View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18338_high_9 (Length: 260)
Name: NF18338_high_9
Description: NF18338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18338_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 5173457 - 5173217
Alignment:
| Q |
1 |
ctcactacagaaagttaggctttggcttggaacattcgactcagccgaagaggcagctcgtgcttatgacactgctgctagagctttgagaggtgctaat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5173457 |
ctcactacagaaagttaggctttggcttggaacattcgactcagccgaagaggcagctcgtgcttatgacactgctgctagagctttgagaggtgctaat |
5173358 |
T |
|
| Q |
101 |
gcaagaaccaactttgaattgccagaatctgaaacaaatggtagtggaggttcaaagcgcggtgctggttccaaattcatgctagagaatacagaacctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5173357 |
gcaagaaccaactttgaattgccagaatctgaaacaaatggtagtggaggttcaaagcgcggtgctggttccaaattcatgctagagaatacagaacctt |
5173258 |
T |
|
| Q |
201 |
tttcttttgaagatgtcagtgactcgggttcaggttcagaa |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
5173257 |
tttcttttgaagatgtcagtgactcgggttcaggttcagaa |
5173217 |
T |
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