View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18336_low_34 (Length: 272)
Name: NF18336_low_34
Description: NF18336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18336_low_34 |
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Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 8690627 - 8690367
Alignment:
| Q |
1 |
agactttctaataccacctatgttgctaatcagcaaataccacggtccatatttatagttgattgatcacttttcaagtatatataatatgatataatgt |
100 |
Q |
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| T |
8690627 |
agactttctaataccacctatgttgctaatcagcaaataccacggtccatatttatagttgattgatcacttttcaagtatatataatatgatataatgt |
8690528 |
T |
|
| Q |
101 |
aacataatacaactaatcgattcatttttaaatttatatcttctgcacgtaattgccaagacctgtgaagtatggacatctctagaacactcatatgaca |
200 |
Q |
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| T |
8690527 |
aacataatacaactaatcgattcatttttaaatttatatcttctgcacgtaattgccaagacctgtgaagtatggacatctctagaacactcatatgaca |
8690428 |
T |
|
| Q |
201 |
ctcgtaagacatgtgttgaacaattcagaaatgtatctcaaataaaattgttttttccttt |
261 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8690427 |
ctcgtaagacatgtgttgaacaattcagaaatgtatctcaaataaaattgttttttccttt |
8690367 |
T |
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