View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18332_low_12 (Length: 279)
Name: NF18332_low_12
Description: NF18332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18332_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 23190727 - 23190990
Alignment:
| Q |
1 |
tttctttggcttaattatatttttgtttcttgattttagtcctataaaaaacgagttttgatatagaggatagaaaaagcgttattttcnnnnnnnnntc |
100 |
Q |
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| T |
23190727 |
tttctttggcttaattatatttttgtttcttgattttagtcctataaaaaacgagttttgatatagaggatagaaaaagcgttattttcaaaaaaaaatc |
23190826 |
T |
|
| Q |
101 |
aagcatggattttgattgctttgtgaagtttcaacggcgatgatcagaacctgcacgatgacggtgccagaaggcacaacatgcagggtataaagctaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23190827 |
aagcatggattttgattgctttgtgaagtttcaacggcgatgatcagaacctgcacgatgacggtgccagaaggcacaacatgcagggtataaagctaat |
23190926 |
T |
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| Q |
201 |
gtcggatttacatgaacgggtgtataaaactacactaatgcaagaagaaaaagaagtatggtgt |
264 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
23190927 |
gtcggatttacatgaacgggtgtaaaaaactacactaatgcaagaagaaaaagaagtatggtgt |
23190990 |
T |
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