |||||||||||||||  ||||||||||    
T  22212435 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttatt 22212365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 40385973 - 40385899
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||| | |||||||| ||  |||||||||| ||| |||||| ||  |||||||||||||||| ||||||||||    
T  40385973 gtgtgtctctttcaagtgtatcaaatttattcttagtaataacattttttggaatataaagatgagaattttatt 40385899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 48512033 - 48512073
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  48512033 aagtctgctatgccagataccatacatggaaggaaaagact 48512073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 48726475 - 48726515
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  48726475 aagtctgctatgccagataccatacatggaaggaaaagact 48726515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 27555156 - 27555230
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27555156 gtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 27555230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 13230335 - 13230261
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13230335 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 13230261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 45748141 - 45748067
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45748141 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 45748067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 47670091 - 47670165
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  47670091 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 47670165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 55968346 - 55968272
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  55968346 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 55968272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 41859392 - 41859318
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  41859392 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 41859318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 43722993 - 43723067
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  43722993 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttatt 43723067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 45595997 - 45596071
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  45595997 gtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttatt 45596071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 48873750 - 48873824
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  48873750 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattatt 48873824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 48879054 - 48879128
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  48879054 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattatt 48879128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 18405579 - 18405505
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  18405579 gtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatggaaattttatt 18405505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 23686516 - 23686590
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  23686516 gtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgaaatataaagatgggaattttatt 23686590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 25932170 - 25932244
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  25932170 gtgtgtttgtttcaagtttcccaaatttattcctaggaataacattccttgaaatataaagatgggaattttatt 25932244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 27763245 - 27763171
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  27763245 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagataggaattttatt 27763171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 39730639 - 39730565
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  39730639 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 39730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 39835653 - 39835579
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||||||||    
T  39835653 gtgtgtttgtttcaagtttaccaaatttatttctatgaataacattccttggaatataaagatgggaattttatt 39835579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 40435629 - 40435703
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||||||||    
T  40435629 gtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttatt 40435703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 48519233 - 48519163
Alignment:
Q  219 gtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  48519233 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgtgaattttatt 48519163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 42773679 - 42773751
Alignment:
Q  217 gtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  42773679 gtgtttgtttcaagtttaccaaatttattcctagaaataacattccttggagtataaagatgggaattttatt 42773751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 35999418 - 35999489
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||| |||||||||| || ||||||| |||||||||||||||||||||||||||||||    
T  35999418 tgtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaagatgggaattttatt 35999489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 6280267 - 6280193
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| || |||||||||||    
T  6280267 gtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaaaataggaattttatt 6280193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 36860102 - 36860028
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||| |||||||||    
T  36860102 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaacataaaaatggaaattttatt 36860028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 41744567 - 41744493
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||| ||||||||||    
T  41744567 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattcattggaatataaagatgagaattttatt 41744493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 935855 - 935929
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| || ||||||| || |||||||||||||||| |||||||||||    
T  935855 gtgtgtttgtttcaagtttaccaaatttattcttaagaataacatttcttggaatataaagataggaattttatt 935929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 7258693 - 7258767
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||  ||||||||| |||||||||||||||| ||||||||||||||    
T  7258693 gtgtgtttgtttcaagtttatcaaatttattctcaggaataacattccttggaatataaatatgggaattttatt 7258767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 8321974 - 8322048
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||  |||||||||| ||| |||||||||||||||| ||||||||||    
T  8321974 gtgtgtttgtttcaagtttaccaaatttatttttaggaataacattctttggaatataaagatgagaattttatt 8322048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 34238295 - 34238226
Alignment:
Q  220 tttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||  |||||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  34238295 tttgtttcaagtttatcaaatttattcataggaataacattccttggaatataaagatgagaattttatt 34238226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 50673245 - 50673176
Alignment:
Q  220 tttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  50673245 tttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagatgagaattttatt 50673176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 18931482 - 18931556
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||  |||||||||| |||||||||| ||||||||||||||||||| | |||||||||    
T  18931482 gtgtgtttgttttaagtttatcaaatttattcttaggaataacattccttggaatataaagatagaaattttatt 18931556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 27942466 - 27942540
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||  | |||||||||| ||| ||||||||||    
T  27942466 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacatttttaggaatataaatatgagaattttatt 27942540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 31938215 - 31938141
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  |||||||||| |||||||||| ||||||||||| ||||||||  |||||||||    
T  31938215 gtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttggaatttaaagatgaaaattttatt 31938141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 51968508 - 51968582
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| | |  |||||||| ||||||||||    
T  51968508 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttcgtacgtaaagatgagaattttatt 51968582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 18405132 - 18405200
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaat 283  Q
    |||||||||||| |||||| | |||||||||| |||||||||| ||||||| |||||||||||||||||    
T  18405132 gtgtgtttgttttaagtttgccaaatttattcttaggaataacattccttgaaatataaagatgggaat 18405200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 25916359 - 25916302
Alignment:
Q  215 gtgtgtttgtttc-aagtttactaaatttattcctaggaataacgttccttggaatat 271  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  25916359 gtgtgtttgtttctaagtttaccaaatttattcctaggaataacattccttggaatat 25916302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 37014724 - 37014655
Alignment:
Q  220 tttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||| ||||||||||||| ||||||  ||  |||||||||||||||| ||||||||||    
T  37014724 tttgtttcaagtttacaaaatttattcctaagaataatattttttggaatataaagatgcgaattttatt 37014655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 38413907 - 38413975
Alignment:
Q  217 gtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattt 285  Q
    ||||||||||||||||||| ||||||| |  ||| |||||| |||||||||||||||||||| ||||||    
T  38413907 gtgtttgtttcaagtttaccaaatttaattttagaaataacattccttggaatataaagatgagaattt 38413975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 32953255 - 32953326
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||   |||||||| |||| |||||  ||| |||||||||||||||||||||||||||    
T  32953255 tgtttgtttcaagtttatctaatttatttctagaaataatattcattggaatataaagatgggaattttatt 32953326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 30790277 - 30790350
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||| |||||| |||| || ||||||||||||||||| ||| ||||||    
T  30790277 gtgtgtttgtttcaagtttagcaaatttatttctaggagtaacatt-cttggaatataaagatgagaaatttatt 30790350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 12276250 - 12276182
Alignment:
Q  220 tttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||||||||  |||||||||| ||  || ||||||||||||| ||||||||||    
T  12276250 tttgtttcaagtttactaaatttatttataggaataacatt-ttttgaatataaagatgtgaattttatt 12276182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 52413959 - 52414030
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||| ||||| ||||| |||||||||| ||| ||||||   |||||||||||||||||| ||||||||||    
T  52413959 tgtttgcttcaaatttaccaaatttattcttagaaataacaacccttggaatataaagatgtgaattttatt 52414030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 52469427 - 52469500
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttcc-ttggaatataaagatgggaattttat 288  Q
    ||||||||||| ||||| |  |||||||||| |||||||||| |||| ||||||||||||||| | ||||||||    
T  52469427 tgtgtttgttttaagttaatcaaatttattcttaggaataacattcctttggaatataaagattgaaattttat 52469500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 254 - 289
Target Start/End: Complemental strand, 34049904 - 34049869
Alignment:
Q  254 taacgttccttggaatataaagatgggaattttatt 289  Q
    |||| |||||||||||||||||||||||||||||||    
T  34049904 taacattccttggaatataaagatgggaattttatt 34049869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 10401126 - 10401052
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||| ||||||||| || | |||||| ||| ||| | |||||| ||| ||||||||||    
T  10401126 gtgtgtttgttttaagtttaccaaatttatttctggaaataacattctttgaagtataaaaatgagaattttatt 10401052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 36858137 - 36858207
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattt 285  Q
    ||||| ||||| ||||||||  |||||||||| || ||||||| ||||||| |||| | ||||||||||||    
T  36858137 gtgtgcttgttacaagtttataaaatttattcttaagaataacattccttgtaatacacagatgggaattt 36858207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 38394636 - 38394710
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||| || |||  || ||| ||| ||||| ||| ||||||||||    
T  38394636 gtgtgtttgtttcaagtttaccaaatttatttctaagactaatatttcttagaacataaatatgagaattttatt 38394710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 39498590 - 39498628
Alignment:
Q  251 gaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  39498590 gaataacattccttggaatataaagatgagaattttatt 39498628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 39501929 - 39501967
Alignment:
Q  251 gaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  39501929 gaataacattccttggaatataaagatgagaattttatt 39501967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 30415706 - 30415746
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataa 256  Q
    ||||||||||| ||| ||||||||||||||| |||||||||    
T  30415706 tgtgtttgtttgaagattactaaatttattcttaggaataa 30415746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 37233152 - 37233229
Alignment:
Q  212 accgtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37233152 accgtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 37233229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 346691 - 346617
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  346691 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 346617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 6171516 - 6171590
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6171516 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 6171590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 23943888 - 23943962
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23943888 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 23943962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 28312043 - 28311968
Alignment:
Q  214 cgtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  28312043 cgtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaagatgggaattttatt 28311968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 14777844 - 14777770
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14777844 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 14777770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 17965708 - 17965782
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  17965708 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttatt 17965782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 20426828 - 20426754
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20426828 gtgtgtttgtttaaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 20426754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 37533678 - 37533752
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||    
T  37533678 gtgtgtttgtttcaagtttactaaatttatttctaggaataacattccttggaataaaaagatgggaattttatt 37533752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 41729476 - 41729402
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  41729476 gtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttatt 41729402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 26309993 - 26310066
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  26309993 tgtgtttgtttcaagtttaccaaatttattcctaggaatagcattccttggaatataaagatgggaattttatt 26310066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 638319 - 638393
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||| || |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  638319 gtgtgtttgatttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 638393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 4559284 - 4559358
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||||||||    
T  4559284 gtgtgtttgtttcaagtttaccaaatttatttctaagaataacattccttggaatataaagatgggaattttatt 4559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 11071330 - 11071404
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  11071330 gtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgggaattttatt 11071404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 13760692 - 13760766
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||| | ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  13760692 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttggaatataaagatgggaattttatt 13760766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 37192247 - 37192321
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  37192247 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttatt 37192321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 42675007 - 42674933
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||| |||||||||||    
T  42675007 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacatttcttggaatataaagataggaattttatt 42674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 21737753 - 21737680
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  21737753 tgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttatt 21737680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 9734190 - 9734118
Alignment:
Q  217 gtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  9734190 gtgtttgttttaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttatt 9734118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 2050591 - 2050665
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  |||||||||  |||||||||| |||||||||||||||||||||||||||||||    
T  2050591 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttatt 2050665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 5770456 - 5770382
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||    
T  5770456 gtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagataggaattttatt 5770382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 1623078 - 1623151
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||||| ||||||||||    
T  1623078 tgtgtttgtttcaattttactaaatttattcctagtaataacatttcttggaatataaagatgagaattttatt 1623151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 45693915 - 45693988
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ||||||||||    
T  45693915 tgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaacataaagatgagaattttatt 45693988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 40951202 - 40951131
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||  |||||||||    
T  40951202 tgtttgtttcaaatttaccaaatttattcctaggaataacattccttggaatataaagatgaaaattttatt 40951131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 3902182 - 3902256
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| | |||||||  |||||||||| ||||||| |||||||||||||||||||||||    
T  3902182 gtgtgtttgtttcaagtttaccatatttatttttaggaataacattccttgaaatataaagatgggaattttatt 3902256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 39819415 - 39819489
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||| ||||| |||||||||| |||||||||| ||| ||||||||||||||||| |||||||||    
T  39819415 gtgtgtttgtttcaaatttaccaaatttattcataggaataacattctttggaatataaagatggaaattttatt 39819489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 11763737 - 11763672
Alignment:
Q  224 tttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  11763737 tttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttatt 11763672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 5003181 - 5003107
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| || ||||| |||||||||  |||||||||| |||||||||||||||||||| ||||||||||    
T  5003181 gtgtgtttgtttaaaatttaccaaatttatttataggaataacattccttggaatataaagatgcgaattttatt 5003107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 40569743 - 40569817
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||| | |||  |||||||||    
T  40569743 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatatatatatgtaaattttatt 40569817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 2521381 - 2521434
Alignment:
Q  220 tttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataa 273  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  2521381 tttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataa 2521434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 27358303 - 27358234
Alignment:
Q  220 tttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||| |||||||| ||||||||||||||||||||| ||  |||||||||||||||| ||||||||||    
T  27358303 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttatt 27358234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 45408981 - 45409050
Alignment:
Q  220 tttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||| |||||||| ||||||||||||||||||||| ||  |||||||||||||||| ||||||||||    
T  45408981 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttatt 45409050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 41750276 - 41750328
Alignment:
Q  237 aaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  41750276 aaatttattcctaggaataacattccttgaaatataaagatgggaattttatt 41750328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 7007310 - 7007384
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||| |||||||||  |||||||||| || |||| |||||||||||| ||||||||||    
T  7007310 gtgtgtttgttttaagtttaccaaatttattattaggaataacatttcttgaaatataaagatgagaattttatt 7007384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 18714002 - 18713928
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||| |||||| |||| |||||||||  |||||||||| |||||||||||||||||||| |||| |||||    
T  18714002 gtgtgtttgattcaagcttaccaaatttatttataggaataacattccttggaatataaagatgagaatattatt 18713928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 3254437 - 3254364
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||| |||||||| |||||||||  |||||||||| ||| |||||||||||| ||| ||||||||||    
T  3254437 tgtgtttgttttaagtttaccaaatttatttttaggaataacattctttggaatataaaaatgagaattttatt 3254364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 12506543 - 12506447
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  12506543 ttgagatgcaaaagatggcagtctatgaaccttaccatgacaacaagcagtacagaaatctgacaagcttttatttggtaattttatattacaaagt 12506447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 14679383 - 14679479
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  14679383 ttgagatgcaaaagatggcagtctatgaaccttaccatgacaacaagcagtacagaaatctgacaagcttttatttggtaattttatattacaaagt 14679479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 14832536 - 14832610
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| | | ||||||| ||||||  ||||||||||||  |||||||||    
T  14832536 gtgtgtttgtttcaagtttaccaaatttatttccaagaataacattccttaaaatataaagatgataattttatt 14832610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 4875506 - 4875575
Alignment:
Q  220 tttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||   |||||||||| |||||||||  ||| |||||||||||||||| ||||||||||    
T  4875506 tttgtttcaagtttgtcaaatttattcttaggaataatattctttggaatataaagatgtgaattttatt 4875575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 25724753 - 25724825
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaag-atgggaattttatt 289  Q
    |||||||||||||||||||| ||||||||| | ||||||| ||||||||||| ||| | |||||| |||||||    
T  25724753 tgtttgtttcaagtttactagatttattcccaagaataactttccttggaatttaaggaatgggagttttatt 25724825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 39589129 - 39589033
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||||||  | |||||||| ||| | || |||| |||||||||||||    
T  39589129 ttgagatgcaaaagatggcagtctatgaaccttaccatgacaacaagcagtacaaaaatccgacaagctcttatttggtaattgtatattacaaagt 39589033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 13790018 - 13790089
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||  |||||||||  |||||||||| ||||||| |||||| |||||  |||||||||    
T  13790018 tgtttgtttcaagtttatcaaatttatttgtaggaataacattccttgaaatatatagatgtaaattttatt 13790089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 14253254 - 14253325
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||| || ||||| |||||||||  |||||||||| ||| ||||||||||| |||| ||||||||||    
T  14253254 tgtttgttttaaatttaccaaatttatttttaggaataacattctttggaatataaggatgagaattttatt 14253325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 8868980 - 8868938
Alignment:
Q  220 tttgtttcaagtttactaaatttattcctaggaataacgttcc 262  Q
    |||||||||||||||||||||||||||||| ||||||| ||||    
T  8868980 tttgtttcaagtttactaaatttattcctacgaataactttcc 8868938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 36590915 - 36590862
Alignment:
Q  219 gtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatata 272  Q
    |||||||| ||||||||||||||||||  |||||||||| ||| ||||||||||    
T  36590915 gtttgttttaagtttactaaatttatttttaggaataacattcgttggaatata 36590862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 41298255 - 41298186
Alignment:
Q  220 tttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||| |||| ||  |||||||||  |||||||||| ||| |||||||||||||||| ||||||||||    
T  41298255 tttgttttaagtatatcaaatttatttttaggaataacattcattggaatataaagatgagaattttatt 41298186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 2521434 - 2521474
Alignment:
Q  249 aggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  2521434 aggaataacattccttggaatataaagatggaaattttatt 2521474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 13539399 - 13539468
Alignment:
Q  220 tttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||| |||||||||  | |  ||||| || ||||||| ||||||||| ||||||||||    
T  13539399 tttgtttcaagtttaccaaatttatttttggtgataacatttcttggaacataaagatgagaattttatt 13539468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 12506408 - 12506368
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  12506408 aagtctgctatgccagataccatacatggaaggaaaagact 12506368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 14679518 - 14679558
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  14679518 aagtctgctatgccagataccatacatggaaggaaaagact 14679558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 34357022 - 34356971
Alignment:
Q  237 aaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||| |||||||| | ||||||||||||| ||||| |||||||||||    
T  34357022 aaatttattcttaggaatagcattccttggaatat-aagataggaattttatt 34356971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 67; Significance: 8e-30; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 201651 - 201725
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  201651 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 201725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 143342 - 143409
Alignment:
Q  219 gtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaatttt 286  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  143342 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttt 143409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 119051 - 119122
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||| || |||||||| |||||||||| ||  |||||| ||| |||||||||||||||| ||||||||||    
T  119051 tgtttgctttaagtttaccaaatttattcttaaaaataacattcattggaatataaagatgtgaattttatt 119122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 8e-30; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 10246462 - 10246388
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10246462 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 10246388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 2657425 - 2657499
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2657425 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 2657499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 8029028 - 8029102
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  8029028 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatggaaattttatt 8029102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 14170740 - 14170814
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  14170740 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttatt 14170814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 18897646 - 18897720
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18897646 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 18897720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 1316744 - 1316818
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| ||||||||||    
T  1316744 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttatt 1316818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 7053924 - 7053850
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  7053924 gtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttatt 7053850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 16968650 - 16968724
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||| ||||||||||| ||| |||||||||||||||| ||||||||||    
T  16968650 gtgtgtttgtttcaagtttatcaaatttatttctaggaataacattctttggaatataaagatgagaattttatt 16968724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 6706095 - 6706024
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||| || |||||| ||||||||||| ||||||| |||||||||||| ||||||||||    
T  6706095 tgtttgtttcaagtttaccaattttatttctaggaataacattccttgaaatataaagatgagaattttatt 6706024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 11570130 - 11570071
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaa 274  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  11570130 gtgtctttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaa 11570071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 9762392 - 9762312
Alignment:
Q  209 ctaaccgtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||| ||||||||||||||||||||| || ||||||  |||||||||| ||||||||| |||||| ||| ||||||||||    
T  9762392 ctaacggtgtgtttgtttcaagtttaccaagtttattattaggaataacattccttggattataaatatgtgaattttatt 9762312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 21008322 - 21008251
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||| ||||||||||  || ||||||| || ||||||||||||||||| ||||||||||    
T  21008322 tgtttgtttcaagtttattaaatttatttttatgaataacatttcttggaatataaagatgagaattttatt 21008251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 7344827 - 7344766
Alignment:
Q  228 aagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  7344827 aagtttatcaaatttattcctaggaataacattccttggaatataaatatgagaattttatt 7344766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 14781955 - 14781882
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||  ||||| |||||||||||| |||||||| ||| |||||| ||||||||| ||||||||||    
T  14781955 gtgtgtttgtttcat-tttaccaaatttattcctgggaataacattcattggaacataaagatgagaattttatt 14781882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 29653597 - 29653501
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    ||||||||||||||| || |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  29653597 ttgagatgcaaaagaaggcagtctatgaaccttaccatgacaacaagcagtacagaaatctgacaagcttttatttggtaattttatattacaaagt 29653501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 3869223 - 3869295
Alignment:
Q  217 gtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||| || ||||||||| | ||||||| ||||| | ||||||| |||| || |||||||    
T  3869223 gtgtttgtttcaagtttagtagatttattcccaagaataactttcctggaaatataaggatgagagttttatt 3869295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 29653462 - 29653422
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  29653462 aagtctgctatgccagataccatacatggaaggaaaagact 29653422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 556052 - 555978
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  556052 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 555978  T

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Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 22936258 - 22936184
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22936258 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 22936184  T

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Target: chr5; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 29543361 - 29543287
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29543361 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 29543287  T

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Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 8646735 - 8646662
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  8646735 tgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagataggaattttatt 8646662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 19065850 - 19065777
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19065850 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 19065777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 4765906 - 4765832
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  4765906 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 4765832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 6091440 - 6091514
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  6091440 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 6091514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 11856001 - 11855927
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  11856001 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 11855927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 18411934 - 18412008
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  18411934 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 18412008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 27481082 - 27481156
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  27481082 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 27481156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 32535662 - 32535734
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaatttta 287  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  32535662 gtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaatttta 32535734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 8406619 - 8406693
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  8406619 gtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttatt 8406693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 14207167 - 14207093
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| ||||||||||    
T  14207167 gtgtgtttgtttcaagtttacaaaatttattcctaggaataacattcattggaatataaagatgagaattttatt 14207093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 16721029 - 16720958
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||||||    
T  16721029 tgtttgtttcaagtttactaaatttattcctaggaataacattcattggaatataaaaatgtgaattttatt 16720958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 12970876 - 12970802
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  12970876 gtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttatt 12970802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 28602281 - 28602355
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||||| |||||||||||    
T  28602281 gtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagataggaattttatt 28602355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 26637367 - 26637293
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||| |||||||||||  |||||||||  |||||||||| |||||||||||||||||||||||||||||||    
T  26637367 gtgtgtttatttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttatt 26637293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 28429453 - 28429527
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| |||| |||||| ||||||| |||||||||||| ||||||||||    
T  28429453 gtgtgtttgtttcaagtttaccaaatttatttctagaaataacattccttgaaatataaagatgtgaattttatt 28429527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 36703507 - 36703581
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||| ||||| |||||||||| |||||||||| ||||||||||| |||||||| ||||||||||    
T  36703507 gtgtgtttgtttcaaatttaccaaatttattcataggaataacattccttggaatttaaagatgagaattttatt 36703581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 42012535 - 42012459
Alignment:
Q  210 taaccgtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaatttt 286  Q
    |||| |||||||||||||||||||||||||||||||  |||||||||| ||  |||||||| |||||||||||||||    
T  42012535 taacagtgtgtttgtttcaagtttactaaatttatttttaggaataacattttttggaataaaaagatgggaatttt 42012459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 1664456 - 1664530
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||  ||||||  || |||| |||||||||||| ||||||||||    
T  1664456 gtgtgtttgtttcaagtttaccaaatttattcctgagaataatatttcttgaaatataaagatgagaattttatt 1664530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 20962286 - 20962356
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaatttt 286  Q
    ||||||||||| |||||||  |||||||||| |||||||||| |||||||||| |||||||||| ||||||    
T  20962286 tgtgtttgttttaagtttatcaaatttattcataggaataacattccttggaacataaagatggaaatttt 20962356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 43347240 - 43347166
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||| | |||||||||| |||||||||| ||  |||||||||||||||| ||| ||||||    
T  43347240 gtgtgtttgtttcaagttttcgaaatttattcttaggaataacatttattggaatataaagatgagaagtttatt 43347166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 36978478 - 36978405
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||| ||||||||||  |||||||||| ||| || ||||||||| ||| ||||||||||    
T  36978478 tgtgtttgtttcaagtttattaaatttatttataggaataacattctttagaatataaatatgagaattttatt 36978405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 23197168 - 23197264
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||||||  | |||||||||||| | || |||| |||||||||||||    
T  23197168 ttgagatgcaaaagatggtagtctatgaaccttaccaagacaacaagcattacaaaaatctgacaagcttttatttggtaattgtatattacaaagt 23197264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 36664348 - 36664252
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  36664348 ttgagatgcaaaagatggcagtctatgaaccttaccatgacaacaagcagtacagaaatctgacaagcttttatttggtaattttatattacaaagt 36664252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 40276586 - 40276524
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatg 278  Q
    |||||||||||||||||||||||||||||||| | | |||||| |||||| |||||||||||||    
T  40276586 gtgtgtttgtttcaagtttactaaatttattcttggtaataacattcctt-gaatataaagatg 40276524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 6930367 - 6930441
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||  |||||||||| || ||||||| ||||||| ||||| |||||| ||||||||||    
T  6930367 gtgtgtttgttttaagtttatcaaatttattcatatgaataacattccttgaaatatcaagatgagaattttatt 6930441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 31583404 - 31583331
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||| |||||||||||||||||| ||| ||||||| ||| ||| || |||||||||| ||| |||||    
T  31583404 tgtgtttgttttaagtttactaaatttatttctacgaataacattctttgaaacataaagatggaaatattatt 31583331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 36677429 - 36677525
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    ||||||||||||||| || |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  36677429 ttgagatgcaaaagaaggcagtctatgaaccttaccatgacaacaagcagtacagaaatctgacaagcttttatttggtaattttatattacaaagt 36677525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 43561861 - 43561765
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||||||  | |||||||||||| | || |||| ||| |||||||||    
T  43561861 ttgagatgcaaaagatggcagtctatgaaccttaccaagacaacaagcagtacaaaaatctgacaagcttttatttggtaattgtatgttacaaagt 43561765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 17251539 - 17251609
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaatttt 286  Q
    ||||||||||||||| ||||| |||||||||||||  |||||| || |||||||||||| ||| ||||||||    
T  17251539 gtgtgtttgtttcaaatttaccaaatttattccta-caataacatttcttggaatataaggataggaatttt 17251609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 27480736 - 27480810
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||| ||| |||||||| |||||||||  |||||||||  || |||| |||||||||||| ||||||||||    
T  27480736 gtgtgtttattttaagtttaccaaatttatttttaggaataatatttcttgaaatataaagatgagaattttatt 27480810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 36664213 - 36664173
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  36664213 aagtctgctatgccagataccatacatggaaggaaaagact 36664173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 36677564 - 36677604
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  36677564 aagtctgctatgccagataccatacatggaaggaaaagact 36677604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 8e-30; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 20414811 - 20414737
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20414811 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 20414737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 47115202 - 47115129
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  47115202 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 47115129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 1098924 - 1098998
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  1098924 gtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttatt 1098998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 11239466 - 11239392
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  11239466 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 11239392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 26848747 - 26848821
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  26848747 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 26848821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 33218259 - 33218185
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  33218259 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatt 33218185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 40907991 - 40908065
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  40907991 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgaaatataaagatgggaattttatt 40908065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 43132502 - 43132428
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  43132502 gtgtgtttgtttcaagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttatt 43132428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 44952033 - 44952107
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  44952033 gtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttatt 44952107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 46359677 - 46359751
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46359677 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttatt 46359751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 8476654 - 8476580
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||    
T  8476654 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatggaaattttatt 8476580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 29512325 - 29512399
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  29512325 gtgtgtttgtttcaaatttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttatt 29512399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 48340103 - 48340029
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||    
T  48340103 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttatt 48340029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 31611330 - 31611257
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||||| |||||||||| || ||||||| |||||||||||||||||||||||||||||||    
T  31611330 tgtgtttgtttcaagtttaccaaatttattcttatgaataacattccttggaatataaagatgggaattttatt 31611257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 24783928 - 24784008
Alignment:
Q  209 ctaaccgtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||| ||||||||||||||||||||| |||||||||| || ||||||| |||||||||||||||||||| ||||||||||    
T  24783928 ctaacagtgtgtttgtttcaagtttaccaaatttattcataagaataacattccttggaatataaagatgagaattttatt 24784008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 6231847 - 6231773
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  6231847 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagataggaattttatt 6231773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 9320795 - 9320721
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  |||||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  9320795 gtgtgtttgtttcaagtttatgaaatttattcataggaataacattccttggaatataaagatgagaattttatt 9320721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 20297518 - 20297592
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||| |||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  20297518 gtgtgtttgttttaagtttaccaaatttattcttaggaataacattctttggaatataaagatgggaattttatt 20297592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 24574292 - 24574366
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||||||||| ||||||||||    
T  24574292 gtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgagaattttatt 24574366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 43719271 - 43719197
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| || ||||||||||    
T  43719271 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagttgagaattttatt 43719197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 6832268 - 6832194
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||| || ||||||||||||||||| ||||||||||    
T  6832268 gtgtgtttgtttcaaatttaccaaatttattcctaagaataacattacttggaatataaagatgagaattttatt 6832194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 28770555 - 28770481
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||    
T  28770555 gtgtgtttgtttcaaatttaccaaatttattcctaggaataacattccttggaacataatgatgagaattttatt 28770481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 6927817 - 6927890
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||| |||||||  ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  6927817 tgtgtttgttttaagtttatcaaatttattactaggaataacattccttggaatataaagatgagaattttatt 6927890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 49216027 - 49216099
Alignment:
Q  217 gtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||| |||||| | ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  49216027 gtgtttgttttaagttttccaaaattattcttaggaataatgttccttggaatataaagatgggaattttatt 49216099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 10823063 - 10822989
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||  ||||||||| ||||||||||| ||||||  |||||||||||| ||||||||||    
T  10823063 gtgtgtttgtttcaagtttagcaaatttatttctaggaataacattccttacaatataaagatgagaattttatt 10822989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 31436268 - 31436194
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||||| | |||||| ||| || |||||||||||| |||||||||||    
T  31436268 gtgtgtttgtttcaagtttaccaaatttattcctggaaataacattctttagaatataaagataggaattttatt 31436194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 45826064 - 45826136
Alignment:
Q  217 gtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||||  |||||| |||||||    
T  45826064 gtgtttgtttccagtttactagatttattcctaggaataactttcctgggaatataagaatgggagttttatt 45826136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 28124779 - 28124708
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||| |||||||||  ||||| |||| |||||||||||||||| ||| ||||||||||    
T  28124779 tgtttgtttcaagtttaccaaatttatttttaggattaacattccttggaatataaatatgagaattttatt 28124708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 40584335 - 40584410
Alignment:
Q  214 cgtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||| ||  ||||||||||||| ||||||| ||||||  ||||||||||| |||||||||||    
T  40584335 cgtgtgtttgtttcaagtgtaacaaatttattcctaagaataacattccttcaaatataaagataggaattttatt 40584410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 26849491 - 26849417
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||| |||||||| |||||||||  |||||||||  || |||||||||||||||||| |||||||||    
T  26849491 gtgtgtttgttttaagtttaccaaatttatttttaggaataatatttcttggaatataaagatggaaattttatt 26849417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 38140710 - 38140640
Alignment:
Q  219 gtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||| ||||  ||||||||| ||||||||||| ||||||||||||||||| || ||||||||||    
T  38140710 gtttgtttcaattttataaaatttatttctaggaataacattccttggaatataaaggtgtgaattttatt 38140640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 53166070 - 53165996
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||   |||||||| ||| ||||||| ||||||| |||||||||||||| ||||||||    
T  53166070 gtgtgtttgtttcaagtttatccaatttatttctaagaataacattccttgaaatataaagatgggtattttatt 53165996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 46075173 - 46075077
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||||||  | |||||||||||| | || |||| |||||||||||||    
T  46075173 ttgagatgcaaaagatggtagtctatgaaccttaccatgacaacaagcagtacaaaaatctgacaagcttttatttggtaattgtatattacaaagt 46075077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 55435726 - 55435654
Alignment:
Q  217 gtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||| |  ||||||| ||||  ||||||||||||||||| |||||||    
T  55435726 gtgtttgtttcaagtttactagatttattcttgtgaataactttcccgggaatataaagatgggagttttatt 55435654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 27822996 - 27823070
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||||||||| |||||||||  |||||||||| ||| || ||| ||||| ||| ||||||||||    
T  27822996 gtgtgtttgtttcaagtttaccaaatttatttttaggaataacattctttcgaacataaatatgagaattttatt 27823070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 28693777 - 28693703
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||||||| |||||||||||||||||||| |||||  ||||||| ||  | |||||| ||||||||||    
T  28693777 gtgtgtttgtttcaaatttactaaatttattcctagaaataattttccttgaaactttaagatgagaattttatt 28693703  T

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Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 32070999 - 32071069
Alignment:
Q  219 gtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||| || ||||  ||||||||||||| ||||||| || ||||||||||||||||| ||||||||||    
T  32070999 gtttgttttaaatttatcaaatttattcctatgaataacatttcttggaatataaagatgagaattttatt 32071069  T

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Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 33825911 - 33826007
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||| | |||| ||||||  |||||  |||||||||| |||||||  | |||||||||||| | || |||| |||||||||||||    
T  33825911 ttgagatgcaaaagatagcagtctatgaaccttaccatgacaacaagcagtacaaaaatctgacaagcttttatttggtaattgtatattacaaagt 33826007  T

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Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 38326157 - 38326253
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    ||||||||||||||| || |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  38326157 ttgagatgcaaaagaaggcagtctatgaaccttaccatgacaacaagcagtacagaaatctgacaagcttttatttggtaattttatattacaaagt 38326253  T

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Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 12228600 - 12228526
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||||||| ||||||||  |||||||||| | |||||||| ||  ||| |||||||||||| ||||||||||    
T  12228600 gtgtgtttgttacaagtttatcaaatttattcttgggaataacattatttgaaatataaagatgagaattttatt 12228526  T

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Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 33650357 - 33650286
Alignment:
Q  218 tgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||| |||||||||  || ||||||| ||  ||| ||| |||||||| ||||||||||    
T  33650357 tgtttgtttcaagtttaccaaatttatttttatgaataacattatttgaaatctaaagatgagaattttatt 33650286  T

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Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 26085442 - 26085516
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    ||||||| |||||||||||||||||||||||  ||| |||||  ||| || ||| ||||||||  ||||||||||    
T  26085442 gtgtgttcgtttcaagtttactaaatttatttttagaaataagattctttcgaacataaagatatgaattttatt 26085516  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 2566524 - 2566471
Alignment:
Q  216 tgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaat 269  Q
    |||||||||||||||||||| ||||||||| || | |||||  |||||||||||    
T  2566524 tgtgtttgtttcaagtttaccaaatttatttcttgaaataatattccttggaat 2566471  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 247
Target Start/End: Original strand, 19532914 - 19532946
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcc 247  Q
    ||||||||||||||||||||| |||||||||||    
T  19532914 gtgtgtttgtttcaagtttaccaaatttattcc 19532946  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 38326292 - 38326332
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  38326292 aagtctgctatgccagataccatacatggaaggaaaagact 38326332  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 46075038 - 46074998
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  46075038 aagtctgctatgccagataccatacatggaaggaaaagact 46074998  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 55490331 - 55490291
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  55490331 aagtctgctatgccagataccatacatggaaggaaaagact 55490291  T

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Target: scaffold0702 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 3911 - 3837
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||  || ||||||||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  3911 gtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttatt 3837  T

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Target: scaffold0662 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 4191 - 4265
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||||||||||||  || ||||||||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  4191 gtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttatt 4265  T

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Target: scaffold1284 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold1284
Description:

Target: scaffold1284; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 1811 - 1715
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  1811 ttgagatgcaaaagatggcagtctatgaaccttaccatgacaacaagcagtacataaatctgacaagcttttatttggtaattttatattacaaagt 1715  T

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Target: scaffold1284; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 1677 - 1637
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  1677 aagtctgctatgccagataccatacatggaaggaaaagact 1637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 5)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 161190 - 161094
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  161190 ttgagatgcaaaagatggcagtctatgaaccttaccatgacaacaagcagtacagaaatctgacaagcttttatttggtaattttatattacaaagt 161094  T

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Target: scaffold0014; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 175336 - 175240
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||  |||||  |||||||||| |||| ||  | |||||||||||| | || ||||||||||||||||||    
T  175336 ttgagatgcaaaagatggcagtctatgaaccttaccatgacaacaagcagtacagaaatctgacaagcttttatttggtaattttatattacaaagt 175240  T

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Target: scaffold0014; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 170486 - 170392
Alignment:
Q  48 ttgagatgcaaaagatggaagtcgatgaactgtaccagaacaacaagcaatacaaaagccggacaagcttttaataggcaattttatattacaaagt 144  Q
    |||||||||||||||||| |||| ||||||   ||||  |||||||||| ||||| |  | |||||||||||| | || |||| |||||||||||||    
T  170486 ttgagatgcaaaagatggcagtctatgaacc--accatgacaacaagcagtacaacaatctgacaagcttttatttggtaattgtatattacaaagt 170392  T

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Target: scaffold0014; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 161055 - 161015
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  161055 aagtctgctatgccagataccatacatggaaggaaaagact 161015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 175201 - 175161
Alignment:
Q  141 aagtctgctatgccagatgctatatatggaaggaaaagact 181  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  175201 aagtctgctatgccagataccatacatggaaggaaaagact 175161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 29298 - 29224
Alignment:
Q  215 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttatt 289  Q
    |||||||| ||| |||||||  ||||||||||||| ||||||| ||  ||||||||||||||| |||||||||||    
T  29298 gtgtgtttattttaagtttatcaaatttattcctatgaataacattttttggaatataaagataggaattttatt 29224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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