View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18334_high_6 (Length: 306)
Name: NF18334_high_6
Description: NF18334
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18334_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 18 - 305
Target Start/End: Original strand, 1793130 - 1793417
Alignment:
| Q |
18 |
gcagcaacattagaagaggttgtgacccataagttgatttaaatttgcatacgttgatttaaatttgtattcaaacaacttgcatggaagctccaacaac |
117 |
Q |
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| T |
1793130 |
gcagcaacattagaagaggttgtgacccataagttgatttaaatttgcatacgttgatttaaatttgtattcaaacaacttgcatggaagctccaacaac |
1793229 |
T |
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| Q |
118 |
ttgcttaannnnnnngctcatctacatcaagtaaaatacttggatattgacgactattttctaaaggtataatgcttgaattgacaaccctaatattgtt |
217 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1793230 |
ttgcttaatttttttgctcatctacatcaagtaaaatacttggatattgacgactattttctaaaggtataatgcttgaattgacaaccctaatattgtt |
1793329 |
T |
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| Q |
218 |
tagtttcccacacctctaattccctaccaatttgaaatgaactacaataatgagtatgcaactcttgatctgcaagtattataaacat |
305 |
Q |
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| T |
1793330 |
tagtttcccacacctccaattccctaccaatttgaaatgaactacaataatgagtatgcaactcttgatctgcaagtattataaacat |
1793417 |
T |
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