View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18331_high_36 (Length: 242)
Name: NF18331_high_36
Description: NF18331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18331_high_36 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 37179403 - 37179577
Alignment:
| Q |
68 |
ctaagtctcaaagaacccgacggttgttttacaacaagcaagatctccgtcgtcggtggtggcggcggcaatttcaaactgaagcggttaatttttgatc |
167 |
Q |
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| T |
37179403 |
ctaagtctcaaagaacccgacggttgttttacaacaagcaagacctccgctgccggtggtggtggcggtgatttagaactgaagcggttaatttttgatc |
37179502 |
T |
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| Q |
168 |
cttcacgtttgctttcaagaaagcacacggtgttttgagatgttctgttctggcaacgtttctggatttacaatt |
242 |
Q |
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| T |
37179503 |
cttcacgtttgctttcaaggaagcacatggtgttttgaaatgttctgttctggcaacgtttctggatttacaatt |
37179577 |
T |
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