View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1833_low_18 (Length: 232)
Name: NF1833_low_18
Description: NF1833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1833_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 79 - 221
Target Start/End: Complemental strand, 16817264 - 16817122
Alignment:
| Q |
79 |
cctcaaactcagacagagttgcattgtctctatctgcacatctgttaacaactcataacattactttaatcaaaactatcaaagtctacaactgcaacac |
178 |
Q |
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| T |
16817264 |
cctcaaactctgacagagttgcattgtctctatctgcacatctgttaacaactcattacattactttaatcaaaactatcaaagtttacaactgcaacac |
16817165 |
T |
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| Q |
179 |
acttgttaatattgaaaaatcagaaatggtgtattttctatta |
221 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16817164 |
acttgttaatattgaaaaatcagaaatggtgtattttctatta |
16817122 |
T |
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