View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18339_low_46 (Length: 308)

Name: NF18339_low_46
Description: NF18339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18339_low_46
NF18339_low_46
[»] chr8 (49 HSPs)
chr8 (16-301)||(32898424-32898709)
chr8 (154-301)||(35177392-35177539)
chr8 (155-276)||(35178808-35178929)
chr8 (159-301)||(1952949-1953090)
chr8 (156-301)||(10407563-10407708)
chr8 (155-250)||(41753996-41754091)
chr8 (194-276)||(5965446-5965528)
chr8 (73-154)||(28575354-28575436)
chr8 (74-149)||(28540626-28540702)
chr8 (73-154)||(28567761-28567843)
chr8 (73-154)||(28562263-28562345)
chr8 (155-265)||(41754810-41754919)
chr8 (70-152)||(8673689-8673772)
chr8 (202-301)||(45476207-45476306)
chr8 (73-149)||(28557200-28557277)
chr8 (79-154)||(11777755-11777831)
chr8 (63-141)||(1155241-1155320)
chr8 (63-149)||(10954165-10954252)
chr8 (63-149)||(10962170-10962257)
chr8 (54-154)||(23982181-23982280)
chr8 (155-264)||(30134564-30134673)
chr8 (63-154)||(5535881-5535973)
chr8 (73-154)||(9134105-9134187)
chr8 (96-156)||(16531655-16531716)
chr8 (204-273)||(28619552-28619621)
chr8 (207-247)||(1951992-1952032)
chr8 (108-156)||(3194977-3195025)
chr8 (167-267)||(31074004-31074104)
chr8 (96-154)||(6519130-6519189)
chr8 (96-154)||(18806656-18806714)
chr8 (196-267)||(28619028-28619099)
chr8 (96-154)||(31226557-31226616)
chr8 (194-276)||(5736879-5736961)
chr8 (198-301)||(5738002-5738105)
chr8 (100-154)||(5978604-5978658)
chr8 (94-154)||(13629125-13629186)
chr8 (94-154)||(13729537-13729598)
chr8 (220-301)||(10406269-10406350)
chr8 (96-154)||(2603160-2603219)
chr8 (96-154)||(5139763-5139822)
chr8 (96-154)||(9604590-9604649)
chr8 (202-269)||(12637769-12637836)
chr8 (115-154)||(36316758-36316797)
chr8 (208-251)||(41121160-41121203)
chr8 (79-148)||(9133763-9133833)
chr8 (115-154)||(3628225-3628265)
chr8 (196-276)||(8569447-8569527)
chr8 (73-152)||(12733998-12734077)
chr8 (63-154)||(23036740-23036830)
[»] chr3 (42 HSPs)
chr3 (155-299)||(2591625-2591769)
chr3 (155-276)||(36278950-36279071)
chr3 (153-276)||(17701923-17702046)
chr3 (153-276)||(55388069-55388192)
chr3 (153-273)||(2592014-2592134)
chr3 (155-276)||(17700516-17700637)
chr3 (156-276)||(48572984-48573104)
chr3 (153-300)||(52318297-52318444)
chr3 (153-276)||(47118055-47118178)
chr3 (194-276)||(11773055-11773137)
chr3 (155-301)||(52316977-52317123)
chr3 (196-276)||(36280321-36280401)
chr3 (155-273)||(34263803-34263921)
chr3 (151-268)||(33428447-33428564)
chr3 (155-268)||(45600951-45601063)
chr3 (201-276)||(48574463-48574538)
chr3 (155-276)||(49261541-49261659)
chr3 (171-269)||(48808380-48808478)
chr3 (167-301)||(20464079-20464213)
chr3 (160-301)||(50753820-50753961)
chr3 (154-276)||(19114530-19114652)
chr3 (194-276)||(53959104-53959186)
chr3 (155-276)||(19115151-19115271)
chr3 (155-252)||(53957673-53957769)
chr3 (157-269)||(55389480-55389592)
chr3 (154-276)||(47075355-47075477)
chr3 (196-276)||(3671077-3671157)
chr3 (167-232)||(19331118-19331183)
chr3 (73-154)||(52995740-52995822)
chr3 (73-154)||(46048837-46048919)
chr3 (196-266)||(33427791-33427860)
chr3 (110-154)||(55272799-55272844)
chr3 (74-154)||(3993527-3993607)
chr3 (63-154)||(26085011-26085103)
chr3 (92-151)||(33291077-33291137)
chr3 (194-250)||(47427897-47427953)
chr3 (115-154)||(41211980-41212019)
chr3 (237-275)||(48809659-48809697)
chr3 (74-154)||(3973484-3973564)
chr3 (74-154)||(3996313-3996393)
chr3 (74-154)||(4009839-4009919)
chr3 (54-152)||(35539498-35539597)
[»] chr4 (45 HSPs)
chr4 (155-301)||(42278047-42278193)
chr4 (154-268)||(47874561-47874675)
chr4 (154-276)||(53771053-53771175)
chr4 (156-276)||(47878488-47878608)
chr4 (155-276)||(31844720-31844841)
chr4 (160-268)||(26172954-26173062)
chr4 (154-267)||(4703230-4703343)
chr4 (81-157)||(5036044-5036121)
chr4 (203-301)||(50694795-50694893)
chr4 (153-276)||(39868918-39869039)
chr4 (194-264)||(54574462-54574532)
chr4 (155-276)||(48740024-48740145)
chr4 (167-276)||(53770343-53770452)
chr4 (91-154)||(2574137-2574201)
chr4 (194-299)||(4701802-4701907)
chr4 (54-154)||(8824901-8824999)
chr4 (79-153)||(35382452-35382527)
chr4 (73-154)||(10180701-10180783)
chr4 (203-272)||(21621869-21621938)
chr4 (63-154)||(11346924-11347016)
chr4 (154-250)||(19051261-19051357)
chr4 (217-276)||(19050298-19050357)
chr4 (204-263)||(54574822-54574881)
chr4 (74-154)||(31262505-31262586)
chr4 (169-273)||(26685429-26685528)
chr4 (202-276)||(25810417-25810491)
chr4 (154-268)||(31844967-31845081)
chr4 (153-263)||(36453823-36453933)
chr4 (73-154)||(49210982-49211063)
chr4 (155-268)||(26170638-26170751)
chr4 (155-244)||(44158502-44158591)
chr4 (115-154)||(30865887-30865927)
chr4 (167-267)||(39870687-39870787)
chr4 (63-154)||(43968726-43968817)
chr4 (205-276)||(21623121-21623192)
chr4 (96-154)||(35332071-35332130)
chr4 (202-268)||(6039166-6039232)
chr4 (91-154)||(40918069-40918134)
chr4 (54-147)||(52199739-52199832)
chr4 (193-266)||(2786257-2786330)
chr4 (194-235)||(42391933-42391974)
chr4 (96-154)||(822467-822527)
chr4 (208-276)||(32244692-32244760)
chr4 (91-154)||(35144361-35144424)
chr4 (115-154)||(39055158-39055198)
[»] chr1 (45 HSPs)
chr1 (155-301)||(32665749-32665895)
chr1 (154-301)||(9339643-9339790)
chr1 (154-276)||(7945558-7945680)
chr1 (149-301)||(10333165-10333317)
chr1 (155-301)||(52439477-52439619)
chr1 (155-299)||(10332984-10333128)
chr1 (196-276)||(9341029-9341109)
chr1 (155-276)||(5782412-5782533)
chr1 (158-276)||(6612420-6612538)
chr1 (171-276)||(7944169-7944274)
chr1 (194-267)||(52440572-52440645)
chr1 (154-276)||(22856677-22856799)
chr1 (208-268)||(6613991-6614051)
chr1 (155-265)||(3117647-3117757)
chr1 (194-267)||(5783122-5783195)
chr1 (167-268)||(50107215-50107316)
chr1 (217-273)||(34088476-34088532)
chr1 (96-154)||(42831622-42831681)
chr1 (204-266)||(25037925-25037987)
chr1 (204-266)||(25043137-25043199)
chr1 (77-154)||(44665404-44665482)
chr1 (81-153)||(27544334-27544407)
chr1 (154-259)||(44019983-44020088)
chr1 (54-154)||(47783741-47783841)
chr1 (96-154)||(43822753-43822812)
chr1 (165-267)||(1001162-1001264)
chr1 (73-154)||(9505571-9505653)
chr1 (73-154)||(641844-641925)
chr1 (96-154)||(24555871-24555931)
chr1 (102-154)||(52353876-52353929)
chr1 (167-267)||(8975169-8975269)
chr1 (74-154)||(11566967-11567043)
chr1 (74-145)||(40287082-40287154)
chr1 (177-276)||(1407660-1407759)
chr1 (112-154)||(11570005-11570048)
chr1 (76-154)||(28278063-28278142)
chr1 (96-154)||(36297960-36298019)
chr1 (91-154)||(38601050-38601113)
chr1 (198-264)||(534574-534639)
chr1 (194-276)||(11060788-11060870)
chr1 (73-154)||(11120507-11120588)
chr1 (89-154)||(11241567-11241633)
chr1 (109-154)||(13984028-13984074)
chr1 (209-276)||(32664564-32664623)
chr1 (63-154)||(36166836-36166928)
[»] chr2 (50 HSPs)
chr2 (150-276)||(32764931-32765057)
chr2 (155-301)||(17330209-17330355)
chr2 (155-276)||(31091531-31091652)
chr2 (152-276)||(32766243-32766367)
chr2 (158-276)||(31090165-31090283)
chr2 (156-301)||(7073638-7073783)
chr2 (167-301)||(2910110-2910244)
chr2 (154-276)||(24458057-24458179)
chr2 (156-273)||(24459453-24459570)
chr2 (199-276)||(14704048-14704125)
chr2 (153-299)||(40000315-40000461)
chr2 (154-276)||(39016387-39016507)
chr2 (160-266)||(34037687-34037793)
chr2 (194-301)||(17466807-17466914)
chr2 (153-266)||(2911505-2911618)
chr2 (54-154)||(11921880-11921980)
chr2 (153-276)||(5914996-5915119)
chr2 (170-276)||(34582674-34582780)
chr2 (155-266)||(21733785-21733899)
chr2 (154-250)||(39015002-39015098)
chr2 (200-275)||(17466084-17466159)
chr2 (73-154)||(40999632-40999714)
chr2 (202-270)||(31814354-31814422)
chr2 (63-154)||(32887690-32887781)
chr2 (74-154)||(26312428-26312507)
chr2 (194-276)||(33161804-33161886)
chr2 (73-154)||(41068878-41068958)
chr2 (194-270)||(7412129-7412205)
chr2 (73-141)||(36266934-36267002)
chr2 (115-154)||(6562938-6562977)
chr2 (79-154)||(9733611-9733686)
chr2 (96-154)||(26297092-26297151)
chr2 (209-276)||(38984993-38985060)
chr2 (81-154)||(34234847-34234920)
chr2 (202-276)||(38853800-38853874)
chr2 (200-276)||(5914347-5914423)
chr2 (63-131)||(30465205-30465273)
chr2 (70-154)||(37648559-37648643)
chr2 (115-154)||(34375046-34375085)
chr2 (96-154)||(36887657-36887716)
chr2 (87-154)||(37347928-37347995)
chr2 (96-154)||(45135739-45135798)
chr2 (73-131)||(5038666-5038723)
chr2 (202-276)||(11985736-11985810)
chr2 (202-268)||(12746213-12746279)
chr2 (210-266)||(21732163-21732216)
chr2 (115-147)||(4755401-4755433)
chr2 (208-276)||(26586299-26586367)
chr2 (244-276)||(37607189-37607221)
chr2 (194-242)||(43380617-43380665)
[»] chr5 (34 HSPs)
chr5 (155-301)||(4592859-4593005)
chr5 (155-276)||(8074449-8074570)
chr5 (152-276)||(546040-546163)
chr5 (155-276)||(2464667-2464788)
chr5 (155-276)||(28591118-28591239)
chr5 (155-299)||(40612640-40612784)
chr5 (155-272)||(9538057-9538174)
chr5 (155-276)||(2466778-2466899)
chr5 (152-264)||(21069284-21069396)
chr5 (154-276)||(25590428-25590549)
chr5 (151-276)||(16611722-16611847)
chr5 (156-268)||(19182949-19183061)
chr5 (194-276)||(32641730-32641812)
chr5 (154-276)||(14891151-14891269)
chr5 (195-268)||(19186232-19186305)
chr5 (176-266)||(544668-544757)
chr5 (155-301)||(8075812-8075958)
chr5 (167-251)||(18400200-18400284)
chr5 (158-276)||(9537024-9537141)
chr5 (74-154)||(15468210-15468291)
chr5 (153-227)||(13651173-13651246)
chr5 (194-276)||(32640325-32640407)
chr5 (159-267)||(31947050-31947158)
chr5 (205-301)||(4594080-4594174)
chr5 (74-154)||(12593080-12593162)
chr5 (161-301)||(16978996-16979136)
chr5 (72-154)||(41520950-41521032)
chr5 (215-272)||(18004696-18004753)
chr5 (200-263)||(13483063-13483126)
chr5 (197-301)||(28589739-28589843)
chr5 (220-266)||(14881010-14881056)
chr5 (218-262)||(13483174-13483218)
chr5 (114-154)||(7293041-7293082)
chr5 (115-154)||(13486580-13486620)
[»] chr7 (58 HSPs)
chr7 (153-301)||(7258271-7258419)
chr7 (159-301)||(43457459-43457601)
chr7 (155-299)||(48647424-48647568)
chr7 (154-276)||(48777253-48777375)
chr7 (155-301)||(35729065-35729211)
chr7 (153-273)||(44334456-44334576)
chr7 (153-301)||(10899052-10899200)
chr7 (156-301)||(44333138-44333281)
chr7 (158-276)||(30925012-30925130)
chr7 (154-301)||(35727696-35727842)
chr7 (159-301)||(7259663-7259805)
chr7 (159-276)||(48646051-48646168)
chr7 (155-265)||(45583682-45583792)
chr7 (155-276)||(48788676-48788797)
chr7 (158-264)||(46286504-46286610)
chr7 (154-276)||(42477378-42477499)
chr7 (169-276)||(8374926-8375033)
chr7 (194-268)||(8375595-8375669)
chr7 (194-301)||(12223678-12223785)
chr7 (210-301)||(45584475-45584566)
chr7 (151-264)||(8048800-8048913)
chr7 (144-276)||(44529021-44529147)
chr7 (204-267)||(44530624-44530687)
chr7 (208-268)||(13578332-13578392)
chr7 (202-276)||(33607627-33607701)
chr7 (73-152)||(4958192-4958272)
chr7 (80-154)||(36656696-36656771)
chr7 (154-268)||(39708100-39708214)
chr7 (194-267)||(12220060-12220133)
chr7 (74-154)||(38223930-38224011)
chr7 (70-154)||(46748115-46748200)
chr7 (75-154)||(5513935-5514014)
chr7 (63-154)||(19987103-19987195)
chr7 (87-154)||(32724199-32724267)
chr7 (198-253)||(10894391-10894446)
chr7 (73-151)||(23802224-23802302)
chr7 (159-242)||(34704911-34704994)
chr7 (96-154)||(43302206-43302265)
chr7 (73-154)||(19594003-19594085)
chr7 (73-154)||(19753049-19753131)
chr7 (73-154)||(48767245-48767327)
chr7 (54-139)||(30859511-30859595)
chr7 (196-301)||(5930112-5930216)
chr7 (106-154)||(48615376-48615424)
chr7 (87-153)||(2888112-2888179)
chr7 (194-276)||(34888927-34889009)
chr7 (218-276)||(43461732-43461789)
chr7 (207-276)||(8879547-8879616)
chr7 (100-152)||(37698469-37698522)
chr7 (79-154)||(2008549-2008625)
chr7 (156-301)||(19433913-19434058)
chr7 (213-276)||(25621725-25621788)
chr7 (194-276)||(7509475-7509557)
chr7 (73-154)||(36482094-36482176)
chr7 (154-227)||(21062814-21062887)
chr7 (82-154)||(23156328-23156401)
chr7 (202-267)||(32793216-32793281)
chr7 (115-154)||(36039051-36039091)
[»] scaffold0034 (1 HSPs)
scaffold0034 (156-272)||(116054-116170)
[»] chr6 (12 HSPs)
chr6 (153-276)||(30747995-30748118)
chr6 (154-272)||(31218952-31219070)
chr6 (167-276)||(31219164-31219273)
chr6 (63-154)||(7694011-7694103)
chr6 (194-276)||(23507985-23508067)
chr6 (92-154)||(9491843-9491906)
chr6 (96-154)||(32658513-32658572)
chr6 (194-250)||(6468811-6468867)
chr6 (73-154)||(22281855-22281937)
chr6 (98-154)||(5002458-5002515)
chr6 (90-154)||(6988147-6988212)
chr6 (231-301)||(31239966-31240036)
[»] scaffold0039 (3 HSPs)
scaffold0039 (157-276)||(79073-79192)
scaffold0039 (154-276)||(79687-79809)
scaffold0039 (160-262)||(74331-74433)
[»] scaffold0767 (1 HSPs)
scaffold0767 (208-276)||(5650-5718)
[»] scaffold0040 (1 HSPs)
scaffold0040 (73-131)||(55886-55944)
[»] scaffold0991 (1 HSPs)
scaffold0991 (73-154)||(2971-3052)
[»] scaffold0036 (1 HSPs)
scaffold0036 (110-154)||(2160-2204)
[»] scaffold0017 (1 HSPs)
scaffold0017 (106-154)||(31890-31938)


Alignment Details
Target: chr8 (Bit Score: 180; Significance: 3e-97; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 32898709 - 32898424
Alignment:
Q  16 ggtatctattaagtaccatttgaggagaaacnnnnnnngggtcttattaagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacact 115  Q
    |||| ||||||||||  ||||||||||||||       |||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||    
T  32898709 ggtacctattaagtattatttgaggagaaactttttttgggtcttattaagacccgaggtctcacttaagaacctcaattttaagcgggatccacacact 32898610  T
Q  116 tttaatattaaaaaatgaaatgtaatgatataaagttatgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactca 215  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||   |||||||||||||||||||| |    
T  32898609 tttaatattaaaaaaagaaatgtaatgatataaagttatgagcaaatagtcactttagtccctgactctgcaactcactgtcacataggtccctgactta 32898510  T
Q  216 ggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||       ||||||||||||||||||    
T  32898509 ggattaaatacaaataagtccctgactctgcacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgt 32898424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 35177392 - 35177539
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||||||||| | |||||||||| ||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  35177392 tgagcaaatagtcaatttagtccctaattctgcagctcgctgtcacataggtccctgactccggattaaatacaaataagtccctgactctgcacttccg 35177491  T
Q  254 ctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
     ||||||||||||||||||||||       ||||||||||||||||||    
T  35177492 ttatcactttagtccctgacgttaaaataatctgttaagtgatgatgt 35177539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 155 - 276
Target Start/End: Complemental strand, 35178929 - 35178808
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| ||||| |||||||| ||||||  | | ||||| || ||||||||||||||||||||||||||||||||| |||| ||||||||||||     
T  35178929 gagcaaatagtcactttggtccctgactctgcacatcgctgtcatattggtccctgactcaggattaaatacaaataagtccctgattctgcacttccgt 35178830  T
Q  255 tatcactttagtccctgacgtt 276  Q
    ||||||||||||||||||||||    
T  35178829 tatcactttagtccctgacgtt 35178808  T

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Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 301
Target Start/End: Complemental strand, 1953090 - 1952949
Alignment:
Q  159 aaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatc 258  Q
    ||||||| |||||||||||||||||||||||| | ||||| |||| || |||||| ||||||| |||||||||||||| |||||||| ||||||| ||||    
T  1953090 aaatagtcactttagtccctgattctgcagctcgttgtcatatagatctctgact-aggattacatacaaataagtctatgactctgtacttccgttatc 1952992  T
Q  259 actttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||||||| ||||||||       ||||||||||||||||||    
T  1952991 actttagtctctgacgttaaataaatctgttaagtgatgatgt 1952949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 156 - 301
Target Start/End: Complemental strand, 10407708 - 10407563
Alignment:
Q  156 agcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgct 255  Q
    |||||||||| ||||||||| ||||||||||||||   |||||||||||||  ||||| ||||||||| |||||||||||  | ||| |||||||||| |    
T  10407708 agcaaatagtcactttagtctctgattctgcagctcactgtcacataggtcattgacttaggattaaacacaaataagtccataactttgcacttccgtt 10407609  T
Q  256 atcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||||||||| |||||||||       ||||||||||||||||||    
T  10407608 atcactttagttcctgacgttaaaaaaatctgttaagtgatgatgt 10407563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 155 - 250
Target Start/End: Original strand, 41753996 - 41754091
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcactt 250  Q
    ||||||||||| ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||| ||| ||||| |||||||| |||||    
T  41753996 gagcaaatagtcactttagtccctggttctgcaccttgctgtcacataggtccctgactcaggattaaatataaacaagtccctgactctacactt 41754091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 194 - 276
Target Start/End: Complemental strand, 5965528 - 5965446
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||| | |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||    
T  5965528 tgtcacaaatgtccctgactcaggattaaatacaaagaagtctttgactctgcacttccgttatcactttagtctctgacgtt 5965446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 28575354 - 28575436
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||| |||||||||||||||||    
T  28575354 ggtctcacttaagaccctcaatcttaagcgggacccactctcttttaatattaaaaaattgaaatataatgatataaagttat 28575436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 74 - 149
Target Start/End: Original strand, 28540626 - 28540702
Alignment:
Q  74 gtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaa 149  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  28540626 gtctcacttaagaacctcaatcttatgcgggactcacactcttttaatattaaaaaattgaaatgtaatgatataaa 28540702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 28567761 - 28567843
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||||||||||||| ||||||||||||||||||||||| |  |||||||||||||||| |||||| |||||||||||||||||    
T  28567761 ggtctcacttaagaccctcaatcttaagcgggacccactctattttaatattaaaaaattgaaatataatgatataaagttat 28567843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 28562263 - 28562345
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||||||||||||| ||||||||||||||||||||||| |  |||||||||||||||| |||||| |||| ||||||||||||    
T  28562263 ggtctcacttaagaccctcaatcttaagcgggacccactctattttaatattaaaaaattgaaatataataatataaagttat 28562345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 41754919 - 41754810
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||| ||| |||||||||| || | |||||||||| || |||||||||||||||||||||| ||||  |||||||| ||||||||     
T  41754919 gagcaaatagtcactttaatcc-tgattctgcacctcgctgtcacatagatctctgactcaggattaaatacaaacaagttcctgactctacacttccgt 41754821  T
Q  255 tatcactttag 265  Q
    ||| |||||||    
T  41754820 tattactttag 41754810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 8673772 - 8673689
Alignment:
Q  70 cgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatg-aaatgtaatgatataaagtt 152  Q
    ||||||||||||||||| ||||||||||||  |||||||| ||  |||||||||||||||||| ||||||| ||||||||||||    
T  8673772 cgaggtctcacttaagaccctcaatcttaaatgggacccaaacttttttaatattaaaaaatgaaaatgtagtgatataaagtt 8673689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 45476207 - 45476306
Alignment:
Q  202 aggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    |||||| ||| |||| |||||||||||||||||||||||||||||||||| | ||||||||||||| ||  ||||       ||||||||||||||||||    
T  45476207 aggtccatgattcagaattaaatacaaataagtctctgactctgcacttctgttatcactttagtctctcccgttaaaaaaatctgttaagtgatgatgt 45476306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 28557200 - 28557277
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaa 149  Q
    |||||||||||||| ||||||||||| | |||| |||||| ||||||||||||||||| ||||||||||| |||||||    
T  28557200 ggtctcacttaagaccctcaatcttatgtgggatccacactcttttaatattaaaaaattgaaatgtaataatataaa 28557277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 11777831 - 11777755
Alignment:
Q  79 acttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaa-atgaaatgtaatgatataaagttat 154  Q
    |||||||| |||||||||||| |||||| | ||| ||||||||||||||||  ||||||||||||||||||||||||    
T  11777831 acttaagatcctcaatcttaaacgggactcgcactcttttaatattaaaaagttgaaatgtaatgatataaagttat 11777755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 1155320 - 1155241
Alignment:
Q  63 taagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaat 141  Q
    ||||| ||||||||| |||||||| |  |||||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  1155320 taagacccgaggtcttacttaagacctccaatcttaagcgggactcacactcttttaatattaaaaaattgaaatgtaat 1155241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 10954252 - 10954165
Alignment:
Q  63 taagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaa 149  Q
    ||||| ||||||||||||||||||  |||||| || |||||||| | ||  ||||||||||||||||| |||||||||||||||||||    
T  10954252 taagacccgaggtctcacttaagactctcaatttttagcgggactcgcaatcttttaatattaaaaaattgaaatgtaatgatataaa 10954165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 10962257 - 10962170
Alignment:
Q  63 taagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaa 149  Q
    ||||| ||||||||||||||||||  |||||| || |||||||| | ||  ||||||||||||||||| |||||||||||||||||||    
T  10962257 taagacccgaggtctcacttaagactctcaatttttagcgggactcgcaatcttttaatattaaaaaattgaaatgtaatgatataaa 10962170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 23982181 - 23982280
Alignment:
Q  54 gggtcttattaagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagtt 152  Q
    ||||||||| |||| ||| ||||| |||||||| ||||| | |||||||||||| ||||  ||||||||||||||||| ||||| |||||||||||||||    
T  23982181 gggtcttat-aagacccggggtcttacttaagaccctcacttttaagcgggacc-acacttttttaatattaaaaaattgaaatataatgatataaagtt 23982278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 30134564 - 30134673
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||| | |||||||||| | | |||||| || | ||||||| |||||||  ||||| ||||||||||||| |||| | |||||||||||||| |     
T  30134564 gagcaaataatcactttagtccttaactctgcacctcgctgtcacaaaggtcccctactcatgattaaatacaaagaagtgtgtgactctgcacttctgt 30134663  T
Q  255 tatcacttta 264  Q
    ||||||||||    
T  30134664 tatcacttta 30134673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 5535973 - 5535881
Alignment:
Q  63 taagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||| ||| | |||||||| || || | ||||||| ||||| ||| ||||||||||||||||| |||||| |||||||||||||||||    
T  5535973 taagatccggggttttacttaagacccccacttttaagcgagacccgcactcttttaatattaaaaaattgaaatataatgatataaagttat 5535881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 9134105 - 9134187
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||| |||||||| ||||  | |||||||||| || ||| ||||||||||||||||| |||||| |||||||||||||||||    
T  9134105 ggtcttacttaagatcctcccttttaagcgggatccgcactcttttaatattaaaaaattgaaatataatgatataaagttat 9134187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 16531716 - 16531655
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagttatga 156  Q
    |||||||||| || |||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  16531716 ttaagcgggatccgcacaattttaatattaaaaaattgaaatataatgatataaagttatga 16531655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 28619621 - 28619552
Alignment:
Q  204 gtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgac 273  Q
    |||||||||||||||||||||||||| | |||  ||||||||||||||   ||||||||||||| |||||    
T  28619621 gtccctgactcaggattaaatacaaagaggtcattgactctgcacttctattatcactttagtctctgac 28619552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 1951992 - 1952032
Alignment:
Q  207 cctgactcaggattaaatacaaataagtctctgactctgca 247  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  1951992 cctgactcaggattaaatacaaataagtttctgactctgca 1952032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 3195025 - 3194977
Alignment:
Q  108 cacacacttttaatattaaaaaatgaaatgtaatgatataaagttatga 156  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  3195025 cacatacttttaatattaaaaaataaaatgtaatgatatagagttatga 3194977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 267
Target Start/End: Original strand, 31074004 - 31074104
Alignment:
Q  167 actttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    |||||| ||||||| |||||| |||| ||||||| | ||| ||||||| ||||||||| ||||  ||| ||||| | |||||||| | ||||||||||||    
T  31074004 actttaatccctgactctgcatcttgctgtcacaaaagtctctgactctggattaaatgcaaagtagtttctgaatgtgcacttctgttatcactttagt 31074103  T
Q  267 c 267  Q
    |    
T  31074104 c 31074104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 6519189 - 6519130
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    |||||||||| || ||| |||||| ||||||||||| |||||||||||||||||||||||    
T  6519189 ttaagcgggatccgcactcttttagtattaaaaaattgaaatgtaatgatataaagttat 6519130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 18806714 - 18806656
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    ||||||||||||| ||| |||||||||||||||||| ||||| |||||||||||||||||    
T  18806714 ttaagcgggacccgcac-cttttaatattaaaaaattgaaatataatgatataaagttat 18806656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 28619028 - 28619099
Alignment:
Q  196 tcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtc 267  Q
    ||||| ||||||||||| || ||||||||||||| || ||  ||||||||||||| || |||||||||||||    
T  28619028 tcacaaaggtccctgacccatgattaaatacaaagaaatcattgactctgcactttcgttatcactttagtc 28619099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 31226616 - 31226557
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| |||||||||||| ||||    
T  31226616 ttaagcgggacccgcactcttttaatattaaaaaattgaaatataatgatataaaattat 31226557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 5736879 - 5736961
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    |||||||||  || |||| |||| |||||||||||| || ||||| ||||| ||||| || |||||||||||||||| |||||    
T  5736879 tgtcacataaatctctgattcagaattaaatacaaagaaatctctaactctacactttcgttatcactttagtccctcacgtt 5736961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 301
Target Start/End: Complemental strand, 5738105 - 5738002
Alignment:
Q  198 acataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgttnnnnnnntctgttaagtgatg 297  Q
    |||||||||| ||||||| ||||||||||||| ||||   |||||||| ||||||| |||||||| ||||  || ||||       ||||||||||||||    
T  5738105 acataggtccatgactcaagattaaatacaaagaagttattgactctgtacttccgttatcacttcagtctttggcgttaaataattctgttaagtgatg 5738006  T
Q  298 atgt 301  Q
    ||||    
T  5738005 atgt 5738002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 5978658 - 5978604
Alignment:
Q  100 gcgggacccacacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||||| ||| ||||||| |||||||| |||||| |||||||||||||||||    
T  5978658 gcgggacccgcactcttttaacattaaaaattgaaatataatgatataaagttat 5978604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 13629186 - 13629125
Alignment:
Q  94 tcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||| ||| |||||||| |||||||||||||||| ||| |||||||| |||||||||||    
T  13629186 tcttaagtgggtcccacacatttttaatattaaaaaattgatatgtaatggtataaagttat 13629125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 13729598 - 13729537
Alignment:
Q  94 tcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||| ||| |||||||| |||||||||||||||| ||| |||||||| |||||||||||    
T  13729598 tcttaagtgggtcccacacatttttaatattaaaaaattgatatgtaatggtataaagttat 13729537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 10406269 - 10406350
Alignment:
Q  220 taaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    |||||| ||| |||||||||||||||||||||   |||||||||||||||||  |||       ||||||||||||||||||    
T  10406269 taaataaaaacaagtctctgactctgcacttctattatcactttagtccctggtgttaaaaaaatctgttaagtgatgatgt 10406350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 2603219 - 2603160
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    |||||||||  || ||| |||||||||||||||||| |||||||| ||||||||||||||    
T  2603219 ttaagcggggtccgcacgcttttaatattaaaaaattgaaatgtagtgatataaagttat 2603160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 5139822 - 5139763
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaatg-aaatgtaatgatataaagttat 154  Q
    ||||||||||||  ||| ||||||||||||||||||| |||| |||||||||||| ||||    
T  5139822 ttaagcgggaccagcactcttttaatattaaaaaatgaaaatataatgatataaaattat 5139763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 9604649 - 9604590
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    |||||||||| || ||| |||||||| ||||||||| ||||| |||||||||||||||||    
T  9604649 ttaagcgggatcctcactcttttaatgttaaaaaattgaaatctaatgatataaagttat 9604590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 12637836 - 12637769
Alignment:
Q  202 aggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccc 269  Q
    |||||||| |||||||||| ||||||||  |||  |||| | |||||||||| |||||||||||||||    
T  12637836 aggtccctaactcaggattgaatacaaagtagttcctgaatgtgcacttccgttatcactttagtccc 12637769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 36316758 - 36316797
Alignment:
Q  115 ttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  36316758 ttttaatattaaaaattgaaatgtaatgatataaaattat 36316797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 251
Target Start/End: Original strand, 41121160 - 41121203
Alignment:
Q  208 ctgactcaggattaaatacaaataagtctctgactctgcacttc 251  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||    
T  41121160 ctgactcatgattaaatacaaagaagtctctgactatgcacttc 41121203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 9133763 - 9133833
Alignment:
Q  79 acttaagaacctcaatcttaagcgggacccacacacttttaatatta-aaaaatgaaatgtaatgatataa 148  Q
    |||||||| ||||| | |||||||||| || ||| |||||||||||| |||| |||||| |||||||||||    
T  9133763 acttaagaccctcacttttaagcgggatccgcactcttttaatattagaaaattgaaatataatgatataa 9133833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 3628225 - 3628265
Alignment:
Q  115 ttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  3628225 ttttaatattaaaaaattgagatgtaatgatataaagttat 3628265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 8569447 - 8569527
Alignment:
Q  196 tcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||| |||||  ||||||| |||||||||||||  ||| | ||| | ||||||| || ||||| ||||||||||||||||    
T  8569447 tcacaaaggtctttgactcatgattaaatacaaagtagtttatgaatgtgcactttcgttatcagtttagtccctgacgtt 8569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 12733998 - 12734077
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaa-tgtaatgatataaagtt 152  Q
    |||||||||||||| |  |||||||||  | |||| ||||  ||||||||||||||||| ||| |||||||||||||||||    
T  12733998 ggtctcacttaagaccaccaatcttaat-gtgacctacacttttttaatattaaaaaattaaaatgtaatgatataaagtt 12734077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 23036740 - 23036830
Alignment:
Q  63 taagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||| |||||||||||||||| |   ||| ||||||| |||||||||   ||||||||||||||||| ||| ||||||||||||||| ||||    
T  23036740 taagacccgaggtctcacttaa-atattcattcttaagtgggacccac-gtcttttaatattaaaaaattgatatgtaatgatataaaattat 23036830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 4e-47; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 155 - 299
Target Start/End: Original strand, 2591625 - 2591769
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||      
T  2591625 gagcaaatagtcactttagtccctgattctgcagcttgctgtcacataggtccctgactcaggattaaatacaaacaagtctctgactctgcacttccat 2591724  T
Q  255 tatcactttagtccctgacgttnnnnnnntctgttaagtgatgat 299  Q
     ||||||||||||||||| |||       ||||||||||||||||    
T  2591725 gatcactttagtccctgatgttaagttattctgttaagtgatgat 2591769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 276
Target Start/End: Original strand, 36278950 - 36279071
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||||||||||||| | ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  36278950 gagcaaatagtcactttagtccctgattatacagctcgttgtcacataggtccctgattcaggattaaatacaaataagtctctgactctgcacttccgt 36279049  T
Q  255 tatcactttagtccctgacgtt 276  Q
    ||||| ||||||||||||||||    
T  36279050 tatcattttagtccctgacgtt 36279071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 153 - 276
Target Start/End: Complemental strand, 17702046 - 17701923
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    ||||| ||||||| ||||||||| |||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  17702046 atgagtaaatagtcactttagtctctgattctgcagctcgctgtcatataggtccctgactcaagattaaatacaaataagtccctgactctgcacttcc 17701947  T
Q  253 gctatcactttagtccctgacgtt 276  Q
    | ||||||||||||||||||||||    
T  17701946 gttatcactttagtccctgacgtt 17701923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 153 - 276
Target Start/End: Original strand, 55388069 - 55388192
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    ||||||||||||| |||||||||||||||||||||||| | ||||| ||||||| |||||||||||||||||||||||||||  ||||||||||||| ||    
T  55388069 atgagcaaatagtcactttagtccctgattctgcagctcgctgtcatataggtctctgactcaggattaaatacaaataagttactgactctgcactccc 55388168  T
Q  253 gctatcactttagtccctgacgtt 276  Q
    | ||||||||||||||||||||||    
T  55388169 gttatcactttagtccctgacgtt 55388192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 153 - 273
Target Start/End: Complemental strand, 2592134 - 2592014
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    ||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||    
T  2592134 atgagcaaatagtcactttagtccctaattctgcagctcgctgtcacataggtccctgactcaggattaaatacaaataagtccctgactcaatacttcc 2592035  T
Q  253 gctatcactttagtccctgac 273  Q
    | |||||||||||||||||||    
T  2592034 gttatcactttagtccctgac 2592014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 155 - 276
Target Start/End: Original strand, 17700516 - 17700637
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||||||  ||| |||||| || | |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||     
T  17700516 gagcaaatagtcactttagtctttgactctgcacctcgttgtcacataggttcctgactcaggattaaatacaaataagtccctgactctgcacttccgt 17700615  T
Q  255 tatcactttagtccctgacgtt 276  Q
    ||||||||||||||||||||||    
T  17700616 tatcactttagtccctgacgtt 17700637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 156 - 276
Target Start/End: Original strand, 48572984 - 48573104
Alignment:
Q  156 agcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgct 255  Q
    |||||||||| ||||| |||||||| |||||| || | | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  48572984 agcaaatagtcactttggtccctgactctgcacctcgttatcacataggtccctgactcaggattaaatacaaataagcctctgactctgcacttccgtt 48573083  T
Q  256 atcactttagtccctgacgtt 276  Q
    ||||||||||||| |||||||    
T  48573084 atcactttagtccttgacgtt 48573104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 300
Target Start/End: Complemental strand, 52318444 - 52318297
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    ||||||||||||| ||||| ||| |||| ||||||  | | |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||     
T  52318444 atgagcaaatagtcactttggtctctgactctgcacttcgctgtcacatagatccctgactcaggattaaatacaaataagtccctgactctgcacttct 52318345  T
Q  253 gctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatg 300  Q
    | ||| ||||||||||||||||||       |||||||||||||||||    
T  52318344 gatattactttagtccctgacgttaaaaaaatctgttaagtgatgatg 52318297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 153 - 276
Target Start/End: Complemental strand, 47118178 - 47118055
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    |||||||||| || |||||||||||||| |||||| || | ||||| ||| ||||| ||||||||||||||| |||| |||||||||||||||||||| |    
T  47118178 atgagcaaatggtcactttagtccctgactctgcacctcgttgtcatataagtccccgactcaggattaaatgcaaagaagtctctgactctgcactttc 47118079  T
Q  253 gctatcactttagtccctgacgtt 276  Q
    | ||||||||||||||||||||||    
T  47118078 gttatcactttagtccctgacgtt 47118055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 194 - 276
Target Start/End: Complemental strand, 11773137 - 11773055
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  11773137 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctacacttccgttatcactttagtccctggcgtt 11773055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 155 - 301
Target Start/End: Original strand, 52316977 - 52317123
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||| | ||||||||| |||||||||||||| | ||||| ||||||| |||||||| |||||||||||||||||||| | ||||||||| ||||     
T  52316977 gagcaaataatcactttagtctctgattctgcagctcgctgtcatataggtctctgactcatgattaaatacaaataagtctttaactctgcacctccgt 52317076  T
Q  255 tatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||| |||||||| |||||||       ||||||||||||||||||    
T  52317077 tatcattttagtccatgacgttaaaaaaatctgttaagtgatgatgt 52317123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 196 - 276
Target Start/End: Complemental strand, 36280401 - 36280321
Alignment:
Q  196 tcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36280401 tcacataggtctctgactcaggattaaatataaataagtctctgactctgcacttccgttatcactttagtccctgacgtt 36280321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 273
Target Start/End: Original strand, 34263803 - 34263921
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| ||||| | |||||| |||||| || | ||||||| |||||| ||| |||||||||||||||||||||||||||||||| |||||||      
T  34263803 gagcaaatagtcactttggcccctgactctgcacctcgctgtcacagaggtccttgattcaggattaaatacaaataagtctctgactctacacttccat 34263902  T
Q  255 tatcactttagtccctgac 273  Q
    |||||||||| ||||||||    
T  34263903 tatcactttaatccctgac 34263921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 268
Target Start/End: Complemental strand, 33428564 - 33428447
Alignment:
Q  151 ttatgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcactt 250  Q
    |||||||||||| || ||||| |||||||| |||||| || | ||||||||||||||||||||||| |||||||||||| |||||  |||||||||| ||    
T  33428564 ttatgagcaaatggtcactttcgtccctgactctgcacctcgttgtcacataggtccctgactcagaattaaatacaaagaagtccttgactctgcattt 33428465  T
Q  251 ccgctatcactttagtcc 268  Q
    ||| | ||||||||||||    
T  33428464 ccgttgtcactttagtcc 33428447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 45601063 - 45600951
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    |||||||| || |||||||||||||| ||||   || | |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||     
T  45601063 gagcaaatcgtcactttagtccctgactctgtccctcgctgtcacataggtccctgattcaggattaaatacaaagaagtc-ctgactctgcacttccgt 45600965  T
Q  255 tatcactttagtcc 268  Q
    ||||||||||||||    
T  45600964 tatcactttagtcc 45600951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 276
Target Start/End: Complemental strand, 48574538 - 48574463
Alignment:
Q  201 taggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||||    
T  48574538 taggtccctgactcaggattaaatacaaataagtccctgactctgcactttcgttatcactttagtccttgacgtt 48574463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 276
Target Start/End: Complemental strand, 49261659 - 49261541
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||||||| | ||||  ||  ||| ||||||||||||||||||||||||||||||||||   |||||||| |||||||| |||||     
T  49261659 gagcaaatagtcactttagtccataattccacacattgttgtcacataggtccctgactcaggattaaataca---aagtctctaactctgcatttccgt 49261563  T
Q  255 tatcactttagtccctgacgtt 276  Q
    ||||||||||||| ||||||||    
T  49261562 tatcactttagtctctgacgtt 49261541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 48808380 - 48808478
Alignment:
Q  171 tagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccc 269  Q
    |||||||||||||||||||| | ||| | ||||||| |||||||||||||||||||||||||||  || |||||||||||||| | |||||||||||||    
T  48808380 tagtccctgattctgcagctcgctgttagataggtctctgactcaggattaaatacaaataagttcctaactctgcacttccgttgtcactttagtccc 48808478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 301
Target Start/End: Original strand, 20464079 - 20464213
Alignment:
Q  167 actttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    ||||||||||| || |||||| || | ||||||| ||||||||| |||| ||||||||||||| ||||| ||||||||||||||| | ||||||||||||    
T  20464079 actttagtccccgactctgcacctcgttgtcacaaaggtccctggctcatgattaaatacaaagaagtccctgactctgcacttctgttatcactttagt 20464178  T
Q  267 ccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||  ||||||       ||||||||||||||||||    
T  20464179 ccacgacgttaaataactctgttaagtgatgatgt 20464213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 160 - 301
Target Start/End: Original strand, 50753820 - 50753961
Alignment:
Q  160 aatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatca 259  Q
    |||||| ||||||||||||   |||||| || | |||||||||||||||| | ||||||||||||| ||| |||| ||||||||| |||||| | |||||    
T  50753820 aatagtcactttagtccctagctctgcacctcgctgtcacataggtccctaattcaggattaaatataaacaagtttctgactctacacttctgttatca 50753919  T
Q  260 ctttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    |||||||||||| ||||       ||||||||||||||||||    
T  50753920 ctttagtccctgccgttaaaaaaatctgttaagtgatgatgt 50753961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 276
Target Start/End: Original strand, 19114530 - 19114652
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||||||  | |||||||||||||| ||||||  | | ||||||| |||||||||||||| ||||||||||||| ||||| || ||| ||||||||||    
T  19114530 tgagcaaatgatcactttagtccctgactctgcacttcgttgtcacagaggtccctgactcaagattaaatacaaagaagtcactaactttgcacttccg 19114629  T
Q  254 ctatcactttagtccctgacgtt 276  Q
     ||||||||||||| || |||||    
T  19114630 ttatcactttagtctcttacgtt 19114652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 276
Target Start/End: Complemental strand, 53959186 - 53959104
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||||||||| |||||||| ||||||||||||||||||   |||||||||||||||| ||||||||||||| ||||||||    
T  53959186 tgtcacataggtctctgactcatgattaaatacaaataagttcatgactctgcacttccgttatcactttagtctctgacgtt 53959104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 276
Target Start/End: Complemental strand, 19115271 - 19115151
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||||| | ||| |||||| || | |||||||||||||| | ||||||||||||||||||| |||||  ||||||||||||||||     
T  19115271 gagcaaatagtcactttagttcgtgactctgcacctcgatgtcacataggtccttcactcaggattaaatacaaagaagtc-atgactctgcacttccgt 19115173  T
Q  255 tatcactttagtccctgacgtt 276  Q
    | | |||||||||||| |||||    
T  19115172 ttttactttagtccctaacgtt 19115151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 53957673 - 53957769
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    ||||||||||| |||||||| | |||||||||| || | ||| |||||||| |||||||||||| ||||||||||||||||| |||||||||||||||    
T  53957673 gagcaaatagtcactttagtacttgattctgcaactcgctgttacataggttcctgactcagga-taaatacaaataagtctatgactctgcacttcc 53957769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 55389592 - 55389480
Alignment:
Q  157 gcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgcta 256  Q
    ||||||||| ||||| |||||| | |||||| || | |||||||||||||  |||||||  ||||||||||| |||||| |||||||| |||||||| ||    
T  55389592 gcaaatagtcactttggtccctaactctgcacctcgctgtcacataggtcattgactcaaaattaaatacaattaagtccctgactctacacttccgtta 55389493  T
Q  257 tcactttagtccc 269  Q
    |||||||||||||    
T  55389492 tcactttagtccc 55389480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 276
Target Start/End: Complemental strand, 47075477 - 47075355
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    ||||||||| || |||||| ||| ||| |||||| || | |||||||||||||| | ||||| ||||||||||||| ||  | |||||||| ||||||||    
T  47075477 tgagcaaatggtcactttaatccttgactctgcacctcgttgtcacataggtccgtcactcaagattaaatacaaagaaacccctgactctacacttccg 47075378  T
Q  254 ctatcactttagtccctgacgtt 276  Q
     ||||||||||||| ||||||||    
T  47075377 ttatcactttagtctctgacgtt 47075355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 3671077 - 3671157
Alignment:
Q  196 tcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||| ||||| ||||||||| ||||||||||||||||||| ||||||| |||||||| |||||||||| |||||| ||||    
T  3671077 tcacaaaggtctctgactcagaattaaatacaaataagtctatgactctccacttccgttatcactttaatccctgccgtt 3671157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 19331118 - 19331183
Alignment:
Q  167 actttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataa 232  Q
    ||||| || ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  19331118 actttcgttcctgactctgcaccttgctgtcacataggtccctgactcaggattaaatacaaataa 19331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 52995822 - 52995740
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaa-aaaatgaaatgtaatgatataaagttat 154  Q
    |||||||||||||| |||||||||||| ||||| || ||| ||||||||||||| ||||| |||  |||||||||||||||||    
T  52995822 ggtctcacttaagatcctcaatcttaaacgggagcctcactcttttaatattaaaaaaattaaagataatgatataaagttat 52995740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 46048837 - 46048919
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||||||||||||| ||||||||||||| |||||||| ||  || ||||||||||||| ||  |||||||| |||||||||||    
T  46048837 ggtctcacttaagaccctcaatcttaagtgggacccaaacctttgtaatattaaaaaattgttatgtaatggtataaagttat 46048919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 33427791 - 33427860
Alignment:
Q  196 tcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    |||||||||||| ||| |||||||||||||||||| |  | |||||||||||||| || ||||||||||||    
T  33427791 tcacataggtccttgattcaggattaaatacaaatta-accctgactctgcactttcgttatcactttagt 33427860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 55272799 - 55272844
Alignment:
Q  110 cacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||    
T  55272799 cacacttttaatattaaaaaattgaaatataatgatataaagttat 55272844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 3993527 - 3993607
Alignment:
Q  74 gtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||||||||| ||||| | ||||| | || ||| |   ||||||||||||||| ||||||||||||||||||| ||||    
T  3993527 gtctcacttaagaccctcatttttaagtgcgatccatatttttttaatattaaaaattgaaatgtaatgatataaatttat 3993607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 26085011 - 26085103
Alignment:
Q  63 taagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||| | ||| |||||||| |  |||||||||| |||| |||||   |||||||||||||||| |||||| ||||| |||||||||||    
T  26085011 taagatccgggatcttacttaagatctccaatcttaagtgggatccacatttttttaatattaaaaaattgaaatataatggtataaagttat 26085103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 33291137 - 33291077
Alignment:
Q  92 aatcttaagcgggacccacacacttttaatattaaaaa-atgaaatgtaatgatataaagt 151  Q
    |||||||||||||||||||||  ||||||||| |||||  | |||||||||||||||||||    
T  33291137 aatcttaagcgggacccacactattttaatataaaaaagttaaaatgtaatgatataaagt 33291077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 47427897 - 47427953
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcactt 250  Q
    |||||||||||||| |||||||  |||||||||||| ||||| |||||| |||||||    
T  47427897 tgtcacataggtccttgactcaaaattaaatacaaagaagtccctgactgtgcactt 47427953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 41211980 - 41212019
Alignment:
Q  115 ttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  41211980 ttttaatattaaaaattaaaatgtaatgatataaagttat 41212019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 275
Target Start/End: Complemental strand, 48809697 - 48809659
Alignment:
Q  237 ctgactctgcacttccgctatcactttagtccctgacgt 275  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  48809697 ctgactctgcacttccgttatcactttagtccatgacgt 48809659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 3973564 - 3973484
Alignment:
Q  74 gtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||||||||| ||||| | ||||| | || ||| |   ||||||||||||||| | ||||||||||||||||| ||||    
T  3973564 gtctcacttaagaccctcatttttaagtgcgatccatatttttttaatattaaaaattaaaatgtaatgatataaatttat 3973484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 3996313 - 3996393
Alignment:
Q  74 gtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||||||||| ||||| | ||||| | || ||| |   ||||||||||||||| | ||||||||||||||||| ||||    
T  3996313 gtctcacttaagaccctcatttttaagtgcgatccatatttttttaatattaaaaattaaaatgtaatgatataaatttat 3996393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 4009839 - 4009919
Alignment:
Q  74 gtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||||||||| ||||| | ||||| | || ||| |   ||||||||||||||| | ||||||||||||||||| ||||    
T  4009839 gtctcacttaagaccctcatttttaagtgcgatccatatttttttaatattaaaaatttaaatgtaatgatataaatttat 4009919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 152
Target Start/End: Original strand, 35539498 - 35539597
Alignment:
Q  54 gggtcttattaagatccgaggtctcacttaagaacctc-aatcttaagcgggacccacacacttttaatattaaaaa-atgaaatgtaatgatataaagt 151  Q
    ||||||||| |||| |||| |||| |||||||| || | ||| ||||| ||||||| |||  |||||||||||||||  |||||| ||||||||||||||    
T  35539498 gggtcttat-aagacccgatgtcttacttaagaccccccaattttaagtgggacccgcacttttttaatattaaaaagttgaaatataatgatataaagt 35539596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 7e-46; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 155 - 301
Target Start/End: Original strand, 42278047 - 42278193
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||     
T  42278047 gagcaaatagtcactttagtccttgattctgcagcttgctgtcacataggtccctgactcgggattaaatacaaataagttcctgactctgcacttccgt 42278146  T
Q  255 tatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    |||||||||| |||||||||||       ||||||||||||||||||    
T  42278147 tatcactttaatccctgacgttaaaaaaatctgttaagtgatgatgt 42278193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 47874561 - 47874675
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||| ||||||| ||||||||| |||||||||||||| | | |||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  47874561 tgagtaaatagtcactttagtctctgattctgcagctcgctatcacataggtccctgactcaagattaaatacaaataagtccctgattctgcacttccg 47874660  T
Q  254 ctatcactttagtcc 268  Q
     ||||||||||||||    
T  47874661 ttatcactttagtcc 47874675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 154 - 276
Target Start/End: Complemental strand, 53771175 - 53771053
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    ||||||||| || |||||||||||||| |||||| || | ||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||    
T  53771175 tgagcaaatggtcactttagtccctgactctgcacctcgttgtcacataggtccctgactcagaattaaatacaaagaagcccctgactctgcacttccg 53771076  T
Q  254 ctatcactttagtccctgacgtt 276  Q
     |||||||||||||  |||||||    
T  53771075 ttatcactttagtcattgacgtt 53771053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 276
Target Start/End: Complemental strand, 47878608 - 47878488
Alignment:
Q  156 agcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgct 255  Q
    |||||||||| |||||  ||||||| |||||| || | ||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| |    
T  47878608 agcaaatagtcactttgatccctgactctgcacctcgctgttacataggtccctgactctggattaaatacaaataagtccctgactctacacttccgtt 47878509  T
Q  256 atcactttagtccctgacgtt 276  Q
    ||||||||||||| |||||||    
T  47878508 atcactttagtccatgacgtt 47878488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 276
Target Start/End: Original strand, 31844720 - 31844841
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| ||||||||||||   |||||| || | |||||||||||||||||||||||||||||||||||| ||||| || ||||| |||||||      
T  31844720 gagcaaatagtcactttagtccctagctctgcacctcgctgtcacataggtccctgactcaggattaaatacaaacaagtccctaactctacacttccct 31844819  T
Q  255 tatcactttagtccctgacgtt 276  Q
    ||||||||| ||| ||| ||||    
T  31844820 tatcactttggtcactgtcgtt 31844841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 160 - 268
Target Start/End: Complemental strand, 26173062 - 26172954
Alignment:
Q  160 aatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatca 259  Q
    |||||| |||||||||||  | | |||| |||  ||||| | |||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  26173062 aatagtcactttagtccccaactatgcaccttactgtcagaaaggtccttgactcaagattaaatacaaataagtctctgactctgcacttccgttatca 26172963  T
Q  260 ctttagtcc 268  Q
    |||||||||    
T  26172962 ctttagtcc 26172954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 4703343 - 4703230
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    ||||||||| || ||||||||  |||| ||| || || | |||||||||||||||| |||||| |||||||||||| |||||| ||||| | ||||||||    
T  4703343 tgagcaaattgtcactttagttactgactctacatctcgctgtcacataggtccctaactcagaattaaatacaaagaagtctttgactgtacacttccg 4703244  T
Q  254 ctatcactttagtc 267  Q
     |||||||||||||    
T  4703243 ttatcactttagtc 4703230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 5036121 - 5036044
Alignment:
Q  81 ttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttatgag 157  Q
    |||||| ||||||| ||||||||||| | ||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  5036121 ttaagaccctcaattttaagcgggactctcactcttttaatattaaaaaattgaaatgtaatgatataaagttatgag 5036044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 301
Target Start/End: Original strand, 50694795 - 50694893
Alignment:
Q  203 ggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    |||||||||||||  |||||||| |||||||| ||||| |||||||||||| |||| |||||||||||||||||       ||||||||||||||||||    
T  50694795 ggtccctgactcaaaattaaatataaataagtttctgattctgcacttccgttatctctttagtccctgacgttaaaaaattctgttaagtgatgatgt 50694893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 276
Target Start/End: Original strand, 39868918 - 39869039
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    ||||| |||| || ||||||||| |||| |||||| || | ||| ||| ||||||||||||||  |||||||||||| |||| || ||||||||||||||    
T  39868918 atgagtaaattgttactttagtctctgactctgcacctcgctgttacaaaggtccctgactcataattaaatacaaacaagt-tc-gactctgcacttcc 39869015  T
Q  253 gctatcactttagtccctgacgtt 276  Q
    | ||||||||||||| ||||||||    
T  39869016 gttatcactttagtctctgacgtt 39869039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 54574462 - 54574532
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcacttta 264  Q
    ||||||||||||| |||||||||||||||||||||||||||   | |||||||||||||| ||||||||||    
T  54574462 tgtcacataggtctctgactcaggattaaatacaaataagttcttaactctgcacttccgttatcacttta 54574532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 276
Target Start/End: Complemental strand, 48740145 - 48740024
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    |||||||| || |||||||||| ||  |||||| ||   |||||| ||| |||||||||||  |||||||||||| ||||| |  |||||||||||| |     
T  48740145 gagcaaatggtcactttagtccatgtctctgcacctcattgtcacgtagatccctgactcataattaaatacaaagaagtccccaactctgcacttctgt 48740046  T
Q  255 tatcactttagtccctgacgtt 276  Q
    ||||||||||||||||||||||    
T  48740045 tatcactttagtccctgacgtt 48740024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 276
Target Start/End: Original strand, 53770343 - 53770452
Alignment:
Q  167 actttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    ||||||||| |||| |||||| || |   |||||||||| |||||||||| |||||||||||| |||||| |||||||||||||||  ||||||| ||||    
T  53770343 actttagtctctgactctgcacctcgcattcacataggttcctgactcagaattaaatacaaagaagtctatgactctgcacttccattatcactctagt 53770442  T
Q  267 ccctgacgtt 276  Q
    | ||| ||||    
T  53770443 ctctgccgtt 53770452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 2574201 - 2574137
Alignment:
Q  91 caatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  2574201 caatcttaagcgggatccacactcttttaacattaaaaaattgaaatgtaatgatataaagttat 2574137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 299
Target Start/End: Original strand, 4701802 - 4701907
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgttnnnnnnntctgttaagt 293  Q
    ||||||| |||||  ||||| | ||||||||||||| ||||| | |||| ||||||||||||||||||||||||||||| |||       ||||||||||    
T  4701802 tgtcacaaaggtctatgacttatgattaaatacaaagaagtccccgactatgcacttccgctatcactttagtccctgatgttaaataattctgttaagt 4701901  T
Q  294 gatgat 299  Q
    ||||||    
T  4701902 gatgat 4701907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 8824901 - 8824999
Alignment:
Q  54 gggtcttattaagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaatgtaatgatataaagtta 153  Q
    ||||||||| |||||||| | ||| |||||||| || || | ||||||||||| ||||| |||||||||||||||| |||||| ||||||||||||||||    
T  8824901 gggtcttat-aagatccgggatcttacttaagaccc-cacttttaagcgggacgcacactcttttaatattaaaaattgaaatataatgatataaagtta 8824998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 35382527 - 35382452
Alignment:
Q  79 acttaagaacctcaatcttaagcgggacccacacacttttaata-ttaaaaaatgaaatgtaatgatataaagtta 153  Q
    |||||||| ||||| | ||||||||||||||||| ||||||||| ||||||| |||||| ||||||||||||||||    
T  35382527 acttaagaccctcacttttaagcgggacccacactcttttaatatttaaaaattgaaatataatgatataaagtta 35382452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 10180783 - 10180701
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||||||||  | |||||||||| |||||||| ||  |||||||||||||||| ||| ||||||||||||||||||||    
T  10180783 ggtctcacttaagacgcccaatcttaagtgggacccatacctttttaatattaaaaaattgatatgtaatgatataaagttat 10180701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 21621869 - 21621938
Alignment:
Q  203 ggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctga 272  Q
    |||||||||||||||||||||||||||  ||||  ||| | |||||||||| ||||||||||||||||||    
T  21621869 ggtccctgactcaggattaaatacaaaatagtcattgaatgtgcacttccgttatcactttagtccctga 21621938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 11346924 - 11347016
Alignment:
Q  63 taagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatatta-aaaaatgaaatgtaatgatataaagttat 154  Q
    ||||| ||| ||| |||||||||| |||||||||||||| || ||||||| |||||||||||| |||| | |||| |||||||||||| ||||    
T  11346924 taagacccggggtttcacttaagaccctcaatcttaagcagggcccacactcttttaatattataaaattaaaatataatgatataaaattat 11347016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 19051357 - 19051261
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcactt 250  Q
    ||||||||| || |||||||||||||| ||| || || | || |||| ||||| |||||||  ||||||||||||| |||||||||||||| |||||    
T  19051357 tgagcaaatggtcactttagtccctgactctacacctcgttggcacaaaggtcactgactcgagattaaatacaaagaagtctctgactctacactt 19051261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 19050298 - 19050357
Alignment:
Q  217 gattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||||||||| | ||||||    
T  19050298 gattaaatacaaagaagtctcggactctgcacttccgttatcactttagtctccgacgtt 19050357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 54574881 - 54574822
Alignment:
Q  204 gtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcacttt 263  Q
    |||| |||||||||||||||||||||||| ||||| |||||||||||| | |||||||||    
T  54574881 gtccttgactcaggattaaatacaaataaatctctaactctgcacttctgttatcacttt 54574822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 31262586 - 31262505
Alignment:
Q  74 gtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||||||| | ||||||||||  || || || || ||||||||||||||||| |||||||||||| |||||||||||    
T  31262586 gtctcacttaagaccttcaatcttaaatggaactcatactcttttaatattaaaaaattgaaatgtaatggtataaagttat 31262505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 273
Target Start/End: Complemental strand, 26685528 - 26685429
Alignment:
Q  169 tttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtcc 268  Q
    |||||||||||| |||||| || | |||||||||||||||| |||     ||||||||| | |||||  ||||| |||||||||| |||||||||||||     
T  26685528 tttagtccctgactctgcacctcgctgtcacataggtccctcact-----ttaaatacatagaagtccttgactatgcacttccgttatcactttagtct 26685434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 276
Target Start/End: Complemental strand, 25810491 - 25810417
Alignment:
Q  202 aggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    |||||||| | ||| |||||||||||||  || || ||| | |||||||||||||||||||||||| ||||||||    
T  25810491 aggtccctcattcaagattaaatacaaagtagcctatgaatgtgcacttccgctatcactttagtctctgacgtt 25810417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 268
Target Start/End: Complemental strand, 31845081 - 31844967
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||||||| | ||||||||   ||||| |||| |||| ||||| ||||||  |||||||||||||||||||||| || | |  |||||| ||||||||    
T  31845081 tgagcaaatactcactttagtttttgattttgcatcttgttgtcatataggtttctgactcaggattaaatacaaacaaattttagactctacacttccg 31844982  T
Q  254 ctatcactttagtcc 268  Q
     ||||| ||| ||||    
T  31844981 ttatcattttcgtcc 31844967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 263
Target Start/End: Complemental strand, 36453933 - 36453823
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    |||||||||| ||  ||||||||  |||||||||| || | | | ||| |||||||||| | |||||||||| |||| ||| |||||||||| |||||      
T  36453933 atgagcaaatggtccctttagtcattgattctgcatctcgctattacaaaggtccctgatttaggattaaatgcaaagaagcctctgactcttcactttt 36453834  T
Q  253 gctatcacttt 263  Q
    |||||||||||    
T  36453833 gctatcacttt 36453823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 49210982 - 49211063
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaa-tgtaatgatataaagttat 154  Q
    ||||| |||||||| ||||| | |||||||||| || | | |||||||||||||||||| ||| |||||||||||||||||||    
T  49210982 ggtcttacttaaga-cctcatttttaagcgggatcctcgctcttttaatattaaaaaattaaaatgtaatgatataaagttat 49211063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 26170638 - 26170751
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| | ||||||| |||| | |||| || | ||| ||| | ||  |||||| | ||||||||||||||||||  || |||||||||||||      
T  26170638 gagcaaatagttagtttagtctctgactttgcacctcgttgttacaaaagtatctgacttaagattaaatacaaataagttccttactctgcacttccat 26170737  T
Q  255 tatcactttagtcc 268  Q
    ||||||||||||||    
T  26170738 tatcactttagtcc 26170751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 44158502 - 44158591
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactct 244  Q
    |||||||| || | ||||| ||| || |||||| || | ||| ||| |||| ||||||||||||||||||||||| ||||| ||||||||    
T  44158502 gagcaaatggtcaatttagcccccgactctgcacctcgttgttacagaggttcctgactcaggattaaatacaaagaagtccctgactct 44158591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 30865887 - 30865927
Alignment:
Q  115 ttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  30865887 ttttaatattaaaaaattgaaatgtaatgatataaagttat 30865927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 267
Target Start/End: Complemental strand, 39870787 - 39870687
Alignment:
Q  167 actttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    |||||| || |||| |||||| || | ||||||||| || ||||| ||| ||||||| ||| | || || ||||||||||||||||| |||||||| |||    
T  39870787 actttaatctctgactctgcacctcgctgtcacataagttcctgagtcaagattaaacacagagaaatcactgactctgcacttccgatatcacttcagt 39870688  T
Q  267 c 267  Q
    |    
T  39870687 c 39870687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 43968726 - 43968817
Alignment:
Q  63 taagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||| ||||| ||||||||  | || | |||||| |||||||||| ||||||||||||||||| | |||| || ||||||||||||||    
T  43968726 taagatccggggtcttacttaagactc-cacttttaagcaggacccacactcttttaatattaaaaaattaaaatatagtgatataaagttat 43968817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 276
Target Start/End: Complemental strand, 21623192 - 21623121
Alignment:
Q  205 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||| |||||||||||||||||  ||||  ||| | |||||||| | ||||||||||||||| ||||||    
T  21623192 tccctgattcaggattaaatacaaaatagtccttgaatgtgcacttctgttatcactttagtccccgacgtt 21623121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 35332130 - 35332071
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    |||||| |||| | ||| |||||||||||||||||| ||||| |||||||||||||||||    
T  35332130 ttaagcaggacacgcactcttttaatattaaaaaattgaaatataatgatataaagttat 35332071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 6039166 - 6039232
Alignment:
Q  202 aggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtcc 268  Q
    |||| |||||||||  |||||||| ||||||||||||| || |||||||| | ||||| ||||||||    
T  6039166 aggttcctgactcaaaattaaatataaataagtctctggctatgcacttctggtatcattttagtcc 6039232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 40918134 - 40918069
Alignment:
Q  91 caatcttaagcgggacccacacacttttaatattaaaaa--atgaaatgtaatgatataaagttat 154  Q
    |||||||||||||||||| ||  ||| ||||||||||||   ||||||||| ||||||||||||||    
T  40918134 caatcttaagcgggacccgcagtcttctaatattaaaaattttgaaatgtattgatataaagttat 40918069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 52199739 - 52199832
Alignment:
Q  54 gggtcttattaagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatata 147  Q
    ||||||||| |||| ||| ||||| |||||||| ||  | | ||||| ||||||| ||| ||||||||||||||||| |||||| ||||||||||    
T  52199739 gggtcttat-aagacccggggtcttacttaagacccctacttttaagggggacccgcactcttttaatattaaaaaattgaaatataatgatata 52199832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 2786257 - 2786330
Alignment:
Q  193 gtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    |||||||| |||| | |||||||||||||||||||||| | ||  ||| | |||||||||| ||||| ||||||    
T  2786257 gtgtcacaaaggttcatgactcaggattaaatacaaattactccttgaatgtgcacttccgttatcattttagt 2786330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 42391974 - 42391933
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtc 235  Q
    ||||||||||||| |||||||| |||||||||||||| ||||    
T  42391974 tgtcacataggtctctgactcatgattaaatacaaattagtc 42391933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 822527 - 822467
Alignment:
Q  96 ttaagcgggacccacaca-cttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||||||| |||| |||| ||||||||||||||||| ||||||||| |||||||| |||||    
T  822527 ttaagcggaacccgcacaacttttaatattaaaaaattgaaatgtagtgatataatgttat 822467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 32244760 - 32244692
Alignment:
Q  208 ctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    |||| ||||||||||| |||||  ||||  ||| | ||||| |||| ||||||||||||||||||||||    
T  32244760 ctgattcaggattaaagacaaagtagtccttgaatgtgcacatccgttatcactttagtccctgacgtt 32244692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 35144361 - 35144424
Alignment:
Q  91 caatcttaagcgggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    |||| ||||| |||||||||| | ||||||||||||||||| ||||||||||| |||||| ||||    
T  35144361 caattttaagtgggacccacata-ttttaatattaaaaaattgaaatgtaatggtataaaattat 35144424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 39055158 - 39055198
Alignment:
Q  115 ttttaatattaaaaaatgaaa-tgtaatgatataaagttat 154  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  39055158 ttttaatattaaaaaattaaaatgtaatgatataaagttat 39055198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 7e-46; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 155 - 301
Target Start/End: Complemental strand, 32665895 - 32665749
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||     
T  32665895 gagcaaatagtcactttagtccctgattctgcagctcgctgtcacataggtctctgactcatgattaaatacaaataagtctttgactctgcacttccgt 32665796  T
Q  255 tatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||||||||||||||| ||||       ||||||||||||||||||    
T  32665795 tatcactttagtccctggcgttacaaaaatctgttaagtgatgatgt 32665749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 9339643 - 9339790
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    ||||||||||||  ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||| || | |||||||||||||||    
T  9339643 tgagcaaatagtccctttagtccctgattctgcagctcgttgttacataggtccctgactcaggattaaatacaaataaatccccgactctgcacttccg 9339742  T
Q  254 ctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
     ||||||||||||||||||||||       ||||||||||||||||||    
T  9339743 ttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgt 9339790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 154 - 276
Target Start/End: Complemental strand, 7945680 - 7945558
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||||||| | | ||| |||||||| |||||| || | |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  7945680 tgagcaaataatcattttggtccctgactctgcacctcgctgtcacataggttcctgactcaggattaaatacaaataagtctctgactatgcacttccg 7945581  T
Q  254 ctatcactttagtccctgacgtt 276  Q
     ||||||||||||||||||||||    
T  7945580 ttatcactttagtccctgacgtt 7945558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 301
Target Start/End: Complemental strand, 10333317 - 10333165
Alignment:
Q  149 agttatgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcac 248  Q
    |||| |||||||||||| ||| || || |||||||||||||| | ||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  10333317 agttttgagcaaatagtcactataatctctgattctgcagctcgctgttacataggtctctgactcaagattaaatacaaataagtctctgactctgcac 10333218  T
Q  249 ttccgctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||| ||||||||||||| ||  ||||       ||||||||||||||||||    
T  10333217 ttccgttatcactttagtctctagcgttaaaaaaatctgttaagtgatgatgt 10333165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 301
Target Start/End: Original strand, 52439477 - 52439619
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| ||||||| |||||||||||||||| | ||||||||||||| ||| |||||||||||||||| ||||||||    ||||||| |||||     
T  52439477 gagcaaatagtcactttagcccctgattctgcagctcgctgtcacataggtctctggctcaggattaaatacagataagtct----ctctgcatttccgt 52439572  T
Q  255 tatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||||||||||||||||||||       ||||||||||||||||||    
T  52439573 tatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgt 52439619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 299
Target Start/End: Original strand, 10332984 - 10333128
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||||||||||| | |||| || | |||||||||||||| ||| ||||||||||||| ||||||||| || ||||||||||||||     
T  10332984 gagcaaatagtcactttagtccctgactttgcacctcgttgtcacataggtccttgattcaggattaaatataaataagtcccttactctgcacttccgt 10333083  T
Q  255 tatcactttagtccctgacgttnnnnnnntctgttaagtgatgat 299  Q
    ||||| |||||||| |||||||       ||||||||||||||||    
T  10333084 tatcattttagtccttgacgttaaaaaaatctgttaagtgatgat 10333128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 196 - 276
Target Start/End: Complemental strand, 9341109 - 9341029
Alignment:
Q  196 tcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||    
T  9341109 tcacataggtccctgactcaggattaaatacaaataagtctctgactttgcacttctgttatcactttagtctctgacgtt 9341029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 155 - 276
Target Start/End: Original strand, 5782412 - 5782533
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    |||||||| || | |||||||||||| |||||| || | ||||||||||||| |||||||| ||||||||||||| |||||||||| | |||||||||      
T  5782412 gagcaaattgtcattttagtccctgactctgcacctcgctgtcacataggtctctgactcatgattaaatacaaagaagtctctgattatgcacttccct 5782511  T
Q  255 tatcactttagtccctgacgtt 276  Q
    ||||||||||||| ||||||||    
T  5782512 tatcactttagtctctgacgtt 5782533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 158 - 276
Target Start/End: Original strand, 6612420 - 6612538
Alignment:
Q  158 caaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctat 257  Q
    |||||||| |||||||||||||| |||||| || | ||| | | | ||| |||||||| ||||||||||||| ||||||||||||||||||||||  |||    
T  6612420 caaatagtcactttagtccctgactctgcacctcgctgttataaatgtctctgactcatgattaaatacaaacaagtctctgactctgcacttccattat 6612519  T
Q  258 cactttagtccctgacgtt 276  Q
    ||||||| |||||||||||    
T  6612520 cactttaatccctgacgtt 6612538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 276
Target Start/End: Original strand, 7944169 - 7944274
Alignment:
Q  171 tagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccct 270  Q
    |||||||||||| |||| || | ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||| || ||||| ||||||||||    
T  7944169 tagtccctgattttgcaactcgctgtcacataggtccctgactcaaaattaaatacaaataagtccttgactctgcactttcgttatcaatttagtccct 7944268  T
Q  271 gacgtt 276  Q
     |||||    
T  7944269 aacgtt 7944274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 52440645 - 52440572
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtc 267  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  52440645 tgtcacataggtccctgagtcaggattaaatataaataagtctctgactctgcacttccattatcactttagtc 52440572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 276
Target Start/End: Original strand, 22856677 - 22856799
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    ||||||||| || ||||||||| |||| |||||| |  | ||| ||| || | | ||||||||||||||||||||| |||||||| ||||||||||||||    
T  22856677 tgagcaaatggtcactttagtcactgactctgcaccacgttgttacaaagattcttgactcaggattaaatacaaagaagtctctaactctgcacttccg 22856776  T
Q  254 ctatcactttagtccctgacgtt 276  Q
     ||||||||||||| | ||||||    
T  22856777 ttatcactttagtctccgacgtt 22856799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 6614051 - 6613991
Alignment:
Q  208 ctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtcc 268  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||    
T  6614051 ctgactcaggattaaatacaaataagtctctgactctgcacttcagttatcattttagtcc 6613991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 3117647 - 3117757
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| | |||||||||| | ||| ||  | | | ||||| ||||| |||||||| ||||||||||||| || ||||||||||| ||||||||     
T  3117647 gagcaaatagtcattttagtccctaactcttcacatcgttatcacaaaggtctctgactcaagattaaatacaaagaaatctctgactctccacttccgt 3117746  T
Q  255 tatcactttag 265  Q
    |||||||||||    
T  3117747 tatcactttag 3117757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 5783195 - 5783122
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtc 267  Q
    |||||||||| |||  ||||||| |||||||||||| |||||  |||||||||||||||| |||||||||||||    
T  5783195 tgtcacatagatcctcgactcagaattaaatacaaagaagtccatgactctgcacttccgttatcactttagtc 5783122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 268
Target Start/End: Complemental strand, 50107316 - 50107215
Alignment:
Q  167 actttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    ||||| ||| ||||||||||| | || | ||||| ||||  |||| |||||||||||||||||  ||||||||| | |||||||||| ||||||||||||    
T  50107316 actttggtctctgattctgcaccatgttatcacaaaggttactgattcaggattaaatacaaaatagtctctgaatgtgcacttccgttatcactttagt 50107217  T
Q  267 cc 268  Q
    ||    
T  50107216 cc 50107215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 34088532 - 34088476
Alignment:
Q  217 gattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgac 273  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||| ||| ||||    
T  34088532 gattaaatacaaagaagtctctgactctgcacttccactatcactttaatccttgac 34088476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 42831622 - 42831681
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||||||||||| ||||    
T  42831622 ttaagcgggacccgcacacttttaatattaaaaaattaaaatgtaatgatataaaattat 42831681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 25037925 - 25037987
Alignment:
Q  204 gtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    |||||||||||| ||||||||||||| ||||| ||||||||| |||| || ||||||||||||    
T  25037925 gtccctgactcatgattaaatacaaagaagtcactgactctggacttacgttatcactttagt 25037987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 25043137 - 25043199
Alignment:
Q  204 gtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    |||||||||||| ||||||||||||| ||||| ||||||||| |||| || ||||||||||||    
T  25043137 gtccctgactcatgattaaatacaaagaagtcactgactctggacttacgttatcactttagt 25043199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 44665482 - 44665404
Alignment:
Q  77 tcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||||||||| || |||||||||||| ||| || || ||||||||||||||||| |||||| |||||||||||| ||||    
T  44665482 tcacttaagacccacaatcttaagcgagactcatactcttttaatattaaaaaattgaaatataatgatataaaattat 44665404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 27544334 - 27544407
Alignment:
Q  81 ttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaa-atgaaatgtaatgatataaagtta 153  Q
    |||||| || |||||||||| ||||||||||| ||||||||||||||||  |||||||||||||  ||||||||    
T  27544334 ttaagacccccaatcttaagtgggacccacactcttttaatattaaaaagttgaaatgtaatgacttaaagtta 27544407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 259
Target Start/End: Original strand, 44019983 - 44020088
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||||||  | ||||| |||||||| | |||| || | ||||||| | ||| |||||||| ||||||||| ||| |||||||||||||||||||| ||    
T  44019983 tgagcaaatgattactttggtccctgactttgcaactcgttgtcacaaaagtctctgactcaagattaaatataaagaagtctctgactctgcacttacg 44020082  T
Q  254 ctatca 259  Q
     |||||    
T  44020083 ttatca 44020088  T

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Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 47783841 - 47783741
Alignment:
Q  54 gggtcttattaagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagtt 152  Q
    ||||||||| |||| ||| ||||| |||||||| || || | ||||||||||| ||||| || |||||||||||||| |||||| |||||||||||| ||    
T  47783841 gggtcttat-aagacccggggtcttacttaagacccccacttttaagcgggactcacactctattaatattaaaaaattgaaatataatgatataaaatt 47783743  T
Q  153 at 154  Q
    ||    
T  47783742 at 47783741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 43822753 - 43822812
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||| ||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  43822753 ttaaacgggacctacactcttttaatattaaaaaattgaaatgtagtgatataaagttat 43822812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 1001162 - 1001264
Alignment:
Q  165 taactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcacttta 264  Q
    |||||||||||| ||| | |||| || | || |||| |||||| |||||| ||||||||||||||  ||||||||| | |||||||| | ||||| ||||    
T  1001162 taactttagtccatgactttgcacctcgttgccacaaaggtccatgactcgggattaaatacaaagtagtctctgaatgtgcacttctgttatcagttta 1001261  T
Q  265 gtc 267  Q
    |||    
T  1001262 gtc 1001264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 9505653 - 9505571
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||| ||||||||| ||||  ||||||| |||||||||||  |||||||||||||||| | | ||||||| ||||||||||||    
T  9505653 ggtcacacttaagaccctctttcttaagtgggacccacacctttttaatattaaaaaatttatatgtaataatataaagttat 9505571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 641925 - 641844
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    |||||||||||||| | ||| ||| ||| |  |||||||   ||||||||||||||| ||| ||||||||||||||||||||    
T  641925 ggtctcacttaagaccttcattctaaagtgaaacccacattgttttaatattaaaaattgatatgtaatgatataaagttat 641844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 24555931 - 24555871
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaa--tgaaatgtaatgatataaagttat 154  Q
    ||||||||||||| ||| |||||||||||||||||  |||||| |||||||||||| ||||    
T  24555931 ttaagcgggacccgcactcttttaatattaaaaaaattgaaatataatgatataaaattat 24555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 52353929 - 52353876
Alignment:
Q  102 gggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    |||||||| ||  ||||||||||||||||| |||||||||||||||||||||||    
T  52353929 gggacccatacttttttaatattaaaaaattgaaatgtaatgatataaagttat 52353876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 267
Target Start/End: Original strand, 8975169 - 8975269
Alignment:
Q  167 actttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    ||||| |||||| | | |||| |||| ||||||| |||||||||||||| ||||||||| |||  ||||  ||| | ||||||| || ||||||||||||    
T  8975169 actttggtccctaactttgcaccttgttgtcacaaaggtccctgactcaagattaaatataaagtagtccatgaatatgcactttcgttatcactttagt 8975268  T
Q  267 c 267  Q
    |    
T  8975269 c 8975269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 11567043 - 11566967
Alignment:
Q  74 gtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||||||| || |||||||||  |||||||||    |||| ||||||||||| ||||||||||||||||||||||||    
T  11567043 gtctcacttaagaccc-caatcttaaatgggacccac----tttttatattaaaaaaatgaaatgtaatgatataaagttat 11566967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 40287154 - 40287082
Alignment:
Q  74 gtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgata 145  Q
    |||| |||||||| || |||  |||||||||||||||||  |||||||||||||||| | |||||||||||||    
T  40287154 gtcttacttaagacccacaactttaagcgggacccacacctttttaatattaaaaaattaaaatgtaatgata 40287082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 1407660 - 1407759
Alignment:
Q  177 ctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    |||| |||||| |||| ||||||| |||||| ||||| | || |||||| |||  ||| ||||| | |||||||  | ||||||||||||||||||||||    
T  1407660 ctgactctgcaccttgttgtcacaaaggtccatgacttatgactaaatataaagtagtttctgaatatgcacttatgttatcactttagtccctgacgtt 1407759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 11570048 - 11570005
Alignment:
Q  112 cacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  11570048 cactttttatattaaaaaattgaaatgtaatgatataaagttat 11570005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 154
Target Start/End: Original strand, 28278063 - 28278142
Alignment:
Q  76 ctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaa-atgaaatgtaatgatataaagttat 154  Q
    ||||||||||| | |||||| |||||||||| |||||  |||||||||||||||  ||||||| |||| |||||| ||||    
T  28278063 ctcacttaagaccatcaatcataagcgggactcacactattttaatattaaaaatttgaaatgcaatgctataaaattat 28278142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 36297960 - 36298019
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    ||||||| ||||| |||  ||||||||||||||||| |||||||||||||||||| ||||    
T  36297960 ttaagcgagaccctcactattttaatattaaaaaattgaaatgtaatgatataaaattat 36298019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 38601113 - 38601050
Alignment:
Q  91 caatcttaagcgggacccacacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    |||||||||| |||| |||||    |||||||||||||| | ||||||||||||||||||||||    
T  38601113 caatcttaagtgggatccacaattctttaatattaaaaattaaaatgtaatgatataaagttat 38601050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 534639 - 534574
Alignment:
Q  198 acataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcacttta 264  Q
    |||||||| | ||| ||||||||||||||||| ||||| |||||||| |||||| | ||||||||||    
T  534639 acataggttcttgattcaggattaaatacaaacaagtc-ctgactctacacttctgttatcacttta 534574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 276
Target Start/End: Complemental strand, 11060870 - 11060788
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||| |||||| |||||||  ||||||||||||  |||| |||| |  |||||| || ||||||||||||||| ||||||    
T  11060870 tgtcacaaaggtccatgactcaaaattaaatacaaaatagtccctgaatgggcactttcgttatcactttagtccccgacgtt 11060788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 11120507 - 11120588
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacactttt-aatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||| |||||||| ||||| | |||||||||| || ||| ||||| ||||||||||| | |||| |||||||||||||||||    
T  11120507 ggtcttacttaaga-cctcacttttaagcgggatccgcactctttttaatattaaaaattaaaatataatgatataaagttat 11120588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 154
Target Start/End: Complemental strand, 11241633 - 11241567
Alignment:
Q  89 ctcaatcttaagcgggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    |||| ||||||| |||| ||||||  ||||||||||| ||||| ||||| |||||||||||||||||    
T  11241633 ctcattcttaagtgggatccacacttttttaatattataaaattgaaatataatgatataaagttat 11241567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 13984028 - 13984074
Alignment:
Q  109 acacacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||||    
T  13984028 acacgcttttaatattaaaaaattgaaatgtagtgatataaagttat 13984074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 32664564 - 32664623
Alignment:
Q  209 tgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||||||||||||||||||||        ||||||||||||| |||||||||||||| |||||||    
T  32664564 tgactcaggattaaatacaaataa--------ctctgcacttccgttatcactttagtccttgacgtt 32664623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 36166836 - 36166928
Alignment:
Q  63 taagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaa-tgtaatgatataaagttat 154  Q
    ||||||||  ||||| | |||||| || |||  ||||||||| ||| ||| |||||||||| ||||||| ||| |||| ||||||||||||||    
T  36166836 taagatccatggtcttatttaagacccccaactttaagcggggcccgcacgcttttaatatgaaaaaattaaaatgtagtgatataaagttat 36166928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 4e-44; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 150 - 276
Target Start/End: Original strand, 32764931 - 32765057
Alignment:
Q  150 gttatgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcact 249  Q
    |||||||| ||||||| |||||||||||||||||||||||| | ||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  32764931 gttatgagtaaatagtcactttagtccctgattctgcagctagttgtcatataggtctctgactcaggattaaatacaaataagtccctgactctgcact 32765030  T
Q  250 tccgctatcactttagtccctgacgtt 276  Q
    |||| |||||||||| |||||||||||    
T  32765031 tccgttatcactttaatccctgacgtt 32765057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 301
Target Start/End: Complemental strand, 17330355 - 17330209
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    |||||||||||  ||||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  17330355 gagcaaatagtcgctttagtccttgattctgcagctcactgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcatttccgt 17330256  T
Q  255 tatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    |||||||||||||| |||||||       ||||||||||||||||||    
T  17330255 tatcactttagtccatgacgttaagttattctgttaagtgatgatgt 17330209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 276
Target Start/End: Complemental strand, 31091652 - 31091531
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| ||||| |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  31091652 gagcaaatagtcactttggtccctgactctgcaccttgctgtcacataggtccctgactcaggattaaatacaaataagtccctgactctgcacttccgt 31091553  T
Q  255 tatcactttagtccctgacgtt 276  Q
    ||||||||||||| ||||||||    
T  31091552 tatcactttagtctctgacgtt 31091531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 152 - 276
Target Start/End: Complemental strand, 32766367 - 32766243
Alignment:
Q  152 tatgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttc 251  Q
    |||||||||||||| ||||| |||||||| |||||| || | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32766367 tatgagcaaatagtcactttggtccctgactctgcacctcgttgtcacataggtccctgactcaggattaaatacaaataagtccctgactctgcacttc 32766268  T
Q  252 cgctatcactttagtccctgacgtt 276  Q
    || |||||||||||||| |||||||    
T  32766267 cgttatcactttagtccttgacgtt 32766243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 158 - 276
Target Start/End: Original strand, 31090165 - 31090283
Alignment:
Q  158 caaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctat 257  Q
    |||||||| | |||||||||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  31090165 caaatagtcaatttagtccctgattctgcagctcgctgtcacataggtccttgactcaggattaaatataaataagtctctgactctgcacttccgttat 31090264  T
Q  258 cactttagtccctgacgtt 276  Q
     | ||||||||||||||||    
T  31090265 gattttagtccctgacgtt 31090283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 156 - 301
Target Start/End: Original strand, 7073638 - 7073783
Alignment:
Q  156 agcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgct 255  Q
    |||||||||| |||||||||| | ||||||||||||  |||| |||||||| |||| || ||||||||||||||||||||||||| |||||||||||| |    
T  7073638 agcaaatagtcactttagtccttcattctgcagcttactgtcgcataggtctctgattcgggattaaatacaaataagtctctgattctgcacttccgtt 7073737  T
Q  256 atcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    |||||||||||||||||||||       ||||||||||||||||||    
T  7073738 atcactttagtccctgacgttaagttattctgttaagtgatgatgt 7073783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 167 - 301
Target Start/End: Original strand, 2910110 - 2910244
Alignment:
Q  167 actttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    |||||||||  ||||| ||||||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  2910110 actttagtctttgattttgcagctcgctgtcacatagatccctgactcgggattaaatacaaataagtctctgactctgcacttcctttgtcactttagt 2910209  T
Q  267 ccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||||||||       ||||||||||||||||||    
T  2910210 ccctgacgttaaaaaaatctgttaagtgatgatgt 2910244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 154 - 276
Target Start/End: Original strand, 24458057 - 24458179
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||||||||| |||||||||||||||| ||||||| | | ||||||||||||||||||||  ||||||||||||||||| ||||||||| ||||| ||    
T  24458057 tgagcaaatagtcactttagtccctgattatgcagctcgctatcacataggtccctgactcaaaattaaatacaaataagtttctgactctacactttcg 24458156  T
Q  254 ctatcactttagtccctgacgtt 276  Q
     ||||||||||||| || |||||    
T  24458157 ttatcactttagtctctaacgtt 24458179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 273
Target Start/End: Complemental strand, 24459570 - 24459453
Alignment:
Q  156 agcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgct 255  Q
    |||||| ||| ||||| |||||||| |||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||   |    
T  24459570 agcaaagagtcactttggtccctgactctgcatctcgctgtcacataggtccctgaatcaggattaaatacaaataagtctctgaccctgcacttctatt 24459471  T
Q  256 atcactttagtccctgac 273  Q
    ||||||||||||||||||    
T  24459470 atcactttagtccctgac 24459453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 199 - 276
Target Start/End: Original strand, 14704048 - 14704125
Alignment:
Q  199 cataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||    
T  14704048 cataggtccctgactcaggattaaatacaaataagtccctcactctgcacttccgttatcactttagtccctgacgtt 14704125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 153 - 299
Target Start/End: Complemental strand, 40000461 - 40000315
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    |||| ||||| || ||||| |||||||| |||||| || | ||| |||||| ||||||| | |||||||||||||||||||||||| || ||||||||||    
T  40000461 atgaacaaattgtcactttggtccctgactctgcacctcgctgttacatagatccctgattgaggattaaatacaaataagtctctaaccctgcacttcc 40000362  T
Q  253 gctatcactttagtccctgacgttnnnnnnntctgttaagtgatgat 299  Q
    | |||||||||| |||||||||||       ||||||||||||||||    
T  40000361 gttatcactttattccctgacgttaagaaaatctgttaagtgatgat 40000315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 276
Target Start/End: Complemental strand, 39016507 - 39016387
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacat--aggtccctgactcaggattaaatacaaataagtctctgactctgcacttc 251  Q
    |||||||||||| ||||||||| |||||||||||||| | ||||||||  |  || ||||||||||||||||||||||||||||    ||||||||||||    
T  39016507 tgagcaaatagtcactttagtctctgattctgcagctcgctgtcacatacatctctctgactcaggattaaatacaaataagtc----actctgcacttc 39016412  T
Q  252 cgctatcactttagtccctgacgtt 276  Q
    || ||||||||||||| ||||||||    
T  39016411 cgttatcactttagtctctgacgtt 39016387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 160 - 266
Target Start/End: Complemental strand, 34037793 - 34037687
Alignment:
Q  160 aatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatca 259  Q
    |||||| |||||||||| ||| |||||| |||| ||||| | |||||| | |||||||||||||||||||||||||| |||||||||||||| | |||||    
T  34037793 aatagtcactttagtccttgactctgcaccttgctgtcataaaggtccataactcaggattaaatacaaataagtctatgactctgcacttctgttatca 34037694  T
Q  260 ctttagt 266  Q
    |||||||    
T  34037693 ctttagt 34037687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 17466914 - 17466807
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgttnnnnnnntctgttaagt 293  Q
    ||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||   ||||||       ||||||||||    
T  17466914 tgtcacataagccgctgactcaggattaaatacaaagaagtctctgactctgcacttccgttatcactttagtctaagacgttaaataattctgttaagt 17466815  T
Q  294 gatgatgt 301  Q
    ||||||||    
T  17466814 gatgatgt 17466807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 153 - 266
Target Start/End: Complemental strand, 2911618 - 2911505
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    ||||||||||||| ||||| ||| ||| |||||||||| | ||||||||| | || |||||||   ||||||| |||||||||||||||| |||||||||    
T  2911618 atgagcaaatagtcactttggtctctggttctgcagctcgctgtcacataaggccatgactcaaagttaaatataaataagtctctgactttgcacttcc 2911519  T
Q  253 gctatcactttagt 266  Q
    | ||||||||||||    
T  2911518 gttatcactttagt 2911505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 11921880 - 11921980
Alignment:
Q  54 gggtcttattaagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatga-aatgtaatgatataaagtt 152  Q
    ||||||||| |||| ||| ||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||    
T  11921880 gggtcttat-aagacccggggtcttacttaagacccccaatcttaagcgggactcacacacttttaatattaaaaaattagaatctaatgatataaagtt 11921978  T
Q  153 at 154  Q
    ||    
T  11921979 at 11921980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 153 - 276
Target Start/End: Complemental strand, 5915119 - 5914996
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    ||||||||||||| |||||||||| ||| |||||| || | | ||| |||||||  |||||||| |||||||||||| ||||| || |||||||||||||    
T  5915119 atgagcaaatagtcactttagtccatgactctgcacctcgctttcaaataggtctttgactcagaattaaatacaaagaagtcactaactctgcacttcc 5915020  T
Q  253 gctatcactttagtccctgacgtt 276  Q
    | |||||| ||| |||| ||||||    
T  5915019 gttatcaccttaatccccgacgtt 5914996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 276
Target Start/End: Complemental strand, 34582780 - 34582674
Alignment:
Q  170 ttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccc 269  Q
    ||||||||||| |||||| |||| ||| ||| |||||  |||||| ||||||||||||||  |||| |||| | |||||||||| |||||||||||||||    
T  34582780 ttagtccctgactctgcaccttgctgttacaaaggtcattgactcgggattaaatacaaagtagtccctgaatgtgcacttccgttatcactttagtccc 34582681  T
Q  270 tgacgtt 276  Q
    |||||||    
T  34582680 tgacgtt 34582674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 21733899 - 21733785
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcag---gattaaatacaaataagtctctgactctgcacttc 251  Q
    ||||||||||| ||| |||||||||| | || |  | | ||||||| ||||||||||||||    |||||||||||||||||||||||||||||||||||    
T  21733899 gagcaaatagtcactctagtccctgactttgtacatcgttgtcacaaaggtccctgactcatcatgattaaatacaaataagtctctgactctgcacttc 21733800  T
Q  252 cgctatcactttagt 266  Q
    ||  |||||||||||    
T  21733799 cgtcatcactttagt 21733785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 250
Target Start/End: Original strand, 39015002 - 39015098
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcactt 250  Q
    |||||||||| | ||||| |||||||| |||||| || | || ||||||| ||| ||||||||||||||||||||||| |||| |||||||||||||    
T  39015002 tgagcaaataatcacttttgtccctgactctgcacctcgctgccacatagatccttgactcaggattaaatacaaatacgtctttgactctgcactt 39015098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 275
Target Start/End: Original strand, 17466084 - 17466159
Alignment:
Q  200 ataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgt 275  Q
    |||||| | ||||||||||||||||||||| |  |||||||||||||||||||| | |||||||||||||||||||    
T  17466084 ataggttcttgactcaggattaaatacaaagatatctctgactctgcacttccgttttcactttagtccctgacgt 17466159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 40999632 - 40999714
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaa-aatgaaatgtaatgatataaagttat 154  Q
    |||||||||||||| ||||||||||||| |||||||||||   ||||||||||||| | |||||| |||||||||||||||||    
T  40999632 ggtctcacttaagaccctcaatcttaagtgggacccacacttgtttaatattaaaagattgaaatataatgatataaagttat 40999714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 31814422 - 31814354
Alignment:
Q  202 aggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccct 270  Q
    ||||| ||||||||| |||||||| ||| |||| | |||||||||||||||| ||||||||||||||||    
T  31814422 aggtctctgactcagaattaaatataaagaagtttttgactctgcacttccgttatcactttagtccct 31814354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 32887781 - 32887690
Alignment:
Q  63 taagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||| ||||| | |||||||| | ||||||||||  ||||||||||| ||||||||||||||||| | ||||||||| ||||||||||||    
T  32887781 taagatctgaggttttacttaagatc-tcaatcttaattgggacccacactcttttaatattaaaaaattaaaatgtaataatataaagttat 32887690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 26312428 - 26312507
Alignment:
Q  74 gtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    |||| |||||||| || ||||||||||||||  |||||| ||| |||||||||||||| |||||||||||| ||||||||||    
T  26312428 gtcttacttaagacccccaatcttaagcggg--ccacactcttctaatattaaaaaatagaaatgtaatgacataaagttat 26312507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 33161804 - 33161886
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||| ||||| ||| || |||||||||| |||| ||||||| |||| || ||||||| |||||||||||||| |||||||    
T  33161804 tgtcacaaaggtctctgccttaggattaaatgcaaagaagtctcagactatgtacttccgttatcactttagtccttgacgtt 33161886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 41068958 - 41068878
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||||||||||  |||||| ||||| |||||||||||  ||||| ||| ||||| |||||| |||||||||||||||||    
T  41068958 ggtctcacttaagactctcaattttaagtgggacccacactttttta-tataaaaaattgaaatataatgatataaagttat 41068878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 7412129 - 7412205
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccct 270  Q
    |||||||||| || |||||||| ||||||||| ||| ||||| ||||   |||||||||| ||||||||||||||||    
T  7412129 tgtcacatagatctctgactcaagattaaatataaagaagtcactgatagtgcacttccgttatcactttagtccct 7412205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 36266934 - 36267002
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaatgtaat 141  Q
    ||||||||||| || || |||||||||| | |||||||||  ||||||||||||||| |||||||||||    
T  36266934 ggtctcacttaggacccccaatcttaagtgagacccacactattttaatattaaaaattgaaatgtaat 36267002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 6562938 - 6562977
Alignment:
Q  115 ttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  6562938 ttttaatattaaaaattgaaatgtaatgatataaagttat 6562977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 9733611 - 9733686
Alignment:
Q  79 acttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    |||||||| ||| | ||||||||| ||||| ||| |||||||||||||||| |||||||||  |||||||| ||||    
T  9733611 acttaagaccctaactcttaagcgagaccctcactcttttaatattaaaaattgaaatgtagagatataaaattat 9733686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 26297092 - 26297151
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||  ||||||||||||||    
T  26297092 ttaagcggggcccacacacatttaatattaaaaaattgaaatgtggtgatataaagttat 26297151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 38985060 - 38984993
Alignment:
Q  209 tgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    |||||| | |||||||||||| |||||  |||||||||||||||| ||||||||||||| || |||||    
T  38985060 tgactcggaattaaatacaaagaagtccttgactctgcacttccgttatcactttagtcactaacgtt 38984993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 34234847 - 34234920
Alignment:
Q  81 ttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    |||||| | |||||||||||  | ||||||||  ||||||||||||||||| |||||||||||||||||||||||    
T  34234847 ttaagaccttcaatcttaagtagaacccacact-ttttaatattaaaaaattgaaatgtaatgatataaagttat 34234920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 38853800 - 38853874
Alignment:
Q  202 aggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||| ||||||||||||||||||||||  |||| || | | |||||||||| ||||| ||||||| ||||||||    
T  38853800 aggtctctgactcaggattaaatacaaagtagtccctaaatgtgcacttccgttatcaatttagtcactgacgtt 38853874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 5914347 - 5914423
Alignment:
Q  200 ataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||| ||||||||  |||||||||||| |||||  ||||| |||||| ||| ||||||||||| || |||||||    
T  5914347 ataggtctctgactcacaattaaatacaaagaagtcagtgactttgcactcccgttatcactttagaccatgacgtt 5914423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 30465205 - 30465273
Alignment:
Q  63 taagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaat 131  Q
    ||||| ||||||||| |||||| ||| ||| | |||||||| |||| ||| ||||||||||||||||||    
T  30465205 taagacccgaggtcttacttaataacttcacttttaagcggtacccccactcttttaatattaaaaaat 30465273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 37648643 - 37648559
Alignment:
Q  70 cgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||||||||||||| |  ||||| ||||  || |||||||  || |||||| ||||| |||||||| |||||||||||||||    
T  37648643 cgaggtctcacttaagacctccaatcctaagtaggccccacacttttataatataaaaaattgaaatgtgatgatataaagttat 37648559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 34375046 - 34375085
Alignment:
Q  115 ttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  34375046 ttttaatattaaaaattgaaatgtaataatataaagttat 34375085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 36887716 - 36887657
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||| |||||||| ||| ||||||||||||||||| ||||||| ||||||||||| ||||    
T  36887716 ttaaacgggaccctcactcttttaatattaaaaaattgaaatgcaatgatataaatttat 36887657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 37347995 - 37347928
Alignment:
Q  87 acctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    |||||||||||||| ||||| |||||  |||||||| |||||| | | |||||||| |||||||||||    
T  37347995 acctcaatcttaagtgggactcacacctttttaatagtaaaaattaatatgtaatggtataaagttat 37347928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 45135739 - 45135798
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaa-aaatgaaatgtaatgatataaagttat 154  Q
    ||||||| ||||| ||| |||||||||||||| || |||||| |||||||||||||||||    
T  45135739 ttaagcgagacccgcactcttttaatattaaataactgaaatataatgatataaagttat 45135798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 5038666 - 5038723
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaat 131  Q
    |||||||||||||| | ||||||||||||||||| ||||   |||||||||||||||||    
T  5038666 ggtctcacttaagatc-tcaatcttaagcgggacacacaatattttaatattaaaaaat 5038723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 11985736 - 11985810
Alignment:
Q  202 aggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||| ||||||||||||||||||||||  |||||||||   |||| || || ||||| |||||||||| |||||    
T  11985736 aggtctctgactcaggattaaatacaaagtagtctctgaaggtgcattttcgttatcagtttagtccctaacgtt 11985810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 12746279 - 12746213
Alignment:
Q  202 aggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtcc 268  Q
    |||| |||||||||||||||||||||||  |||  |||| | ||| |||||| ||||||||||||||    
T  12746279 aggttcctgactcaggattaaatacaaagtagttcctgaatgtgcccttccgttatcactttagtcc 12746213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 21732163 - 21732216
Alignment:
Q  210 gactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    |||||||||||||||||||||||||   |||||||| ||||||| ||| ||||||||    
T  21732163 gactcaggattaaatacaaataagt---tgactctgtacttccgttattactttagt 21732216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 147
Target Start/End: Complemental strand, 4755433 - 4755401
Alignment:
Q  115 ttttaatattaaaaaatgaaatgtaatgatata 147  Q
    ||||||||||||||||| |||||||||||||||    
T  4755433 ttttaatattaaaaaataaaatgtaatgatata 4755401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 26586367 - 26586299
Alignment:
Q  208 ctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    |||||||| ||||||||| |||  ||||| ||| | |||||||||| ||||||||||||| ||| ||||    
T  26586367 ctgactcaagattaaatataaagtagtctttgaatgtgcacttccgttatcactttagtctctggcgtt 26586299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 276
Target Start/End: Original strand, 37607189 - 37607221
Alignment:
Q  244 tgcacttccgctatcactttagtccctgacgtt 276  Q
    |||||||||| ||||||||||||||||||||||    
T  37607189 tgcacttccgttatcactttagtccctgacgtt 37607221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 43380617 - 43380665
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgact 242  Q
    ||||||| ||||| |||||||| ||||||||||| | ||||||||||||    
T  43380617 tgtcacaaaggtctctgactcatgattaaatacatagaagtctctgact 43380665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 301
Target Start/End: Original strand, 4592859 - 4593005
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||||||||||||| || |||| | ||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||     
T  4592859 gagcaaatagtcactttagtccctgattatgtagctcgctgtcacataagtccctgactcaagattaaatacaaataagtccctgactctgcacttccgt 4592958  T
Q  255 tatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||||||||||||||||||||       ||||||||||||||||||    
T  4592959 tatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgt 4593005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 276
Target Start/End: Original strand, 8074449 - 8074570
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||     
T  8074449 gagcaaatagtcactttagtccctgattatgcagctcgctgtcacataagtccctgactcaggattaaatacaaataagtccctgactctgcacttccgt 8074548  T
Q  255 tatcactttagtccctgacgtt 276  Q
    |||||||||||| |||||||||    
T  8074549 tatcactttagttcctgacgtt 8074570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 152 - 276
Target Start/End: Complemental strand, 546163 - 546040
Alignment:
Q  152 tatgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttc 251  Q
    |||||||||||||| ||||||||||| |||| ||||||| | |||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  546163 tatgagcaaatagtcactttagtccc-gattttgcagctcgctgtcacataggtccctgactcaggattaaatacagataagtccttgactctgcacttc 546065  T
Q  252 cgctatcactttagtccctgacgtt 276  Q
    || ||||||||||||||||||||||    
T  546064 cgttatcactttagtccctgacgtt 546040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 155 - 276
Target Start/End: Original strand, 2464667 - 2464788
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| ||||||||| |||||||||||||| | ||||| |||||||| ||||||| ||||||||||||||||||| || ||||||||||| ||     
T  2464667 gagcaaatagtcactttagtcactgattctgcagctcgctgtcatataggtccatgactcatgattaaatacaaataagtccctaactctgcacttacgt 2464766  T
Q  255 tatcactttagtccctgacgtt 276  Q
    ||||||||||||| ||||||||    
T  2464767 tatcactttagtctctgacgtt 2464788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 155 - 276
Target Start/End: Complemental strand, 28591239 - 28591118
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||  ||||||| |||||| || | ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||      
T  28591239 gagcaaatagtcactttgatccctgactctgcacctcgctgtcacataggtccctgactcaggattaaatacaaataaatccctgactctgcacttcctt 28591140  T
Q  255 tatcactttagtccctgacgtt 276  Q
    ||||||||||||||| ||||||    
T  28591139 tatcactttagtccccgacgtt 28591118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 299
Target Start/End: Complemental strand, 40612784 - 40612640
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||||||||||||| |||||||   |||||| ||||||||||||||||||||||||||| |||  |  |||||||||||||||||     
T  40612784 gagcaaatagtcactttagtccctgattttgcagctcactgtcacgtaggtccctgactcaggattaaatacagatattttcctgactctgcacttccgt 40612685  T
Q  255 tatcactttagtccctgacgttnnnnnnntctgttaagtgatgat 299  Q
    |||||||||| | |||||||||       ||||||||||||||||    
T  40612684 tatcactttaattcctgacgttaaaaaaatctgttaagtgatgat 40612640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 272
Target Start/End: Complemental strand, 9538174 - 9538057
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| ||||| |||||||| |||||| || | ||||| |||||||||||||||||||||||||||||| |||||||||| | ||||||||||     
T  9538174 gagcaaatagtcactttggtccctgactctgcatctcgttgtcatataggtccctgactcaggattaaatacaaagaagtctctgattgtgcacttccgt 9538075  T
Q  255 tatcactttagtccctga 272  Q
    ||||| ||||||| ||||    
T  9538074 tatcattttagtctctga 9538057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 155 - 276
Target Start/End: Complemental strand, 2466899 - 2466778
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| ||||| ||| |||| |||||| || | | |||||||||||  ||| ||||||||||||| ||||||||| || ||||||||||||||     
T  2466899 gagcaaatagtcactttggtctctgactctgcacctcgctatcacataggtcattgattcaggattaaataaaaataagtccctaactctgcacttccgt 2466800  T
Q  255 tatcactttagtccctgacgtt 276  Q
    ||||||||||||||||||||||    
T  2466799 tatcactttagtccctgacgtt 2466778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 264
Target Start/End: Original strand, 21069284 - 21069396
Alignment:
Q  152 tatgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttc 251  Q
    |||||||||||||| ||||||||| |||| |||||| || | ||||||| ||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  21069284 tatgagcaaatagtcactttagtctctgactctgcacctcgttgtcacagaggtctctgactcaggattaaatacaaataagtccttgactctgcacttc 21069383  T
Q  252 cgctatcacttta 264  Q
     | | ||||||||    
T  21069384 tgttttcacttta 21069396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 276
Target Start/End: Original strand, 25590428 - 25590549
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||||||||| |||||  |  |||| |||||| || | ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |    
T  25590428 tgagcaaatagtcactttgttttctgactctgcacctcgctgtcacataggtccctgactc-ggattaaatacaaataagtctctgattctgcacttctg 25590526  T
Q  254 ctatcactttagtccctgacgtt 276  Q
     |||||||||| || ||||||||    
T  25590527 ttatcactttaatctctgacgtt 25590549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 276
Target Start/End: Original strand, 16611722 - 16611847
Alignment:
Q  151 ttatgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcactt 250  Q
    |||||||||||| || |||||| | | ||| ||| || || | ||||||||||||| |||||||||||||||||||||| ||| |||||| | |||||||    
T  16611722 ttatgagcaaatggtcactttaattcttgactctacacctcgctgtcacataggtctctgactcaggattaaatacaaagaagcctctgattatgcactt 16611821  T
Q  251 ccgctatcactttagtccctgacgtt 276  Q
    ||| ||||||||||||| ||||||||    
T  16611822 ccgttatcactttagtctctgacgtt 16611847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 19182949 - 19183061
Alignment:
Q  156 agcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgct 255  Q
    |||||||||| |||||||  | ||| | |||| || | ||||||||||||| |||||||||||||||||||||||||||  |||||||| |||||||| |    
T  19182949 agcaaatagttactttagaacttgactttgcacctcgctgtcacataggtctctgactcaggattaaatacaaataagttcctgactctacacttccgtt 19183048  T
Q  256 atcactttagtcc 268  Q
    |||||||||||||    
T  19183049 atcactttagtcc 19183061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 276
Target Start/End: Complemental strand, 32641812 - 32641730
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    |||||| ||||||||| ||||| ||||||||||||||||||  ||||||||||||||||| |||||||||| |||||||||||    
T  32641812 tgtcacgtaggtcccttactcaagattaaatacaaataagttgctgactctgcacttccgttatcactttaatccctgacgtt 32641730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 154 - 276
Target Start/End: Complemental strand, 14891269 - 14891151
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||||||||| ||||| |||||| | |||||| || | ||||||||||||| |||||||| |||||||| |    |||||||||||||| ||||||||    
T  14891269 tgagcaaatagtcactttggtccctcactctgcacctcgctgtcacataggtctctgactcatgattaaatgc----aagtctctgactctacacttccg 14891174  T
Q  254 ctatcactttagtccctgacgtt 276  Q
     ||||||||||||| ||||||||    
T  14891173 ttatcactttagtctctgacgtt 14891151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 19186305 - 19186232
Alignment:
Q  195 gtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtcc 268  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| || ||||| ||||||||||||||    
T  19186305 gtcacataggtccctgacttaggattaaatacaaacaagtctctgactctacatttccgttatcactttagtcc 19186232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 266
Target Start/End: Original strand, 544668 - 544757
Alignment:
Q  176 cctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    ||||| |||||| ||| |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||||    
T  544668 cctgactctgca-cttcgtgtcagataggtctctgactcaggattaaatacaaataagtcactgactctgcacttccgttataaatttagt 544757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 301
Target Start/End: Complemental strand, 8075958 - 8075812
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    |||||||||||  |||| |||  ||| |||||| || | ||| | |||| ||||||| ||| ||||||||||||| |||| ||||| ||||||||| ||     
T  8075958 gagcaaatagtcgctttggtcattgactctgcacctcgctgttagatagatccctgattcaagattaaatacaaaaaagtatctgattctgcactttcgt 8075859  T
Q  255 tatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||||||||||||||||||||       ||||||||||||||||||    
T  8075858 tatcactttagtccctgacgtttaaaaaatctgttaagtgatgatgt 8075812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 18400200 - 18400284
Alignment:
Q  167 actttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttc 251  Q
    |||||||||||||| |||||| ||   |||||||||||||| ||||||||||||||||| ||| ||||| |||||||||||||||    
T  18400200 actttagtccctgactctgcacctcactgtcacataggtccttgactcaggattaaataaaaagaagtcactgactctgcacttc 18400284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 276
Target Start/End: Original strand, 9537024 - 9537141
Alignment:
Q  158 caaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctat 257  Q
    ||||| || |||||||||||| | |||||| || | ||||||||||||| |||||| || |||||||||||| |||||  ||||| |||||||||  |||    
T  9537024 caaatggtgactttagtccctcactctgcacctcgctgtcacataggtctctgacttagaattaaatacaaagaagtc-atgactgtgcacttccattat 9537122  T
Q  258 cactttagtccctgacgtt 276  Q
    |||||||||| ||||||||    
T  9537123 cactttagtcactgacgtt 9537141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 15468291 - 15468210
Alignment:
Q  74 gtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||||| | | |||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||| ||||    
T  15468291 gtctcacttaaaagcgtcaatcttaagcggtacccacactcttttaatattaaaaaattgaaatttaatgatataaaattat 15468210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 13651246 - 13651173
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaataca 227  Q
    ||||||||||||| |||||||||| ||| | |||| || | ||||||||||||||||||||||||||||||||||    
T  13651246 atgagcaaatagtcactttagtccttgactgtgcacct-gctgtcacataggtccctgactcaggattaaataca 13651173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 32640325 - 32640407
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||||||| || | ||||||||||||||||||||||||| || |||||  ||||| | ||||||||||||| ||||||||    
T  32640325 tgtcacataggaccataactcaggattaaatacaaataagtccctaactctaaacttctgttatcactttagtctctgacgtt 32640407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 31947158 - 31947050
Alignment:
Q  159 aaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatc 258  Q
    ||||||| ||||||||| |||||||||||  ||| ||||| |||| | ||| ||| |  |||||||||||| |||||| |||||||  ||||||| ||||    
T  31947158 aaatagtcactttagtctctgattctgcactttgttgtcatatagattccttacttaaaattaaatacaaacaagtctatgactctagacttccgttatc 31947059  T
Q  259 actttagtc 267  Q
    |||||||||    
T  31947058 actttagtc 31947050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 4594174 - 4594080
Alignment:
Q  205 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||  |||||||| | ||||| |||||       ||||||||||||||||||    
T  4594174 tccctgactcaggattaaatacaaataagtca-tgactctgcacttccattatcacttaa-tcccttacgttaaaaagatctgttaagtgatgatgt 4594080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 12593080 - 12593162
Alignment:
Q  74 gtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa--tgaaatgtaatgatataaagttat 154  Q
    ||||||||||||| || |||| ||||||   |||||||| |||||||||||||||||  | ||||||||||||||||||||||    
T  12593080 gtctcacttaagacccccaattttaagcaaaacccacactcttttaatattaaaaaagttaaaatgtaatgatataaagttat 12593162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 301
Target Start/End: Original strand, 16978996 - 16979136
Alignment:
Q  161 atagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcac 260  Q
    ||||| |||||||||| ||| | |||| |||| || |||| |||||  |||||||| ||||||| |||||||||| || |||||| |||| || |||||     
T  16978996 atagtcactttagtccttgactttgcaccttgctgccacaaaggtcattgactcagaattaaatgcaaataagtccctaactctgtacttacgttatcat 16979095  T
Q  261 tttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||||| || |||||       ||||||||||||||||||    
T  16979096 tttagtctctaacgttaagttattctgttaagtgatgatgt 16979136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 41521032 - 41520950
Alignment:
Q  72 aggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||||| |||||||| ||||||||||||| |||||||||||  |||||||| ||||||| ||| |||||||| |||||||||||    
T  41521032 aggtctaacttaaga-cctcaatcttaagtgggacccacacctttttaatagtaaaaaattgatatgtaatggtataaagttat 41520950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 18004696 - 18004753
Alignment:
Q  215 aggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctga 272  Q
    ||||||||||||||| | |||| |||||||||||||||| ||||||||||||| ||||    
T  18004696 aggattaaatacaaagaggtctatgactctgcacttccgttatcactttagtctctga 18004753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 13483063 - 13483126
Alignment:
Q  200 ataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcacttt 263  Q
    |||||| ||||||||| ||||||||| ||| |||||||| ||||||||||| || |||||||||    
T  13483063 ataggttcctgactcatgattaaatataaagaagtctcttactctgcactttcgttatcacttt 13483126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 301
Target Start/End: Original strand, 28589739 - 28589843
Alignment:
Q  197 cacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgttnnnnnnntctgttaagtgat 296  Q
    |||||||||||||||||||  ||||||||||||||  | | ||||| || ||||||| || || ||||||| ||||||||       |||||||||||||    
T  28589739 cacataggtccctgactcataattaaatacaaatacatttttgactttgtacttccgttaccattttagtctctgacgttaaaaaaatctgttaagtgat 28589838  T
Q  297 gatgt 301  Q
    |||||    
T  28589839 gatgt 28589843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 14881010 - 14881056
Alignment:
Q  220 taaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||||    
T  14881010 taaacacaaataagtccctgactctgcacttccgttatcactttagt 14881056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 13483218 - 13483174
Alignment:
Q  218 attaaatacaaataagtctctgactctgcacttccgctatcactt 262  Q
    |||||||||||| |||||||||||| |||||||||| ||||||||    
T  13483218 attaaatacaaacaagtctctgactttgcacttccgttatcactt 13483174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 7293041 - 7293082
Alignment:
Q  114 cttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  7293041 cttttaatattaaaaaattgaaatgtaatgatataatgttat 7293082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 13486580 - 13486620
Alignment:
Q  115 ttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  13486580 ttttaatattaaaaaattgaaatataatgatataaagttat 13486620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 3e-42; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 153 - 301
Target Start/End: Original strand, 7258271 - 7258419
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    ||||||||||||| ||||| |||||||| ||| || || | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  7258271 atgagcaaatagtcactttggtccctgactctacacctcgttgtcacataggtccctaactcaggattaaatacaaataagtctctgactctgcacttct 7258370  T
Q  253 gctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    | ||||||||||||||||||||||       ||||||||||||||||||    
T  7258371 gttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgt 7258419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 159 - 301
Target Start/End: Original strand, 43457459 - 43457601
Alignment:
Q  159 aaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatc 258  Q
    ||||||| |||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  43457459 aaatagtcactttagtccctgattctgcagctcgctgtcgcataggtccctgactcaggattaaatacaaataagtccccgactctgcacttccgttatc 43457558  T
Q  259 actttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    |||||||| | |||||||       ||||||||||||||||||    
T  43457559 actttagttcatgacgttaagttattctgttaagtgatgatgt 43457601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 155 - 299
Target Start/End: Complemental strand, 48647568 - 48647424
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| ||||||| |||||||||| ||||| | | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |     
T  48647568 gagcaaatagtcactttagaccctgattctacagctcgctatcacataggtccctgactcaggattaaatacaaataagtctctcactctgcacttttgt 48647469  T
Q  255 tatcactttagtccctgacgttnnnnnnntctgttaagtgatgat 299  Q
    ||||||||||||||||||||||       ||||||||||||||||    
T  48647468 tatcactttagtccctgacgttaaaaaaatctgttaagtgatgat 48647424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 154 - 276
Target Start/End: Original strand, 48777253 - 48777375
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||||||||| ||||||||| |||||||||||||| | ||||||||| |||||||||||| |||||||||||||||| || |||||||||||||||||    
T  48777253 tgagcaaatagtcactttagtctctgattctgcagctcgctgtcacataagtccctgactcatgattaaatacaaataattccctgactctgcacttccg 48777352  T
Q  254 ctatcactttagtccctgacgtt 276  Q
     |||||||||||||| |||||||    
T  48777353 ttatcactttagtccatgacgtt 48777375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 155 - 301
Target Start/End: Complemental strand, 35729211 - 35729065
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||| ||||||||| ||||||| | |||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  35729211 gagcaaatagtcactttattccctgattttgcagctcgctgtcacataggtccttgacttaggattacatacaaataagtcactgactctgcacttccgc 35729112  T
Q  255 tatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||||| ||||||||||| ||       ||||||||||||||||||    
T  35729111 tatcactgtagtccctgacattaaataaatctgttaagtgatgatgt 35729065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 153 - 273
Target Start/End: Complemental strand, 44334576 - 44334456
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    ||||||||||||| |||||||| ||||||||||||||| | ||| |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  44334576 atgagcaaatagtcactttagttcctgattctgcagctcgctgttacataggtccctgactcatgattaaatataaataagtccctgactctgcacttcc 44334477  T
Q  253 gctatcactttagtccctgac 273  Q
      |||||||||||||||||||    
T  44334476 attatcactttagtccctgac 44334456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 153 - 301
Target Start/End: Complemental strand, 10899200 - 10899052
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    ||||| |||| || ||||| |||||||| |||||| || | |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||    
T  10899200 atgagtaaattgttactttggtccctgactctgcacctcgctgtcacatagatccttgacccaggattaaatacaaataagtctctgactctgcacttcc 10899101  T
Q  253 gctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    | ||||||||||||||||||||||       ||||||||||||||||||    
T  10899100 gttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgt 10899052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 156 - 301
Target Start/End: Original strand, 44333138 - 44333281
Alignment:
Q  156 agcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgct 255  Q
    |||||||||| ||||| |||||||| |||||| || | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  44333138 agcaaatagtcactttggtccctgactctgcacctcgctgtcacataggtccctgactcatgattaaatacaaataagtctctgactctgcacttccgtt 44333237  T
Q  256 atcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    |||||  |||||| |||||||       ||||||||||||||||||    
T  44333238 atcac--tagtccttgacgttaaaaaaatctgttaagtgatgatgt 44333281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 158 - 276
Target Start/End: Complemental strand, 30925130 - 30925012
Alignment:
Q  158 caaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctat 257  Q
    |||||||| |||||| |||||||||||||||||    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||    
T  30925130 caaatagtcactttaatccctgattctgcagctcccagtcacataggtccttgactcaggattaaatacaaataagtctctgactatgcacttccgttat 30925031  T
Q  258 cactttagtccctgacgtt 276  Q
     ||||||||| ||||||||    
T  30925030 tactttagtctctgacgtt 30925012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 35727696 - 35727842
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||||| ||| |||||  ||||||| |||||| || | |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  35727696 tgagcaaacagtcactttgatccctgactctgcacctcgctgtcacataggtccctgactcaggattaaatataaataagtctctgactctgcacatccg 35727795  T
Q  254 ctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
     |||||||||||| |||||||||       ||||||||||||||||||    
T  35727796 ttatcactttagt-cctgacgttaaaaatctctgttaagtgatgatgt 35727842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 301
Target Start/End: Complemental strand, 7259805 - 7259663
Alignment:
Q  159 aaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatc 258  Q
    ||||||| |||||| || |||||| || |||| | |||||||| |||| |||| ||||||||||||||||||||||| |||||||| |||||||| ||||    
T  7259805 aaatagtcactttaatcgctgattttgtagctcgctgtcacatgggtctctgattcaggattaaatacaaataagtccctgactctacacttccgttatc 7259706  T
Q  259 actttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||||||||||||||||       ||||||||||||||||||    
T  7259705 actttagtccctgacgttaaaaaaatctgttaagtgatgatgt 7259663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 276
Target Start/End: Original strand, 48646051 - 48646168
Alignment:
Q  159 aaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatc 258  Q
    ||||||| ||||| |||||||| | |||| || | |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  48646051 aaatagtcactttggtccctgactatgcacctcgctgtcacataggtccctgactcaggattaaatacaaataagtccctgactctacacttccgttatc 48646150  T
Q  259 actttagtccctgacgtt 276  Q
    ||||||||| ||| ||||    
T  48646151 actttagtctctgtcgtt 48646168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 45583682 - 45583792
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||||||||||||||||||| | | | ||||||||||||||||||||| |||||||||| ||||||  |||| ||||||||||||     
T  45583682 gagcaaatagtcactttagtccctgattctgcagttcgctatcacataggtccctgactcagaattaaatacagataagttcctgattctgcacttccgt 45583781  T
Q  255 tatcactttag 265  Q
    |||||||||||    
T  45583782 tatcactttag 45583792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 276
Target Start/End: Complemental strand, 48788797 - 48788676
Alignment:
Q  155 gagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgc 254  Q
    ||||||||||| |||||  ||| ||| | |||| || | ||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||     
T  48788797 gagcaaatagtcactttgatccttgactttgcacctcgctgtcacataggtccctgactcataattaaatataaataagtctctgactctgcacttccgt 48788698  T
Q  255 tatcactttagtccctgacgtt 276  Q
    ||||||||||||| ||||||||    
T  48788697 tatcactttagtctctgacgtt 48788676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 46286504 - 46286610
Alignment:
Q  158 caaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctat 257  Q
    |||||||| |||||||||||||| ||| || || | ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  46286504 caaatagtcactttagtccctgactcttcatctcgctgttagaaaggtccctgactcaggattaaatacaaataagtctctgactctgcacttctgttat 46286603  T
Q  258 cacttta 264  Q
    |||||||    
T  46286604 cacttta 46286610  T

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Target: chr7; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 276
Target Start/End: Original strand, 42477378 - 42477499
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||||||| | | ||| |||| ||| |||||| || | |||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  42477378 tgagcaaataatcaatttggtccttgactctgcacctcgttgtcgcataggtctctgactcaggattaaatacaaataagtc-ctgactctgcacttccg 42477476  T
Q  254 ctatcactttagtccctgacgtt 276  Q
     ||||| |||| |||||||||||    
T  42477477 ttatcattttaatccctgacgtt 42477499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 8374926 - 8375033
Alignment:
Q  169 tttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtcc 268  Q
    |||||||||||| |||||| || | ||||||||||||| ||||||||| |||||||||||| |||| ||||| | |||||||||| |||||||||||||     
T  8374926 tttagtccctgactctgcacctcgctgtcacataggtctctgactcagaattaaatacaaaaaagtttctgattttgcacttccgttatcactttagtct 8375025  T
Q  269 ctgacgtt 276  Q
     |||||||    
T  8375026 ttgacgtt 8375033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 8375669 - 8375595
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtcc 268  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||| ||||||||    
T  8375669 tgtcacataggtccctgactcatgattaaatacaaagaagtttctgactctgcacttccgttatcaatttagtcc 8375595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 12223785 - 12223678
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgttnnnnnnntctgttaagt 293  Q
    |||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||| ||| ||||||||| |||| |||       ||||||||||    
T  12223785 tgtcacataggtccctgactcaggattaaatataaagaagtccctgactctgcagttccgttattactttagtcactgatgttaaataattctgttaagt 12223686  T
Q  294 gatgatgt 301  Q
    ||||||||    
T  12223685 gatgatgt 12223678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 210 - 301
Target Start/End: Complemental strand, 45584566 - 45584475
Alignment:
Q  210 gactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    |||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||||       ||||||||||||||||||    
T  45584566 gactcaggattaaatacaaataagccaatgactctgcacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgt 45584475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 8048913 - 8048800
Alignment:
Q  151 ttatgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcactt 250  Q
    ||||||||||||||| ||||||  | |||| |||||| || | || |||| ||||| |||||||| ||||||||||||| ||||||| ||||||||||||    
T  8048913 ttatgagcaaatagtcactttaccctctgactctgcacctcgctgacacaaaggtctctgactcaagattaaatacaaagaagtctccgactctgcactt 8048814  T
Q  251 ccgctatcacttta 264  Q
    ||| ||||||||||    
T  8048813 ccgttatcacttta 8048800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 276
Target Start/End: Original strand, 44529021 - 44529147
Alignment:
Q  144 tataaagttatgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactc 243  Q
    |||||||  |||| ||||||||  |||||||||||||||||| |||       ||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  44529021 tataaagaaatgaacaaatagtctctttagtccctgattctgtagca------cacatagatccctgactcatgattaaatacaaataagtctccgactc 44529114  T
Q  244 tgcacttccgctatcactttagtccctgacgtt 276  Q
      |||||| | ||||||||||||||||||||||    
T  44529115 aacacttctgttatcactttagtccctgacgtt 44529147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 204 - 267
Target Start/End: Complemental strand, 44530687 - 44530624
Alignment:
Q  204 gtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtc 267  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  44530687 gtccccgactcaggattaaatataaataagtctctgactctgcacttccgttatcactttagtc 44530624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 13578392 - 13578332
Alignment:
Q  208 ctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtcc 268  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  13578392 ctgactcagaattaaatacaaataagtcactgactctgcacttccgttatcactttagtcc 13578332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 276
Target Start/End: Complemental strand, 33607701 - 33607627
Alignment:
Q  202 aggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||| |||| ||||||||||||||||| |||||||||| |||||||||||| ||||| ||||| ||||||||||    
T  33607701 aggtctctgattcaggattaaatacaaagaagtctctgattctgcacttccgttatcattttagaccctgacgtt 33607627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 4958192 - 4958272
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagtt 152  Q
    |||||||||||||| |||| |||||||| |||| ||||||  |||||||||||||||| ||| ||||||||||||||||||    
T  4958192 ggtctcacttaagaccctccatcttaagtgggatccacacctttttaatattaaaaaattgatatgtaatgatataaagtt 4958272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 36656771 - 36656696
Alignment:
Q  80 cttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||| | ||||| |||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||    
T  36656771 cttaagatcttcaattttaagcgggacccacacctttttaatattaaaaaattgatatgtaatgatataaagttat 36656696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 39708100 - 39708214
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||| ||||| ||||||||| |||| |||| | || |  |||||| |||||| ||||||| |||| |||||||| ||||| | |||| ||||||||||    
T  39708100 tgagcatatagtcactttagtctctgactctgtacctcgccgtcacaaaggtccatgactcaagattgaatacaaagaagtcaccgactttgcacttccg 39708199  T
Q  254 ctatcactttagtcc 268  Q
     ||||||||||||||    
T  39708200 ttatcactttagtcc 39708214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 12220060 - 12220133
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtc 267  Q
    ||||||| || | ||||||||| ||||||||| ||| ||||||||||||||||||||| | |||||||||||||    
T  12220060 tgtcacaaagattcctgactcaagattaaatagaaagaagtctctgactctgcacttctgatatcactttagtc 12220133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 38223930 - 38224011
Alignment:
Q  74 gtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||||||||||||  |||||||||||| |||||||||||  |||||||||||||||| | | |||||||||||||| |||||    
T  38223930 gtctcacttaagactctcaatcttaagtgggacccacacctttttaatattaaaaaatttatatgtaatgatataatgttat 38224011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 46748200 - 46748115
Alignment:
Q  70 cgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaa-aaatgaaatgtaatgatataaagttat 154  Q
    |||||||| | |||||| || || | ||||||||||||||||| |||||||||||||| || ||| ||||||||||||||||||||    
T  46748200 cgaggtcttagttaagacccccacttttaagcgggacccacactcttttaatattaaataattgatatgtaatgatataaagttat 46748115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 154
Target Start/End: Complemental strand, 5514014 - 5513935
Alignment:
Q  75 tctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||||||||||| || |||||||||||| ||| ||||| |||||||||| |||||| ||||||||||| ||||||||||||    
T  5514014 tctcacttaagaccc-caatcttaagcgagacacacactcttttaatataaaaaaattgaaatgtaattatataaagttat 5513935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 19987103 - 19987195
Alignment:
Q  63 taagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||| || ||||||||||||||| ||||||||||||| | ||||||||   |||||||||||||||| ||  |||||||||| |||||||||    
T  19987103 taagacccaaggtctcacttaagaccctcaatcttaagtgagacccacaactttttaatattaaaaaattgttatgtaatgatttaaagttat 19987195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 32724199 - 32724267
Alignment:
Q  87 acctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||||| ||||||| |||||||||||  |||||||||||||||| ||| ||||||||||||||||||||    
T  32724199 acctcattcttaagtgggacccacacctttttaatattaaaaaattgatatgtaatgatataaagttat 32724267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 10894391 - 10894446
Alignment:
Q  198 acataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||||||||||||||| ||||||||| |||||||||||| | ||||||||||||    
T  10894391 acataggtccctgactcaagattaaatataaataagtctctaattctgcacttccg 10894446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 23802302 - 23802224
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagt 151  Q
    ||||| |||||||| |||||||||||||| |||  ||||| |||| |||||||||||| |||||||||||||||||||||    
T  23802302 ggtcttacttaaga-cctcaatcttaagcaggattcacactctttcaatattaaaaaattgaaatgtaatgatataaagt 23802224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 34704911 - 34704994
Alignment:
Q  159 aaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgact 242  Q
    ||||||| ||||||||| | || |||||| || | ||||||| ||| | |||||||||||||||||||||| ||||||||||||    
T  34704911 aaatagtcactttagtctccgactctgcacctcgttgtcacaaaggcctctgactcaggattaaatacaaagaagtctctgact 34704994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 43302265 - 43302206
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||||||||| |||||| ||||||||||||||||| |||||| |||||||||||||||||    
T  43302265 ttaagcgggatccacactcttttaatattaaaaaattgaaatataatgatataaagttat 43302206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 19594003 - 19594085
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||| ||||||||  |||||||||||| | |||||||||  |||||| ||||||||| |||||| |||||||||||||||||    
T  19594003 ggtctaacttaagactctcaatcttaagtgagacccacacctttttaagattaaaaaattgaaatataatgatataaagttat 19594085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 19753131 - 19753049
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||| ||||||||  |||||||||||| | |||||||||  |||||| ||||||||| ||||||||||||||||||| ||||    
T  19753131 ggtctaacttaagactctcaatcttaagtgagacccacacctttttaagattaaaaaattgaaatgtaatgatataaaattat 19753049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 48767327 - 48767245
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||||||| ||||| ||||||||||||| |||||  ||||  |||||||| ||||||| ||||||| ||||||||||||||||    
T  48767327 ggtctcacataagaccctcaatcttaagtgggactaacacttttttaataataaaaaattgaaatgcaatgatataaagttat 48767245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 30859511 - 30859595
Alignment:
Q  54 gggtcttattaagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaatgaaatgta 139  Q
    ||||||||| |||||||| ||||| |||||||| | ||||||||||| ||| |  ||||| ||||||||||||||| |||||||||    
T  30859511 gggtcttat-aagatccggggtcttacttaagaccttcaatcttaagtggggcttacacatttttaatattaaaaattgaaatgta 30859595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 301
Target Start/End: Complemental strand, 5930216 - 5930112
Alignment:
Q  196 tcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgttnnnnnnntctgttaagtga 295  Q
    ||||| |||||||| ||||||||||||||||||  || | || |||| |||||||||| ||||||||||||||||| | ||       ||||||||||||    
T  5930216 tcacaaaggtccctaactcaggattaaatacaagaaattttc-gactgtgcacttccgttatcactttagtccctgccattaaataattctgttaagtga 5930118  T
Q  296 tgatgt 301  Q
    ||||||    
T  5930117 tgatgt 5930112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 48615424 - 48615376
Alignment:
Q  106 cccacacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  48615424 cccacacatatttgatattaaaaaatgaaatgtaatgatataaagttat 48615376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 2888112 - 2888179
Alignment:
Q  87 acctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagtta 153  Q
    |||||||||||||| ||||  ||| || |||||||||||||||| |||||| ||||||||||||||||    
T  2888112 acctcaatcttaagtgggattcacgcatttttaatattaaaaaattgaaatataatgatataaagtta 2888179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 276
Target Start/End: Complemental strand, 34889009 - 34888927
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||| ||||| || ||||| ||||||||| ||| | |||  | |||||||||||||| |||||||||||||| |||||||    
T  34889009 tgtcacaaaggtctctcactcatgattaaatataaagatgtccttaactctgcacttccgttatcactttagtccttgacgtt 34888927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 43461789 - 43461732
Alignment:
Q  218 attaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||||||||||||| | ||||| |||||||||| ||||||||||||| ||||||||    
T  43461789 attaaatacaaataagttt-tgactatgcacttccgttatcactttagtctctgacgtt 43461732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 276
Target Start/End: Complemental strand, 8879616 - 8879547
Alignment:
Q  207 cctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    |||||||||||||||||||||||  |||  |||| | |||| ||| | ||||||||||||||||||||||    
T  8879616 cctgactcaggattaaatacaaagtagttcctgaatgtgcatttctgttatcactttagtccctgacgtt 8879547  T

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Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 37698469 - 37698522
Alignment:
Q  100 gcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagtt 152  Q
    ||||||||||||| ||||||||||||||||| | ||||||| ||||||||||||    
T  37698469 gcgggacccacactcttttaatattaaaaaattaaaatgtagtgatataaagtt 37698522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 2008549 - 2008625
Alignment:
Q  79 acttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    |||||||| | ||||||||||| ||||| || ||  |||||||||||||||| |||||||||||| |||||| ||||    
T  2008549 acttaagaccttcaatcttaagtgggacacatacttttttaatattaaaaaattgaaatgtaatggtataaaattat 2008625  T

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Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 301
Target Start/End: Complemental strand, 19434058 - 19433913
Alignment:
Q  156 agcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgct 255  Q
    ||||||| || |||||||||||| | ||| || || | ||||||| ||||| |||| | ||||||||||| ||  ||||| | ||||| ||||||| | |    
T  19434058 agcaaattgtcactttagtccctaactctccatctcgttgtcacaaaggtctctgatttaggattaaatataaggaagtcaccgactccgcacttcagtt 19433959  T
Q  256 atcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||||||||||  || ||||       ||||||||||||||||||    
T  19433958 atcactttagtctatggcgttaaataattctgttaagtgatgatgt 19433913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 25621788 - 25621725
Alignment:
Q  213 tcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    |||||||||||||||||| ||| | ||| | |||||||| | ||||||||||||| ||||||||    
T  25621788 tcaggattaaatacaaattagtttttgaatgtgcacttctgttatcactttagtcactgacgtt 25621725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 276
Target Start/End: Complemental strand, 7509557 - 7509475
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||| |||||  ||| ||| ||||||||| ||| ||||||| || |||||||||||| ||| ||||||  ||||||||||    
T  7509557 tgtcacaaaggtctttgattcatgattaaatataaagaagtctcagattctgcacttccgttattactttaacccctgacgtt 7509475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 36482176 - 36482094
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||| |||||||| || || | ||||||||||  | ||| ||||||||||||||||| |||||| |||| ||||||||||||    
T  36482176 ggtcttacttaagacccccacttttaagcgggaatcgcactcttttaatattaaaaaattgaaatataattatataaagttat 36482094  T

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Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 21062814 - 21062887
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaataca 227  Q
    |||| |||| || |||||||||||||| | |||| || | ||||| | |||||| |||||||||||||||||||    
T  21062814 tgagaaaatggtcactttagtccctgactttgcacctcgctgtcataaaggtccttgactcaggattaaataca 21062887  T

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Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 23156401 - 23156328
Alignment:
Q  82 taagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||| || |||| ||| ||||||||  ||| ||||||||||||||||| | ||||||| ||||||||||||||    
T  23156401 taagacccccaattttatgcgggacctgcactcttttaatattaaaaaattaaaatgtagtgatataaagttat 23156328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 32793216 - 32793281
Alignment:
Q  202 aggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtc 267  Q
    ||||| || ||| |||||||||||||||||||||  ||| |||||| ||| | |||||||||||||    
T  32793216 aggtctctaacttaggattaaatacaaataagtcattgattctgcatttcggttatcactttagtc 32793281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 36039051 - 36039091
Alignment:
Q  115 ttttaatattaaaa-aatgaaatgtaatgatataaagttat 154  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  36039051 ttttaatattaaaaaaatgaaatataatgatataaagttat 36039091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 272
Target Start/End: Original strand, 116054 - 116170
Alignment:
Q  156 agcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgct 255  Q
    |||||||||| |||||||| ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |    
T  116054 agcaaatagtcactttagttcctcattctgcagctcgctgtcacataggtccctgactcaggattaaatacaaataagtccctgactatgcacttccgtt 116153  T
Q  256 atcactttagtccctga 272  Q
    |||||||||||||||||    
T  116154 atcactttagtccctga 116170  T

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Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 153 - 276
Target Start/End: Original strand, 30747995 - 30748118
Alignment:
Q  153 atgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttcc 252  Q
    ||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||| |    
T  30747995 atgagcaaatagtcactttagtccctgattctgcacctcgctgtcacataggtccctgacttaggattaaatacaaacaagtctctgactctacactttc 30748094  T
Q  253 gctatcactttagtccctgacgtt 276  Q
    | ||||||||||||| ||| ||||    
T  30748095 gttatcactttagtcgctgccgtt 30748118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 31218952 - 31219070
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    ||||||||| || |||||| || |||| |||||| || | |||||||||||||| | ||||||||||||||||||| ||||  |||||||||||||||||    
T  31218952 tgagcaaatggtcactttaatctctgactctgcacctcgctgtcacataggtccttaactcaggattaaatacaaagaagttcctgactctgcacttccg 31219051  T
Q  254 ctatcactttagtccctga 272  Q
     |||||||||| |||||||    
T  31219052 ttatcactttaatccctga 31219070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 276
Target Start/End: Complemental strand, 31219273 - 31219164
Alignment:
Q  167 actttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagt 266  Q
    |||||| ||||||| |||||| || | |||||||||||||  | ||||||||||||||||||| ||||  |||||||  |||||||| ||||||||||||    
T  31219273 actttaatccctgactctgcacctcgctgtcacataggtcattaactcaggattaaatacaaagaagttcctgactcgacacttccgttatcactttagt 31219174  T
Q  267 ccctgacgtt 276  Q
    | ||||||||    
T  31219173 ctctgacgtt 31219164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 7694103 - 7694011
Alignment:
Q  63 taagatccgaggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||  |||||||||||||| | ||||||||||| |||||| ||||  |||||||||||||||| ||||||||| |||||| |||||||    
T  7694103 taagatccagggtctcacttaagaccttcaatcttaagagggacctacacttttttaatattaaaaaattgaaatgtattgatatgaagttat 7694011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 23507985 - 23508067
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    |||||||||||| ||||| ||||||||||||||||| || ||| ||||| | |||||||  ||||||||||||||||| ||||    
T  23507985 tgtcacataggttcctgattcaggattaaatacaaacaaatctatgactttacacttcctttatcactttagtccctgtcgtt 23508067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 9491906 - 9491843
Alignment:
Q  92 aatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||| ||||||||||   |||||||||||||||| | ||||||||||||||||||||||    
T  9491906 aatcttaagtgggacccacatttttttaatattaaaaaattaaaatgtaatgatataaagttat 9491843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 32658572 - 32658513
Alignment:
Q  96 ttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||||||||||||||| ||||||||||||||||| | |||| || ||||||||||||||    
T  32658572 ttaagcgggacccacactcttttaatattaaaaaattaaaatatactgatataaagttat 32658513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 6468867 - 6468811
Alignment:
Q  194 tgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcactt 250  Q
    ||||||| |||||||||||||| |||||||||||||  ||||||||| | |||||||    
T  6468867 tgtcacaaaggtccctgactcatgattaaatacaaaatagtctctgaatgtgcactt 6468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 22281937 - 22281855
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaat-gaaatgtaatgatataaagttat 154  Q
    ||||| |||||||| || || | ||||| || |||| ||| |||||||| ||||||||| ||||| |||||||||||||||||    
T  22281937 ggtcttacttaagacccccacttttaagtggcacccgcactcttttaatgttaaaaaattgaaatataatgatataaagttat 22281855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 5002515 - 5002458
Alignment:
Q  98 aagcgggacccacacacttttaata-ttaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||||||| ||| ||||||||| ||||||| |||||| |||| ||||||||||||    
T  5002515 aagcgggacccgcactcttttaatatttaaaaattgaaatataataatataaagttat 5002458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 6988147 - 6988212
Alignment:
Q  90 tcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||| ||| ||||||| ||||| ||||||||||||||||| | |||||| |||||||||| ||||    
T  6988147 tcaattttaggcgggacacacactcttttaatattaaaaaattaaaatgtgatgatataaaattat 6988212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 301
Target Start/End: Complemental strand, 31240036 - 31239966
Alignment:
Q  231 aagtctctgactctgcacttccgctatcactttagtccctgacgttnnnnnnntctgttaagtgatgatgt 301  Q
    ||||||||||||||||| ||||| ||||| ||| ||||| ||||||       ||||||||||||||||||    
T  31240036 aagtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgt 31239966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 276
Target Start/End: Original strand, 79073 - 79192
Alignment:
Q  157 gcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgcta 256  Q
    ||||||||| | |||||| ||||| |||||| || | |||||||||||||| ||||||| ||||||||| ||| |||||  ||||| ||||| |||| ||    
T  79073 gcaaatagtcaatttagttcctgactctgcacctcgctgtcacataggtccttgactcatgattaaataaaaagaagtccttgactttgcacctccgata 79172  T
Q  257 tcactttagtccctgacgtt 276  Q
    |||||||||||  |||||||    
T  79173 tcactttagtctttgacgtt 79192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 276
Target Start/End: Complemental strand, 79809 - 79687
Alignment:
Q  154 tgagcaaatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccg 253  Q
    |||||||||||| |||||| ||||||| || ||| || | ||| ||||| || ||||||||| ||||||||||||| |||||| |||||||||| |||      
T  79809 tgagcaaatagtcactttaatccctgactcggcacctcgttgttacataagttcctgactcatgattaaatacaaagaagtctttgactctgcatttcta 79710  T
Q  254 ctatcactttagtccctgacgtt 276  Q
     ||||| |||||||  |||||||    
T  79709 ttatcattttagtctttgacgtt 79687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 74433 - 74331
Alignment:
Q  160 aatagtaactttagtccctgattctgcagcttggtgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcacttccgctatca 259  Q
    |||||| | |||||||||||| |||||| ||   |||||||||||||||| ||||| ||||||||||||| |||||  ||||||| ||| || | |||||    
T  74433 aatagtcagtttagtccctgactctgcaactcactgtcacataggtccctaactcatgattaaatacaaagaagtccttgactctacacctctgatatca 74334  T
Q  260 ctt 262  Q
    |||    
T  74333 ctt 74331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 5650 - 5718
Alignment:
Q  208 ctgactcaggattaaatacaaataagtctctgactctgcacttccgctatcactttagtccctgacgtt 276  Q
    ||||||||| |||||||||||| ||||| |||||||| |||||||| ||||||||||||| ||| ||||    
T  5650 ctgactcagaattaaatacaaagaagtccctgactctacacttccgttatcactttagtctctggcgtt 5718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 55944 - 55886
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaat 131  Q
    |||||||||||||| ||||| ||||||| || || ||||| ||||||||||||||||||    
T  55944 ggtctcacttaagaccctcattcttaagtggaactcacactcttttaatattaaaaaat 55886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 3052 - 2971
Alignment:
Q  73 ggtctcacttaagaacctcaatcttaagcgggacccacacacttttaatattaaaaaa-tgaaatgtaatgatataaagttat 154  Q
    ||||| |||||||| ||||||||||||||||||| || |   |||| ||||||||||| |||||| |||||||||||| ||||    
T  3052 ggtcttacttaagaccctcaatcttaagcgggactcata-tttttttatattaaaaaattgaaatataatgatataaaattat 2971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 2204 - 2160
Alignment:
Q  110 cacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    |||||||||||||||||||| ||||||  | ||||||||||||||    
T  2204 cacacttttaatattaaaaattgaaattcagtgatataaagttat 2160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 31938 - 31890
Alignment:
Q  106 cccacacacttttaatattaaaaaatgaaatgtaatgatataaagttat 154  Q
    ||||||| |||||||||||||||| | |||| |||| ||||||||||||    
T  31938 cccacactcttttaatattaaaaatttaaatataatcatataaagttat 31890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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