View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18339_low_52 (Length: 263)
Name: NF18339_low_52
Description: NF18339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18339_low_52 |
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Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 8950455 - 8950690
Alignment:
| Q |
10 |
agaagaataataattgtatggattatatggttaatttggttatttagttctgcttaagagaaaagnnnnnnngtgttacatcattcaacaagatacacaa |
109 |
Q |
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| T |
8950455 |
agaataataataattgtatggattatatggttaatttggttatttagttctgcttaagagaaaagaaaaaaagtgttacatcattcaacgagatacacaa |
8950554 |
T |
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| Q |
110 |
ctctaactgaaatagaaatcataacttattctcttgttgagcaaaataaatttgtttctattatgcagagaaccatgaagctcatcttgctttggggact |
209 |
Q |
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| T |
8950555 |
ctctaactgaaatagaaatcataacttattctcttgttgagcaaaataaatttgtttctattatgcagagaaccatgaagctcatcttgctttggggact |
8950654 |
T |
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| Q |
210 |
tccctgtttcatatgtcaatgtgtctacaagatatg |
245 |
Q |
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| T |
8950655 |
tccctgtttcatatgtcaatgtgtctacaagatatg |
8950690 |
T |
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