View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18335_low_18 (Length: 297)
Name: NF18335_low_18
Description: NF18335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18335_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 10842483 - 10842197
Alignment:
| Q |
1 |
tattagggtcaaattttctctgtggtggatgagatggtctacacacccatttcttcttcttttaagggaggataatttctctatcaatttcatcatcatg |
100 |
Q |
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| T |
10842483 |
tattagggtcaaattttctctgtggtggatgagatggtctacacacccatttcttcttcttttaagggaggataatttctctatcaatttcatcatcatg |
10842384 |
T |
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| Q |
101 |
catccattagtcacaccattggtcgcacatattgggatctacatcccaaacaaaatggccatatactttgtcagtatagataggcttgcc--agtgacaa |
198 |
Q |
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| T |
10842383 |
catccattagtcacaccatcggtcgcacatattgggatctacatcccaaacaaaatggccatatactttgtcagtatagataggcttgccttagtgacaa |
10842284 |
T |
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| Q |
199 |
cataaataggacaccaaccttcttcaattattggttgtatgatcatggtttgaaaaatatgataagccaaacttggtccattatctg |
285 |
Q |
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| T |
10842283 |
cataaataggacaccaatcttcttcaattattggttgtatgatcatggtttgaaaaatatgataagccaaacttggcccattatctg |
10842197 |
T |
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