View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1833_low_17 (Length: 233)

Name: NF1833_low_17
Description: NF1833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1833_low_17
NF1833_low_17
[»] chr7 (48 HSPs)
chr7 (25-109)||(42880153-42880237)
chr7 (175-222)||(24680132-24680179)
chr7 (175-222)||(27947601-27947648)
chr7 (177-222)||(29531035-29531080)
chr7 (127-222)||(22297952-22298047)
chr7 (175-219)||(27935771-27935815)
chr7 (175-222)||(19105101-19105148)
chr7 (175-222)||(40753528-40753575)
chr7 (175-222)||(42285912-42285959)
chr7 (176-222)||(2297043-2297089)
chr7 (176-222)||(10599218-10599264)
chr7 (176-222)||(37490789-37490835)
chr7 (176-222)||(42880034-42880080)
chr7 (176-222)||(45948730-45948776)
chr7 (175-221)||(48843556-48843602)
chr7 (176-220)||(18270582-18270626)
chr7 (176-220)||(21752213-21752257)
chr7 (175-222)||(10476140-10476187)
chr7 (175-222)||(13405227-13405274)
chr7 (175-222)||(23935426-23935473)
chr7 (175-222)||(31929960-31930007)
chr7 (176-219)||(40927168-40927211)
chr7 (175-222)||(44567141-44567188)
chr7 (176-222)||(715963-716009)
chr7 (176-222)||(1741996-1742042)
chr7 (176-222)||(12977786-12977832)
chr7 (126-219)||(34012116-34012209)
chr7 (176-222)||(34274799-34274845)
chr7 (176-222)||(37502324-37502370)
chr7 (176-222)||(48684728-48684774)
chr7 (127-222)||(8603928-8604026)
chr7 (176-220)||(18292340-18292384)
chr7 (126-162)||(37815930-37815966)
chr7 (177-217)||(44453141-44453181)
chr7 (175-211)||(45933695-45933731)
chr7 (183-222)||(25440884-25440923)
chr7 (175-222)||(30312462-30312509)
chr7 (175-222)||(36807939-36807986)
chr7 (127-217)||(40339413-40339505)
chr7 (176-218)||(6747232-6747274)
chr7 (176-222)||(28289220-28289266)
chr7 (175-221)||(39557326-39557372)
chr7 (126-159)||(10599167-10599200)
chr7 (175-216)||(32501855-32501896)
chr7 (190-222)||(31418613-31418645)
chr7 (126-162)||(36915575-36915611)
chr7 (126-162)||(44453339-44453375)
chr7 (126-162)||(45933498-45933534)
[»] chr8 (36 HSPs)
chr8 (176-228)||(39765955-39766007)
chr8 (175-222)||(17920960-17921007)
chr8 (175-222)||(40362439-40362486)
chr8 (175-222)||(43084729-43084776)
chr8 (176-222)||(6374419-6374465)
chr8 (176-222)||(40228579-40228625)
chr8 (175-222)||(31693723-31693770)
chr8 (176-222)||(15160548-15160594)
chr8 (176-222)||(35356312-35356358)
chr8 (176-222)||(39463264-39463310)
chr8 (126-222)||(39698768-39698865)
chr8 (175-222)||(514878-514925)
chr8 (175-222)||(6116107-6116154)
chr8 (175-214)||(29312303-29312342)
chr8 (176-222)||(4989483-4989529)
chr8 (176-222)||(43974893-43974939)
chr8 (176-222)||(45358996-45359042)
chr8 (175-222)||(396315-396363)
chr8 (175-219)||(9812177-9812221)
chr8 (175-223)||(43561343-43561390)
chr8 (127-162)||(9022601-9022636)
chr8 (175-218)||(12339715-12339758)
chr8 (191-222)||(17655927-17655958)
chr8 (175-222)||(36921361-36921408)
chr8 (175-222)||(37559635-37559682)
chr8 (176-219)||(43448721-43448764)
chr8 (176-222)||(7839463-7839509)
chr8 (176-222)||(13496240-13496286)
chr8 (176-222)||(29025848-29025894)
chr8 (127-160)||(9880666-9880699)
chr8 (189-222)||(41679337-41679370)
chr8 (127-160)||(44713488-44713521)
chr8 (127-159)||(36915573-36915605)
chr8 (126-162)||(39463212-39463248)
chr8 (176-224)||(43724386-43724434)
chr8 (175-219)||(44713538-44713582)
[»] scaffold0565 (2 HSPs)
scaffold0565 (175-222)||(9743-9790)
scaffold0565 (126-162)||(9571-9607)
[»] chr3 (46 HSPs)
chr3 (175-222)||(50038270-50038317)
chr3 (176-222)||(3152905-3152951)
chr3 (176-222)||(30426423-30426469)
chr3 (176-222)||(48901725-48901771)
chr3 (176-222)||(48903291-48903337)
chr3 (175-219)||(47137967-47138011)
chr3 (175-222)||(9189534-9189581)
chr3 (175-222)||(11393549-11393596)
chr3 (175-222)||(53200779-53200826)
chr3 (176-222)||(30431125-30431171)
chr3 (176-222)||(32492280-32492326)
chr3 (176-222)||(36460811-36460857)
chr3 (176-222)||(38016380-38016426)
chr3 (127-222)||(45213821-45213916)
chr3 (175-222)||(39356889-39356936)
chr3 (175-222)||(42071989-42072036)
chr3 (176-222)||(2458012-2458058)
chr3 (176-222)||(19115392-19115438)
chr3 (176-222)||(36729909-36729955)
chr3 (176-222)||(42571628-42571674)
chr3 (176-222)||(44676226-44676272)
chr3 (176-222)||(47895443-47895489)
chr3 (176-222)||(50646209-50646255)
chr3 (175-220)||(8817144-8817189)
chr3 (177-222)||(52654310-52654355)
chr3 (175-219)||(33194133-33194177)
chr3 (182-222)||(36844841-36844881)
chr3 (175-222)||(4758995-4759042)
chr3 (175-222)||(11019925-11019972)
chr3 (175-222)||(22857094-22857141)
chr3 (127-162)||(31290886-31290921)
chr3 (175-222)||(33024399-33024446)
chr3 (176-219)||(38140955-38140998)
chr3 (176-219)||(38363790-38363833)
chr3 (175-222)||(41850394-41850441)
chr3 (175-222)||(47823550-47823597)
chr3 (176-222)||(4392201-4392247)
chr3 (176-222)||(30315314-30315360)
chr3 (127-161)||(37225759-37225793)
chr3 (126-160)||(42886946-42886980)
chr3 (175-217)||(51324143-51324185)
chr3 (176-222)||(51398015-51398061)
chr3 (126-162)||(20512659-20512695)
chr3 (126-162)||(44854519-44854555)
chr3 (126-162)||(51397963-51397999)
chr3 (126-162)||(54261369-54261405)
[»] chr1 (57 HSPs)
chr1 (175-222)||(25487092-25487139)
chr1 (175-222)||(9915447-9915494)
chr1 (176-219)||(15573612-15573655)
chr1 (175-222)||(15823038-15823085)
chr1 (176-222)||(10842785-10842831)
chr1 (176-222)||(26352181-26352227)
chr1 (176-222)||(29567901-29567947)
chr1 (176-222)||(32807038-32807084)
chr1 (176-222)||(38531397-38531443)
chr1 (176-222)||(40717396-40717442)
chr1 (176-222)||(50094234-50094280)
chr1 (176-222)||(50249315-50249361)
chr1 (127-219)||(46554754-46554846)
chr1 (175-219)||(14373516-14373560)
chr1 (175-222)||(12591182-12591229)
chr1 (175-222)||(13408365-13408412)
chr1 (175-222)||(26595169-26595216)
chr1 (175-222)||(33622465-33622512)
chr1 (175-222)||(44258607-44258654)
chr1 (176-219)||(46045978-46046021)
chr1 (175-222)||(46286918-46286965)
chr1 (175-222)||(48009014-48009061)
chr1 (176-222)||(5463580-5463626)
chr1 (127-161)||(18794705-18794739)
chr1 (176-222)||(27720963-27721009)
chr1 (176-222)||(34032180-34032226)
chr1 (176-222)||(34047335-34047381)
chr1 (180-222)||(35848033-35848075)
chr1 (176-222)||(39125653-39125699)
chr1 (176-222)||(52024334-52024380)
chr1 (177-222)||(14593420-14593465)
chr1 (177-226)||(52125232-52125281)
chr1 (175-219)||(1740744-1740788)
chr1 (126-220)||(48025356-48025452)
chr1 (127-162)||(13408246-13408281)
chr1 (179-222)||(34110535-34110578)
chr1 (175-222)||(44108603-44108650)
chr1 (175-222)||(44557144-44557191)
chr1 (176-219)||(46271420-46271463)
chr1 (127-161)||(12002200-12002234)
chr1 (176-222)||(16757294-16757340)
chr1 (176-222)||(24483393-24483439)
chr1 (127-161)||(24884366-24884400)
chr1 (176-222)||(26755225-26755271)
chr1 (177-219)||(27208995-27209037)
chr1 (126-160)||(28200390-28200424)
chr1 (175-217)||(30292944-30292986)
chr1 (176-222)||(31491870-31491916)
chr1 (176-222)||(49402971-49403017)
chr1 (176-222)||(49468811-49468857)
chr1 (177-222)||(25151821-25151866)
chr1 (128-161)||(43358364-43358397)
chr1 (126-159)||(45377070-45377103)
chr1 (126-162)||(2458961-2458997)
chr1 (126-162)||(7375242-7375278)
chr1 (175-219)||(24884419-24884463)
chr1 (126-162)||(32807100-32807136)
[»] scaffold0332 (1 HSPs)
scaffold0332 (176-222)||(3912-3958)
[»] scaffold0182 (1 HSPs)
scaffold0182 (176-222)||(18356-18402)
[»] chr6 (25 HSPs)
chr6 (176-222)||(19674985-19675031)
chr6 (126-222)||(24163816-24163913)
chr6 (176-222)||(29713508-29713554)
chr6 (175-218)||(9940652-9940695)
chr6 (176-219)||(13503953-13503996)
chr6 (175-222)||(18737192-18737239)
chr6 (175-222)||(24556030-24556077)
chr6 (176-219)||(31443551-31443594)
chr6 (176-222)||(234039-234085)
chr6 (176-222)||(4850597-4850643)
chr6 (176-218)||(23259431-23259473)
chr6 (176-222)||(29399951-29399997)
chr6 (175-224)||(12588530-12588579)
chr6 (126-222)||(32429239-32429335)
chr6 (177-212)||(17552357-17552392)
chr6 (175-222)||(31233727-31233774)
chr6 (176-222)||(8030647-8030693)
chr6 (177-219)||(12063615-12063657)
chr6 (177-219)||(20226585-20226627)
chr6 (177-219)||(22120569-22120611)
chr6 (126-160)||(23936494-23936528)
chr6 (127-160)||(19600376-19600409)
chr6 (176-212)||(12322996-12323032)
chr6 (126-162)||(17246769-17246805)
chr6 (190-222)||(34513705-34513737)
[»] chr5 (42 HSPs)
chr5 (137-222)||(36164853-36164938)
chr5 (127-222)||(42104165-42104263)
chr5 (175-219)||(43584482-43584526)
chr5 (176-219)||(15167115-15167158)
chr5 (175-222)||(26660759-26660806)
chr5 (175-222)||(26932352-26932399)
chr5 (175-222)||(27797785-27797832)
chr5 (175-222)||(39566187-39566234)
chr5 (176-222)||(6518981-6519027)
chr5 (176-222)||(7317033-7317079)
chr5 (176-222)||(10345034-10345080)
chr5 (176-222)||(14620596-14620642)
chr5 (176-222)||(34446129-34446175)
chr5 (176-222)||(35766002-35766048)
chr5 (176-222)||(39729964-39730010)
chr5 (177-222)||(36073732-36073777)
chr5 (175-222)||(3306111-3306158)
chr5 (175-222)||(4630869-4630916)
chr5 (175-222)||(7579971-7580018)
chr5 (176-222)||(2729888-2729934)
chr5 (176-222)||(3025033-3025079)
chr5 (176-222)||(13761562-13761608)
chr5 (176-222)||(21319412-21319458)
chr5 (176-218)||(38362243-38362285)
chr5 (175-222)||(39504726-39504774)
chr5 (175-214)||(42978176-42978215)
chr5 (176-222)||(9066525-9066571)
chr5 (176-222)||(24280998-24281044)
chr5 (176-222)||(24381168-24381214)
chr5 (127-160)||(15400380-15400413)
chr5 (129-162)||(24436454-24436487)
chr5 (127-160)||(38369827-38369860)
chr5 (176-216)||(8336517-8336557)
chr5 (190-222)||(14005911-14005943)
chr5 (126-162)||(26660960-26660996)
chr5 (126-162)||(26932553-26932589)
chr5 (190-222)||(27600418-27600450)
chr5 (127-159)||(29653680-29653712)
chr5 (126-162)||(34972561-34972597)
chr5 (176-208)||(38990030-38990062)
chr5 (175-219)||(40776681-40776725)
chr5 (175-219)||(42662044-42662088)
[»] chr4 (53 HSPs)
chr4 (176-222)||(2728504-2728550)
chr4 (175-222)||(45043694-45043741)
chr4 (176-222)||(4505342-4505388)
chr4 (176-222)||(10573260-10573306)
chr4 (176-222)||(19451317-19451363)
chr4 (176-222)||(19878653-19878699)
chr4 (176-222)||(20448044-20448090)
chr4 (176-222)||(22220465-22220511)
chr4 (176-222)||(39982108-39982154)
chr4 (176-222)||(52957896-52957942)
chr4 (175-222)||(6991367-6991414)
chr4 (175-222)||(21864489-21864536)
chr4 (175-222)||(21920350-21920397)
chr4 (175-222)||(25231179-25231226)
chr4 (175-222)||(41920415-41920462)
chr4 (176-219)||(49089469-49089512)
chr4 (175-222)||(50623087-50623134)
chr4 (175-222)||(56460087-56460134)
chr4 (176-222)||(1819567-1819613)
chr4 (176-222)||(24940884-24940930)
chr4 (176-222)||(37624561-37624607)
chr4 (176-222)||(40345453-40345499)
chr4 (176-222)||(50621293-50621339)
chr4 (176-222)||(52253850-52253896)
chr4 (176-222)||(52915648-52915694)
chr4 (127-222)||(50203032-50203125)
chr4 (182-222)||(25123832-25123872)
chr4 (176-216)||(27943658-27943698)
chr4 (186-222)||(38510351-38510387)
chr4 (126-162)||(47321349-47321385)
chr4 (175-222)||(29370607-29370654)
chr4 (176-219)||(40837135-40837178)
chr4 (175-222)||(44571971-44572018)
chr4 (176-219)||(49080586-49080628)
chr4 (175-222)||(52848160-52848207)
chr4 (126-160)||(7905922-7905956)
chr4 (176-222)||(7906102-7906148)
chr4 (176-222)||(19930719-19930765)
chr4 (176-222)||(30261264-30261310)
chr4 (176-222)||(41496210-41496256)
chr4 (127-161)||(44572036-44572070)
chr4 (176-222)||(47817743-47817789)
chr4 (176-222)||(51733600-51733646)
chr4 (178-223)||(36558407-36558452)
chr4 (127-160)||(50623292-50623325)
chr4 (127-159)||(30780294-30780326)
chr4 (175-219)||(34316226-34316270)
chr4 (126-162)||(40345262-40345298)
chr4 (176-208)||(47306264-47306296)
chr4 (126-162)||(47817689-47817725)
chr4 (175-219)||(52162110-52162154)
chr4 (126-162)||(54042097-54042133)
chr4 (126-162)||(55126701-55126737)
[»] chr2 (53 HSPs)
chr2 (177-222)||(18719534-18719579)
chr2 (175-222)||(17703023-17703070)
chr2 (175-222)||(25383586-25383633)
chr2 (175-222)||(29808816-29808863)
chr2 (175-222)||(45301769-45301816)
chr2 (176-222)||(441333-441379)
chr2 (176-222)||(9391660-9391706)
chr2 (176-222)||(16463134-16463180)
chr2 (176-222)||(18579172-18579218)
chr2 (176-222)||(43427389-43427435)
chr2 (176-222)||(43971509-43971555)
chr2 (175-216)||(38926610-38926651)
chr2 (175-219)||(28072571-28072615)
chr2 (175-222)||(4469505-4469552)
chr2 (175-222)||(5717517-5717564)
chr2 (175-222)||(6220506-6220553)
chr2 (175-222)||(8540042-8540089)
chr2 (176-219)||(14285943-14285986)
chr2 (175-222)||(14833837-14833884)
chr2 (175-222)||(29411700-29411747)
chr2 (175-222)||(45423622-45423669)
chr2 (176-222)||(4133029-4133075)
chr2 (176-222)||(7028914-7028960)
chr2 (176-222)||(12342098-12342144)
chr2 (176-222)||(16792488-16792534)
chr2 (176-222)||(29396782-29396828)
chr2 (177-222)||(27964472-27964517)
chr2 (176-216)||(11188600-11188640)
chr2 (178-222)||(45082002-45082046)
chr2 (176-219)||(4051809-4051852)
chr2 (175-222)||(7644650-7644697)
chr2 (127-162)||(12342299-12342334)
chr2 (176-219)||(12566085-12566128)
chr2 (175-222)||(32228113-32228160)
chr2 (176-219)||(35799208-35799251)
chr2 (176-219)||(36177981-36178024)
chr2 (175-210)||(37038880-37038915)
chr2 (175-222)||(40608706-40608752)
chr2 (176-222)||(4658335-4658381)
chr2 (176-222)||(7042288-7042334)
chr2 (176-222)||(13561999-13562045)
chr2 (176-222)||(19164362-19164408)
chr2 (176-222)||(22620436-22620482)
chr2 (176-222)||(34546433-34546479)
chr2 (126-160)||(35799423-35799457)
chr2 (182-219)||(42753756-42753793)
chr2 (126-162)||(441142-441178)
chr2 (175-219)||(777774-777818)
chr2 (126-162)||(4132977-4133013)
chr2 (126-158)||(6247674-6247706)
chr2 (175-219)||(27986040-27986083)
chr2 (175-219)||(42004895-42004939)
chr2 (176-222)||(43480971-43481019)
[»] scaffold0110 (1 HSPs)
scaffold0110 (176-222)||(24842-24888)
[»] scaffold2107 (1 HSPs)
scaffold2107 (175-222)||(615-662)
[»] scaffold0294 (1 HSPs)
scaffold0294 (176-222)||(3606-3652)
[»] scaffold0026 (1 HSPs)
scaffold0026 (175-222)||(4144-4192)
[»] scaffold0010 (1 HSPs)
scaffold0010 (176-220)||(153318-153362)
[»] scaffold0502 (1 HSPs)
scaffold0502 (175-222)||(673-720)
[»] scaffold0078 (1 HSPs)
scaffold0078 (176-222)||(1515-1561)
[»] scaffold0048 (1 HSPs)
scaffold0048 (176-222)||(62638-62684)
[»] scaffold0047 (1 HSPs)
scaffold0047 (126-162)||(70618-70654)


Alignment Details
Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 42880237 - 42880153
Alignment:
Q  25 ttaaatttgatatctgatccaatgaacagggacgacaccatgtgtatgtgtatgtgggccgaggcccttgcttccttttcaaaga 109  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  42880237 ttaaatttgatatctgatccaatgaatagggacgacaccatgtgtatgggtatgtgggccgaggcccttggttccttttcaaaga 42880153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 24680132 - 24680179
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  24680132 taaaatgaatgtcattttcagtttccaatgcaataataactttttctt 24680179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 27947648 - 27947601
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  27947648 taaaatgaatgtcactttcagttttcaatgcaataataactttttctt 27947601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 29531080 - 29531035
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  29531080 aaatgaatgtcattttcagttttcaatgcaataataattttttctt 29531035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 22297952 - 22298047
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagccnnnnnnnnnttgtaaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||||||||||| ||||||||||||          ||  ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  22297952 tactccatccgttttaaaatgagtgtcgttttagcaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 22298047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 27935771 - 27935815
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  27935771 taaaatgaatgtcactttcagttttcaatgcaataataacttttt 27935815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 19105148 - 19105101
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||    
T  19105148 taaaatgaatgtcactttcagtttttaatgcaataataactttttctt 19105101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 40753575 - 40753528
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  40753575 taaaatgaatgtcattttcagttttcaatgtaataataattttttctt 40753528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 42285912 - 42285959
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  42285912 taaaatgaatgtcattttcagtttccaatgcaataataattttttctt 42285959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 2297043 - 2297089
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  2297043 aaaatgaatgtcactttcagttttcaatgcaataatatctttttctt 2297089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 10599218 - 10599264
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||    
T  10599218 aaaatgaatatcactttcagttttcaatgcaataataactttttctt 10599264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 37490789 - 37490835
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  37490789 aaaatgaatgtcactttcagttttcaatgcaataataattttttctt 37490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 42880080 - 42880034
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  42880080 aaaatgaatgtcactttcagttttcaatgtaataataactttttctt 42880034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 45948776 - 45948730
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  45948776 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 45948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 48843556 - 48843602
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttct 221  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||    
T  48843556 taaaatgaatgtcactttcagttttcaatgcaataataattttttct 48843602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 18270582 - 18270626
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttc 220  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||    
T  18270582 aaaatgaatgtcactttcagtttccaatgcaataataactttttc 18270626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 21752257 - 21752213
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttc 220  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  21752257 aaaataaatgtcattttcagtttccaatgcaataataactttttc 21752213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 10476140 - 10476187
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  10476140 taaaatgaatgtcactttcactttccaatgcaataataactttttctt 10476187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 13405274 - 13405227
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  13405274 taaaatgaatgtcactttcagtttccaatgtaataataactttttctt 13405227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 23935426 - 23935473
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| |||||| |||||||||| |||||||||||||||||||||||    
T  23935426 taaaataaatgtcgttttcagtttccaatgcaataataactttttctt 23935473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 31930007 - 31929960
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||| | |||||||||||||||||||||||||| ||||||||    
T  31930007 taaaatgaatattattttcagttttcaatgcaataataattttttctt 31929960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 40927168 - 40927211
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  40927168 aaaatgaatgtcactttcagtttccaatgcaataataacttttt 40927211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 44567188 - 44567141
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  44567188 taaaatgaatgtcactttcaattttcaatgcaataataaatttttctt 44567141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 716009 - 715963
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  716009 aaaatgaatgtcactttcagtttccaatgcaataataattttttctt 715963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 1741996 - 1742042
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  1741996 aaaatgaatgtcactttcagtttccaatgcaataataaccttttctt 1742042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 12977832 - 12977786
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  12977832 aaaatgaatgtcactttcaatttccaatgcaataataactttttctt 12977786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 34012116 - 34012209
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagccnnnnnnnnnttgtaaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||| |||||||||||||||| |||||||||||||         || |||||||||||||| ||| ||||| ||||| | ||||||||||||    
T  34012116 atactcactccgttttaaaatgagtgtcgttttagccaaaaaattgttttaaaatgaatgtcactttaagtttccaatgtactaataacttttt 34012209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 34274799 - 34274845
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  34274799 aaaatgaatgtcactttcagtttccaatgcaataataaccttttctt 34274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 37502324 - 37502370
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||| |||| ||||||||| |||||||||||||||||||||||    
T  37502324 aaaatgaacgtcactttcagtttccaatgcaataataactttttctt 37502370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 48684728 - 48684774
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||    
T  48684728 aaaatgaatgtcactttcggtttccaatgcaataataactttttctt 48684774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 8603928 - 8604026
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagccnnnnnnnnnttgt---aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||| |||||||||||||||| |||||||||||||         ||||   |||||||| |||| ||||| ||| |||||||||||||||||||||||    
T  8603928 tactctctccgttttaaaatgagtgtcgttttagccataaaaatattgttttaaaatgaacgtcactttcaatttccaatgcaataataactttttctt 8604026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 18292340 - 18292384
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttc 220  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||    
T  18292340 aaaatgaatgtcactttcaatttccaatgcaataataactttttc 18292384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 37815966 - 37815930
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||||||||||| |||||||||||||    
T  37815966 atactccctccgttttaaaatgagtgtcgttttagcc 37815930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 44453141 - 44453181
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataataacttt 217  Q
    |||||||||||| ||||||||| ||||||||||||||||||    
T  44453141 aaatgaatgtcactttcagtttccaatgcaataataacttt 44453181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 45933731 - 45933695
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataat 211  Q
    |||||||||||||| ||||||||||||||||||||||    
T  45933731 taaaatgaatgtcactttcagttttcaatgcaataat 45933695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 25440884 - 25440923
Alignment:
Q  183 atgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  25440884 atgtcactttcagtttccaatgcaataataactttttctt 25440923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 30312462 - 30312509
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| |||| ||||||||| ||||||||| ||||||||    
T  30312462 taaaatgaatgtcactttcggttttcaatacaataataattttttctt 30312509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 36807939 - 36807986
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||||||||  |||||||| ||||||||||||||||||    
T  36807939 taaaataaatgtcattttcgcttttcaatacaataataactttttctt 36807986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 40339413 - 40339505
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagccnnnnnnnnnttgt---aaaatgaatgtcattttcagttttcaatgcaataataacttt 217  Q
    |||||||||||||||||||||| |||||||||||||         ||||   ||||||| ||||| ||||| ||||||||||||||||||||||    
T  40339413 tactccctccgttttaaaatgagtgtcgttttagccaaaaagaa-ttgtttcaaaatgactgtcactttcaattttcaatgcaataataacttt 40339505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 6747232 - 6747274
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttt 218  Q
    |||| |||||||| ||||||||| |||||||||||||||||||    
T  6747232 aaaacgaatgtcactttcagtttccaatgcaataataactttt 6747274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 28289220 - 28289266
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||| ||||||| ||| ||||||||||||||||||||| |||||||    
T  28289220 aaaataaatgtcactttgagttttcaatgcaataataacattttctt 28289266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 39557326 - 39557372
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttct 221  Q
    |||||| ||||||| ||||||||||||||| |||||||| |||||||    
T  39557326 taaaataaatgtcactttcagttttcaatgtaataataattttttct 39557372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 10599167 - 10599200
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgtttta 159  Q
    ||||||||||||||||||||||| ||||||||||    
T  10599167 atactccctccgttttaaaatgagtgtcgtttta 10599200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 32501896 - 32501855
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactt 216  Q
    |||||| ||| ||| |||||||||||||||||||||||||||    
T  32501896 taaaataaatatcactttcagttttcaatgcaataataactt 32501855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 31418645 - 31418613
Alignment:
Q  190 tttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||| |||||||||||||||||||||||    
T  31418645 tttcagtttccaatgcaataataactttttctt 31418613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 36915611 - 36915575
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    |||||| |||||||||||||||| |||||||||||||    
T  36915611 atactctctccgttttaaaatgagtgtcgttttagcc 36915575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 44453375 - 44453339
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  44453375 atactccttccgttttaaaatgagtgtcgttttagcc 44453339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 45933498 - 45933534
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  45933498 atactccctccgttttaaaatgagtgtcgctttagcc 45933534  T

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Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 39766007 - 39765955
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttcttctcact 228  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  39766007 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcact 39765955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 17920960 - 17921007
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  17920960 taaaatgaatgtcactttcagttttcaatgcaataataactttttctt 17921007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 40362439 - 40362486
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  40362439 taaaatgaatgtcactttcagttttcaatgcaataataactttttctt 40362486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 43084776 - 43084729
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  43084776 taaaatgaatgtcactttcagttttcaatgcaataataactttttctt 43084729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 6374419 - 6374465
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  6374419 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 6374465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 40228579 - 40228625
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  40228579 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 40228625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 31693770 - 31693723
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  31693770 taaaatgaatatcactttcagttttcaatgcaataataactttttctt 31693723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 15160594 - 15160548
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  15160594 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 15160548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 35356312 - 35356358
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  35356312 aaaatgaatatcattttcagtttccaatgcaataataactttttctt 35356358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 39463264 - 39463310
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  39463264 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39463310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 39698865 - 39698768
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc-nnnnnnnnnttgtaaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||| ||||||| |||||||||||||          ||  ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  39698865 atactccctccgtttcaaaatgagtgtcgttttagccaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39698768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 514878 - 514925
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  514878 taaaatgaatgtcactttcaattttcaatgcaataataattttttctt 514925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 6116154 - 6116107
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  6116154 taaaatgaatatcactttcggttttcaatgcaataataactttttctt 6116107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 29312342 - 29312303
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataac 214  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  29312342 taaaatgaatgtcattttcagtttccaatgcaataataac 29312303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 4989483 - 4989529
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  4989483 aaaatgaatatcactttcagtttccaatgcaataataactttttctt 4989529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 43974939 - 43974893
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  43974939 aaaatgaatgtcacttttagtttccaatgcaataataactttttctt 43974893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 45359042 - 45358996
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  45359042 aaaatgactgtcattttcaattttcaatgcaataataattttttctt 45358996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 396363 - 396315
Alignment:
Q  175 taaaatgaatgtca-ttttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  396363 taaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 396315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 9812177 - 9812221
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||||| |||||||||  |||||||||||||||||||    
T  9812177 taaaatgaatgtcactttcagtttctaatgcaataataacttttt 9812221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 43561343 - 43561390
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttcttc 223  Q
    ||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  43561343 taaaatgaatgtcaccttcagttttcaatgcaataataa-tttttcttc 43561390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 9022636 - 9022601
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagcc 162  Q
    |||||||||||||||||||||| |||||||||||||    
T  9022636 tactccctccgttttaaaatgagtgtcgttttagcc 9022601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 12339715 - 12339758
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttt 218  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||    
T  12339715 taaaatgaatgtcatttttagttttcaatacaataataattttt 12339758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 222
Target Start/End: Original strand, 17655927 - 17655958
Alignment:
Q  191 ttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||||||||||||||||||    
T  17655927 ttcagttttcaatgcaataataactttttctt 17655958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 36921361 - 36921408
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||| |||| ||||| |||||||||||||||||| ||||||||    
T  36921361 taaaatgaacgtcactttcaattttcaatgcaataataattttttctt 36921408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 37559682 - 37559635
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||| ||||||||| |||| ||||||||||||||||||    
T  37559682 taaaatcaatgtcactttcagtttccaatacaataataactttttctt 37559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 43448721 - 43448764
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||| ||| ||||||||| ||||||||||||||||||||    
T  43448721 aaaatgaatatcactttcagtttccaatgcaataataacttttt 43448764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 7839463 - 7839509
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||| ||| ||||||||||||||| |||||||    
T  7839463 aaaatgaatgtcactttcaatttccaatgcaataataaccttttctt 7839509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 13496240 - 13496286
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||| ||||||| ||| ||||||||||||||| |||||||    
T  13496240 aaaatgaatgttattttcaatttccaatgcaataataacgttttctt 13496286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 29025894 - 29025848
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||| |||||||| ||| ||||| |||||||||||||||||||||||    
T  29025894 aaaacgaatgtcactttaagtttccaatgcaataataactttttctt 29025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 9880699 - 9880666
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttag 160  Q
    |||||||||||||||||||||| |||||||||||    
T  9880699 tactccctccgttttaaaatgagtgtcgttttag 9880666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 41679337 - 41679370
Alignment:
Q  189 ttttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||| ||||||||||||||||||    
T  41679337 ttttcagttttcaatacaataataactttttctt 41679370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 44713488 - 44713521
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttag 160  Q
    |||||||||||||||||||||||||| |||||||    
T  44713488 tactccctccgttttaaaatgattgttgttttag 44713521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 36915605 - 36915573
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgtttta 159  Q
    |||||||||||||||||||||| ||||||||||    
T  36915605 tactccctccgttttaaaatgagtgtcgtttta 36915573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 39463212 - 39463248
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  39463212 atactccctccgtttcaaaatgagtgtcgttttagcc 39463248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 43724386 - 43724434
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttcttct 224  Q
    ||||||||| ||| ||||||||| |||||||||||||| ||||| ||||    
T  43724386 aaaatgaatttcactttcagtttccaatgcaataataatttttttttct 43724434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 44713538 - 44713582
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||| ||| ||||| ||| ||||||||||||||||||||    
T  44713538 taaaatgaatatcactttcattttccaatgcaataataacttttt 44713582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 9790 - 9743
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  9790 taaaatgaatgtcattttcagtttccaatgcaataataactttttctt 9743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 9571 - 9607
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  9571 atactccctccgtttcaaaatgagtgtcgttttagcc 9607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 3e-16; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 50038317 - 50038270
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  50038317 taaaatgaatgtcactttcagttttcaatgcaataataactttttctt 50038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 3152951 - 3152905
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  3152951 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 3152905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 30426469 - 30426423
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  30426469 aaaatgaatgtcattttcagtttccaatgcaataataactttttctt 30426423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 48901725 - 48901771
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  48901725 aaaatgaatgtcattttcagtttccaatgcaataataactttttctt 48901771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 48903291 - 48903337
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  48903291 aaaatgaatgtcattttcagtttccaatgcaataataactttttctt 48903337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 47137967 - 47138011
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  47137967 taaaatgaatgtcatttttagttttcaatgcaataataacttttt 47138011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 9189581 - 9189534
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  9189581 taaaatgaatgtcactttcagttttcaatgaaataataactttttctt 9189534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 11393549 - 11393596
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  11393549 taaaatgaatgtcattttcaatttccaatgcaataataactttttctt 11393596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 53200826 - 53200779
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  53200826 taaaatgaatgtcacttttagttttcaatgcaataataactttttctt 53200779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 30431125 - 30431171
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  30431125 aaaatgaatgtcactttcagttttcaatgcaataataattttttctt 30431171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 32492326 - 32492280
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||    
T  32492326 aaaatgaatgtcactttcaattttcaatgcaataataactttttctt 32492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 36460811 - 36460857
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||    
T  36460811 aaaatgaatatcactttcagttttcaatgcaataataactttttctt 36460857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 38016380 - 38016426
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  38016380 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 38016426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 45213916 - 45213821
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagccnnnnnnnnnttgtaaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||| ||||||||||||||||| |||||||||||           || |||||||||||||| |||||||||  ||||||||||||||||||||||    
T  45213916 tacttcctccgttttaaaatgagtgtcgttttagttaaaaaattgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttctt 45213821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 39356889 - 39356936
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  39356889 taaaataaatgtcactttcagttttcaatgcaataataacattttctt 39356936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 42071989 - 42072036
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  42071989 taaaatggatgtcatttttagtttccaatgcaataataactttttctt 42072036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 2458012 - 2458058
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  2458012 aaaatgaatgtcactttcagtttccaatacaataataactttttctt 2458058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 19115392 - 19115438
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  19115392 aaaatgaatgtcactttgagtttccaatgcaataataactttttctt 19115438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 36729955 - 36729909
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  36729955 aaaatgaatgtcactttcaatttccaatgcaataataactttttctt 36729909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 42571674 - 42571628
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||    
T  42571674 aaaatgaatgtcacttgcagtttccaatgcaataataactttttctt 42571628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 44676226 - 44676272
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  44676226 aaaatgaatgtcactttcagtttccaatgcaatgataactttttctt 44676272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 47895489 - 47895443
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  47895489 aaaatgaatgtcactttcaatttccaatgcaataataactttttctt 47895443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 50646255 - 50646209
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  50646255 aaaataaatgtcactttcagtttccaatgcaataataactttttctt 50646209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 8817144 - 8817189
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttc 220  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||||    
T  8817144 taaaatgaatgttattttcagttatcaatgcaataataattttttc 8817189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 52654310 - 52654355
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||    
T  52654310 aaataaatgtcactttcagttttcaatacaataataactttttctt 52654355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 33194177 - 33194133
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||    
T  33194177 taaaatgaatgtcactttcagtttccaatgcaatgataacttttt 33194133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 36844881 - 36844841
Alignment:
Q  182 aatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  36844881 aatgtcactttcagttttcaatgcaataataattttttctt 36844841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 4758995 - 4759042
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||| ||||| ||| |||||||||||||||||||||||    
T  4758995 taaaataaatgtcactttcactttccaatgcaataataactttttctt 4759042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 11019972 - 11019925
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||| ||||| |||||||||||||||||| ||||||||    
T  11019972 taaaattaatgtcactttcatttttcaatgcaataataattttttctt 11019925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 22857094 - 22857141
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||  ||||||||| |||||||||||||||||    
T  22857094 taaaatgaatgtcactttcgattttcaatgtaataataactttttctt 22857141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 31290886 - 31290921
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagcc 162  Q
    |||||||||||||||||||||| |||||||||||||    
T  31290886 tactccctccgttttaaaatgagtgtcgttttagcc 31290921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 33024446 - 33024399
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||| | ||||||||| |||||||||||||||||| ||||    
T  33024446 taaaatgaatgttactttcagtttccaatgcaataataactttatctt 33024399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 38140955 - 38140998
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||    
T  38140955 aaaatgaatgtcactttcagtttccaatgcaataataacctttt 38140998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 38363790 - 38363833
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||    
T  38363790 aaaatgaatgtcactttcagtttacaatgcaataataacctttt 38363833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 41850394 - 41850441
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||| || ||| ||||| |||||||||||||||||||||||    
T  41850394 taaaatgaatgacacttttagtttccaatgcaataataactttttctt 41850441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 47823597 - 47823550
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||||||| |||||| ||||||||||||| ||||||||    
T  47823597 taaaataaatgtcatttttagtttttaatgcaataataattttttctt 47823550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 4392201 - 4392247
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| ||||  |||||||||||||||||    
T  4392201 aaaatgaatgtcagtttcagtttccaatttaataataactttttctt 4392247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 30315314 - 30315360
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||| |||| |||||||| ||||||||||||||    
T  30315314 aaaatgaatgtcactttccgtttccaatgcaagaataactttttctt 30315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 37225793 - 37225759
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagc 161  Q
    |||||||||||||||||||||| ||||||||||||    
T  37225793 tactccctccgttttaaaatgagtgtcgttttagc 37225759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 42886980 - 42886946
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttag 160  Q
    ||||||||||||||||||||||| |||||||||||    
T  42886980 atactccctccgttttaaaatgagtgtcgttttag 42886946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 51324185 - 51324143
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttt 217  Q
    |||||| ||||||||||||||| ||||||| ||||||||||||    
T  51324185 taaaataaatgtcattttcagtattcaatgtaataataacttt 51324143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 51398015 - 51398061
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||| ||||||| ||| ||||||||||| |||||||||||||||||    
T  51398015 aaaataaatgtcacttttagttttcaatgtaataataactttttctt 51398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 20512695 - 20512659
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  20512695 atactccctccgtttcaaaatgagtgtcgttttagcc 20512659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 44854555 - 44854519
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  44854555 atactccatccgtttcaaaatgattgtcgttttagcc 44854519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 51397963 - 51397999
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  51397963 atactccatccgttttaaaatgagtgtcgttttagcc 51397999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 54261369 - 54261405
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  54261369 atactccctccgtttcaaaatgagtgtcgttttagcc 54261405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 3e-16; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 25487092 - 25487139
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  25487092 taaaatgaatgtcactttcagttttcaatgcaataataactttttctt 25487139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 9915447 - 9915494
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  9915447 taaaatgaatgtcattttcagtttccaatgcaataataaatttttctt 9915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 15573612 - 15573655
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  15573612 aaaatgaatgtcactttcagttttcaatgcaataataacttttt 15573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 15823038 - 15823085
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||    
T  15823038 taaaatgaatgtcactttcagtttccaatgcaataataactttttctt 15823085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 10842785 - 10842831
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||    
T  10842785 aaaatgaatgtcactttcagttttcaatgcaataataacattttctt 10842831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 26352227 - 26352181
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  26352227 aaaatgaatgtcacttttagttttcaatgcaataataactttttctt 26352181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 29567901 - 29567947
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  29567901 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 29567947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 32807084 - 32807038
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  32807084 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 32807038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 38531443 - 38531397
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  38531443 aaaatgaatgtcattttcagtttccaatgcaataataattttttctt 38531397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 40717442 - 40717396
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  40717442 aaaatgaatgtcactttcagttttcaatgcaataataattttttctt 40717396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 50094234 - 50094280
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  50094234 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 50094280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 50249315 - 50249361
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  50249315 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 50249361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 46554754 - 46554846
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagccnnnnnnnnnttgtaaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||||||||||||| |||||||||| ||         || ||||||||||||||  |||||||| || |||||||||||||||||    
T  46554754 tactccctccgttttaaaatgagtgtcgttttaaccaaaaaattgttttaaaatgaatgtcaccttcagtttccactgcaataataacttttt 46554846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 14373560 - 14373516
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||||||||||||||| |||||||| |||||||||||    
T  14373560 taaaatgaatgtcattttcagtttccaatgcaacaataacttttt 14373516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 12591229 - 12591182
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  12591229 taaaatgaatgtcacttttagtttccaatgcaataataactttttctt 12591182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 13408412 - 13408365
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||| | | |||||||||||||||||||||||||||||||||    
T  13408412 taaaatgaattttactttcagttttcaatgcaataataactttttctt 13408365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 26595216 - 26595169
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  26595216 taaaatgaatgtcactttcagtttacaatgcaataataaatttttctt 26595169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 33622512 - 33622465
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||||||||  |||||||||||||||||||||| ||||    
T  33622512 taaaatgaatgtcattttcgattttcaatgcaataataactttatctt 33622465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 44258654 - 44258607
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  44258654 taaaatgaatgtcactttcagtttccaatgcaataataattttttctt 44258607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 46045978 - 46046021
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||    
T  46045978 aaaatgaatgtcactttcagttttcgatgcaataataacttttt 46046021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 46286965 - 46286918
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  46286965 taaaaagaatgtcactttcatttttcaatgcaataataactttttctt 46286918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 48009014 - 48009061
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  48009014 taaaatgaatggcatttttagtttttaatgcaataataactttttctt 48009061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 5463580 - 5463626
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  5463580 aaaatgaatgtcactttcagtttccaatgcaattataactttttctt 5463626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 18794739 - 18794705
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagc 161  Q
    |||||||||||||||||||||||||||||||||||    
T  18794739 tactccctccgttttaaaatgattgtcgttttagc 18794705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 27720963 - 27721009
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||    
T  27720963 aaaatgaatgtcactttcagttttcaatataataataactttttctt 27721009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 34032226 - 34032180
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  34032226 aaaatgaatgtcactttcagtttccaatgcaataataattttttctt 34032180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 34047381 - 34047335
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  34047381 aaaatgaatgtcactttgagtttccaatgcaataataactttttctt 34047335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 35848075 - 35848033
Alignment:
Q  180 tgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||| ||||||||| |||||||||||||||||||||||    
T  35848075 tgaatgtcactttcagtttacaatgcaataataactttttctt 35848033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 39125653 - 39125699
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  39125653 aaaatgactgtcattttaagttttcaatgcaataataaatttttctt 39125699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 52024380 - 52024334
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  52024380 aaaataaatgttattttcagttttcaatgcaataataaatttttctt 52024334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 14593465 - 14593420
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttctt 14593420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 52125281 - 52125232
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataataactttttcttctca 226  Q
    |||||||||||| ||||||||| |||||||||||||| ||||| ||||||    
T  52125281 aaatgaatgtcaatttcagtttccaatgcaataataattttttattctca 52125232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 1740788 - 1740744
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||    
T  1740788 taaaatgaatgtcactttcagtttccaatgaaataataacttttt 1740744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 48025452 - 48025356
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagccnnnnnnnnnttgt---aaaatgaatgtcattttcagttttcaatgcaataataactttttc 220  Q
    ||||||||||||||||||||||| ||||||||||| |         ||||   ||||||||||||| |||| |||| |||||||||||||||||||||    
T  48025452 atactccctccgttttaaaatgagtgtcgttttag-caaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttc 48025356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 13408246 - 13408281
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagcc 162  Q
    |||||||||||||||||||||| |||||||||||||    
T  13408246 tactccctccgttttaaaatgagtgtcgttttagcc 13408281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 34110535 - 34110578
Alignment:
Q  179 atgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||| | ||||||||| |||||||||||||||||||||||    
T  34110535 atgaatgttactttcagtttccaatgcaataataactttttctt 34110578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 44108603 - 44108650
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||| ||||||||| |||| ||||||||||||||||||    
T  44108603 taaaataaatgtcactttcagtttccaatacaataataactttttctt 44108650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 44557191 - 44557144
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||||||    
T  44557191 taaaatgaatgtcactttcagtctccaatgcaataataacattttctt 44557144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 46271463 - 46271420
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||    
T  46271463 aaaatgaatgtcattttcagtttccaatggaataataatttttt 46271420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 12002200 - 12002234
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagc 161  Q
    |||||||||||||||||||||| ||||||||||||    
T  12002200 tactccctccgttttaaaatgagtgtcgttttagc 12002234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 16757340 - 16757294
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| |||||| ||||||||| ||||||||||||||||| |||||    
T  16757340 aaaatgtatgtcactttcagtttccaatgcaataataacttattctt 16757294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 24483393 - 24483439
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||| ||||||||||| ||||||    
T  24483393 aaaatgaatgtcagtttcagtttccaatacaataataactgtttctt 24483439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 24884366 - 24884400
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagc 161  Q
    |||||||||||||||||||||| ||||||||||||    
T  24884366 tactccctccgttttaaaatgaatgtcgttttagc 24884400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 26755225 - 26755271
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||| || |||||||||||||||    
T  26755225 aaaatgaatgtcactttcagtttccaatacattaataactttttctt 26755271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 27208995 - 27209037
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||| |||| |||| ||||||||||||||||||||    
T  27208995 aaatgaatgtcactttcggtttccaatgcaataataacttttt 27209037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 28200424 - 28200390
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttag 160  Q
    ||||||||||||||||||||||| |||||||||||    
T  28200424 atactccctccgttttaaaatgagtgtcgttttag 28200390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 30292944 - 30292986
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttt 217  Q
    ||||||||||| || ||||||||| ||||||||||||||||||    
T  30292944 taaaatgaatgccactttcagtttccaatgcaataataacttt 30292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 31491916 - 31491870
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||| |||||||||  ||||||||||||||||    
T  31491916 aaaatgaatgtcactttcaattttcaatgtcataataactttttctt 31491870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 49403017 - 49402971
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||| ||| || |||||||||| |||||||||||||||||||||||    
T  49403017 aaaataaatatcgttttcagtttccaatgcaataataactttttctt 49402971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 49468857 - 49468811
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||| | ||||||||| ||||||||||||||| |||||||    
T  49468857 aaaatgaatgtaactttcagtttccaatgcaataataacattttctt 49468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 25151821 - 25151866
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||| |||| |||| ||||||||||||||| |||||||    
T  25151821 aaatgaatgtcactttcggtttccaatgcaataataacattttctt 25151866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 43358397 - 43358364
Alignment:
Q  128 actccctccgttttaaaatgattgtcgttttagc 161  Q
    ||||||||||||||||||||| ||||||||||||    
T  43358397 actccctccgttttaaaatgagtgtcgttttagc 43358364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 45377070 - 45377103
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgtttta 159  Q
    ||||||||||||||| ||||||||||||||||||    
T  45377070 atactccctccgtttcaaaatgattgtcgtttta 45377103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 2458961 - 2458997
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  2458961 atactccctccgtttcaaaatgagtgtcgttttagcc 2458997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 7375242 - 7375278
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  7375242 atactccctccgtttcaaaatgagtgtcgttttagcc 7375278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 24884419 - 24884463
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||| ||||||| ||||| ||| ||||||||||||||||||||    
T  24884419 taaaataaatgtcactttcaatttccaatgcaataataacttttt 24884463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 32807136 - 32807100
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  32807136 atactccctccgtttcaaaatgagtgtcgttttagcc 32807100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 3958 - 3912
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  3958 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 3912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 18402 - 18356
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  18402 aaaatgaatgtcattttcagtttccaatgcaataataactttttctt 18356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 19674985 - 19675031
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  19674985 aaaatgaatgtcattttcagtttccaatgcaataataactttttctt 19675031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 24163913 - 24163816
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagccnnnnnnnnn-ttgtaaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||||||||| |||| ||||||||          || |||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  24163913 atactccctccgttttaaaatgagtgtcattttagccaaaaaaattgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 24163816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 29713554 - 29713508
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  29713554 aaaatgaatgtcattttccgtttccaatgcaataataactttttctt 29713508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 9940652 - 9940695
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttt 218  Q
    |||||||| ||||| |||||||||||||||||||||||||||||    
T  9940652 taaaatgattgtcactttcagttttcaatgcaataataactttt 9940695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 13503996 - 13503953
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  13503996 aaaatgaatgtcactttcagtttccaatgcaataataacttttt 13503953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 18737239 - 18737192
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  18737239 taaaatgaatgtcactttcagtttccaatgcaataataactctttctt 18737192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 24556077 - 24556030
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  24556077 taaaataaatgtcattttcagttttcaatgtaataataattttttctt 24556030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 31443594 - 31443551
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    
T  31443594 aaaatgaatgttattttcagtttccaatgcaataataacttttt 31443551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 234039 - 234085
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  234039 aaaatgaatgtcacttttagtttccaatgcaataataactttttctt 234085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 4850643 - 4850597
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  4850643 aaaatgaatgtcactttcaatttccaatgcaataataactttttctt 4850597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 23259473 - 23259431
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttt 218  Q
    ||||||||||||||||||||||| |||||||| ||||||||||    
T  23259473 aaaatgaatgtcattttcagtttccaatgcaaaaataactttt 23259431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 29399951 - 29399997
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  29399951 aaaatgaatgtcactttcagtttccaatgcaataataattttttctt 29399997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 12588530 - 12588579
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttcttct 224  Q
    |||||||||||| | ||||||||| |||||||||||||||||||| ||||    
T  12588530 taaaatgaatgttactttcagtttgcaatgcaataataacttttttttct 12588579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 32429239 - 32429335
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagccnnnnnnnnnttgtaaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||| ||||||||||||||| |||||||||||||         ||  |||| |||||||| ||| | ||| |||||||||||||||||||||||    
T  32429239 atactccatccgttttaaaatgagtgtcgttttagccaaaaaattgtttcaaaacgaatgtcacttttaatttccaatgcaataataactttttctt 32429335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 17552392 - 17552357
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataata 212  Q
    |||||||||||||||||||||| |||||||||||||    
T  17552392 aaatgaatgtcattttcagtttccaatgcaataata 17552357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 31233774 - 31233727
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| |||||||||||| |||||||||||  |||||||    
T  31233774 taaaatgaatgtcactttcagttttcattgcaataataatattttctt 31233727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 8030647 - 8030693
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||| | ||||||||||||||| |||||||| ||||||||    
T  8030647 aaaatgaatgttactttcagttttcaatgtaataataattttttctt 8030693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 12063657 - 12063615
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||| ||||||||| |||||||||||||| |||||    
T  12063657 aaatgaatgtcactttcagtttccaatgcaataataatttttt 12063615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 20226627 - 20226585
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||| |||||||||||||||||| ||||||||||||| |||||    
T  20226627 aaataaatgtcattttcagtttttaatgcaataataatttttt 20226585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 22120611 - 22120569
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||| |||||||||||||||||| ||||||||||||| |||||    
T  22120611 aaataaatgtcattttcagtttttaatgcaataataatttttt 22120569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Original strand, 23936494 - 23936528
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttag 160  Q
    ||||||||||||||||||||||| |||||||||||    
T  23936494 atactccctccgttttaaaatgagtgtcgttttag 23936528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 19600376 - 19600409
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttag 160  Q
    |||||| |||||||||||||||||||||||||||    
T  19600376 tactccatccgttttaaaatgattgtcgttttag 19600409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 12323032 - 12322996
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataata 212  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  12323032 aaaatgaatgtcactttcagtttccaatgcaataata 12322996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 17246805 - 17246769
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  17246805 atactccctccgtttcaaaatgagtgtcgttttagcc 17246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 34513737 - 34513705
Alignment:
Q  190 tttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||| |||||||||||||||||||||||    
T  34513737 tttcagtttccaatgcaataataactttttctt 34513705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 36164853 - 36164938
Alignment:
Q  137 gttttaaaatgattgtcgttttagccnnnnnnnnnttgtaaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||| |||||||||||||         || |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  36164853 gttttaaaatgagtgtcgttttagccaaaaaattattttaaaatgaatgtcattttcagtttccaatgcagtaataactttttctt 36164938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 42104263 - 42104165
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagccnnnnnnnnnttgt---aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||| |||||||||||||         ||||   ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  42104263 tactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 42104165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 43584526 - 43584482
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  43584526 taaaatgaatgtcgttttcagttttcaatgcaataataacttttt 43584482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 15167158 - 15167115
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  15167158 aaaatgaatgtcactttcagttttcaatgcaataataacttttt 15167115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 26660759 - 26660806
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  26660759 taaaatgaatgtcactttcaattttcaatgcaataataactttttctt 26660806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 26932352 - 26932399
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  26932352 taaaatgaatgtcactttcaattttcaatgcaataataactttttctt 26932399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 27797785 - 27797832
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||    
T  27797785 taaaatgaatgtcactttcagtttccaatgcaataataactttttctt 27797832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 39566187 - 39566234
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||    
T  39566187 taaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39566234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 6518981 - 6519027
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||    
T  6518981 aaaatgaatgtcgctttcagttttcaatgcaataataactttttctt 6519027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 7317033 - 7317079
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  7317033 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 7317079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 10345080 - 10345034
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  10345080 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 10345034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 14620642 - 14620596
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  14620642 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 14620596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 34446175 - 34446129
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||    
T  34446175 aaaatgaatgtcattttcagttttcaatacaataataacattttctt 34446129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 35766048 - 35766002
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  35766048 aaaatgaatgtcactttcagttttcaatacaataataactttttctt 35766002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 39729964 - 39730010
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  39729964 aaaatgaatgttattttcagtttccaatgcaataataactttttctt 39730010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 36073777 - 36073732
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  36073777 aaatgaatgtcattttaaattttcaatgcaataataactttttctt 36073732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 3306158 - 3306111
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  3306158 taaaatgaatgtcactttcagtttccaatgcaataataattttttctt 3306111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 4630869 - 4630916
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  4630869 taaaataaatgtcactttcagttttcaatacaataataactttttctt 4630916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 7580018 - 7579971
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||| | |||||||||||||| ||||||||||||||||||    
T  7580018 taaaatgaatgttactttcagttttcaatacaataataactttttctt 7579971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 2729934 - 2729888
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  2729934 aaaatgaatgtcactttcactttccaatgcaataataactttttctt 2729888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 3025079 - 3025033
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  3025079 aaaatgaatgtcacttttagtttccaatgcaataataactttttctt 3025033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 13761562 - 13761608
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  13761562 aaaatgaatgtcactttcacttttcaatgcaataataaatttttctt 13761608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 21319458 - 21319412
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||||| || |||||||||||||||||||||||    
T  21319458 aaaatgaatgtcactttcagcttccaatgcaataataactttttctt 21319412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 38362285 - 38362243
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttt 218  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  38362285 aaaatgaatgtcactttcaattttcaatgcaataataactttt 38362243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 39504726 - 39504774
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaa-taataactttttctt 222  Q
    |||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  39504726 taaaatgaatgtcactttcagtttccaatgcaattaataactttttctt 39504774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 42978215 - 42978176
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataac 214  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  42978215 taaaatgaatatcactttcagttttcaatgcaataataac 42978176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 9066571 - 9066525
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||| | ||||||||||||||||||||||||  |||||||    
T  9066571 aaaatgaatgttactttcagttttcaatgcaataataaaattttctt 9066525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 24280998 - 24281044
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||| ||||| |||||||||||||| ||||||||    
T  24280998 aaaatgaatgtcacttttagtttccaatgcaataataattttttctt 24281044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 24381214 - 24381168
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||| ||||| |||||||||||||| ||||||||    
T  24381214 aaaatgaatgtcacttttagtttccaatgcaataataattttttctt 24381168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 15400413 - 15400380
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttag 160  Q
    |||||||||||||||||||||| |||||||||||    
T  15400413 tactccctccgttttaaaatgagtgtcgttttag 15400380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 24436454 - 24436487
Alignment:
Q  129 ctccctccgttttaaaatgattgtcgttttagcc 162  Q
    |||||||||||||||||||| |||||||||||||    
T  24436454 ctccctccgttttaaaatgagtgtcgttttagcc 24436487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 38369827 - 38369860
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttag 160  Q
    |||||||||||||||||||||| |||||||||||    
T  38369827 tactccctccgttttaaaatgaatgtcgttttag 38369860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 8336557 - 8336517
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactt 216  Q
    ||||||||||||| || || |||||||||||||||||||||    
T  8336557 aaaatgaatgtcacttccatttttcaatgcaataataactt 8336517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 14005911 - 14005943
Alignment:
Q  190 tttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||| |||||||||||||||||||||||    
T  14005911 tttcagtttccaatgcaataataactttttctt 14005943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 26660996 - 26660960
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  26660996 atactccctccgttttaaaatgagtgtcgctttagcc 26660960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 26932589 - 26932553
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  26932589 atactccctccgttttaaaatgagtgtcgctttagcc 26932553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 27600418 - 27600450
Alignment:
Q  190 tttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||| |||||||||||||||||||||||    
T  27600418 tttcagtttccaatgcaataataactttttctt 27600450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 29653712 - 29653680
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgtttta 159  Q
    |||||||||||||||||||||| ||||||||||    
T  29653712 tactccctccgttttaaaatgagtgtcgtttta 29653680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 34972561 - 34972597
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  34972561 atactccctccgttttaaaatgagtgtcgctttagcc 34972597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 38990062 - 38990030
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaat 208  Q
    ||||||||||||||||| |||||||||||||||    
T  38990062 aaaatgaatgtcattttaagttttcaatgcaat 38990030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 40776725 - 40776681
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||| ||||||||| ||||| ||||||||| ||||||||||||||    
T  40776725 taaattgaatgtcactttcatttttcaatgtaataataacttttt 40776681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 42662088 - 42662044
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||| ||||| ||||||||||| |||||||| |||||    
T  42662088 taaaatgaatgttatttttagttttcaatgtaataataatttttt 42662044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 2728550 - 2728504
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  2728550 aaaatgaatgtcattttcagtttccaatgcaataataactttttctt 2728504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 45043741 - 45043694
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||    
T  45043741 taaaatgaatgtcactttcagttttcaatgcaataataattttttctt 45043694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 4505342 - 4505388
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  4505342 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 4505388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 10573306 - 10573260
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  10573306 aaaatgaatgtcatttttagtttccaatgcaataataactttttctt 10573260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 19451363 - 19451317
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  19451363 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 19451317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 19878653 - 19878699
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  19878653 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 19878699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 20448044 - 20448090
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  20448044 aaaatgaatgtcactttcagttttcaatgcaataataattttttctt 20448090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 22220511 - 22220465
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  22220511 aaaataaatgtcattttcaattttcaatgcaataataactttttctt 22220465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 39982108 - 39982154
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  39982108 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39982154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 52957942 - 52957896
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  52957942 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 52957896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 6991414 - 6991367
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  6991414 taaaatgaatgtcactttcagttttcaatacaataataattttttctt 6991367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 21864536 - 21864489
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||| | ||||||||| |||||||||||||||||||||||    
T  21864536 taaaatgaatgttactttcagtttccaatgcaataataactttttctt 21864489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 21920397 - 21920350
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||| | ||||||||| |||||||||||||||||||||||    
T  21920397 taaaatgaatgttactttcagtttccaatgcaataataactttttctt 21920350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 25231179 - 25231226
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  25231179 taaaatgaatgtcactttcaatttccaatgcaataataactttttctt 25231226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 41920462 - 41920415
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  41920462 taaaataaatgtcattttcagtttccaaagcaataataactttttctt 41920415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 49089469 - 49089512
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  49089469 aaaatgaatgtcacttttagttttcaatgcaataataacttttt 49089512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 50623087 - 50623134
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  50623087 taaaatgtatgttatttttagttttcaatgcaataataactttttctt 50623134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 56460087 - 56460134
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  56460087 taaaatgaatgtcactttcagctttcaatgcaatagtaactttttctt 56460134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 1819567 - 1819613
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  1819567 aaaatgaatgtcactttcagtttccaatgcaataataaatttttctt 1819613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 24940884 - 24940930
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||    
T  24940884 aaaatgaatgtcattttcgatttccaatgcaataataactttttctt 24940930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 37624561 - 37624607
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  37624561 aaaataaatgtcactttcagtttccaatgcaataataactttttctt 37624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 40345499 - 40345453
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  40345499 aaaatgaatgtcactttcagtttccaatgcaataataattttttctt 40345453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 50621339 - 50621293
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  50621339 aaaataaatgtcactttaagttttcaatgcaataataactttttctt 50621293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 52253850 - 52253896
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| ||||||||||||||||| |||||    
T  52253850 aaaatgaatgtcactttcagtttccaatgcaataataacttcttctt 52253896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 52915694 - 52915648
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||    
T  52915694 aaaatgaatgtcgctttcagtttccaatgcaataataactttttctt 52915648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 50203032 - 50203125
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagccnnnnnnnnnttgtaaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||||||||||| ||||||||||||          || |||||||||||||| |||||||   |||||||||||||||||||||||    
T  50203032 tactccatccgttttaaaatgagtgtcgttttagcaaaaaaattgttttaaaatgaatgtcactttcagtc--caatgcaataataactttttctt 50203125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 25123872 - 25123832
Alignment:
Q  182 aatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  25123872 aatgtcattttcagttttcaatacaataataattttttctt 25123832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 27943698 - 27943658
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactt 216  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  27943698 aaaatgaatgtcactttcaattttcaatgcaataataactt 27943658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 38510387 - 38510351
Alignment:
Q  186 tcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||| |||||||||||||||||||||||||||||    
T  38510387 tcatttttagttttcaatgcaataataactttttctt 38510351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 47321385 - 47321349
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||||||||||| |||||||||||||    
T  47321385 atactccctccgttttaaaatgagtgtcgttttagcc 47321349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 29370607 - 29370654
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||| ||||||| ||||||||||||||  |||||||||||||||||    
T  29370607 taaaataaatgtcactttcagttttcaatataataataactttttctt 29370654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 40837135 - 40837178
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||    
T  40837135 aaaatgaatgtcactttcattttccaatgcaataataacttttt 40837178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 44572018 - 44571971
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||  ||||||||| ||||||||||| |||||||||||    
T  44572018 taaaatgaatgtcgctttcagtttccaatgcaataaaaactttttctt 44571971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 49080628 - 49080586
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  49080628 aaaatgaatgtcactttcagtttt-aatgcaataataacttttt 49080586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 52848207 - 52848160
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||| ||| |||||||||||||| ||||||||    
T  52848207 taaaatgaatgtcactttcaatttccaatgcaataataattttttctt 52848160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Original strand, 7905922 - 7905956
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttag 160  Q
    ||||||||||||||||||||||| |||||||||||    
T  7905922 atactccctccgttttaaaatgagtgtcgttttag 7905956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 7906148 - 7906102
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |  ||||||||||||||||||||    
T  7906148 aaaatgaatgtcactttcagtttccggtgcaataataactttttctt 7906102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 19930719 - 19930765
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||| ||| | |||||||||||||||||||||    
T  19930719 aaaatgaatgtcactttcaatttccgatgcaataataactttttctt 19930765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 30261264 - 30261310
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| ||||||||||||||  |||||||    
T  30261264 aaaatgaatgtcactttcagtttccaatgcaataataatgttttctt 30261310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 41496210 - 41496256
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||| ||| ||| |||||||||||||| ||||||||||||||||||    
T  41496210 aaaataaatctcactttcagttttcaatacaataataactttttctt 41496256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 44572070 - 44572036
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagc 161  Q
    |||||||||||||||||||||| ||||||||||||    
T  44572070 tactccctccgttttaaaatgagtgtcgttttagc 44572036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 47817743 - 47817789
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||| | | ||||||||| |||||||||||||||||||||||    
T  47817743 aaaatgaatttaactttcagtttgcaatgcaataataactttttctt 47817789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 51733646 - 51733600
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||||||||  ||||||||||||| ||||||||    
T  51733646 aaaatgaatgtcactttcagtttctaatgcaataataattttttctt 51733600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 36558452 - 36558407
Alignment:
Q  178 aatgaatgtcattttcagttttcaatgcaataataactttttcttc 223  Q
    |||||||| |||||||| ||| | ||||||||||||||||||||||    
T  36558452 aatgaatgccattttcaatttcccatgcaataataactttttcttc 36558407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 50623325 - 50623292
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttag 160  Q
    |||||||||||||||||||||| |||||||||||    
T  50623325 tactccctccgttttaaaatgagtgtcgttttag 50623292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 30780326 - 30780294
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgtttta 159  Q
    |||||||||||||||||||||| ||||||||||    
T  30780326 tactccctccgttttaaaatgagtgtcgtttta 30780294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 34316226 - 34316270
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||| ||||||| ||||||||| |||||||||||||| |||||    
T  34316226 taaaataaatgtcactttcagtttccaatgcaataataatttttt 34316270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 40345262 - 40345298
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  40345262 atactccctccgttttaaaatgaatgtcgctttagcc 40345298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 47306296 - 47306264
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaat 208  Q
    ||||||||||||||||||| |||||||||||||    
T  47306296 aaaatgaatgtcattttcaattttcaatgcaat 47306264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 47817689 - 47817725
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  47817689 atactccctccgtttcaaaatgagtgtcgttttagcc 47817725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 52162110 - 52162154
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||||| ||||| ||||||| |||||||||| |||||    
T  52162110 taaaatgaatgtcactttcaattttcaacgcaataataatttttt 52162154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 54042097 - 54042133
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  54042097 atactccatccgttttaaaatgagtgtcgttttagcc 54042133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 55126737 - 55126701
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  55126737 atactccatccgttttaaaatgaatgtcgttttagcc 55126701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 18719579 - 18719534
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  18719579 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 18719534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 17703023 - 17703070
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  17703023 taaaatgaatgtcactttcaattttcaatgcaataataactttttctt 17703070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 25383633 - 25383586
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  25383633 taaaatgaatgttattttcagtttccaatgcaataataactttttctt 25383586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 29808816 - 29808863
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  29808816 taaaatgaatgtcactttcagttttcaatgcaatcataactttttctt 29808863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 45301769 - 45301816
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||    
T  45301769 taaaatgaatgtcactttcagtttccaatgcaataataactttttctt 45301816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 441379 - 441333
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  441379 aaaatgaatgtcactttctgttttcaatgcaataataactttttctt 441333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 9391706 - 9391660
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  9391706 aaaatgaatgtcattttcagtttttaatgcaataataattttttctt 9391660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 16463180 - 16463134
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  16463180 aaaataaatgtcactttcagttttcaatgcaataataactttttctt 16463134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 18579172 - 18579218
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  18579172 aaaatgaatgtcactttcagttttcaatgcaataataattttttctt 18579218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 43427435 - 43427389
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  43427435 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 43427389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 43971509 - 43971555
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  43971509 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 43971555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 38926610 - 38926651
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactt 216  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  38926610 taaaatgaatgtcactttcagttttcaatgcaataataactt 38926651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 28072571 - 28072615
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||||| |||||||||||||| |||||||||||||||    
T  28072571 taaaatgaatgtcactttcagttttcaatacaataataacttttt 28072615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 4469505 - 4469552
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||| ||| |||||||||||||| ||||||||||||||||||    
T  4469505 taaaatgaatttcactttcagttttcaatacaataataactttttctt 4469552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 5717517 - 5717564
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  5717517 taaaatgaatgtcactttcagtttccaatgcaataataaatttttctt 5717564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 6220553 - 6220506
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  6220553 taaaatgaatgtcacttttagtttccaatgcaataataactttttctt 6220506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 8540042 - 8540089
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||||    
T  8540042 taaaatgaatgacattttcagtttccagtgcaataataactttttctt 8540089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 14285943 - 14285986
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||||||||||||| |||| |||||||||||||||    
T  14285943 aaaatgaatgtcattttcagtttccaatacaataataacttttt 14285986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 14833884 - 14833837
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||| |||||||||||| ||||||||||||||    
T  14833884 taaaatgaatgtcactttcaattttcaatgcaacaataactttttctt 14833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 29411700 - 29411747
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  29411700 taaaatgaatgtcacttttagttttcaatgcaataataaccttttctt 29411747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 45423622 - 45423669
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  45423622 taaaatgattgttattttcagtttccaatgcaataataactttttctt 45423669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 4133029 - 4133075
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||    
T  4133029 aaaatgaatgtcactttcggtttccaatgcaataataactttttctt 4133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 7028960 - 7028914
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  7028960 aaaatgaatgtcattttcactttccaatgcaataatgactttttctt 7028914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 12342098 - 12342144
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||    
T  12342098 aaaatgaatgtcactttcggtttccaatgcaataataactttttctt 12342144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 16792488 - 16792534
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  16792488 aaaatgaatgtcactttgagtttccaatgcaataataactttttctt 16792534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 29396828 - 29396782
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||    
T  29396828 aaaatgaatgtcactttcggtttccaatgcaataataactttttctt 29396782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 27964517 - 27964472
Alignment:
Q  177 aaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||| ||| ||||| |||||||||||||||||||||||    
T  27964517 aaatgaatgtcacttttagtttccaatgcaataataactttttctt 27964472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 11188640 - 11188600
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactt 216  Q
    ||||||||||||| |||||||||||||||||| ||||||||    
T  11188640 aaaatgaatgtcactttcagttttcaatgcaacaataactt 11188600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 45082046 - 45082002
Alignment:
Q  178 aatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||||    
T  45082046 aatgaatgtcactttcagtttccaatgcaataataattttttctt 45082002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 4051852 - 4051809
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||    
T  4051852 aaaatgaatgtcactttcagtttccaatgcaataataatttttt 4051809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 7644650 - 7644697
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||| ||||||  |||||||||||||||||    
T  7644650 taaaatgaatgtcactttcagtattcaatataataataactttttctt 7644697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 12342334 - 12342299
Alignment:
Q  127 tactccctccgttttaaaatgattgtcgttttagcc 162  Q
    |||||||||||||||||||||| |||||||||||||    
T  12342334 tactccctccgttttaaaatgagtgtcgttttagcc 12342299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 12566128 - 12566085
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||    
T  12566128 aaaatgaatgtcactttcagtttccaatgcaataataatttttt 12566085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 32228160 - 32228113
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| |||  ||||| ||||||||||||||||||||||    
T  32228160 taaaatgaatgtcacttttggttttaaatgcaataataactttttctt 32228113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 35799208 - 35799251
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||||    
T  35799208 aaaataaatgtcactttcagtttccaatgcaataataacttttt 35799251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 36177981 - 36178024
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||    
T  36177981 aaaatgaatgtcactttccgtttccaatgcaataataacttttt 36178024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 37038915 - 37038880
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataa 210  Q
    |||||||||||||| |||||||||||||||||||||    
T  37038915 taaaatgaatgtcactttcagttttcaatgcaataa 37038880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 40608752 - 40608706
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||| |||||||||||||||||| ||||    
T  40608752 taaaatgaatgtcactttcagttt-caatgcaataataactttctctt 40608706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 4658381 - 4658335
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||| |||||| ||||||||| |||||||| ||||||||    
T  4658381 aaaatgaatgtctttttcatttttcaatgtaataataattttttctt 4658335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 7042334 - 7042288
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||||||||| ||  |||||||||||| ||||||||||    
T  7042334 aaaatgaatgtcattttcacttcccaatgcaataatgactttttctt 7042288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 13561999 - 13562045
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||||||    
T  13561999 aaaataaatgtcactttcagtttctaatgcaataataactttttctt 13562045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 19164362 - 19164408
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||| || ||||| |||| ||||||||||||||||||||||    
T  19164362 aaaatgaatggcaatttcaatttttaatgcaataataactttttctt 19164408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 22620482 - 22620436
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||| ||||  ||||||||| |||||||||||||||||||||||    
T  22620482 aaaatgagtgtcgctttcagtttccaatgcaataataactttttctt 22620436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 34546479 - 34546433
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||| ||| |||||||||||||| ||||||||    
T  34546479 aaaatgaatgtcactttcaatttccaatgcaataataattttttctt 34546433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 35799457 - 35799423
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttag 160  Q
    ||||||||||||||||||||||| |||||||||||    
T  35799457 atactccctccgttttaaaatgaatgtcgttttag 35799423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 42753756 - 42753793
Alignment:
Q  182 aatgtcattttcagttttcaatgcaataataacttttt 219  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  42753756 aatgtcactttcagttttcaatgcgataataacttttt 42753793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 441142 - 441178
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  441142 atactccctccgtttcaaaatgagtgtcgttttagcc 441178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 777774 - 777818
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||||||||||| |||  |||||||||||||| ||||    
T  777774 taaaatgaatgtcattttcaatttctaatgcaataataacctttt 777818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 4132977 - 4133013
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  4132977 atactccctccgtttcaaaatgagtgtcgttttagcc 4133013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 6247674 - 6247706
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgtttt 158  Q
    ||||||||||||||||||||||| |||||||||    
T  6247674 atactccctccgttttaaaatgagtgtcgtttt 6247706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 27986040 - 27986083
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||    
T  27986040 taaaatgaatgtcactttcagttttcaatacaataa-aacttttt 27986083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 42004895 - 42004939
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataacttttt 219  Q
    |||||||||||||||||| | ||| |||||||||||||| |||||    
T  42004895 taaaatgaatgtcatttttaatttccaatgcaataataatttttt 42004939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 43481019 - 43480971
Alignment:
Q  176 aaaatgaatgtcattttcagt-tttcaatgca-ataataactttttctt 222  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  43481019 aaaatgactgtcattttcagtgtttcaatgcatataataactttttctt 43480971  T

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Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 24888 - 24842
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  24888 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 24842  T

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Target: scaffold2107 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 662 - 615
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  662 taaaatgaatgtcactttcagtttccaatgcaataataattttttctt 615  T

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Target: scaffold0294 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 3652 - 3606
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  3652 aaaatgaatgtcactttcagtttccaatacaataataactttttctt 3606  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 4144 - 4192
Alignment:
Q  175 taaaatgaatgtcatttt-cagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||||||| || |||||||||||||||||| ||||||||    
T  4144 taaaatgaatgtcatttttcaattttcaatgcaataataattttttctt 4192  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 153318 - 153362
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttc 220  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||    
T  153318 aaaatgaatgtcattttcaattttcaatgcaatgataactatttc 153362  T

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Target: scaffold0502 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 720 - 673
Alignment:
Q  175 taaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    |||||||||||||| || || ||| |||||||||||||||||||||||    
T  720 taaaatgaatgtcacttacaatttccaatgcaataataactttttctt 673  T

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Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 1561 - 1515
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| |||||||||  |||||||| |||||||||||||    
T  1561 aaaatgaatgtcactttcagtttctaatgcaatgataactttttctt 1515  T

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Target: scaffold0048 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 62638 - 62684
Alignment:
Q  176 aaaatgaatgtcattttcagttttcaatgcaataataactttttctt 222  Q
    ||||||||||||| ||||||||| | ||| |||||||||||||||||    
T  62638 aaaatgaatgtcactttcagtttcctatgtaataataactttttctt 62684  T

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Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 70654 - 70618
Alignment:
Q  126 atactccctccgttttaaaatgattgtcgttttagcc 162  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  70654 atactccctccgtttcaaaatgagtgtcgttttagcc 70618  T

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