View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18344_low_5 (Length: 248)

Name: NF18344_low_5
Description: NF18344
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18344_low_5
NF18344_low_5
[»] chr1 (80 HSPs)
chr1 (6-190)||(44707733-44707917)
chr1 (11-220)||(39864047-39864251)
chr1 (6-220)||(24991626-24991836)
chr1 (6-220)||(12039018-12039227)
chr1 (6-182)||(9307595-9307772)
chr1 (6-220)||(23168966-23169173)
chr1 (11-190)||(2572429-2572608)
chr1 (6-190)||(28748952-28749136)
chr1 (44-190)||(8896343-8896490)
chr1 (6-181)||(31042767-31042942)
chr1 (6-176)||(6023622-6023792)
chr1 (28-181)||(7759185-7759338)
chr1 (11-162)||(30754919-30755070)
chr1 (11-181)||(16395025-16395193)
chr1 (6-192)||(20209813-20209999)
chr1 (14-190)||(37506085-37506264)
chr1 (13-181)||(26093364-26093532)
chr1 (11-181)||(33733241-33733410)
chr1 (28-162)||(37276450-37276584)
chr1 (44-189)||(49223997-49224142)
chr1 (6-162)||(38787330-38787486)
chr1 (11-176)||(916999-917164)
chr1 (28-190)||(9379193-9379355)
chr1 (44-162)||(6160470-6160588)
chr1 (44-190)||(40144858-40145004)
chr1 (103-220)||(6785192-6785304)
chr1 (42-163)||(26257949-26258070)
chr1 (49-181)||(14757610-14757742)
chr1 (11-162)||(31978630-31978781)
chr1 (6-192)||(32825965-32826152)
chr1 (43-162)||(36701910-36702029)
chr1 (43-162)||(36718014-36718133)
chr1 (16-162)||(10495828-10495973)
chr1 (44-158)||(15699115-15699229)
chr1 (16-190)||(34031510-34031684)
chr1 (6-162)||(11449875-11450028)
chr1 (6-190)||(42409956-42410139)
chr1 (14-162)||(44761512-44761660)
chr1 (17-188)||(13579605-13579775)
chr1 (59-178)||(27896928-27897047)
chr1 (85-220)||(35367738-35367868)
chr1 (44-162)||(4441614-4441732)
chr1 (126-190)||(35682887-35682950)
chr1 (42-185)||(3260558-3260695)
chr1 (103-190)||(22856307-22856394)
chr1 (52-162)||(7351625-7351735)
chr1 (6-148)||(12151179-12151321)
chr1 (31-149)||(32970565-32970683)
chr1 (6-164)||(41080587-41080743)
chr1 (34-150)||(24880874-24880993)
chr1 (84-159)||(25089136-25089212)
chr1 (102-181)||(27721503-27721581)
chr1 (111-220)||(4659713-4659816)
chr1 (59-131)||(44426761-44426836)
chr1 (100-188)||(2137436-2137523)
chr1 (12-144)||(5179378-5179510)
chr1 (100-187)||(39887798-39887886)
chr1 (14-162)||(52429333-52429481)
chr1 (44-119)||(6365663-6365738)
chr1 (6-192)||(45331298-45331486)
chr1 (12-94)||(27687298-27687380)
chr1 (44-150)||(29074885-29074991)
chr1 (62-152)||(29778425-29778515)
chr1 (44-190)||(31154091-31154235)
chr1 (104-181)||(37539097-37539174)
chr1 (43-116)||(51028503-51028576)
chr1 (14-162)||(21909987-21910133)
chr1 (6-57)||(26252504-26252555)
chr1 (43-121)||(41121835-41121913)
chr1 (11-97)||(43500762-43500848)
chr1 (6-95)||(6267829-6267918)
chr1 (71-152)||(9412841-9412922)
chr1 (42-121)||(3312141-3312220)
chr1 (6-81)||(7439888-7439963)
chr1 (59-116)||(15057464-15057521)
chr1 (101-162)||(52837269-52837330)
chr1 (47-116)||(17988572-17988643)
chr1 (43-79)||(20564076-20564112)
chr1 (11-82)||(35367622-35367694)
chr1 (44-116)||(35538678-35538750)
[»] chr3 (65 HSPs)
chr3 (6-190)||(36460386-36460570)
chr3 (6-190)||(11632044-11632225)
chr3 (14-220)||(43253841-43254043)
chr3 (11-181)||(8679029-8679198)
chr3 (6-192)||(37695635-37695823)
chr3 (11-162)||(29023941-29024091)
chr3 (6-215)||(37311890-37312095)
chr3 (11-192)||(19822971-19823151)
chr3 (16-161)||(28690762-28690907)
chr3 (12-192)||(10366618-10366805)
chr3 (12-162)||(14194545-14194694)
chr3 (11-181)||(30190635-30190805)
chr3 (6-162)||(1778632-1778787)
chr3 (44-192)||(3901157-3901305)
chr3 (6-194)||(23004353-23004539)
chr3 (6-198)||(38137413-38137608)
chr3 (14-190)||(11905784-11905959)
chr3 (15-220)||(37772943-37773145)
chr3 (6-189)||(17652715-17652893)
chr3 (14-162)||(37497481-37497629)
chr3 (6-152)||(3313253-3313395)
chr3 (44-180)||(12904835-12904972)
chr3 (11-155)||(24569075-24569219)
chr3 (9-181)||(27471305-27471477)
chr3 (6-190)||(30711035-30711218)
chr3 (17-164)||(34750483-34750630)
chr3 (54-192)||(39043772-39043911)
chr3 (6-182)||(12736542-12736717)
chr3 (6-152)||(45710849-45710995)
chr3 (11-162)||(49830125-49830270)
chr3 (16-164)||(19611896-19612043)
chr3 (8-190)||(49447766-49447946)
chr3 (6-189)||(31158492-31158663)
chr3 (6-78)||(33491053-33491125)
chr3 (44-192)||(36476543-36476691)
chr3 (59-182)||(24245117-24245238)
chr3 (11-189)||(51837934-51838113)
chr3 (6-192)||(38795303-38795489)
chr3 (13-190)||(44301522-44301700)
chr3 (43-152)||(30682073-30682182)
chr3 (44-189)||(54726447-54726592)
chr3 (6-82)||(51064788-51064864)
chr3 (35-182)||(36462945-36463090)
chr3 (11-187)||(5322914-5323088)
chr3 (126-191)||(24703622-24703687)
chr3 (6-146)||(43719272-43719411)
chr3 (44-152)||(52290892-52291000)
chr3 (42-141)||(54477465-54477564)
chr3 (44-162)||(19609288-19609406)
chr3 (6-118)||(50035187-50035299)
chr3 (6-152)||(34957502-34957648)
chr3 (6-164)||(38512012-38512170)
chr3 (6-152)||(53560216-53560362)
chr3 (101-162)||(23068187-23068248)
chr3 (61-152)||(38705174-38705267)
chr3 (100-160)||(41351628-41351688)
chr3 (79-220)||(33491402-33491540)
chr3 (126-181)||(50036522-50036576)
chr3 (43-110)||(52206854-52206921)
chr3 (44-118)||(29595735-29595809)
chr3 (74-190)||(27549323-27549440)
chr3 (60-152)||(33459046-33459141)
chr3 (101-169)||(40194485-40194553)
chr3 (43-122)||(42278694-42278773)
chr3 (101-181)||(41038458-41038538)
[»] chr2 (51 HSPs)
chr2 (6-220)||(8947020-8947231)
chr2 (6-220)||(5789616-5789824)
chr2 (6-189)||(35313849-35314033)
chr2 (15-192)||(34120416-34120591)
chr2 (11-181)||(43115775-43115945)
chr2 (14-179)||(17695303-17695467)
chr2 (16-192)||(34225549-34225725)
chr2 (50-192)||(35242309-35242451)
chr2 (11-190)||(14523345-14523524)
chr2 (6-192)||(36354411-36354596)
chr2 (6-152)||(45235580-45235726)
chr2 (6-164)||(16377624-16377786)
chr2 (11-152)||(16805880-16806021)
chr2 (11-152)||(16845161-16845302)
chr2 (6-192)||(3323254-3323426)
chr2 (11-181)||(37322399-37322569)
chr2 (11-189)||(43410388-43410566)
chr2 (6-179)||(16463662-16463834)
chr2 (11-157)||(31448666-31448812)
chr2 (14-181)||(39691460-39691627)
chr2 (31-154)||(17346356-17346478)
chr2 (6-192)||(25637439-25637625)
chr2 (6-192)||(39785544-39785733)
chr2 (23-181)||(28170568-28170726)
chr2 (6-181)||(39329629-39329805)
chr2 (6-192)||(36794243-36794429)
chr2 (6-158)||(15359055-15359207)
chr2 (11-95)||(19937733-19937817)
chr2 (103-189)||(5272204-5272289)
chr2 (44-162)||(34451341-34451459)
chr2 (44-164)||(43699605-43699722)
chr2 (6-158)||(11742497-11742648)
chr2 (84-169)||(26863404-26863489)
chr2 (101-192)||(9458329-9458419)
chr2 (101-162)||(19937374-19937435)
chr2 (66-159)||(32831203-32831296)
chr2 (46-150)||(41220954-41221058)
chr2 (6-152)||(18853168-18853315)
chr2 (6-75)||(39443789-39443858)
chr2 (44-116)||(1206709-1206781)
chr2 (72-190)||(19444107-19444225)
chr2 (16-78)||(26607946-26608008)
chr2 (109-162)||(7494909-7494962)
chr2 (30-181)||(19426428-19426577)
chr2 (125-190)||(36173424-36173488)
chr2 (6-82)||(27501506-27501582)
chr2 (126-181)||(7438940-7438995)
chr2 (44-111)||(10005130-10005197)
chr2 (44-111)||(32783404-32783471)
chr2 (124-181)||(25904757-25904815)
chr2 (136-189)||(16028278-16028330)
[»] scaffold0159 (1 HSPs)
scaffold0159 (6-220)||(33989-34197)
[»] chr4 (81 HSPs)
chr4 (6-215)||(34360596-34360800)
chr4 (6-169)||(6643636-6643799)
chr4 (6-190)||(7061640-7061824)
chr4 (6-192)||(47464341-47464528)
chr4 (11-190)||(49428323-49428502)
chr4 (6-192)||(22130001-22130192)
chr4 (6-220)||(35311199-35311410)
chr4 (6-179)||(43237216-43237388)
chr4 (6-169)||(32884783-32884946)
chr4 (6-182)||(17237272-17237448)
chr4 (11-190)||(38405083-38405263)
chr4 (6-192)||(40122830-40123017)
chr4 (6-220)||(49746896-49747105)
chr4 (14-189)||(6609722-6609898)
chr4 (9-192)||(16821310-16821494)
chr4 (30-192)||(35380333-35380496)
chr4 (6-192)||(11907575-11907761)
chr4 (11-189)||(42616884-42617062)
chr4 (6-179)||(2942621-2942793)
chr4 (6-162)||(2066778-2066934)
chr4 (6-162)||(33790707-33790863)
chr4 (48-164)||(53412095-53412211)
chr4 (6-169)||(44536172-44536334)
chr4 (43-161)||(36985776-36985894)
chr4 (6-192)||(47772995-47773181)
chr4 (6-188)||(3689525-3689707)
chr4 (6-180)||(17114411-17114585)
chr4 (6-192)||(52859775-52859956)
chr4 (11-190)||(5841408-5841588)
chr4 (6-192)||(49175910-49176097)
chr4 (44-190)||(2653381-2653527)
chr4 (11-161)||(52247409-52247559)
chr4 (6-164)||(53346746-53346904)
chr4 (34-162)||(21240708-21240836)
chr4 (14-153)||(11288614-11288752)
chr4 (50-176)||(26147635-26147762)
chr4 (6-169)||(38663424-38663586)
chr4 (44-162)||(461947-462065)
chr4 (11-97)||(51625137-51625223)
chr4 (16-181)||(35998782-35998946)
chr4 (91-220)||(51624722-51624846)
chr4 (50-165)||(18741494-18741609)
chr4 (35-190)||(25233143-25233297)
chr4 (15-192)||(28500876-28501047)
chr4 (11-162)||(30682177-30682328)
chr4 (14-152)||(49579162-49579300)
chr4 (6-116)||(4972595-4972705)
chr4 (6-116)||(46396859-46396969)
chr4 (14-162)||(19265797-19265945)
chr4 (101-192)||(10754333-10754423)
chr4 (101-192)||(10968102-10968192)
chr4 (52-162)||(50264102-50264212)
chr4 (44-169)||(47358963-47359088)
chr4 (6-190)||(18532140-18532324)
chr4 (8-116)||(52869107-52869215)
chr4 (44-152)||(54506787-54506895)
chr4 (85-153)||(44526377-44526445)
chr4 (44-174)||(32469962-32470091)
chr4 (6-152)||(38502458-38502604)
chr4 (13-162)||(5618536-5618680)
chr4 (101-189)||(10672614-10672703)
chr4 (101-189)||(10886254-10886343)
chr4 (30-162)||(42517638-42517773)
chr4 (71-159)||(1038873-1038961)
chr4 (126-190)||(28911252-28911316)
chr4 (84-164)||(43902238-43902318)
chr4 (103-162)||(31370373-31370432)
chr4 (43-160)||(48914156-48914278)
chr4 (44-112)||(3098757-3098825)
chr4 (11-181)||(41711437-41711608)
chr4 (134-192)||(4972532-4972589)
chr4 (43-81)||(26885504-26885542)
chr4 (44-118)||(30192238-30192312)
chr4 (129-162)||(27880330-27880363)
chr4 (100-181)||(54202167-54202247)
chr4 (59-163)||(7986962-7987066)
chr4 (85-121)||(16506288-16506324)
chr4 (38-189)||(17512347-17512499)
chr4 (134-190)||(19627114-19627169)
chr4 (42-82)||(31257518-31257558)
chr4 (114-162)||(35251888-35251936)
[»] chr6 (44 HSPs)
chr6 (6-190)||(181517-181700)
chr6 (6-164)||(3720210-3720368)
chr6 (6-182)||(3291737-3291913)
chr6 (6-190)||(31894179-31894361)
chr6 (6-188)||(15058081-15058262)
chr6 (17-190)||(13909384-13909558)
chr6 (6-179)||(29363279-29363451)
chr6 (12-190)||(11655921-11656100)
chr6 (6-190)||(32440614-32440798)
chr6 (14-164)||(1781791-1781939)
chr6 (31-152)||(13087529-13087650)
chr6 (19-148)||(21804511-21804639)
chr6 (28-162)||(1225037-1225170)
chr6 (6-220)||(23142604-23142812)
chr6 (15-164)||(7920226-7920374)
chr6 (43-164)||(24983455-24983576)
chr6 (84-169)||(34657609-34657694)
chr6 (17-179)||(6834349-6834510)
chr6 (44-181)||(5302321-5302458)
chr6 (43-152)||(17828939-17829048)
chr6 (6-161)||(1063572-1063727)
chr6 (44-190)||(6801891-6802038)
chr6 (6-192)||(30716858-30717045)
chr6 (48-190)||(1955990-1956132)
chr6 (6-162)||(21010162-21010322)
chr6 (14-112)||(27448133-27448231)
chr6 (45-190)||(15582246-15582389)
chr6 (54-190)||(34299955-34300092)
chr6 (72-192)||(11143622-11143741)
chr6 (44-192)||(17835345-17835491)
chr6 (72-166)||(10923413-10923507)
chr6 (72-162)||(33510129-33510218)
chr6 (103-164)||(15046111-15046171)
chr6 (28-97)||(27367427-27367496)
chr6 (28-97)||(27457774-27457843)
chr6 (84-152)||(16205206-16205273)
chr6 (31-185)||(21018723-21018879)
chr6 (72-119)||(8695077-8695124)
chr6 (126-190)||(21425646-21425712)
chr6 (59-121)||(23397643-23397705)
chr6 (136-215)||(27367524-27367600)
chr6 (136-215)||(27457871-27457947)
chr6 (101-153)||(22398411-22398463)
chr6 (126-162)||(31283490-31283526)
[»] chr5 (46 HSPs)
chr5 (6-192)||(31655012-31655198)
chr5 (6-220)||(41496016-41496225)
chr5 (6-181)||(4818520-4818696)
chr5 (6-220)||(8698244-8698454)
chr5 (8-192)||(15818450-15818636)
chr5 (6-220)||(40530192-40530402)
chr5 (6-164)||(29570379-29570537)
chr5 (11-192)||(6753632-6753812)
chr5 (16-162)||(8724987-8725133)
chr5 (28-220)||(6615870-6616057)
chr5 (16-162)||(42803598-42803744)
chr5 (44-181)||(4440991-4441128)
chr5 (6-162)||(21060619-21060775)
chr5 (11-179)||(2232046-2232210)
chr5 (6-181)||(40899888-40900063)
chr5 (6-164)||(22848352-22848510)
chr5 (13-162)||(27542784-27542933)
chr5 (14-190)||(7827902-7828078)
chr5 (28-192)||(19929905-19930069)
chr5 (11-192)||(6315750-6315931)
chr5 (44-192)||(6753988-6754135)
chr5 (11-161)||(30512658-30512809)
chr5 (11-161)||(30552998-30553149)
chr5 (17-162)||(27580589-27580735)
chr5 (6-164)||(29374329-29374487)
chr5 (6-179)||(9515708-9515891)
chr5 (11-190)||(1248577-1248756)
chr5 (44-190)||(37184085-37184229)
chr5 (72-192)||(41062194-41062313)
chr5 (43-189)||(15439324-15439469)
chr5 (44-153)||(18841477-18841586)
chr5 (44-176)||(11796173-11796305)
chr5 (126-190)||(41478744-41478810)
chr5 (126-179)||(41480124-41480176)
chr5 (6-163)||(41478815-41478972)
chr5 (6-163)||(41492290-41492447)
chr5 (84-192)||(3348176-3348284)
chr5 (6-118)||(32440174-32440286)
chr5 (11-164)||(11904192-11904346)
chr5 (126-163)||(41492248-41492285)
chr5 (126-192)||(10598228-10598294)
chr5 (44-158)||(26285484-26285598)
chr5 (6-82)||(2588036-2588112)
chr5 (107-182)||(37101274-37101347)
chr5 (85-141)||(38161459-38161515)
chr5 (6-82)||(38508155-38508231)
[»] chr7 (64 HSPs)
chr7 (6-192)||(22738668-22738853)
chr7 (6-192)||(34947466-34947652)
chr7 (6-220)||(21350605-21350812)
chr7 (6-190)||(11373405-11373589)
chr7 (6-192)||(2459437-2459621)
chr7 (6-215)||(34100524-34100728)
chr7 (18-190)||(41506054-41506226)
chr7 (6-190)||(8592417-8592601)
chr7 (10-190)||(24516270-24516450)
chr7 (6-192)||(759068-759254)
chr7 (10-192)||(19271714-19271895)
chr7 (6-179)||(28103712-28103885)
chr7 (6-169)||(5524366-5524532)
chr7 (6-220)||(7463155-7463365)
chr7 (14-162)||(38391744-38391892)
chr7 (6-188)||(46478270-46478453)
chr7 (6-190)||(7457398-7457581)
chr7 (6-192)||(83350-83537)
chr7 (9-118)||(12631345-12631454)
chr7 (12-192)||(21390260-21390441)
chr7 (6-192)||(40076284-40076467)
chr7 (11-183)||(3178186-3178358)
chr7 (6-162)||(9785984-9786140)
chr7 (48-220)||(37245633-37245799)
chr7 (6-181)||(28202286-28202461)
chr7 (6-181)||(29835391-29835565)
chr7 (15-162)||(30865963-30866110)
chr7 (11-164)||(26974020-26974176)
chr7 (6-179)||(16904359-16904531)
chr7 (31-220)||(33819155-33819341)
chr7 (11-190)||(21759966-21760145)
chr7 (11-190)||(43873891-43874070)
chr7 (6-163)||(23670481-23670637)
chr7 (11-189)||(48608836-48609009)
chr7 (6-181)||(32018689-32018865)
chr7 (6-189)||(42935627-42935813)
chr7 (85-192)||(25571386-25571492)
chr7 (71-162)||(6494976-6495067)
chr7 (43-181)||(32018929-32019068)
chr7 (6-152)||(13961965-13962111)
chr7 (11-181)||(32346034-32346204)
chr7 (6-138)||(16560547-16560679)
chr7 (6-138)||(16604983-16605115)
chr7 (11-152)||(31930479-31930622)
chr7 (11-162)||(17828334-17828483)
chr7 (6-95)||(44180268-44180357)
chr7 (44-152)||(27920994-27921102)
chr7 (41-150)||(35333051-35333160)
chr7 (101-190)||(44424113-44424201)
chr7 (6-114)||(46211472-46211583)
chr7 (84-164)||(17610896-17610976)
chr7 (102-162)||(49101659-49101719)
chr7 (11-95)||(2850863-2850947)
chr7 (6-162)||(19060378-19060529)
chr7 (101-179)||(36790720-36790797)
chr7 (36-121)||(17783098-17783183)
chr7 (87-159)||(30546413-30546485)
chr7 (141-192)||(29835567-29835618)
chr7 (100-158)||(45724978-45725036)
chr7 (71-215)||(24166938-24167078)
chr7 (44-152)||(31665731-31665840)
chr7 (111-192)||(37490341-37490422)
chr7 (6-79)||(44424214-44424287)
chr7 (104-169)||(47045546-47045611)
[»] chr8 (59 HSPs)
chr8 (12-215)||(21216078-21216275)
chr8 (34-181)||(7172884-7173031)
chr8 (6-192)||(17719229-17719415)
chr8 (6-181)||(11976907-11977082)
chr8 (5-192)||(34948657-34948842)
chr8 (6-220)||(39482548-39482760)
chr8 (6-220)||(45425637-45425847)
chr8 (11-192)||(10179923-10180104)
chr8 (6-190)||(39405723-39405907)
chr8 (43-178)||(44761502-44761637)
chr8 (6-162)||(31082608-31082764)
chr8 (14-192)||(13335176-13335353)
chr8 (7-119)||(1875564-1875676)
chr8 (16-220)||(9300094-9300295)
chr8 (18-159)||(27294042-27294183)
chr8 (11-181)||(43719211-43719382)
chr8 (11-190)||(26626088-26626267)
chr8 (11-189)||(31270985-31271161)
chr8 (14-192)||(22771814-22771992)
chr8 (47-161)||(42886990-42887104)
chr8 (43-140)||(31331419-31331516)
chr8 (6-154)||(10097962-10098110)
chr8 (6-132)||(51132-51257)
chr8 (14-152)||(40996344-40996482)
chr8 (44-169)||(4428360-4428485)
chr8 (6-152)||(34393925-34394075)
chr8 (44-189)||(14854943-14855090)
chr8 (28-192)||(31231689-31231853)
chr8 (44-148)||(34057627-34057731)
chr8 (43-162)||(5053161-5053280)
chr8 (43-192)||(396619-396768)
chr8 (50-190)||(17823883-17824022)
chr8 (12-160)||(32476278-32476426)
chr8 (44-181)||(40028482-40028623)
chr8 (28-96)||(40109789-40109857)
chr8 (17-149)||(42972490-42972625)
chr8 (62-192)||(4924094-4924225)
chr8 (85-152)||(32678402-32678469)
chr8 (6-97)||(36967415-36967506)
chr8 (43-149)||(5356602-5356707)
chr8 (6-184)||(35504843-35505019)
chr8 (31-164)||(41091982-41092114)
chr8 (6-82)||(1739709-1739785)
chr8 (11-95)||(7703132-7703216)
chr8 (49-152)||(36006901-36007004)
chr8 (84-162)||(29226577-29226655)
chr8 (59-121)||(44648556-44648618)
chr8 (28-121)||(2767284-2767377)
chr8 (6-95)||(39300912-39301001)
chr8 (32-109)||(39890663-39890740)
chr8 (6-86)||(6611762-6611842)
chr8 (6-82)||(32678787-32678863)
chr8 (42-109)||(12559635-12559702)
chr8 (17-148)||(33765663-33765794)
chr8 (101-180)||(39301022-39301101)
chr8 (43-184)||(5878997-5879139)
chr8 (101-190)||(32631376-32631464)
chr8 (135-215)||(1875839-1875914)
chr8 (6-118)||(9839797-9839909)
[»] scaffold0095 (1 HSPs)
scaffold0095 (6-190)||(50165-50349)
[»] scaffold0018 (1 HSPs)
scaffold0018 (6-169)||(136007-136170)
[»] scaffold1809 (1 HSPs)
scaffold1809 (49-220)||(697-862)
[»] scaffold0294 (1 HSPs)
scaffold0294 (6-169)||(17017-17180)
[»] scaffold0583 (1 HSPs)
scaffold0583 (12-162)||(2014-2164)
[»] scaffold0302 (1 HSPs)
scaffold0302 (6-152)||(16097-16243)
[»] scaffold0328 (1 HSPs)
scaffold0328 (6-192)||(7951-8138)
[»] scaffold0330 (1 HSPs)
scaffold0330 (14-159)||(5382-5527)
[»] scaffold0012 (1 HSPs)
scaffold0012 (15-162)||(105673-105820)
[»] scaffold0110 (1 HSPs)
scaffold0110 (6-162)||(1693-1849)
[»] scaffold0182 (1 HSPs)
scaffold0182 (44-162)||(20361-20479)
[»] scaffold0003 (3 HSPs)
scaffold0003 (14-112)||(39127-39225)
scaffold0003 (85-192)||(252854-252959)
scaffold0003 (11-82)||(252504-252575)
[»] scaffold0016 (1 HSPs)
scaffold0016 (126-190)||(76253-76317)
[»] scaffold1391 (1 HSPs)
scaffold1391 (17-116)||(1798-1897)
[»] scaffold0188 (1 HSPs)
scaffold0188 (43-148)||(6741-6845)
[»] scaffold0068 (1 HSPs)
scaffold0068 (104-153)||(56659-56708)
[»] scaffold0011 (1 HSPs)
scaffold0011 (44-164)||(14178-14296)
[»] scaffold0470 (1 HSPs)
scaffold0470 (6-86)||(1050-1130)
[»] scaffold0015 (1 HSPs)
scaffold0015 (43-159)||(42869-42985)
[»] scaffold0464 (1 HSPs)
scaffold0464 (11-82)||(6260-6331)
[»] scaffold0238 (1 HSPs)
scaffold0238 (11-74)||(3687-3750)


Alignment Details
Target: chr1 (Bit Score: 153; Significance: 3e-81; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 44707733 - 44707917
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||| |||||||    
T  44707733 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattatattgatttcaatgataaaattagtagtatttactaaaacacatttatt 44707832  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44707833 aattgtagttagtgaagcagttaagttggatgaaattcaataaataaaggtataatagtggaaacaaataataaatattgcattg 44707917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 39864251 - 39864047
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| |   ||||||||||    
T  39864251 tagtcgtttaaagtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaatactcttattaattg 39864152  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaagtgac 210  Q
    |||||||||||  | ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||| |||||||| |     |||||||||||||    
T  39864151 tagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaataataaatgttgcattgat-----attgtaaagtgac 39864057  T
Q  211 aattactttg 220  Q
    ||||| ||||    
T  39864056 aattattttg 39864047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 24991626 - 24991836
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| | |||||||||||  ||||||||||||||| ||||||||||  ||||||||| |||||||||||| ||||  ||||||    
T  24991626 aatattagtcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattaatagtatttactacaacacctttatt 24991725  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt-tgaaacaaataataaatattgcattggtgttgcattgtaa 204  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| ||||||| ||     |||||||    
T  24991726 aattgtagttagtggaatagttaagttggatgaaattcaataaataaaggtataatagtgggaaaaaaataataaatgttgcattagt-----attgtaa 24991820  T
Q  205 agtgacaattactttg 220  Q
    ||||||||||| ||||    
T  24991821 agtgacaattattttg 24991836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 12039227 - 12039018
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||  ||||||||| |||   |||||    
T  12039227 aatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaatacactcttatt 12039128  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaa 205  Q
    ||||||||||| ||||  | |||||||||||| |||||||||||||| ||||||||||| ||||  |||||||||| ||||||| ||     ||||||||    
T  12039127 aattgtagttaatggagtatttaagttggatgtaattcaataaataagggtataatagtggaaaataataataaatgttgcattagt-----attgtaaa 12039033  T
Q  206 gtgacaattactttg 220  Q
    |||||||||| ||||    
T  12039032 gtgacaattattttg 12039018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 182
Target Start/End: Complemental strand, 9307772 - 9307595
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| | |||||||||||  ||||||||||| ||| |||||||||||  |||||||| ||| |||||||||||||   || ||    
T  9307772 aatattagtcgtttaaggtttgtacacgattattaaggaaatgattaactgtgttgatttcaatgataaaattaatagcatttactaaaacacccttgtt 9307673  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt-tgaaacaaataataaata 182  Q
    ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||    
T  9307672 aattgtagttagtggagtagttaagttggatgaaattcaataaataaaggtataatagtgggaaaaaaataataaata 9307595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 23168966 - 23169173
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||||||||||||||| |||||||||||||   |||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||  |||||    
T  23168966 aatattagtcgtttaaagtttgtgcacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacatccttatt 23169065  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaa 205  Q
    |||| ||||||||  || | ||||||  | |||||||||||||||||  |||||||||| |||  || |||||||| ||||||||||     ||||||||    
T  23169066 aattatagttagttaaatagttaagtgaggtgaaattcaataaataagagtataatagtggaa--aagtaataaatgttgcattggt-----attgtaaa 23169158  T
Q  206 gtgacaattactttg 220  Q
    |||||||||| ||||    
T  23169159 gtgacaattattttg 23169173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 2572608 - 2572429
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||||||||||||| || |||||||||| |  ||||||||||||||||||||||||| ||||||||| ||  ||||||| ||| | | ||||||||||    
T  2572608 tagtcgtttaaagtttgtgtacgattattaaaataatgattaattgtattgatttcaatggtaaaattaatatcatttact-aaatacaattattaattg 2572510  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaat-aataaatattgcattg 190  Q
    |||||||||||  | |||||||| |||||||||||||||||||  ||||||| | |||| |||| ||||||||||||||||    
T  2572509 tagttagtggagtagttaagttgaatgaaattcaataaataaaaatataataatggaaaaaaataaataaatattgcattg 2572429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 28749136 - 28748952
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||| ||| |||||  ||| |||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||   |||||    
T  28749136 aatatttgtcatttaagatttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttatt 28749037  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||| ||||| |||   |||||||||||||||||  |||||||| ||||||||||| | || |||||||||||  |||||||    
T  28749036 aattgtaattagtagaattgttaagttggatgaaattttataaataagggtataatagtgggaaaaaataataaatgctgcattg 28748952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 44 - 190
Target Start/End: Original strand, 8896343 - 8896490
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||| ||||| ||||||||||| ||||||||| ||  ||||||||||| |||||||||||||||||||||||||    ||||||||||||||||||    
T  8896343 aaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaatatatttattaattgtagttagtggagtggttaagttggatgaaattc 8896442  T
Q  144 aataaataaaggtataat-agttgaaacaaataataaatattgcattg 190  Q
    |||||||||||||||||| |   |||| ||||||||||| ||||||||    
T  8896443 aataaataaaggtataatcatgggaaaaaaataataaatgttgcattg 8896490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 181
Target Start/End: Complemental strand, 31042942 - 31042767
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||| ||||| |||| |||| ||||||||  ||||||||||||||| ||||||||||| ||||||||||||  |||||||  || |   |||||    
T  31042942 aatattagtcatttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactgtaatacccttatt 31042843  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    |||||||| ||||| |  |||||||||| |||||||||||||||||||| ||| ||||| |||| |||||||||||    
T  31042842 aattgtaggtagtgaagtaattaagttgaatgaaattcaataaataaagatatcatagtggaaaaaaataataaat 31042767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 176
Target Start/End: Original strand, 6023622 - 6023792
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| ||| |||||||||  |||||| |||||||| ||||||||||| ||||| |||||||  |||||||||| |  ||||||    
T  6023622 aatattagtcgtttaatgtttgtgcgcgattattacggaaatgtttaattgtgttgatttcaatggtaaatttagtagcttttactaaaatacctttatt 6023721  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataa 176  Q
    ||||||||||| ||||  | |||||||||||||||||||||| || |  |||||||||| |||| ||||||    
T  6023722 aattgtagttattggagtagttaagttggatgaaattcaatacatgagagtataatagtggaaaaaaataa 6023792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 7759338 - 7759185
Alignment:
Q  28 tgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaatt 127  Q
    ||||||||||||| | |||| ||||||||| ||||||||||| || |||||| ||  ||||||||||| |   |||||||||||||||||||||| | ||    
T  7759338 tgcacgattattaaaaaaataattaattgtgttgatttcaatggtgaaattaatatcatttactaaaatactcttattaattgtagttagtggaatagtt 7759239  T
Q  128 aagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    |||||| |||||||||||||||||| ||||||||| | |||| |||||||||||    
T  7759238 aagttgaatgaaattcaataaataagggtataataatggaaaaaaataataaat 7759185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 30754919 - 30755070
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||||||||  ||| |||||||||||||  ||||||||||||||| ||||||| ||  ||||||||  || |||||||||||| ||  |||||||||     
T  30754919 tagtcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgattttaagggtaaaatttatattatttactaaaatatcattattaatta 30755018  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||| || | ||||||| |||||||||||||||||||||||||||||    
T  30755019 tagttagtgaaatagttaagttagatgaaattcaataaataaaggtataata 30755070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 16395025 - 16395193
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||| |||||||||||||   |||||||||||||| |||||||  |||||||||||||||  ||||||||||| |  ||| |||||||    
T  16395025 tagtcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatagtaaaattagtatcatttactaaaataccttt-ttaattg 16395123  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    |||||||||||  | ||||||| ||||||||||||||||||| | |||||||  ||||| |||||||||||    
T  16395124 tagttagtggagtagttaagttagatgaaattcaataaataatgatataata-atgaaaaaaataataaat 16395193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 20209813 - 20209999
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||||| |  |||||  ||||||   |||||||||||| | |||||||  |||||||||||||||  ||||||||||||||  |||||    
T  20209813 aataatagtcgtttaaaggtgatgcaccgttattaagaaaatgattaattatgttgattttgatagtaaaattagtatcatttactaaaacatccttatt 20209912  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||||||||  | |||||||||||||| |||||||||||| ||||| ||| | | || |||||||||||  |||||||||    
T  20209913 aattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaaaataataaatgctgcattggt 20209999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 37506264 - 37506085
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtat---ttactaaaacatatttattaattg 110  Q
    |||||||| |||  |||||| ||||||  ||||||||||||||| |||||||  ||  ||||||||||| |||   |||||||||||  |||||||||||    
T  37506264 tcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatgataaaattagtactatcatttactaaaacacttttattaattg 37506165  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||||||||||  | |||||||| |||||||||||||||||| ||||| ||| | |||| ||||||||||| ||||||||    
T  37506164 tagttagtggagtagttaagttgaatgaaattcaataaataagggtattataatggaaaaaaataataaatgttgcattg 37506085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 26093532 - 26093364
Alignment:
Q  13 gtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgta 112  Q
    |||||||||  ||| |||||||||||||   |||||||||||||| ||||||||||| ||||||||| ||  ||||| ||||| ||  ||||||||||||    
T  26093532 gtcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatatcatttattaaaatatccttattaattgta 26093433  T
Q  113 gttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||||| |  ||||||||| |||||| |||||||||||| ||||||||| | |||| | |||||||||    
T  26093432 gttagtgaagtaattaagttagatgaagttcaataaataagggtataataatggaaaaatataataaat 26093364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 33733241 - 33733410
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||||||||||||| |||||||||||||  |||||||||| |||| ||||||||||| ||||||||| ||  ||||||||||| |  |||||||||||    
T  33733241 tagtcgtttaaagtttgtgcacgattattaaggaaatgatta-ttgtgttgatttcaatggtaaaattattaacatttactaaaatacttttattaattg 33733339  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    |||||||| ||    ||| || | |||||||||||||||||| ||||||||| | ||||  ||||||||||    
T  33733340 tagttagtagagtggttaggtagaatgaaattcaataaataagggtataataatggaaaagaataataaat 33733410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 37276584 - 37276450
Alignment:
Q  28 tgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaatt 127  Q
    |||||||||||||  ||||||||||| ||| |||||||  || ||||||||||||   ||||||||||||   |||||||||||||||||||||| | ||    
T  37276584 tgcacgattattaaggaaatgattaactgtgttgattttgatggtaaaattagtatcgtttactaaaacacccttattaattgtagttagtggaatagtt 37276485  T
Q  128 aagttggatgaaattcaataaataaaggtataata 162  Q
    || |||||||||||||||||||||| |||||||||    
T  37276484 aaattggatgaaattcaataaataagggtataata 37276450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 49223997 - 49224142
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||||| |||||||  || ||||||||||||  |||||||||||||   |||||||||||||||||||||  | |||||||||||||| |||    
T  49223997 aaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaagttc 49224096  T
Q  144 aataaataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
    ||||||||| ||||| ||| |  ||| ||||||||||| |||||||    
T  49224097 aataaataagggtattataatgaaaaaaaataataaatgttgcatt 49224142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 38787486 - 38787330
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| |||||||||||||  ||||||||| ||||| |||||||  || |||||| |||||  |||| | |||||||  |||||    
T  38787486 aataatagtcgtttaaggtttatgcacgattattaaggaaatgattgattgtgttgattttgatggtaaaactagtatcatttgccaaaacatccttatt 38787387  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||| |||||||||||  | |||| |||||||||||||||||||||| |||||||||    
T  38787386 aattatagttagtggagtagttaaattggatgaaattcaataaataagggtataata 38787330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 917164 - 916999
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||| ||||||||||||| | |||||||||||| | ||||||| ||| ||||||||| ||  ||||||||||| |   ||||||||||    
T  917164 tagtcgtttaaggtttgtgcacgattattaaataaatgattaattatgttgatttaaatggtaaaattaatatcatttactaaaatacccttattaattg 917065  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataa 176  Q
    |||||||| ||  | |||||||| |||||||| ||||||||| |||| |||| | |||| ||||||    
T  917064 tagttagtagattagttaagttgcatgaaatttaataaataagggtaaaataatggaaaaaaataa 916999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 9379355 - 9379193
Alignment:
Q  28 tgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagt-ggaacaat 126  Q
    ||||| ||| ||| ||||||||||||||||| |||||| |||  |||||||| ||  ||||| ||||| |||||||||||||||||||||| |||  | |    
T  9379355 tgcacaatttttaaagaaatgattaattgtaatgattttaatgataaaattaatatcatttattaaaatatatttattaattgtagttagtgggagtagt 9379256  T
Q  127 taagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||||| ||||||||| |||||||| |||||||||| | |||| ||  ||||||||||||||||    
T  9379255 taagtttgatgaaatttaataaatataggtataataatggaaa-aataaataaatattgcattg 9379193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 6160470 - 6160588
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||||| |||||||||||  ||||||||||| |||||||||||| |   |||||||||||||||| ||||| | |||||||| ||| |||||    
T  6160470 aaatgattaattgtgttgatttcaatgataaaattagtattatttactaaaatactcttattaattgtagttaatggaatagttaagttgaatgtaattc 6160569  T
Q  144 aataaataaaggtataata 162  Q
    |||||| || |||||||||    
T  6160570 aataaacaagggtataata 6160588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 190
Target Start/End: Original strand, 40144858 - 40145004
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||||| |||||||  || ||||||||| ||  |||||||||||||   |||||||||||||||| ||||  | |||||||||||||| |||    
T  40144858 aaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtagttaatggagtagttaagttggatgaagttc 40144957  T
Q  144 aataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||| ||||| ||| | | || ||||||||||| ||||||||    
T  40144958 aataaataagggtattataatgggaaaaaataataaatgttgcattg 40145004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 220
Target Start/End: Complemental strand, 6785304 - 6785192
Alignment:
Q  103 attaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgt 202  Q
    |||||||||||||||||||  | ||||||| ||||||||||||||||||| ||||||||||| |||| ||||||||||| |||||| |||     |||||    
T  6785304 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagggtataatagtggaaaaaaataataaatgttgcataggt-----attgt 6785210  T
Q  203 aaagtgacaattactttg 220  Q
    ||||||||||||| ||||    
T  6785209 aaagtgacaattattttg 6785192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 163
Target Start/End: Original strand, 26257949 - 26258070
Alignment:
Q  42 agaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaat 141  Q
    |||||||||||||||||||||||||||||| ||||| | ||  ||||||||||| |  ||||||||| || |||||| ||| |||||||||||||||||     
T  26257949 agaaatgattaattgtattgatttcaatagcaaaatgattatcatttactaaaatacctttattaatcgtggttagtagaataattaagttggatgaaaa 26258048  T
Q  142 tcaataaataaaggtataatag 163  Q
     || ||||||| ||||||||||    
T  26258049 ccagtaaataagggtataatag 26258070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 49 - 181
Target Start/End: Original strand, 14757610 - 14757742
Alignment:
Q  49 attaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataa 148  Q
    ||||||||| ||||||||||   |||||||||||  |||||||||||||   ||||||||||||||||||| |  | ||||||| ||||||||| |||||    
T  14757610 attaattgtgttgatttcaacgataaaattagtaacatttactaaaacactcttattaattgtagttagtgaagtagttaagttcgatgaaatttaataa 14757709  T
Q  149 ataaaggtataatagttgaaacaaataataaat 181  Q
    |||| ||||||||||| |||| |||| ||||||    
T  14757710 ataagggtataatagtggaaaaaaattataaat 14757742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 31978630 - 31978781
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||||||||||||| |||||||||||||   ||| |||||||||| ||||||||||| ||||||||| ||  | ||||||||  ||  |||||||||     
T  31978630 tagtcgtttaaagtttgtgcacgattattaagaaaaagattaattgtgttgatttcaatggtaaaattaatatcacttactaaactattcttattaatta 31978729  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||| ||||  | |||||||| || ||||||| ||||||| |||||||||    
T  31978730 tagttaatggagtagttaagttgaattaaattcattaaataagggtataata 31978781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 32825965 - 32826152
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||  |||||| ||||||  |||||||||||| || |||||||  || ||||||||||||  |||||||||||||  ||||||    
T  32825965 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaat-gtgttgattttgatggtaaaattagtatcatttactaaaacacctttatt 32826063  T
Q  106 aattgtagttagt---ggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||| |||||   |||  | |||||||||||||| |||||||||||| ||||| ||| | |||| ||||||||||| ||| ||||||    
T  32826064 aattgtaattagtggaggagtagttaagttggatgaagttcaataaataagggtattataatggaaa-aaataataaatgttgtattggt 32826152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 36702029 - 36701910
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    ||||||||||||| | ||||||||||| ||||||||||||  |||||||||||     ||||||||||||||||||||||   ||||||| |||||||||    
T  36702029 gaaatgattaattatgttgatttcaatggtaaaattagtatcatttactaaaatgcccttattaattgtagttagtggaatcgttaagtttgatgaaatt 36701930  T
Q  143 caataaataaaggtataata 162  Q
    ||||||||||  ||||||||    
T  36701929 caataaataagagtataata 36701910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 36718133 - 36718014
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    ||||||||||||| | ||||||||||| ||||||||||||  |||||||||||     ||||||||||||||||||||||   ||||||| |||||||||    
T  36718133 gaaatgattaattatgttgatttcaatggtaaaattagtatcatttactaaaatgcccttattaattgtagttagtggaatcgttaagtttgatgaaatt 36718034  T
Q  143 caataaataaaggtataata 162  Q
    ||||||||||  ||||||||    
T  36718033 caataaataagagtataata 36718014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 10495973 - 10495828
Alignment:
Q  16 gtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtt 115  Q
    |||||| |||| || | |||||||| | |||| ||||||| | |||||||  || ||||||||||||  |||||||||||||  ||||||||||||| ||    
T  10495973 gtttaaggtttatgtaagattattaaaaaaattattaattttgttgattttgatggtaaaattagtatcatttactaaaacac-tttattaattgtaatt 10495875  T
Q  116 agtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||  | ||||||||||||||||||||||||||||  |||||||    
T  10495874 agtggagtagttaagttggatgaaattcaataaataaatatataata 10495828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 158
Target Start/End: Complemental strand, 15699229 - 15699115
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||||| |||||||  || ||||||||| ||  |||||||||||||   |||||||||||||||||||||  | |||||||||||||| |||    
T  15699229 aaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaagttc 15699130  T
Q  144 aataaataaaggtat 158  Q
    ||||||||| |||||    
T  15699129 aataaataagggtat 15699115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 34031510 - 34031684
Alignment:
Q  16 gtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtt 115  Q
    |||||| |||| |||| ||||||||  |||||||||| |||| |||||| |||| ||||||||| ||  ||||||||||| |   |||||||||||||||    
T  34031510 gtttaaggtttgtgcatgattattaaggaaatgattacttgtgttgattccaatggtaaaattaatatcatttactaaaataccgttattaattgtagtt 34031609  T
Q  116 agtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||| || | | | |||| ||||||||||||||||||  |||||||| | |||| | |||||||||  |||||||    
T  34031610 agtgtaatagtaaggttgaatgaaattcaataaataagagtataataatggaaaaacataataaatgctgcattg 34031684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 11450028 - 11449875
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||| |||||| |||| |||||||||||||  |||||| |||||| | ||||||||||| ||||||||| ||  |||| ||| |||| |||||||    
T  11450028 aataatagttgtttaaggtttgtgcacgattattaaggaaatggttaattatgttgatttcaatggtaaaattaata--attttctataacacatttatt 11449931  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||||| | ||  | | || |||||||||||||||||||| |||||||||||    
T  11449930 aattgtagttaatagagtagtaaaattggatgaaattcaataaat-aaggtataata 11449875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 42410139 - 42409956
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||| |||||| |||  |||||| |||||| | |||||||||||||| |||||||  || ||||||||| ||  |||||||||| ||   |||||    
T  42410139 aataatagttgtttaaggttgatgcacggttattaaaaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaagcacccttatt 42410040  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||||||| | | | |||||| ||||||| |||||||||||||| ||| |||  ||||| |||||||||||  |||||||    
T  42410039 aattgtagttagttggatagttaagtaggatgaagttcaataaataaagatattata-atgaaaaaaataataaatgctgcattg 42409956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 44761512 - 44761660
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    ||||||| ||||| || | ||||| || | |||||||||||| | || |||| |||  |||||||| ||  ||||||||||| || |||||||||| |||    
T  44761512 tcgtttagagtttgtgtatgattaataaaaaaatgattaattatgttaattttaatgataaaattaatatcatttactaaaatatctttattaattatag 44761611  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||||||   |||||||| |||||||||||||||||| |||||||||    
T  44761612 ttagtggaatggttaagttgaatgaaattcaataaataagggtataata 44761660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 13579605 - 13579775
Alignment:
Q  17 tttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtta 116  Q
    ||||| |||| |||| |||||||| |||||||||||||||| |||||||  ||   || |||| ||  |||||| ||||||    |||||||||||||||    
T  13579605 tttaaggtttatgcatgattattaaagaaatgattaattgtgttgattttgatgacaatattaatatcatttacaaaaacacccatattaattgtagtta 13579704  T
Q  117 gtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcat 188  Q
    |||||  | ||||||| ||||||||||||||||||| |||||||||  | |||  |||||||||||||||||    
T  13579705 gtggagtatttaagtttgatgaaattcaataaataagggtataata-ataaaaataataataaatattgcat 13579775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 178
Target Start/End: Complemental strand, 27897047 - 27896928
Alignment:
Q  59 ttgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtat 158  Q
    ||||||| |||  |||||||||||  |||||  |||| ||  ||||||||| |||||||||||  |||| |||||||||||||| |||||||||||||||    
T  27897047 ttgattttaatgataaaattagtataatttatcaaaatattcttattaattatagttagtggagtaatttagttggatgaaatttaataaataaaggtat 27896948  T
Q  159 aatagttgaaacaaataata 178  Q
    |||||| |||| ||||||||    
T  27896947 aatagtcgaaaaaaataata 27896928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 220
Target Start/End: Complemental strand, 35367868 - 35367738
Alignment:
Q  85 atttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatatt 184  Q
    |||||||||||||   |||||||||||||||||||||  | ||||||| ||||||||||||||||||| |||||||||||  |||  | |||||||| ||    
T  35367868 atttactaaaacacccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataatagtgaaaaagactaataaatgtt 35367769  T
Q  185 gcattggtgttgcattgtaaagtgacaattactttg 220  Q
     |||||||     |||||||||||||||||| ||||    
T  35367768 tcattggt-----attgtaaagtgacaattattttg 35367738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 4441614 - 4441732
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||| |||||||||  |||||| ||| ||||||||| | || ||||||||||||   || ||||||||||||||||||  |||||| || |||||||||     
T  4441614 aaataattaattgtggtgattttaatggtaaaattaatcgtctttactaaaacacccttgttaattgtagttagtggagtaattaaattagatgaaattt 4441713  T
Q  144 aataaataaaggtataata 162  Q
    |||||||||||||||||||    
T  4441714 aataaataaaggtataata 4441732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 35682887 - 35682950
Alignment:
Q  126 ttaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  35682887 ttaagttggatgaaattcaataaataagggtataatagtggaaa-aaataataaatattgcattg 35682950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 3260695 - 3260558
Alignment:
Q  42 agaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaat 141  Q
    ||||||||||| |||| |||||||||||| ||||| ||||| || |||||||       |||||||||||||||||||||  | ||||||| ||||||||    
T  3260695 agaaatgattagttgtgttgatttcaataataaaagtagtattaattactaacc-----ttattaattgtagttagtggagaagttaagtttgatgaaat 3260601  T
Q  142 tcaataaataaaggtataatagttgaaacaaataataaatattg 185  Q
    | |||||||||   ||||||||| | ||||||||||||||||||    
T  3260600 tgaataaataagtttataatagtag-aacaaataataaatattg 3260558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 22856307 - 22856394
Alignment:
Q  103 attaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||||||||||||||||||  | ||||| |||||||||||||||||||||| ||||||||||  ||| ||||||||||| ||| ||||    
T  22856307 attaattgtagttagtggagtagttaagctggatgaaattcaataaataaaagtataatagtgcaaaaaaataataaatgttgaattg 22856394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 162
Target Start/End: Complemental strand, 7351735 - 7351625
Alignment:
Q  52 aattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaata 151  Q
    |||||| ||||||| |||  |||||||| || |||||||||||| |   ||||||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  7351735 aattgtgttgattttaatgataaaattaatattatttactaaaataaccttattaattctagttagtggaataattaagttggacaaaattcaataaata 7351636  T
Q  152 aaggtataata 162  Q
    |  ||||||||    
T  7351635 agagtataata 7351625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 12151321 - 12151179
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||| ||||||||| |||| || | ||||||||  || || ||||||| | |||||||||||  |||||||||||  ||||||||||| ||  | |||    
T  12151321 aatatttgtcgtttaaggtttgtgtatgattattaaggagattattaattatgttgatttcaatgataaaattagtatcatttactaaaatattgtaatt 12151222  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataa 148  Q
    |||||||||||||||| || ||||||||| || ||||| ||||    
T  12151221 aattgtagttagtggagcagttaagttgggtggaattctataa 12151179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 32970565 - 32970683
Alignment:
Q  31 acgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaag 130  Q
    ||||||||||   |||||||||||||| |||||||||||  |||||||| || |||||||||||| |    |||||||||| ||||||  || |||||||    
T  32970565 acgattattaagaaaatgattaattgtgttgatttcaatgataaaattaatattatttactaaaatactcgtattaattgttgttagtaaaataattaag 32970664  T
Q  131 ttggatgaaattcaataaa 149  Q
    |||||| ||||||||||||    
T  32970665 ttggataaaattcaataaa 32970683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 164
Target Start/End: Complemental strand, 41080743 - 41080587
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||| |||| |||| |||| || | ||| | |||||||||||||| ||||||| ||||||||||||  ||  ||||| | ||| || ||||||    
T  41080743 aataatagtcgattaaggtttatgcatgaattttaaaaaaatgattaattgtgttgattttaatagtaaaatttatatcatttattgaaatatctttatt 41080644  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    ||||||| ||||||| | |  ||||||||||| |||||||||||||||||||| |||||    
T  41080643 aattgtaattagtgg-agaggtaagttggatg-aattcaataaataaaggtatgatagt 41080587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 24880993 - 24880874
Alignment:
Q  34 attattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaaca---attaag 130  Q
    |||||||  ||||||||| ||| | ||||||||||| ||||||||| ||  ||||||||||| |  ||||||||||||||||||||||  |   | ||||    
T  24880993 attattacggaaatgattgattatgttgatttcaatggtaaaattaatatcatttactaaaatacttttattaattgtagttagtggagtagttagtaag 24880894  T
Q  131 ttggatgaaattcaataaat 150  Q
    ||||||||||||||||||||    
T  24880893 ttggatgaaattcaataaat 24880874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 25089136 - 25089212
Alignment:
Q  84 tatttactaaaacata-tttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtata 159  Q
    |||||||||||||||  |||||||||||||||||||| |  | ||||||||||||||||||||||||||| ||||||    
T  25089136 tatttactaaaacatcctttattaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtata 25089212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 27721581 - 27721503
Alignment:
Q  102 tattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||||||||||||||| ||| | |||| |||||| |||||||||||||||| |||||||||| |||| |||||||||||    
T  27721581 tattaattgtagttagtagaatagttaaattggataaaattcaataaataaaagtataatagtggaaa-aaataataaat 27721503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 4659816 - 4659713
Alignment:
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaagtgac 210  Q
    |||||||||||  |||||||||| |||||||||||||||||| | ||||||||| |||| ||||||  ||| ||||||||||     |||||||||||||    
T  4659816 tagttagtggagtaattaagttgaatgaaattcaataaataaggatataatagtggaaa-aaataaataatgttgcattggt-----attgtaaagtgac 4659723  T
Q  211 aattactttg 220  Q
    ||||| ||||    
T  4659722 aattattttg 4659713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 44426761 - 44426836
Alignment:
Q  59 ttgatttcaatagtaaaattagtagtat---ttactaaaacatatttattaattgtagttagtggaacaattaagt 131  Q
    ||||||||||| |||||||| |||||||   |||||||||||| ||||||||||||| |||||||| |||||||||    
T  44426761 ttgatttcaatggtaaaatttgtagtatcatttactaaaacatctttattaattgtaattagtggagcaattaagt 44426836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 2137436 - 2137523
Alignment:
Q  100 tttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcat 188  Q
    |||||||||||| |||| ||||  | ||||||||||| ||||||||||||||||| |||||||  ||||| ||||||||||| ||||||    
T  2137436 tttattaattgttgttattggagtatttaagttggataaaattcaataaataaagatataata-atgaaaaaaataataaatgttgcat 2137523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 5179378 - 5179510
Alignment:
Q  12 agtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgt 111  Q
    |||||||||| |||| | ||||||| |||   |||||||||||||| ||||||||||||| ||||| ||||  ||||||||||   |   ||||||||||    
T  5179378 agtcgtttaaggtttgtacacgattcttaacaaaatgattaattgtgttgatttcaatagcaaaatgagtatcatttactaaagttttcatattaattgt 5179477  T
Q  112 agttagtggaacaattaagttggatgaaattca 144  Q
    ||||||||||  |  ||| ||||||||||||||    
T  5179478 agttagtggagtagataaattggatgaaattca 5179510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 187
Target Start/End: Complemental strand, 39887886 - 39887798
Alignment:
Q  100 tttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt-tgaaacaaataataaatattgca 187  Q
    ||||||||| ||||||||| ||  ||||||||| |||||||||||||||||||| |||||| |||  |||| |||||| ||||||||||    
T  39887886 tttattaatagtagttagttgagtaattaagtttgatgaaattcaataaataaatgtataacagtgagaaaaaaataacaaatattgca 39887798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 52429481 - 52429333
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    |||||||| |||| ||||||||||| |  |||||||||||||   |||||| | || ||||| ||| |   ||||| ||||| |   |||||||||||||    
T  52429481 tcgtttaaggtttgtgcacgattatgaaggaaatgattaatttggttgattacgatggtaaatttaatgtcatttattaaaatacccttattaattgtag 52429382  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||  | |||||||| |||||||||| ||||||| |||||||||    
T  52429381 ttagtggagtagttaagttgaatgaaattcattaaataagggtataata 52429333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 6365738 - 6365663
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtg 119  Q
    |||||||||||||| |||||||||||| | ||||||||| |||||| ||||| ||  || ||||||||||||||||    
T  6365738 aaatgattaattgtgttgatttcaataatcaaattagtattatttattaaaatatcattgttaattgtagttagtg 6365663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 45331486 - 45331298
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||   ||||| ||||||   |||| ||||||| | |||||||  || ||||||||| ||  |||||||||||||   |||||    
T  45331486 aataatagtcgtttaaggttgacgcacggttattaagaaaataattaattatgttgattttgatggtaaaattaatatcatttactaaaacacccttatt 45331387  T
Q  106 aattgtagtta---gtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||||   | |||| | |||||||||||||| |||||||||| | ||||  ||| | |||| ||||||||||| ||||||||||    
T  45331386 aattgtagttaatggaggaatagttaagttggatgaagttcaataaattagggtaatataatggaaa-aaataataaatgttgcattggt 45331298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 27687380 - 27687298
Alignment:
Q  12 agtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaa 94  Q
    |||| ||||| |||| ||||| ||||||| | ||||||||| |||| ||||||||||| ||||||||| || |||||||||||    
T  27687380 agtcttttaaggtttgtgcacaattattaaaaaaatgattagttgtgttgatttcaatggtaaaattaatattatttactaaa 27687298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 29074991 - 29074885
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    ||||||||| |||| ||||||| ||| ||||||||| ||  ||||| ||||||||   |||||||||| ||||  | || | ||||||||||||||||||    
T  29074991 aaatgattagttgtgttgattttaatggtaaaattaatatcatttattaaaacatccatattaattgttgttaacgtaatagttaagttggatgaaattc 29074892  T
Q  144 aataaat 150  Q
    |||||||    
T  29074891 aataaat 29074885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 29778425 - 29778515
Alignment:
Q  62 atttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    |||||||| ||||||||||||  ||||||||||| ||  ||||||||||||||||||  |  |  |||||||||| |||||||||||||||    
T  29778425 atttcaatggtaaaattagtatcatttactaaaatatcattattaattgtagttagttaagaacctaagttggataaaattcaataaataa 29778515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 190
Target Start/End: Complemental strand, 31154235 - 31154091
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||||| ||||||| |||  ||||||||||| ||| |||||||    ||||||||||||||||| || ||    ||||||| ||||||||||    
T  31154235 aaatgattaattgtgttgattttaatgataaaattagtattatctactaaattgcatttattaattgtagttggtagagtgcttaagtttgatgaaattc 31154136  T
Q  144 aataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    | |||||||  ||||| || |||||| ||||||| ||| ||||||||    
T  31154135 agtaaataagtgtatagta-ttgaaa-aaataattaatgttgcattg 31154091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 37539174 - 37539097
Alignment:
Q  104 ttaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||||||||||||| ||  | ||||||| ||||||||||||||||||| ||||| ||||| |||| |||| ||||||    
T  37539174 ttaattgtagttagtagagtagttaagtttgatgaaattcaataaataagggtatcatagtggaaaaaaattataaat 37539097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 51028503 - 51028576
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtta 116  Q
    |||| |||||||||| ||||||| |||| |||| ||||||| ||||| ||||| || |||||||||||||||||    
T  51028503 gaaacgattaattgtgttgattttaataataaagttagtagcatttattaaaatatttttattaattgtagtta 51028576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 21909987 - 21910133
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    |||||||| |||| ||||| |||||||  ||||||||||||||| |||||||  || ||||||||||||   ||| ||||||||   ||||||| | |||    
T  21909987 tcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcgtttgctaaaaca-ccttattaactatag 21910085  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    || | |||  | ||||||| |||| |||||||||||| |||||||||||    
T  21910086 tttgaggagtagttaagtttgatggaattcaataaat-aaggtataata 21910133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 26252504 - 26252555
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgt 57  Q
    |||| ||||||||||||||||||||| |||||||| | ||||||||||||||    
T  26252504 aatagtagtcgtttaaagtttttgcatgattattaaaaaaatgattaattgt 26252555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 41121835 - 41121913
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtgga 121  Q
    ||||||||||||||| |||||||  || |||||||||| |  ||||||||||| |   |||||||||||||||||||||    
T  41121835 gaaatgattaattgtgttgattttgatggtaaaattagcataatttactaaaatacccttattaattgtagttagtgga 41121913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 43500762 - 43500848
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaaca 97  Q
    ||||||||||| |||| |||||||||||||  ||||| ||||||||| |||||||  || ||| |||||||   |||||||||||||    
T  43500762 tagtcgtttaaggtttatgcacgattattaaggaaattattaattgtgttgattttgatggtataattagtttcatttactaaaaca 43500848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 6267829 - 6267918
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaa 95  Q
    |||| ||||||||||| |||| ||||| ||| ||| |||||||||||||||| ||||||| |||  ||||| |||||  || ||||||||    
T  6267829 aataatagtcgtttaaggtttgtgcactatttttaaagaaatgattaattgtgttgattttaatgataaaactagtatcatgtactaaaa 6267918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 9412841 - 9412922
Alignment:
Q  71 gtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    |||||||||| || ||||| ||||| ||  | |||||||||||||| ||||| | ||  |||||||||||||||||||||||    
T  9412841 gtaaaattagaagcatttaataaaatattctgattaattgtagttaatggaatagttgggttggatgaaattcaataaataa 9412922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 3312220 - 3312141
Alignment:
Q  42 agaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtgga 121  Q
    |||||||||||||||| ||||||| |||  | |||||||||  |||||||| || ||   ||||||||||||||||||||    
T  3312220 agaaatgattaattgtgttgattttaatgattaaattagtatcatttactataatattgatattaattgtagttagtgga 3312141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 7439888 - 7439963
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagt 81  Q
    |||| ||||||||||| |||||||||||||| ||| | ||||||||||  || |  |||||||| |||||||||||    
T  7439888 aataatagtcgtttaaggtttttgcacgatttttagaaaaatgattaaccgtgtcaatttcaatggtaaaattagt 7439963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 15057521 - 15057464
Alignment:
Q  59 ttgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtta 116  Q
    ||||||| ||||||||||||||||  || || |||||||| |||||||||| ||||||    
T  15057521 ttgattttaatagtaaaattagtatcatatattaaaacatttttattaattatagtta 15057464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 52837330 - 52837269
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||||||| |||||||  | ||||  || |||||||||||||| |||||||||||||    
T  52837330 ttattaattgtagctagtggagtagttaatatgaatgaaattcaataattaaaggtataata 52837269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 17988572 - 17988643
Alignment:
Q  47 tgattaattgtattgatttcaatagtaaaattag--tagtatttactaaaacatatttattaattgtagtta 116  Q
    ||||||||||| |||||||||||  |||||||||  || |||||||||||| |   ||||||||||||||||    
T  17988572 tgattaattgtgttgatttcaatgttaaaattagtatattatttactaaaatactcttattaattgtagtta 17988643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 20564076 - 20564112
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaatta 79  Q
    |||||||| |||| |||||||||||||||||||||||    
T  20564076 gaaatgataaattttattgatttcaatagtaaaatta 20564112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 35367622 - 35367694
Alignment:
Q  11 tagtcgtttaaa-gtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagta 82  Q
    |||||||||||  |||| |||||||||||||   |||||||||||||| |||||||  || ||||||||||||    
T  35367622 tagtcgtttaagcgtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 35367694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 35538750 - 35538678
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtta 116  Q
    |||| ||||||||| |||||||||||  ||||||   || |||||||||||| ||  ||||||||||||||||    
T  35538750 aaattattaattgtgttgatttcaatgataaaatggatattatttactaaaatatccttattaattgtagtta 35538678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 2e-57; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 36460386 - 36460570
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||||||||||||||| |||||||||||||   |||| ||||||||| || |||||||||||||||||||||  ||||| ||||| ||  |||||    
T  36460386 aatattagtcgtttaaagtttgtgcacgattattaagaaaattattaattgtgttaatttcaatagtaaaattagtaacatttattaaaatattcttatt 36460485  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  36460486 aattgtagttaatggagtaattaagttggatgaaattcaataaataagggtataatagtggaaacaaataataaatattgcattg 36460570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 11632225 - 11632044
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||| |||||  ||| ||||||||||||| | |||||||||||||| ||||||||||  |||||||||||||||||||||||||||  ||||||    
T  11632225 aatattagtcatttaagatttgtgcacgattattaaa-aaatgattaattgtgttgatttcaacggtaaaattagtagtatttactaaaacacctttatt 11632127  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||    
T  11632126 aattgtagttagtggaaaagttaagttggatgaaattcaataaataaaagtataatag-tgaaa-aaataataaatattacattg 11632044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 43253841 - 43254043
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    |||||||| |||| |||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||   |||||||||||||    
T  43253841 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtag 43253940  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaa-taataaatattgcattggtgttgcattgtaaagtgacaa 212  Q
    ||||||||  | |||||| |||||||||||| ||||||| ||||||||||| |||| ||| |||||||| ||||||||||     |||||||||||||||    
T  43253941 ttagtggagtagttaagtgggatgaaattcattaaataagggtataatagtggaaaaaaactaataaatgttgcattggt-----attgtaaagtgacaa 43254035  T
Q  213 ttactttg 220  Q
    ||| ||||    
T  43254036 ttattttg 43254043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 8679029 - 8679198
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||||||||  ||| |||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| ||  |||||||||     
T  8679029 tagtcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaagatccttattaatta 8679128  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||||||| |  ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  8679129 tagttagtgaattaattaagttggatgaaattcaataaataagggtataatagtggaaa-aaataataaat 8679198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 37695635 - 37695823
Alignment:
Q  6 aatattagtcgtttaaagtttt-tgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttat 104  Q
    |||| ||||||||||| ||||| |||||||||||||  ||||||||||||||| ||||||||||| ||||||||| ||  |||||||||||||   ||||    
T  37695635 aataatagtcgtttaaggttttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacacccttat 37695734  T
Q  105 taattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcattggt 192  Q
    |||||||||||||||||  | ||||||| ||||||||||||||||||| ||||||||| | | ||| ||||||||||| ||||||||||    
T  37695735 taattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaaaaaataataaatgttgcattggt 37695823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 29023941 - 29024091
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||| ||||||||||||| | |||||||||||||| |||||||  || ||||||||||||  |||||||||||||| || ||||||||    
T  29023941 tagtcgtttaaggtttatgcacgattattaaaaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacatctt-attaattg 29024039  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  29024040 tagttagtggagtaattaagttggatgaaattcaataaataatggtataata 29024091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 215
Target Start/End: Complemental strand, 37312095 - 37311890
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| |   |||||    
T  37312095 aatattagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaaacccttatt 37311996  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaaca-aataataaatattgcattggtgttgcattgtaa 204  Q
    ||||||||||||||||  | |||| ||  ||||||||||||||||||  |||||||| | |||| | ||||||||||  ||||||| |     |||||||    
T  37311995 aattgtagttagtggagtagttaaatttaatgaaattcaataaataagagtataataatagaaaaataataataaatgctgcattgat-----attgtaa 37311901  T
Q  205 agtgacaatta 215  Q
    |||||||||||    
T  37311900 agtgacaatta 37311890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 19823151 - 19822971
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||| |||||| |||| |||||||||||||  ||||||||||||||| |||||||  || ||| ||||||||  |||||||||||||   ||||||||||    
T  19823151 tagttgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtagaattagtatcatttactaaaacacccttattaattg 19823052  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||||| ||  ||||| |||||||||||  |||||||||    
T  19823051 tagttagtggaatagttaagttggatgaaattcaataaataagggtatatta-atgaaaaaaataataaatgctgcattggt 19822971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 28690762 - 28690907
Alignment:
Q  16 gtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtt 115  Q
    |||||| |||| ||||||||||||| |||||||||||||||| ||||||||||  ||||||||| ||  ||||||||||| || ||||||||||||||||    
T  28690762 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaacggtaaaattaatatcatttactaaaatatctttattaattgtagtt 28690861  T
Q  116 agtggaacaattaagttggatgaaattcaataaataaaggtataat 161  Q
    ||||  | | |||||||||||||||||||||||||||| |||||||    
T  28690862 agtgagatagttaagttggatgaaattcaataaataaatgtataat 28690907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 10366618 - 10366805
Alignment:
Q  12 agtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaaca-------tatttat 104  Q
    |||||||||| |||| |||||||||||||   |||||||||||||| ||||||||||| ||||||||||||  ||||| |||||||       || ||||    
T  10366618 agtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtatcatttattaaaacactcttattaattat 10366717  T
Q  105 taattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||||||| |  | ||||||||||||||||||||||||||| ||||||||| | | || ||||||||||| ||||||||||    
T  10366718 taattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataataatgggaaaaaataataaatgttgcattggt 10366805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 14194694 - 14194545
Alignment:
Q  12 agtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgt 111  Q
    |||||||||| |||| ||||||||| ||| ||||||||| |||||| |||||||||||  |||||||||||  ||||||||||| |  ||||| ||||||    
T  14194694 agtcgtttaaggtttgtgcacgatttttaaagaaatgatcaattgtgttgatttcaatgataaaattagtaccatttactaaaatacttttatgaattgt 14194595  T
Q  112 agttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
     |||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  14194594 -gttagtggagtaattaagttggatgaaattcaattaataaaggtataata 14194545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 30190635 - 30190805
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||| |||||| |||| |  ||||||||||||||| ||||||||||| ||||||||||||  ||||||||||| |   ||||||||||    
T  30190635 tagtcgtttaaggtttgtgcacggttatgaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaaatacccttattaattg 30190734  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    |||||||||||  | ||||||||||||||||||||| ||||| |||| |||| | ||||  ||||||||||    
T  30190735 tagttagtggagtagttaagttggatgaaattcaattaataagggtaaaataatggaaattaataataaat 30190805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 1778787 - 1778632
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||| ||||||||  ||||||||||||||| |||||||||||  |||||||| |   ||||||||||||||  |||||    
T  1778787 aatattagtcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatgataaaattaatgacatttactaaaacatccttatt 1778688  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
     |||||||||||||||  |  |||||||||||||||||||||||||| |||||||||    
T  1778687 -attgtagttagtggagtagataagttggatgaaattcaataaataagggtataata 1778632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 192
Target Start/End: Original strand, 3901157 - 3901305
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    ||||||||||||||||| ||||||||  |||||||| ||  ||||||||||||||  |||||| |||||||||||||   | ||||||||||||||||||    
T  3901157 aaatgattaattgtattaatttcaatgataaaattaatatcatttactaaaacattcttattagttgtagttagtggggtacttaagttggatgaaattc 3901256  T
Q  144 aataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||| ||||||||| | |||| ||||||||||| || |||||||    
T  3901257 aataaataagggtataataatggaaaaaaataataaatgttacattggt 3901305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 23004353 - 23004539
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |  || |||||||  ||||||||||||||| | ||||||||| |||||||||||||||| ||||||||||   |||||    
T  23004353 aatattagtcgtttaaggtttgtt-actattattaaggaaatgattaattgtgtcgatttcaatggtaaaattagtagtatatactaaaacacccttatt 23004451  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgt 194  Q
    ||||||||||||||||  | |||||||| |||||||||||||||||| ||| ||| || ||||| ||| || ||||  |||||||||||    
T  23004452 aattgtagttagtggagtagttaagttgtatgaaattcaataaataagggtgtaaaag-tgaaaaaaaaaaaaaatgctgcattggtgt 23004539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 198
Target Start/End: Original strand, 38137413 - 38137608
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagt---atttactaaaacatattt 102  Q
    |||||||||||||||| |||| |||| |||||| |  ||||| ||| ||||| | |||||||||||||||||||||| |   || |||||||| ||  ||    
T  38137413 aatattagtcgtttaaggtttgtgcatgattataaatgaaataattcattgtgtcgatttcaatagtaaaattagtactgacatctactaaaatattctt 38137512  T
Q  103 attaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgca 198  Q
    ||||| ||||||||||||   | |||| || ||||||||||||||||||||| ||||||||| ||||  |||||||||||||||||| || |||||    
T  38137513 attaactgtagttagtggggtagttaaattcgatgaaattcaataaataaagatataatagtggaaaataataataaatattgcattagtattgca 38137608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 190
Target Start/End: Complemental strand, 11905959 - 11905784
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    ||||||||||||| |||||||||||||   |||||||||||||| || ||||  ||  |||||||||||  |||||||||| ||   |||||||||||||    
T  11905959 tcgtttaaagtttatgcacgattattaagaaaatgattaattgtgttaattttgatgataaaattagtatcatttactaaagcacccttattaattgtag 11905860  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||| ||||    ||||||||||||||||||||||||||||| ||||||| | |||| ||||||||||| ||||||||    
T  11905859 ttaatggagttgttaagttggatgaaattcaataaataaagatataataatggaaa-aaataataaatgttgcattg 11905784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 37772943 - 37773145
Alignment:
Q  15 cgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagt 114  Q
    ||||||| |||| |||| ||||||||  |||||||||||||||||||||| |||| ||||||||| ||  ||||||||||| |   ||||||||| ||||    
T  37772943 cgtttaaggtttgtgcatgattattaaggaaatgattaattgtattgattacaatggtaaaattaatatcatttactaaaatacccttattaattatagt 37773042  T
Q  115 tagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataa--taaatattgcattggtgttgcattgtaaagtgacaa 212  Q
     ||||||| | |||||||| |||||||||| ||||||| ||||||||| | |||| ||||||  |||||  |||||||||     |||||||||||||||    
T  37773043 cagtggaatagttaagttgaatgaaattcattaaataagggtataataatggaaaaaaataaaataaatgctgcattggt-----attgtaaagtgacaa 37773137  T
Q  213 ttactttg 220  Q
    ||| ||||    
T  37773138 ttattttg 37773145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 17652893 - 17652715
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||| | |||| |||||||||||||  ||||||||||||||| |||||||  || |||||| |||||    ||||||||||||  |||||    
T  17652893 aataatagtcgtttgaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta----ttactaaaacatccttatt 17652798  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
    ||||||||||||||    | ||||||||||||||||| ||||||||| ||||||||| |||||| |||| ||||||| ||||||    
T  17652797 aattgtagttagtgaggtagttaagttggatgaaatttaataaataagggtataataattgaaa-aaattataaatactgcatt 17652715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 37497629 - 37497481
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    ||||||||  ||| |||||||||||||  ||||||||| ||||| |||||||  || ||||||||||||  |||||||||||||   || |||| |||||    
T  37497629 tcgtttaagatttatgcacgattattaaggaaatgatttattgtgttgattttgatggtaaaattagtatcatttactaaaacaccgttgttaactgtag 37497530  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||  | |||||||||||||||||||||||||||| ||||||||    
T  37497529 ttagtggagtagttaagttggatgaaattcaataaataaacgtataata 37497481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 3313395 - 3313253
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||||||||||||   |||||||||    | | ||||||||| ||||||||||||| ||| |||||||||   |||||    
T  3313395 aatattagtcgtttaaggtttgtgcacgattattaagaaaatgatta----tgtcgatttcaatggtaaaattagtagaattaactaaaacacccttatt 3313300  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    ||||||||||| ||||  | |||||||||||||||||||||||||||    
T  3313299 aattgtagttaatggagtatttaagttggatgaaattcaataaataa 3313253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 44 - 180
Target Start/End: Complemental strand, 12904972 - 12904835
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatattt-attaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    |||| ||||||| | |||||||||||  |||||||||||  |||||  |||| || ||| |||||||||||||||||||  |||||||||||||||||||    
T  12904972 aaataattaattatgttgatttcaattataaaattagtatgatttatcaaaatatcttttattaattgtagttagtggagtaattaagttggatgaaatt 12904873  T
Q  143 caataaataaaggtataatagttgaaacaaataataaa 180  Q
    |||||||||| ||||||||||| |||| ||| ||||||    
T  12904872 caataaataagggtataatagtggaaaaaaaaaataaa 12904835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 24569075 - 24569219
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||| ||||  ||| |||||||||||||   |||||||||||||| ||||||||||| ||||||||| || |||||||||||| |   ||||||||||    
T  24569075 tagtcgcttaagatttatgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatattatttactaaaatacccttattaattg 24569174  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaagg 155  Q
    |||||||||||  | |||||||| |||||||||| ||||| ||||    
T  24569175 tagttagtggagtagttaagttgaatgaaattcattaaatgaagg 24569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 27471477 - 27471305
Alignment:
Q  9 attagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaat 108  Q
    |||| ||||||||  ||| |||||||||||||   |||||||||||| | ||||||||||| || |||||||| | |||||||||||||   ||||||||    
T  27471477 attaatcgtttaagatttgtgcacgattattaagaaaatgattaattatgttgatttcaatggtgaaattagttgcatttactaaaacactcttattaat 27471378  T
Q  109 tgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    | ||  |||||||  | |||||||| ||||||||||||||||||||||||  |||| || | |||||||||||    
T  27471377 tataagtagtggagtagttaagttgaatgaaattcaataaataaaggtatggtagtggacaaaaataataaat 27471305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 30711218 - 30711035
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||  ||||| |||| ||||   |||||| |||||| ||||||| | ||||||| |||  |||||||| ||  |||||||||||||   |||||    
T  30711218 aatattagtattttaaggtttgtgcattgttattaaagaaataattaattatgttgattttaatgataaaattaatatcatttactaaaacaccattatt 30711119  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||||| |||| |||||||||| |||||||||||||||||||   |||||||| ||||| ||||||||||| ||| ||||    
T  30711118 aattgtagttaatggagcaattaagttagatgaaattcaataaataagattataatag-tgaaaaaaataataaatgttgtattg 30711035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 164
Target Start/End: Complemental strand, 34750630 - 34750483
Alignment:
Q  17 tttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtta 116  Q
    ||||| |||| ||||||||| ||   ||||||||| ||||| ||||||| ||| ||||||||||||  ||||||||||||||  |||||||||||||||     
T  34750630 tttaaggtttgtgcacgatttttgatgaaatgattgattgtgttgattttaatggtaaaattagtatcatttactaaaacatccttattaattgtagttg 34750531  T
Q  117 gtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    |||||  | |||| |||||||||| | ||||||||| |||||||||||    
T  34750530 gtggagtagttaacttggatgaaaattaataaataatggtataatagt 34750483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 192
Target Start/End: Original strand, 39043772 - 39043911
Alignment:
Q  54 ttgtattgatttcaatagtaaaattagtagtat---ttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaat 150  Q
    |||| ||||||||||| ||||||||| ||||||   ||||||||| |  ||||||||||||||||||||||  | |||||||| ||||||||||||||||    
T  39043772 ttgtgttgatttcaatggtaaaattaatagtatcatttactaaaatacctttattaattgtagttagtggagtagttaagttgaatgaaattcaataaat 39043871  T
Q  151 aaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    || |||||||||  ||||| ||||||||||| ||||||||||    
T  39043872 aagggtataata-atgaaa-aaataataaatgttgcattggt 39043911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 12736542 - 12736717
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||| ||||||||||| ||||||||| |||  ||||||||||||||| ||||||  |||  |||||||||||  |||||||| || |   |||||    
T  12736542 aataatagttgtttaaagtttgtgcacgatttttaaggaaatgattaattgtgttgattctaatgataaaattagtatcatttactacaatacccttatt 12736641  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaata 182  Q
    ||||||| |||||| |  | |||| |||||| ||||||||||||||| |||||||||| |||||  |||||||||||    
T  12736642 aattgtacttagtgtagtagttaatttggataaaattcaataaataagggtataatag-tgaaaacaataataaata 12736717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 45710995 - 45710849
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||  |||||| || |||   |||||||||||| | |||||||  || ||||||||| ||  |||||||||||||  ||||||    
T  45710995 aataatagtcgtttaaggttgatgcacggttgttaagaaaatgattaattatgttgattttgatggtaaaattaatatcatttactaaaacacttttatt 45710896  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    ||||||||||||||||  | |||||||||||||| ||||||||||||    
T  45710895 aattgtagttagtggagtagttaagttggatgaagttcaataaataa 45710849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 49830270 - 49830125
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaa-tgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaatt 109  Q
    ||||||||||| |||| ||||||||||||| | ||| ||||||||||| ||||||||||||||||||||| ||  ||||||||||| |   |||||||||    
T  49830270 tagtcgtttaacgtttgtgcacgattattaaaaaaaatgattaattgtgttgatttcaatagtaaaattaatatcatttactaaaataccattattaatt 49830171  T
Q  110 gtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||||||       |  ||||| ||||||||||||||||||| ||||||||    
T  49830170 gtagttagt-------tggagttgaatgaaattcaataaataaatgtataata 49830125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 19612043 - 19611896
Alignment:
Q  16 gtttaaagtttttgcacgattattatagaaa-tgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagt 114  Q
    ||||||||||| || |||||| ||| ||||| ||||||||||| |||||||||||  |||||||| ||  ||||||||||| ||  ||||||||||| ||    
T  19612043 gtttaaagtttgtgtacgattttta-agaaagtgattaattgtgttgatttcaatgttaaaatta-tataatttactaaaatatccttattaattgttgt 19611946  T
Q  115 tagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    |||||||  | ||||||| |||||||||||||||||||| |||| |||||    
T  19611945 tagtggagtagttaagtttgatgaaattcaataaataaatgtattatagt 19611896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 190
Target Start/End: Original strand, 49447766 - 49447946
Alignment:
Q  8 tattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaa 107  Q
    |||||||||||||| |||| || ||||| ||||  ||||||||||||||| ||||||||||     ||| || || ||||||| |||| |   |||||||    
T  49447766 tattagtcgtttaatgtttgtgtacgataattaacgaaatgattaattgtgttgatttcaacg---aaaataatattatttaccaaaatacccttattaa 49447862  T
Q  108 ttgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaata-ataaatattgcattg 190  Q
    ||||||||||| ||| | |||| || ||||||||| ||||||||| ||||||||||| |||| ||||| ||||||| |||||||    
T  49447863 ttgtagttagtagaatagttaaatttgatgaaatttaataaataagggtataatagtagaaaaaaatatataaatagtgcattg 49447946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 31158492 - 31158663
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| ||||||||||||| | ||||||||||||||  ||||||| |||||||||||| ||  |||||||||||||    ||||    
T  31158492 aatattagtcgtttaaggtttgtgcacgattattaaa-aaatgattaattgtgctgatttcgatagtaaaattaataacatttactaaaacactcctatt 31158590  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
    | ||          ||| | ||||||| ||||||||||||||||||| |||||||||| ||||| |||||||||||| ||||||    
T  31158591 attt----------gaatagttaagttagatgaaattcaataaataatggtataatag-tgaaaaaaataataaatactgcatt 31158663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 33491053 - 33491125
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaatt 78  Q
    |||||||||||||||| |||| |||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  33491053 aatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatagtaaaatt 33491125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 192
Target Start/End: Complemental strand, 36476691 - 36476543
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||| ||| ||||| |||||| |||| ||||||||| ||  ||||||||||| |   |||||||||||||||||| ||  | ||||||| ||||||||||    
T  36476691 aaataattgattgtgttgattgcaatggtaaaattaatatcatttactaaaatacccttattaattgtagttagtagagtagttaagtttgatgaaattc 36476592  T
Q  144 aataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||| ||||||||| | |||| || ||||||||  |||||||||    
T  36476591 aataaataagggtataataatagaaaaaagtaataaatgctgcattggt 36476543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 24245117 - 24245238
Alignment:
Q  59 ttgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtat 158  Q
    |||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||  |  | |||| | ||||| ||||||||||||||   |||    
T  24245117 ttgatttcaataataaaattagtattatttactaaaacata-ttattaattgtacttagtaaagtagttaaatcggatgcaattcaataaataataatat 24245215  T
Q  159 aatagttgaaacaaataataaata 182  Q
    ||||||||||| ||||||||||||    
T  24245216 aatagttgaaa-aaataataaata 24245238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 51837934 - 51838113
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||| ||||| |||| |||| || |||||   |||||||||||||| |||||||||||  |||||||| ||  ||||||||||| |   |||||| |||    
T  51837934 tagtcatttaaggtttgtgcatgagtattaagtaaatgattaattgtgttgatttcaatgataaaattaatatcatttactaaaatacccttattagttg 51838033  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcatt 189  Q
    ||| |||||||  | ||| |||| |||||||||| ||||||| ||||||||||| | ||| ||||||||||| |||||||    
T  51838034 tagctagtggagtagttacgttgaatgaaattcattaaataagggtataatagtggaaaaaaaataataaatgttgcatt 51838113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 38795489 - 38795303
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| ||||||||  |||  ||||||||||||||| || |||||||| ||||||||||||  ||||||  |||     |||||    
T  38795489 aataatagtcgtttaatgtttgtgcacgatatttaaggaaatgattaattgtgtttatttcaatggtaaaattagtatcatttacccaaatgcccttatt 38795390  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||| |||||    ||||||||||||||||| |||||| || || |||||||| ||||  || |  |||||||||||||||    
T  38795389 aattgtagttggtggagttgttaagttggatgaaatttaataaaaaagggcataatagtggaaaataaaataaaatattgcattggt 38795303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 44301700 - 44301522
Alignment:
Q  13 gtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgta 112  Q
    ||||||||| |||| ||| ||| | |||  |||||  |||||| | |||||||||||  |||||||||||  ||||||||||| |   |||| |||||||    
T  44301700 gtcgtttaaggtttgtgcccgacttttaaggaaatatttaattatgttgatttcaatgataaaattagtatcatttactaaaatacccttatcaattgta 44301601  T
Q  113 gttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaaca-aataataaatattgcattg 190  Q
     ||||||||  | |||||||||||||||||||||||||||  |||||||||| |||| | | |||||||| ||||||||    
T  44301600 attagtggagtagttaagttggatgaaattcaataaataagagtataatagtggaaaaatattaataaatgttgcattg 44301522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 30682073 - 30682182
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    ||||||||||||||| || |||| |||  |||||| ||||  ||||||||||| |   |||||||||||||||| ||||| |||||||||||| ||||||    
T  30682073 gaaatgattaattgttttaattttaatgttaaaatgagtatcatttactaaaataatcttattaattgtagttaatggaataattaagttggacgaaatt 30682172  T
Q  143 caataaataa 152  Q
    ||||||||||    
T  30682173 caataaataa 30682182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 54726592 - 54726447
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||| ||| |||||||  || ||||||||| ||  |||||||||||||| ||||||||||||||||| ||||  | ||||||| |||||| ||     
T  54726592 aaatgattaaatgtgttgattttgatggtaaaattaatatcatttactaaaacatctttattaattgtagttaatggagtagttaagttagatgaagttt 54726493  T
Q  144 aataaataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
    ||||||||| ||||| ||| | | || || |||||||| |||||||    
T  54726492 aataaataagggtattataatgggaaaaactaataaatgttgcatt 54726447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 51064788 - 51064864
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagta 82  Q
    ||||||||||||||||||||| ||||||| ||||| | |||||||||||||| ||| ||||||| ||||||||||||    
T  51064788 aatattagtcgtttaaagtttatgcacgaatattaaaaaaatgattaattgtgttgctttcaatggtaaaattagta 51064864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 182
Target Start/End: Original strand, 36462945 - 36463090
Alignment:
Q  35 ttattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttgg 134  Q
    |||||| | |||||||| || |||||||||| |||  ||||||| |||| ||||||||||| |   ||||||||||| ||| |||||  |||||||||||    
T  36462945 ttattaaaaaaatgattgatagtattgattttaatgttaaaattggtagcatttactaaaataaccttattaattgttgtttgtggagtaattaagttgg 36463044  T
Q  135 atgaaattcaataaataaaggtataatagttgaaacaaataataaata 182  Q
    |||||||| ||||||||||  ||||||| || ||| ||||||||||||    
T  36463045 atgaaattaaataaataaa-atataata-ttaaaaaaaataataaata 36463090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 5322914 - 5323088
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||| |||||| |||| ||||||||||||| |  ||||||||||| | ||||||||| |  |||||||| ||  ||||||||||| | | |||||||||     
T  5322914 tagttgtttaaggtttgtgcacgattattaaa--aatgattaattatgttgatttcagtgataaaattaatatcatttactaaaatacacttattaatta 5323011  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgca 187  Q
    || |||||  |  | ||||||| ||||||||||||||||||| ||||||||| | |||| |  ||||||||| ||||    
T  5323012 taattagtaaagtagttaagtttgatgaaattcaataaataagggtataataatggaaaaaggtaataaatactgca 5323088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 24703687 - 24703622
Alignment:
Q  126 ttaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattgg 191  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||| ||||||    
T  24703687 ttaagttggatgaaattcaataaataaagatataatagtggaaagaaataacaaatattacattgg 24703622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 146
Target Start/End: Complemental strand, 43719411 - 43719272
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||| ||||||||| | |||||| ||||   |||||||||||||| ||||||| ||| ||||||||| ||  ||| ||| ||||||  |||||    
T  43719411 aataatagtcggttaaagtttgtacacgatcattaataaaatgattaattgtgttgattttaatggtaaaatta-tatcattcactgaaacatccttatt 43719313  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaat 146  Q
    ||||||||||||||||  | |||| ||||||| ||||||||    
T  43719312 aattgtagttagtggagtagttaaattggatggaattcaat 43719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 52291000 - 52290892
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    ||||||||||||||||||||||  || ||||||||||||  ||||| |||||||   ||||||||| |||||||||||  | |||||||| || || |||    
T  52291000 aaatgattaattgtattgattttgatggtaaaattagtaccatttattaaaacagccttattaattatagttagtggagtagttaagttgaataaagttc 52290901  T
Q  144 aataaataa 152  Q
    |||||||||    
T  52290900 aataaataa 52290892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 141
Target Start/End: Original strand, 54477465 - 54477564
Alignment:
Q  42 agaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaat 141  Q
    ||||||| |||||||| ||||||| ||| ||||||||| ||  ||||||||||| || ||||||||||||||||| ||||  | |||||||| |||||||    
T  54477465 agaaatggttaattgtgttgattttaatggtaaaattaatatcatttactaaaatatttttattaattgtagttaatggagtagttaagttgaatgaaat 54477564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 19609406 - 19609288
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    ||||||||| |||| ||||||||||| ||||||||| ||  |||||| |||| ||  |||||| |||| |||||||||  |  |||||| ||| ||||||    
T  19609406 aaatgattatttgtgttgatttcaatcgtaaaattaatatcatttacaaaaatattcttattacttgttgttagtggagtagataagtttgataaaattc 19609307  T
Q  144 aataaataaaggtataata 162  Q
    |||||||||| ||||||||    
T  19609306 aataaataaatgtataata 19609288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 50035187 - 50035299
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||| | ||||| |||| |||| ||||||||   |||||| ||||| | |||||||||||| |||||||||||| |||||| ||||||   || ||    
T  50035187 aatattagacttttaaggtttgtgcatgattattaagaaaatgaataattatgttgatttcaataataaaattagtagcatttaccaaaacaccgttgtt 50035286  T
Q  106 aattgtagttagt 118  Q
    |||||||||||||    
T  50035287 aattgtagttagt 50035299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 34957648 - 34957502
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| || || |||| ||  ||||||||||||||| |||| ||  || |||||||| |||  ||||||| ||| ||  |||||    
T  34957648 aataatagtcgtttaaggtttatggacaattactaaggaaatgattaattgtgttgaatttgatggtaaaatttgtataatttacttaaatatccttatt 34957549  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    |||| |||||||||||  | || ||||  ||||||||||||||||||    
T  34957548 aattatagttagtggagtagttcagttaaatgaaattcaataaataa 34957502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 164
Target Start/End: Complemental strand, 38512170 - 38512012
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||||||||||||| || | |||| || || |||| ||||||| ||||||||| |||  |||||||  ||  ||||| ||||| |||||||||    
T  38512170 aataatagtcgtttaaagtttgtgtatgatttttttaaaaataattaattttattgattttaatgataaaattgatatcatttattaaaatatatttatt 38512071  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
     |||||| ||| ||||  | ||||||| |||| |||| || |||||| |||||| ||||    
T  38512070 gattgtaattattggagtagttaagtttgatggaatttaaaaaataagggtatagtagt 38512012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 53560362 - 53560216
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||| |||||| |||  |||||||| ||||  ||||||||||||| | |||||||  || |||||||| |||  |||||||||||||   |||||    
T  53560362 aataatagttgtttaaggttgatgcacgatgattaaggaaatgattaattatgttgattttgatggtaaaatttgtatcatttactaaaacacccttatt 53560263  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    || | |||||||| ||  | |||||||| ||||| ||||||||||||    
T  53560262 aaatatagttagtagagtagttaagttgaatgaagttcaataaataa 53560216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 23068248 - 23068187
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||||||||| ||| || | ||||||| |||||||||||||||||||| ||||||||    
T  23068248 ttattaattgtagtttgtgaaatatttaagttagatgaaattcaataaataaaagtataata 23068187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 152
Target Start/End: Complemental strand, 38705267 - 38705174
Alignment:
Q  61 gatttcaatagtaaaattagtagtat---ttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    ||||||||| |||||||||||| |||   ||||||||  ||  |||||||||||||||||| ||  ||||||||| |||||||||||||||||||    
T  38705267 gatttcaatggtaaaattagtactatcatttactaaat-attcttattaattgtagttagttgagtaattaagttagatgaaattcaataaataa 38705174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 41351628 - 41351688
Alignment:
Q  100 tttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataa 160  Q
    |||||||||  |||||||||||  | |||||||| ||||||||||||||||||||||||||    
T  41351628 tttattaatgatagttagtggagtagttaagttgaatgaaattcaataaataaaggtataa 41351688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 220
Target Start/End: Original strand, 33491402 - 33491540
Alignment:
Q  79 agtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaa-ttcaataaataaaggtataatagt-tgaaacaaataa 176  Q
    ||||| |||||||||||||   ||||||||| |||||||||||  | |||||||| |||||| || ||||||||| |||||||||||  |||| |||| |    
T  33491402 agtagaatttactaaaacactcttattaattatagttagtggagtagttaagttgtatgaaattttaataaataagggtataatagtgcgaaaaaaatca 33491501  T
Q  177 taaatattgcattggtgttgcattgtaaagtgacaattactttg 220  Q
    |||||| | |||| ||     |||||||||||||||||| ||||    
T  33491502 taaatactacattagt-----attgtaaagtgacaattattttg 33491540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 50036522 - 50036576
Alignment:
Q  126 ttaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||||| ||||||||||||||||||||||||||||||  |||| |||||||||||    
T  50036522 ttaagtttgatgaaattcaataaataaaggtataatagcggaaa-aaataataaat 50036576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 52206854 - 52206921
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||||||| ||  |||||||||||| ||||||||| ||  ||||||||||| ||||||||||||||    
T  52206854 gaaatgattagttaaattgatttcaatggtaaaattaatatcatttactaaaatatatttattaattg 52206921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 29595735 - 29595809
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagt 118  Q
    ||||| |||||| ||||||||| ||||||||||||| || |||||| ||||| || |||||||||| || |||||    
T  29595735 aaatggttaattatattgattttaatagtaaaattaatattatttattaaaatatttttattaattataattagt 29595809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 190
Target Start/End: Original strand, 27549323 - 27549440
Alignment:
Q  74 aaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt-tgaaacaa 172  Q
    |||||||| | |||||||||||||   |||||| || ||||||||||   | |||| ||  || ||||||||||||||||| |||||||||  |||| ||    
T  27549323 aaattagttgcatttactaaaacaacattattagttatagttagtggcgtagttaaattaaattaaattcaataaataaagttataatagtgggaaaaaa 27549422  T
Q  173 ataataaatattgcattg 190  Q
    ||||||||| ||||||||    
T  27549423 ataataaatgttgcattg 27549440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 33459141 - 33459046
Alignment:
Q  60 tgatttcaatagtaaaattagtagtat---ttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    ||||||||||  |||||||||||||||   ||| ||||| || ||||||||||||||||||| ||| | |||| ||| |||||||| | |||||||    
T  33459141 tgatttcaattataaaattagtagtatcatttattaaaatatctttattaattgtagttagtagaatacttaaattgaatgaaatttattaaataa 33459046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 40194553 - 40194485
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaa 169  Q
    ||||||||||||||||||||   | || ||||||| |||||| ||||||||||| ||||||||| ||||    
T  40194553 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggaaa 40194485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 42278773 - 42278694
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaa 122  Q
    |||||||||| ||| |||||||||||| |||||||||  |  |||||||||||||    |||||||| ||||||||||||    
T  42278773 gaaatgattagttgaattgatttcaatcgtaaaattaacatcatttactaaaacactcatattaattatagttagtggaa 42278694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 41038458 - 41038538
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    |||||||||||||||| || |  | ||||||||| |||| |||||||||||| | ||| ||| | |||| |||||||||||    
T  41038458 ttattaattgtagttaatgaagtagttaagttggttgaagttcaataaataaggatattataatggaaaaaaataataaat 41038538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 8947020 - 8947231
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||| ||||||||||||| ||||  |||||||  ||||||||||||||| |||||||||||  ||||||||||| |||||||||||||||  |||||    
T  8947020 aatattaatcgtttaaagtttgtgcataattattaaggaaatgattaattgtgttgatttcaatgataaaattagtaatatttactaaaacatccttatt 8947119  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaa 205  Q
    |||| |||||||||||  | ||||||||||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||||| |||  |||||||    
T  8947120 aattatagttagtggagtagttaagttggatgaaattcaataaataagggtataata-atgaaaaaaataataaatattgcattggtattg--ttgtaaa 8947216  T
Q  206 gtgacaattactttg 220  Q
     ||||||||| ||||    
T  8947217 atgacaattattttg 8947231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 5789616 - 5789824
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||| ||||| |||| |||||||||||||  |||||||||||||||||||| |||||||||||||||||| | |||||||||||||   |||||    
T  5789616 aatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagtggcatttactaaaacacccttatt 5789715  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaa 205  Q
    |||||||||||||| || | ||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||  ||||||| |     ||||||||    
T  5789716 aattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagtggaaa-aaataataaatgatgcattgat-----attgtaaa 5789809  T
Q  206 gtgacaattactttg 220  Q
    |||||||||| ||||    
T  5789810 gtgacaattattttg 5789824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 35314033 - 35313849
Alignment:
Q  6 aatattagtcgtttaaagtttt-tgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttat 104  Q
    |||||||||||||||||  ||  |||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||||||||| |||| ||   ||||    
T  35314033 aatattagtcgtttaaatattgatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagtatttattaaagcaaccttat 35313934  T
Q  105 taattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
    |||||||||||||||||  | ||||||| |||||||||||||||||||  |||||||||| |||| || |||||||| |||||||    
T  35313933 taattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggaaaaaagtaataaatgttgcatt 35313849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 34120416 - 34120591
Alignment:
Q  15 cgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagt 114  Q
    |||||||||||| |||| ||||||||   |||||||||||||| |||||||  || |||||| ||||| ||||||||||||  |||||||||||||||||    
T  34120416 cgtttaaagtttatgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaactagtattatttactaaaa--tatttattaattgtagt 34120513  T
Q  115 tagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||| | ||||||||||||||||||||||| |||  |||||||| | |||| |||||||||||  |||||||||    
T  34120514 tagtggaatagttaagttggatgaaattcaataagtaagagtataataatggaaaaaaataataaatgctgcattggt 34120591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 43115775 - 43115945
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||| |||||||||||  |||| ||||||| ||||||||||| |   ||||| ||||    
T  43115775 tagtcgtttaaagtttgtgcgcgattattaaagaaatgattaattgtgttgatttcaatgataaagttagtagcatttactaaaatactcttatttattg 43115874  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    |||||||||||  | |||||||| |||||||||||  ||||| ||||||||| | |||| |||||||||||    
T  43115875 tagttagtggagtagttaagttgaatgaaattcaacgaataatggtataataatggaaaaaaataataaat 43115945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 17695467 - 17695303
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    |||||||| |||| |||||||||||||  ||||||||||||||||||||||||||| ||||||||  ||  |||||| |||| ||  ||||||||| |||    
T  17695467 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattgatatcatttacaaaaatattcttattaattatag 17695368  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataa 179  Q
    ||||| ||  | ||||||||||||||||||||||||||| ||||||||||| |||| |||||||||    
T  17695367 ttagtagagtagttaagttggatgaaattcaataaataagggtataatagtggaaa-aaataataa 17695303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 34225725 - 34225549
Alignment:
Q  16 gtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtt 115  Q
    |||||| |||| |||||||||||||  ||||||| ||||| ||||||||| ||| ||||| |||||| ||||||||||||||   |||||||||||||||    
T  34225725 gtttaaggtttgtgcacgattattaaggaaatgaataattatattgattttaatggtaaacttagtattatttactaaaacacccttattaattgtagtt 34225626  T
Q  116 agtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    | ||||  | |||||||| |||||||| ||||||||| ||||||||| |  ||| |||||||||||| |||||||||    
T  34225625 aatggagtatttaagttgaatgaaatttaataaataagggtataataatgaaaaaaaataataaatactgcattggt 34225549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 35242309 - 35242451
Alignment:
Q  50 ttaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaa 149  Q
    |||||||| ||||||| |||  ||||||||| |  |||||||| || |||||||||||||||||||||| ||  | ||||||||||||||||||||||||    
T  35242309 ttaattgtgttgattttaatgttaaaattagaatcatttactagaatatatttattaattgtagttagttgagtagttaagttggatgaaattcaataaa 35242408  T
Q  150 taaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||| ||||||||||  |||| |||||||||||||||||||||    
T  35242409 taaaagtataatagtgaaaactaataataaatattgcattggt 35242451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 14523345 - 14523524
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||||||||||||| |||| | ||||||  |||||||||  |||| ||||||||||| ||||||||| ||  ||||||||||| ||  ||||||||||    
T  14523345 tagtcgtttaaagtttatgcaaggttattaaggaaatgattttttgtgttgatttcaatggtaaaattaatatcatttactaaaatatccttattaattg 14523444  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||||||||||  | ||||||| ||||||||||||| ||||| | ||||||| | ||||  |||||||||| ||||||||    
T  14523445 tagttagtggagtagttaagttagatgaaattcaattaataaggatataataatggaaaataataataaatgttgcattg 14523524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 36354411 - 36354596
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||| ||||| |||| || ||||||||||  ||||||| || |||| |||||||  || |||||||||||| |||||| | |||||   |||||    
T  36354411 aataatagtcatttaaggtttatgtacgattattaaggaaatgactagttgtgttgattttgatggtaaaattagtattatttattgaaacactcttatt 36354510  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||| ||||||||| | |||| |||||||||||  |||||||||    
T  36354511 aattgtagttagtggagtagttaagttggatgaaattcaataaataatggtataataatggaaa-aaataataaattctgcattggt 36354596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 45235726 - 45235580
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| |||||||||||||  ||||||||| ||||| ||||||||||| ||||||||| ||  |||||||||||||   |||||    
T  45235726 aataatagtcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaacacccttatt 45235627  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    ||||||||||| || || | ||||||| |||||||||||||||||||    
T  45235626 aattgtagttaatgaaatagttaagtttgatgaaattcaataaataa 45235580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 164
Target Start/End: Original strand, 16377624 - 16377786
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||| ||||||||  ||| ||||||||||||| |||||||||||||||| |||||| |||| ||||||||| ||  |||||| |||| |   |||||    
T  16377624 aatattaatcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattacaatggtaaaattaatatcatttaccaaaataaccttatt 16377723  T
Q  106 aattgtagttagtgga----acaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    ||||||||||||||||      |||||||||||||||||||||||||||||| ||||||||||    
T  16377724 aattgtagttagtggagtagttaattaagttggatgaaattcaataaataaaagtataatagt 16377786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 16806021 - 16805880
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||| |||||| |||| ||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||  ||||||||||| ||  ||||||||||    
T  16806021 tagtagtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtatcatttactaaaatatccttattaattg 16805922  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    |||||||||||    ||||||||||| ||||| |||| ||||    
T  16805921 tagttagtggagttgttaagttggattaaatttaatagataa 16805880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 16845302 - 16845161
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||| |||||| |||| ||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||  ||||||||||| ||  ||||||||||    
T  16845302 tagtagtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtatcatttactaaaatatccttattaattg 16845203  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    |||||||||||    ||||||||||| ||||| |||| ||||    
T  16845202 tagttagtggagttgttaagttggattaaatttaatagataa 16845161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 3323254 - 3323426
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||              | |||||||    
T  3323254 aatattagtcgtttaaggtttgtgcacgattattataaaaatgattaattgtgttgatttcaatggtaaaattagta--------------acatttatt 3323339  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||||||||  | ||||||||||||||||||||||| |||  || ||||||| | || |||||||||||  |||||||||    
T  3323340 aattgtagttagtggagtagttaagttggatgaaattcaataagtaagagtgtaatagtgggaaaaaataataaatgctgcattggt 3323426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 37322569 - 37322399
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaa-tgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaatt 109  Q
    ||||||||||| |||| |||||||||||||  |||| ||||| ||||| ||||||||||| ||||||||| ||  ||||| ||||| |   |||||||||    
T  37322569 tagtcgtttaaggtttatgcacgattattaaggaaaatgattgattgtgttgatttcaatggtaaaattaatatcatttattaaaatacccttattaatt 37322470  T
Q  110 gtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||||||||||  | ||||||| ||||||||||||||||||| ||||||||| | |||| |||||||||||    
T  37322469 gtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaa-aaataataaat 37322399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 43410566 - 43410388
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||| ||||| |||| |||||||||||||  ||||| ||||||||| ||||| |||||  |||||||| ||  ||||||||||| ||  ||||||||||    
T  43410566 tagtcctttaatgtttgtgcacgattattaaggaaattattaattgtgttgatatcaatgataaaattaatatcatttactaaaatatccttattaattg 43410467  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
    |||||| ||||  | |||||||| |||||||||||||||| |  |||||||| | |||| ||||||||||| |||||||    
T  43410466 tagttaatggagtagttaagttgaatgaaattcaataaatgagagtataataatggaaaaaaataataaatgttgcatt 43410388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 16463834 - 16463662
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| |||||| ||||||  ||||||||||||||| |||||||  || ||||||||||||  |||||||||||||   |||||    
T  16463834 aataatagtcgtttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 16463735  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataa 179  Q
    ||||||||||||||||  | | ||||| ||||||||| ||||||||| |||| |||| | |||| |||||||||    
T  16463734 aattgtagttagtggagtagtaaagtttgatgaaatttaataaataatggtaaaataatggaaa-aaataataa 16463662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 31448666 - 31448812
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagt-atttactaaaacatatttattaatt 109  Q
    ||||||||||| |||| |||||||||||||  ||||||||||||||| |||||||  || |||||||||| ||| |||||||||||||   ||| |||||    
T  31448666 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattag-agtcatttactaaaacacccttactaatt 31448764  T
Q  110 gtagttagtggaacaattaagttggatgaaattcaataaataaaggta 157  Q
    | |||||||| || | ||||||||||||||||||||||||||| ||||    
T  31448765 gcagttagtgaaatagttaagttggatgaaattcaataaataagggta 31448812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 39691627 - 39691460
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    |||||||| |||| |||||||||||||   |||||||||||||| |||||||||||  |||||||| ||  ||||||||||| |   |||||||||| ||    
T  39691627 tcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatgataaaattaatatcatttactaaaatactcttattaattgcag 39691528  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||||||  | | |||||| |||||||||||||||||| ||||||||| | ||||  ||||||||||    
T  39691527 ttagtggagtagtaaagttgaatgaaattcaataaataagggtataataatggaaaataataataaat 39691460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 154
Target Start/End: Original strand, 17346356 - 17346478
Alignment:
Q  31 acgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaag 130  Q
    |||||||||| |||||| ||||||| | |||||||||| |||||||||| ||  ||||| ||||| || ||||||||||||||||||||||  | |||||    
T  17346356 acgattattaaagaaat-attaattattttgatttcaaaagtaaaattaatatcatttattaaaatatttttattaattgtagttagtggagtagttaag 17346454  T
Q  131 ttggatgaaattcaataaataaag 154  Q
    ||||| ||||||||||||||||||    
T  17346455 ttggaagaaattcaataaataaag 17346478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 25637625 - 25637439
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||| |||||| |||| ||||||||||| |  ||||||||||||||| |||||||  || |||||||||||   |||||||||||||  ||||||    
T  25637625 aataatagttgtttaaggtttatgcacgattataag-gaaatgattaattgtgttgattttgatggtaaaattagtgtcatttactaaaacacctttatt 25637527  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcattggt 192  Q
    |||||||||||  |||  | ||||||||||||||||| ||||||||| ||| ||||| | | ||| |||||||||||  |||||||||    
T  25637526 aattgtagttataggagtagttaagttggatgaaatttaataaataagggtgtaataatggaaaaaaaataataaatgctgcattggt 25637439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 39785733 - 39785544
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtat---ttactaaaacatattt 102  Q
    |||| ||||||||||| |||  |||||| ||||||  ||||||||||||||| |||||||  || |||||||||||| |||   |||||||||||   ||    
T  39785733 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtactatcatttactaaaacactctt 39785634  T
Q  103 attaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||||||| ||||  | |||||||||||||| |||||||||||| ||||| ||| | | || ||||| |||||  |||||||||    
T  39785633 attaattgtagttaatggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaaaatagtaaatgctgcattggt 39785544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 28170568 - 28170726
Alignment:
Q  23 gtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaa 122  Q
    |||| ||||||| ||||  | |||||||||||| | ||||||||||  ||||||||||| | ||||||||  |||  ||||||||||||||||| | |||    
T  28170568 gtttgtgcacgagtatttaaaaaatgattaattatgttgatttcaagggtaaaattagttgcatttactagtacagctttattaattgtagttaatagaa 28170667  T
Q  123 caattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
     |||||| ||||||||||||| ||||||||  ||||||||||  ||| |||||||||||    
T  28170668 taattaaattggatgaaattctataaataagagtataatagtgaaaaaaaataataaat 28170726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 39329629 - 39329805
Alignment:
Q  6 aatattagtcgtttaaagtttt-tgcacgattattatagaaatgattaattgt--attgatttcaatagtaaaattagtagtatttactaaaacatattt 102  Q
    |||||||||||||||| ||||| |||||||||  ||   ||||||| ||||||  ||||||||||||  |||||||| ||| |||||||||||||   ||    
T  39329629 aatattagtcgtttaacgttttgtgcacgatttctaagaaaatgatcaattgtgtattgatttcaatgataaaattaatagcatttactaaaacactctt 39329728  T
Q  103 attaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    |||||||||||||| ||||  | |||| |||||||||||||||||||||| | || |||||| |||| |||||||||||    
T  39329729 attaattgtagtta-tggagtagttaaattggatgaaattcaataaataacgatacaatagtggaaa-aaataataaat 39329805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 36794429 - 36794243
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||||||||  ||  |||| | ||||||  ||||||||||||||| |||||||  || ||||||||||||   |||||||||||    |||||    
T  36794429 aataatagtcgtttaagattgatgcatggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcttttactaaaacgcccttatt 36794330  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    || |||||||||||||  | |||||||||||||| |||||||||||| ||||| ||| |  ||| |||||||||||  |||||||||    
T  36794329 aactgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatgaaaaaaaataataaatgctgcattggt 36794243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 158
Target Start/End: Original strand, 15359055 - 15359207
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaa-atgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttat 104  Q
    |||| ||||||||||| |||  |||||| |||||| |||| |||||||||||| |||||||  ||  |||||||| ||  |||||||||||||   ||||    
T  15359055 aataatagtcgtttaaggttgatgcacggttatta-agaagatgattaattgtgttgattttgatgataaaattaatatcatttactaaaacacccttat 15359153  T
Q  105 taattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtat 158  Q
    |||||||||||||||||  | |||||||||||||| |||||||||||| |||||    
T  15359154 taattgtagttagtggagtagttaagttggatgaagttcaataaataagggtat 15359207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 19937817 - 19937733
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaa 95  Q
    ||||||||||| |||| |||||||||||||  ||||||||||||||| ||||||||||| ||||||||| ||  |||||||||||    
T  19937817 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaa 19937733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 5272204 - 5272289
Alignment:
Q  103 attaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||||| ||||||||| | | || ||||||||||| |||||||    
T  5272204 attaattgtagttagtggagtaattaaattggatgaaattcaataaataagggtataataatgggaa-aaataataaatgttgcatt 5272289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 34451341 - 34451459
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||| ||||||| | |||||||| ||   |||||||||| |||||||||||| || || ||||||| |||||| || || | || |||||||||||||||    
T  34451341 aaattattaattatgttgatttcgatgagaaaattagtattatttactaaaatattttcattaattctagttattgaaatagtttagttggatgaaattc 34451440  T
Q  144 aataaataaaggtataata 162  Q
    |||||||||||| ||||||    
T  34451441 aataaataaaggcataata 34451459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 43699605 - 43699722
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||| ||| ||||||||||||||||||||||||  ||||| ||||| | |  ||||||||    ||||||||  ||||||||||||| ||||||    
T  43699605 aaatgattaactgtgttgatttcaatagtaaaattagtatcatttattaaaatacacctattaatt---tttagtggagtaattaagttggataaaattc 43699701  T
Q  144 aataaataaaggtataatagt 164  Q
    |||||| || |||||||||||    
T  43699702 aataaacaagggtataatagt 43699722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 158
Target Start/End: Original strand, 11742497 - 11742648
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgatt-aattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttat 104  Q
    |||||||||||||||| |||| ||||||||||||| ||||||  || ||||||||||||||  || ||||| | | || |||||| |||||||   ||||    
T  11742497 aatattagtcgtttaacgtttatgcacgattatta-agaaattttttaattgtattgattttgatggtaaa-tcaatattatttattaaaacacccttat 11742594  T
Q  105 taattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtat 158  Q
    |||||||||||| ||||  | ||||||| |||||| |||||||||||| |||||    
T  11742595 taattgtagttaatggagtagttaagtttgatgaagttcaataaataagggtat 11742648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 26863404 - 26863489
Alignment:
Q  84 tatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaa 169  Q
    |||||| |||||||  ||||||||||||||||||||||  | |||||| |||||||||||| |||||||| |||||||||| ||||    
T  26863404 tatttattaaaacacttttattaattgtagttagtggagtagttaagtcggatgaaattcattaaataaatgtataatagtggaaa 26863489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 9458329 - 9458419
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||||||||||||||  | | ||||||||||||||| ||||||||| ||||||||| | |||| |||||||||||  |||||||||    
T  9458329 ttattaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggtataataatggaaa-aaataataaatgctgcattggt 9458419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 19937435 - 19937374
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||||||||||||||||||  | |||||||| || |||||||||||||||||||||||||    
T  19937435 ttattaattgtagttagtggagtagttaagttgaataaaattcaataaataaaggtataata 19937374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 32831203 - 32831296
Alignment:
Q  66 caatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtata 159  Q
    |||| ||||||||| ||  |||||||||||||| ||||||||||||||||| ||||  | |||| |  ||||||||||||||||||| ||||||    
T  32831203 caatggtaaaattaatatcatttactaaaacatctttattaattgtagttattggagtagttaaatgagatgaaattcaataaataatggtata 32831296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 41220954 - 41221058
Alignment:
Q  46 atgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaa 145  Q
    |||||||||||| |||||||||||  |||||||||||  ||||| ||||| || ||||||||||||||||| || |  | ||||||  |||||| |||||    
T  41220954 atgattaattgtgttgatttcaattataaaattagtatcatttattaaaatatttttattaattgtagttaatgaagtagttaagtcagatgaagttcaa 41221053  T
Q  146 taaat 150  Q
    |||||    
T  41221054 taaat 41221058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 152
Target Start/End: Original strand, 18853168 - 18853315
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaa--aattagtagtatttactaaaacatattta 103  Q
    |||| |||||||||||| ||| ||||||||  |||  ||||| ||||||||| |||||||||||  |||  |||| |||  |||||| |||| |   |||    
T  18853168 aataatagtcgtttaaaatttgtgcacgatctttaaggaaataattaattgtgttgatttcaatgataattaatt-gtatcatttaccaaaatactctta 18853266  T
Q  104 ttaattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    ||| ||||||||||| ||  |||||| ||||||||||||||||||||||    
T  18853267 ttagttgtagttagtagagtaattaatttggatgaaattcaataaataa 18853315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 39443858 - 39443789
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaa 75  Q
    |||||||||||||||| |||| ||||| |||||||   |||||||||||| | |||||||||||||||||    
T  39443858 aatattagtcgtttaaggtttgtgcacaattattaagaaaatgattaattttgttgatttcaatagtaaa 39443789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 1206709 - 1206781
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtta 116  Q
    |||||||||||| | ||||||||| | ||||||||||||  ||||||||||| ||  ||||||||||||||||    
T  1206709 aaatgattaattatgttgatttcagtggtaaaattagtaacatttactaaaatatccttattaattgtagtta 1206781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 19444225 - 19444107
Alignment:
Q  72 taaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaaca 171  Q
    |||||||| || ||||||||||||  |  |||||||||||| ||||| ||  | ||||| ||||| || ||||||||| || ||||||||| |  ||| |    
T  19444225 taaaattaatattatttactaaaatgttattattaattgtaattagtcgagtagttaagatggataaatttcaataaacaagggtataataatgtaaaaa 19444126  T
Q  172 aataataaatattgcattg 190  Q
    |||||||||| ||||||||    
T  19444125 aataataaatgttgcattg 19444107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 26607946 - 26608008
Alignment:
Q  16 gtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaatt 78  Q
    |||||| |||| |||||||||||||   |||||||||||||| ||||||||||| ||||||||    
T  26607946 gtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaatt 26608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 7494909 - 7494962
Alignment:
Q  109 tgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||| |||  | ||||||||||||||||||||||||||| |||||||||    
T  7494909 tgtagttagcggagtagttaagttggatgaaattcaataaataagggtataata 7494962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 181
Target Start/End: Complemental strand, 19426577 - 19426428
Alignment:
Q  30 cacgattattatagaaatgattaattgtattgattt-caatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaatta 128  Q
    ||||||| | || ||||||||||||||| ||||||| ||||  ||||||||| |  ||||||||||| ||  |||||||||||||| ||| ||  | |||    
T  19426577 cacgattttaattgaaatgattaattgtgttgattttcaatgataaaattagcaacatttactaaaatatcattattaattgtagtaagtcgagtagtta 19426478  T
Q  129 agttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    |||||||| || ||  ||||| || ||||||||||| | || |||||||||||    
T  19426477 agttggataaagtt--ataaacaacggtataatagtgggaa-aaataataaat 19426428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 36173424 - 36173488
Alignment:
Q  125 attaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||  ||||||||||  |||||||    
T  36173424 attaagtttaatgaaattcaataaataaaagtataatagttgaaa-taataataaatgatgcattg 36173488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 27501506 - 27501582
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagta 82  Q
    |||||| ||||||||| |||| || | ||||||||  |||||||| |||| | ||||||||||| ||||||||||||    
T  27501506 aatattcgtcgtttaaggtttgtgtatgattattaaggaaatgataaattatgttgatttcaatggtaaaattagta 27501582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 7438940 - 7438995
Alignment:
Q  126 ttaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    |||||||| |||||||||||||||||| ||||||||||| | |  |||||||||||    
T  7438940 ttaagttgaatgaaattcaataaataagggtataatagtgggacaaaataataaat 7438995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 10005130 - 10005197
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgt 111  Q
    ||||||| |||||| |||||||||  | |||||||||||  ||||||||||| || ||||||||||||    
T  10005130 aaatgatcaattgtgttgatttcagcaataaaattagtatcatttactaaaatatctttattaattgt 10005197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 32783471 - 32783404
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgt 111  Q
    |||||||||||||| || ||||  |||||||||||| ||  |||||||||||||  ||||||||||||    
T  32783471 aaatgattaattgtgtttattttgatagtaaaattaatatcatttactaaaacacctttattaattgt 32783404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 25904815 - 25904757
Alignment:
Q  124 aattaagttggatgaaattcaataaataaaggtataatagttgaaaca-aataataaat 181  Q
    |||||||||| |||||||||||||||| | ||||||||||| |||| | ||||||||||    
T  25904815 aattaagttgaatgaaattcaataaattagggtataatagtggaaaaataataataaat 25904757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 16028330 - 16028278
Alignment:
Q  136 tgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
    |||||||||||||||||| ||||||||| ||||| |||| |||||| |||||||    
T  16028330 tgaaattcaataaataaatgtataatag-tgaaaaaaattataaatgttgcatt 16028278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 33989 - 34197
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||| ||||| |||| |||||||||||||  |||||||||||||||||||| |||||||||||||||||| | |||||||||||||   |||||    
T  33989 aatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagtggcatttactaaaacacccttatt 34088  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaa 205  Q
    |||||||||||||| || | ||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||  ||||||| |     ||||||||    
T  34089 aattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagtggaaa-aaataataaatgatgcattgat-----attgtaaa 34182  T
Q  206 gtgacaattactttg 220  Q
    |||||||||| ||||    
T  34183 gtgacaattattttg 34197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 4e-53; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 215
Target Start/End: Complemental strand, 34360800 - 34360596
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||   |||||    
T  34360800 aatattaatcgtttaaagtttgtgcacgattattaaagaaatgattaattgtattgatttcaatggtaaaattagtagcatttactaaaacactcttatt 34360701  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaa 205  Q
    ||||||||||||||||  | |||||||| || ||||||||||||||| ||||||||||| |||| ||| || |||| ||  ||||||     ||||||||    
T  34360700 aattgtagttagtggagtagttaagttgaataaaattcaataaataagggtataatagtggaaaaaaaaaaaaaatgttaaattggt-----attgtaaa 34360606  T
Q  206 gtgacaatta 215  Q
    ||||||||||    
T  34360605 gtgacaatta 34360596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 6 - 169
Target Start/End: Original strand, 6643636 - 6643799
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||| |||||| ||||  ||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  6643636 aatattagtagtttaatgtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacatctttatt 6643735  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaa 169  Q
    ||||||||||||||| | | ||||||||||||||||||||||||||| ||||||||||| ||||    
T  6643736 aattgtagttagtggtatagttaagttggatgaaattcaataaataagggtataatagtggaaa 6643799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 7061640 - 7061824
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| | |||||||||||  ||||||||||||||| ||||||||||| ||||||||||||  |||||||| || || ||||||    
T  7061640 aatattagtcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactataatatctttatt 7061739  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||| |||||||||||  ||| ||||||||||| ||| ||||    
T  7061740 aattgtagttagtggattaattaagttgaatgaaattcaataaataagggtataatagtgaaaataaataataaatgttgtattg 7061824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 47464341 - 47464528
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| ||||  ||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| |   |||||    
T  47464341 aatattagtcgtttaaggtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaaactcttatt 47464440  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcattggt 192  Q
    |||||||||| |||||  | ||||||||||||||||||||||||||| ||||||||||| | ||| |||||||||||| |||||||||    
T  47464441 aattgtagttggtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaataatgcattggt 47464528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 49428323 - 49428502
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| ||||||||||||||||||  |||||||||| |||| ||||||||||| ||||||||| ||  ||||||||||| |   ||||||||||    
T  49428323 tagtcgtttaaggtttttgcacgattattaaggaaatgattatttgtgttgatttcaatggtaaaattaatataatttactaaaatacccttattaattg 49428422  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||||||||| | |||| || |||||||| ||||||||    
T  49428423 tagttagtggagtaattaagttggatgaaattcaataaataagggtataataatggaaaaaagtaataaatgttgcattg 49428502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 22130192 - 22130001
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtat----tgatttcaatagtaaaattagtagtatttactaaaacatatt 101  Q
    |||||||||||||||| |||| |||||| ||||||  |||||||||||||||||    |||||||||| ||| ||||||||  |||||| |||||||  |    
T  22130192 aatattagtcgtttaaggtttgtgcacggttattaaggaaatgattaattgtatgtgttgatttcaatggtataattagtatcatttacaaaaacatcct 22130093  T
Q  102 tattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcattggt 192  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | | ||| ||||||||||| ||||||||||    
T  22130092 tattaattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataataatggaaaaaaaataataaatgttgcattggt 22130001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 35311199 - 35311410
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||  ||||||| |||| |||||||||||||  ||||||||||||| | || |||||||| ||||||||| | | |||||||| ||||   |||||    
T  35311199 aatattaagcgtttaaggtttgtgcacgattattaaggaaatgattaattatgttaatttcaatggtaaaattaattgcatttactagaacactcttatt 35311298  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaaca--aataataaatattgcattggtgttgcattgta 203  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||| |  |||||||||| ||||||||||     ||||||    
T  35311299 aattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataatattggaaaaaataataataaatgttgcattggt-----attgta 35311393  T
Q  204 aagtgacaattactttg 220  Q
    |||||||||||| ||||    
T  35311394 aagtgacaattattttg 35311410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 43237388 - 43237216
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||||||||||||  ||||||||||||||| || |||||||| |||||||||||| |||||||||||| ||  |||||    
T  43237388 aatattagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgtttatttcaatggtaaaattagtaatatttactaaaaaatcattatt 43237289  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataa 179  Q
    |||| ||||||||| |  | |||||||||||||||||||||||||||  ||||||||| ||||| |||||||||    
T  43237288 aattatagttagtgaagtagttaagttggatgaaattcaataaataagtgtataatag-tgaaaaaaataataa 43237216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 32884946 - 32884783
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||||||||||||   |||||||||||||| ||||||||||| ||| ||||||||| ||||| |||||||   |||||    
T  32884946 aatattagtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtagaattagtagcatttagtaaaacactcttatt 32884847  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaa 169  Q
    ||||||||||||||||  | |||||||||||| |||||||||||||| | ||||||||| ||||    
T  32884846 aattgtagttagtggagtagttaagttggatggaattcaataaataaggatataatagtggaaa 32884783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 17237272 - 17237448
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||| ||||| |||| |||| ||||||||   |||| ||||||||| |||||| |||| ||||||||||||  |||||||||||||   |||||    
T  17237272 aatactagtcatttaaggtttgtgcatgattattaagaaaataattaattgtgttgattgcaatggtaaaattagtaacatttactaaaacaaccttatt 17237371  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaata 182  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  17237372 aattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaactaataaata 17237448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 38405083 - 38405263
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||| |||||||||||||  ||||||||||||| | ||||||| ||| ||||||||| ||  ||||||||||| |   ||||||||||    
T  38405083 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattctgttgatttaaatggtaaaattaatatcatttactaaaatacccttattaattg 38405182  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaa-taataaatattgcattg 190  Q
    ||||||||||   | ||||||||||||||||||||||||||||||||||||| | |||| ||| |||||||| ||||||||    
T  38405183 tagttagtggtgtagttaagttggatgaaattcaataaataaaggtataataatggaaaaaaagtaataaatgttgcattg 38405263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 40122830 - 40123017
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||||||||||  ||| |||||||||||||  ||||||||||||||  ||||||| |||  |||||||||||| |||||||||||||   |||||    
T  40122830 aatattagtcgtttaagctttgtgcacgattattaaggaaatgattaattgcgttgattttaatgttaaaattagtagcatttactaaaacacccttatt 40122929  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt-tgaaacaaataataaatattgcattggt 192  Q
     ||||||||||||||| || ||||||| || |||||||||||||||| |||| ||| ||  |||| ||||||||||| ||||||||||    
T  40122930 gattgtagttagtggagcagttaagttcgacgaaattcaataaataagggtacaatggtgggaaaaaaataataaatgttgcattggt 40123017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 49747105 - 49746896
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||| || || | || ||||||||||||| | |||| ||||||||| |||||||||||  |||||||||||||||||||||||| |  || |||    
T  49747105 aatattagtcattcaaggcttgtgcacgattattaaa-aaataattaattgtgttgatttcaatgataaaattagtagtatttactaaaataccttcatt 49747007  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaaca-aataataaatattgcattggtgttgcattgtaa 204  Q
    |||| |||||||| ||  | ||||||||||||||||||||||||||| ||||||||| | |||| | |||||||||| ||||||||||     |||||||    
T  49747006 aattatagttagttgagtagttaagttggatgaaattcaataaataagggtataataatggaaaaataataataaatgttgcattggt-----attgtaa 49746912  T
Q  205 agtgacaattactttg 220  Q
    ||||||||||| ||||    
T  49746911 agtgacaattattttg 49746896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 6609898 - 6609722
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    ||||||||||||| |||||||||||||  ||||||||||||||| |||||||  || ||||||||||||  |||||| ||||||| |||||||||||||     
T  6609898 tcgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttacaaaaacatctttattaattgtaa 6609799  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcatt 189  Q
    ||| ||||  | ||||||||||||||| |||||||||||  |||||||| | | ||| ||||||||||| |||||||    
T  6609798 ttattggagtagttaagttggatgaaactcaataaataagagtataataatggaaaaaaaataataaatgttgcatt 6609722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 16821310 - 16821494
Alignment:
Q  9 attagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaat 108  Q
    ||||||||||||| |||| |||||||||||||  | ||||||||||||| |||||||||||  |||||||||||  |||||||| || ||  ||||||||    
T  16821310 attagtcgtttaaggtttgtgcacgattattaatgcaatgattaattgtgttgatttcaatgataaaattagtatcatttactataatatccttattaat 16821409  T
Q  109 tgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaaca-aataataaatattgcattggt 192  Q
    | |||||||||||  | |||||||| |||||||||||||||||| |||||||||||  ||| | ||||||||||  |||||||||    
T  16821410 tatagttagtggagtatttaagttgaatgaaattcaataaataagggtataatagtgcaaaaataataataaatgctgcattggt 16821494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 35380333 - 35380496
Alignment:
Q  30 cacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaa 129  Q
    |||||||||||   |||||||||||| | ||||||| ||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||    ||||    
T  35380333 cacgattattaagaaaatgattaattatgttgattttaatggtaaaattagtagcatttactaaaacatcattattaattgtagttagtggagtggttaa 35380432  T
Q  130 gttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcattggt 192  Q
    |||||||||||||||||||||||  |||||||| | | ||| ||||||||||| ||||||||||    
T  35380433 gttggatgaaattcaataaataagagtataataatggaaaaaaaataataaatgttgcattggt 35380496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 11907575 - 11907761
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||| ||||| |||  |||||||||||||  ||||||||||||||| |||||||  || ||||||||||||  |||||||||||||   |||||    
T  11907575 aataatagtcatttaaggttaatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 11907674  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||| ||||  | |||||||||||||| ||||||||||||| |||| ||| | |||| |||||||||||  |||||||||    
T  11907675 aattgtagttattggagtagttaagttggatgaagttcaataaataaatgtattataatggaaaaaaataataaatgctgcattggt 11907761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 42616884 - 42617062
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||||||||  ||| |||| |||||||| |||||||||||| ||| ||||||||||| ||||||||| ||  ||||||||||| || |||||||||||    
T  42616884 tagtcgtttaagttttgtgcatgattattaaagaaatgattaactgtgttgatttcaatggtaaaattaatatcatttactaaaatatttttattaattg 42616983  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
    |||| ||||||  | |||||| | ||||||||||||||||||  |||||||| | ||||  |||||||||| |||||||    
T  42616984 tagtaagtggagtagttaagtcgaatgaaattcaataaataagtgtataataatggaaaataataataaatgttgcatt 42617062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 2942621 - 2942793
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |  | |||||||| |||||||||||||||| |||||||| ||  |||||||||||| |||||||||||||   |||||    
T  2942621 aatattagtcgtttaaggtttgtataagattattaaagaaatgattaattgtgttgatttcgatgataaaattagtagcatttactaaaaca-ccttatt 2942719  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataa 179  Q
    ||||||||||||||||    |||||||| ||||| ||||||||| |||| ||||||||| |||| |||||||||    
T  2942720 aattgtagttagtggagtggttaagttgaatgaatttcaataaacaaagatataatagtggaaaaaaataataa 2942793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 2066934 - 2066778
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| |||||||||||||  ||||||||||||||| |||||||  || ||||| |||||| |||||| |||||||   |||||    
T  2066934 aataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaagttagtattatttattaaaacacccttatt 2066835  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||| ||||||||||   | ||||||| |||||||||||||||||||||||||||||    
T  2066834 aattttagttagtggggtagttaagttagatgaaattcaataaataaaggtataata 2066778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 162
Target Start/End: Original strand, 33790707 - 33790863
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| |||||||||||||   |||||||||||||| |||||||  || |||||||||||   |||| ||||||||   |||||    
T  33790707 aataatagtcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtttcatttgctaaaacacccttatt 33790806  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||| |||||||||    
T  33790807 aattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataata 33790863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 164
Target Start/End: Complemental strand, 53412211 - 53412095
Alignment:
Q  48 gattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaata 147  Q
    |||||||| ||||||||||||| ||||||||||||  ||||||||||| || |||||||||| ||||| |||||| | ||||||||||||||||||||||    
T  53412211 gattaattttattgatttcaatggtaaaattagtatcatttactaaaatatttttattaattatagtttgtggaatagttaagttggatgaaattcaata 53412112  T
Q  148 aataaaggtataatagt 164  Q
    |||||| ||||||||||    
T  53412111 aataaaagtataatagt 53412095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 169
Target Start/End: Original strand, 44536172 - 44536334
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||| | ||||||||||| |||||||||||||  ||||||||||||||| ||||||| ||| |||||||||| || ||||| |||||||   |||||    
T  44536172 aatattaattgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttaatggtaaaattagcaggatttattaaaacacccttatt 44536271  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaa 169  Q
    ||||||||||||||||  |  |||||| |||||||||||| |||||| ||||||||||| ||||    
T  44536272 aattgtagttagtggagtagctaagttagatgaaattcaa-aaataagggtataatagtggaaa 44536334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 43 - 161
Target Start/End: Complemental strand, 36985894 - 36985776
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    ||||||||||||||| ||||||||||| ||||||||||||  ||||||||||| |    ||||||||||||||||| ||| |||||||||||||||||||    
T  36985894 gaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaaatacccgtattaattgtagttagtagaataattaagttggatgaaatt 36985795  T
Q  143 caataaataaaggtataat 161  Q
    |||||||||| ||||||||    
T  36985794 caataaataagggtataat 36985776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 47772995 - 47773181
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||  |||||  ||||||  ||||| ||||||||| |||||||  || ||||||||||||  |||||||||||||   |||||    
T  47772995 aataatagtcgtttaaggttgatgcacagttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 47773094  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||||||||  | |||||||||||||| |||||||||||| ||||| ||| | |||| |||||||||||  |||||||||    
T  47773095 aattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatggaaaaaaataataaatgctgcattggt 47773181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 188
Target Start/End: Complemental strand, 3689707 - 3689525
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| || ||| |||||| ||||||||||||||||||||||||  || ||||||||||||  |||||||||||||   |||||    
T  3689707 aataatagtcgtttaaggtttatgtacggttattaaagaaatgattaattgtattgattttgatggtaaaattagtatcatttactaaaacactcttatt 3689608  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcat 188  Q
    |||| |||||||| ||    ||||||| ||||||||| ||| ||||| ||||||||| | ||||  |||||||||| ||||||    
T  3689607 aattatagttagttgagttgttaagttagatgaaattaaattaataagggtataataatggaaaataataataaatgttgcat 3689525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 180
Target Start/End: Complemental strand, 17114585 - 17114411
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||  |||||  ||||||  ||||||||||||||| |||||||  || ||||||||||||  |||||||||||||   |||||    
T  17114585 aataatagtcgtttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 17114486  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaa 180  Q
    ||||||||||||||||  | |||| ||||| ||| |||||||||||||||||| ||| | |||| ||||||||||    
T  17114485 aattgtagttagtggagtagttaatttggaggaagttcaataaataaaggtattataatggaaaaaaataataaa 17114411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 52859775 - 52859956
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||| |||| | || |||||||||||||  ||||||||||||||| |||||||  || ||||||||||||  ||||||||||||||  |||||    
T  52859775 aataatagtcgcttaaggcttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacatccttatt 52859874  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||||||||  | |||||||| ||||||||||||     | ||||||||| | | || ||||||||||| ||||||||||    
T  52859875 aattgtagttagtggagtagttaagttgaatgaaattcaat-----agggtataataatgggaaaaaataataaatgttgcattggt 52859956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 5841408 - 5841588
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||| ||||| | |||||  ||||||||| ||||  ||||||| ||| ||||||||| ||  ||||||||||| |   ||||||||||    
T  5841408 tagtcgtttaaggtttgtgcacaactattaaggaaatgattgattgcgttgattttaatggtaaaattaatatcatttactaaaatacccttattaattg 5841507  T
Q  111 tagttagtggaacaatt-aagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||||||||||  | || ||||||||||||||||||||||||||||||||||| | ||||  ||||||||||  |||||||    
T  5841508 tagttagtggagtagtttaagttggatgaaattcaataaataaaggtataataatggaaattaataataaatgatgcattg 5841588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 49175910 - 49176097
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| |||| |||| |||   ||||||||||||||   |||||||||  |||||||||||  ||||||||||| |   |||||    
T  49175910 aataatagtcgtttaaggtttgtgcatgatttttaagaaaatgattaattgtggagatttcaatgataaaattagtatcatttactaaaataaccttatt 49176009  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt-tgaaacaaataataaatattgcattggt 192  Q
    |||||||||||| |||  | ||||||||||| ||||||||||||||| |||||||||||  |||| ||||||||| | ||||||||||    
T  49176010 aattgtagttagcggagtagttaagttggataaaattcaataaataagggtataatagtgggaaaaaaataataattgttgcattggt 49176097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 190
Target Start/End: Complemental strand, 2653527 - 2653381
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||||| ||||||||||| ||||||||||||  ||||| ||||| |   ||||||||||||||||  |||  | |||| ||||||||||||     
T  2653527 aaatgattaattgtgttgatttcaattgtaaaattagtatcatttattaaaatactcttattaattgtagttaaaggagtagttaaattggatgaaattt 2653428  T
Q  144 aataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||||||||||||| | |||| | ||||||||| ||||||||    
T  2653427 aataaataaaggtataataatggaaaaagataataaatgttgcattg 2653381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 52247409 - 52247559
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| | || |||||||||||||   |||||||||||||| || |||||||| ||||||||| ||  ||||||||||| ||  ||||||||||    
T  52247409 tagtcgtttaaggattgtgcacgattattaagaaaatgattaattgtgttaatttcaatggtaaaattaatacaatttactaaaatatccttattaattg 52247508  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataat 161  Q
    |||||||||||  | |||||||| |||||||||| |||||||  |||||||    
T  52247509 tagttagtggagtagttaagttgaatgaaattcattaaataagtgtataat 52247559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 164
Target Start/End: Complemental strand, 53346904 - 53346746
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||||||||||| ||| |||||||||||||   |||| ||| ||||| ||  ||||||| ||||||||| ||| |||||||||||||   |||||    
T  53346904 aatattagtcgtttaaaatttgtgcacgattattaagaaaataattgattgtgttagtttcaatggtaaaattaatagcatttactaaaacacccttatt 53346805  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    |||| |||||||||||  | ||||||| ||||||||||||||||||   ||||||||||    
T  53346804 aattttagttagtggagtagttaagtttgatgaaattcaataaatatgagtataatagt 53346746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 162
Target Start/End: Original strand, 21240708 - 21240836
Alignment:
Q  34 attattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttg 133  Q
    |||||||  ||||||||||| ||| |||||||  || ||||||||||||  ||||||||| ||||  |||||||||||||||||| ||  | ||||||||    
T  21240708 attattaaggaaatgattaactgtgttgattttgatggtaaaattagtatcatttactaacacatccttattaattgtagttagttgagtagttaagttg 21240807  T
Q  134 gatgaaattcaataaataaaggtataata 162  Q
    ||||||||||||||||||| |||||||||    
T  21240808 gatgaaattcaataaataagggtataata 21240836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 11288614 - 11288752
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    |||||||| |||| || ||||||||||   |||||||||||||||||||||||||| | ||||||| ||  ||||||||||| ||  |||||||||||||    
T  11288614 tcgtttaaggtttatgtacgattattaagaaaatgattaattgtattgatttcaatggcaaaattaatatcatttactaaaatat-cttattaattgtag 11288712  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaa 153  Q
    || |||||  | ||||||||||| ||||||||||||||||    
T  11288713 ttggtggagtagttaagttggataaaattcaataaataaa 11288752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 26147635 - 26147762
Alignment:
Q  50 ttaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaa-attcaataa 148  Q
    |||||||| |||||||  || ||||||||||||  ||||||||||||||  |||||||||||||||||||||  ||||||||||||||||  ||||||||    
T  26147635 ttaattgtgttgattttgatggtaaaattagtatcatttactaaaacattcttattaattgtagttagtggagtaattaagttggatgaattttcaataa 26147734  T
Q  149 ataaaggtataatagttgaaacaaataa 176  Q
    |||| ||||||||| | |||| ||||||    
T  26147735 ataagggtataataatggaaaaaaataa 26147762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 169
Target Start/End: Original strand, 38663424 - 38663586
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| ||||| | |||||||||| | ||| | ||||||   ||| ||||||| ||||||||||||| |||||||||||||  ||||||    
T  38663424 aatattagtcgtttaaggtttt-gaacgattattacaaaaacggttaattccgttgttttcaatggtaaaattagtagcatttactaaaacacttttatt 38663522  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaa 169  Q
    ||| |||||||||  |  | ||||||||||||||||| ||||||||  |||| |||||| ||||    
T  38663523 aatcgtagttagtaaagtagttaagttggatgaaatttaataaatatgggtacaatagtggaaa 38663586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 462065 - 461947
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||||||||||||||||| |||||| || || |||||||||||| ||  |||||||||||| |||| |||  | |||||||| || ||||||    
T  462065 aaatgattaattgtattgatttcaatggtaaaagtaatattatttactaaaatatccttattaattgtaattagcggagtagttaagttgaataaaattc 461966  T
Q  144 aataaataaaggtataata 162  Q
    || |||||| |||||||||    
T  461965 aacaaataagggtataata 461947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 51625223 - 51625137
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaaca 97  Q
    |||||||||||||||| |||||||||||||   |||||||||||||| ||||||||||| ||||||||||||  |||||||||||||    
T  51625223 tagtcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaaaaca 51625137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 35998946 - 35998782
Alignment:
Q  16 gtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtt 115  Q
    |||||| ||||||| |||||||||| | |||| |||| || | ||||||| || |||||||||||||  ||||| ||||| ||  |||||||||||||||    
T  35998946 gtttaatgtttttgtacgattattaaaaaaattattatttatgttgattttaacagtaaaattagtaacatttattaaaatatcattattaattgtagtt 35998847  T
Q  116 agtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
      ||||  | |||||||||||| |||||||||||||||| |||||||||  |||  ||||||||||    
T  35998846 gatggagtagttaagttggatg-aattcaataaataaagatataatagtgaaaaagaataataaat 35998782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 51624846 - 51624722
Alignment:
Q  91 taaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||||||  ||||||| ||||||||||||||  | ||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||| || |||||    
T  51624846 taaaacacttttattatttgtagttagtggagtagttaagttggatgaaattcaataaataagggtatgatagtggaaaaaaataataaatgttacattg 51624747  T
Q  191 gtgttgcattgtaaagtgacaattactttg 220  Q
     |     |||||||||||||||||| ||||    
T  51624746 at-----attgtaaagtgacaattattttg 51624722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 165
Target Start/End: Original strand, 18741494 - 18741609
Alignment:
Q  50 ttaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaa 149  Q
    |||||| ||||||||||||  |||||||||||   ||||| ||||| || ||||||||||||||||| ||||  | ||||||||||||||||||||||||    
T  18741494 ttaattatattgatttcaacggtaaaattagtgtcatttattaaaatatctttattaattgtagttaatggagtagttaagttggatgaaattcaataaa 18741593  T
Q  150 taaaggtataatagtt 165  Q
    |||   ||||||||||    
T  18741594 taagtttataatagtt 18741609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 190
Target Start/End: Complemental strand, 25233297 - 25233143
Alignment:
Q  35 ttattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttgg 134  Q
    |||||| |||||| ||||||||| || ||||  || ||||||||||||  |||||||||||||    |||||||| ||||||||| |  | |||||||||    
T  25233297 ttattaaagaaataattaattgtgttaattttgatggtaaaattagtatcatttactaaaacactagtattaattatagttagtgaagtagttaagttgg 25233198  T
Q  135 atgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||| |||||||||||||| ||| |||  ||||| ||||||||||| ||||||||    
T  25233197 atgaagttcaataaataaagatattata-atgaaaaaaataataaatgttgcattg 25233143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 28500876 - 28501047
Alignment:
Q  15 cgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagt 114  Q
    ||||||| |||| |||||||||||||  ||||||||| ||||| ||||||||||| ||||||||| ||  ||||||||||| |   |||||||||| |||    
T  28500876 cgtttaatgtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattgcagt 28500975  T
Q  115 tagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg--aaacaaataataaatattgcattggt 192  Q
    |||        ||||||| ||||||||||||||||||| ||||||||| | |  ||| ||||||||||| ||| ||||||    
T  28500976 tag--------ttaagtttgatgaaattcaataaataagggtataataatgggaaaaaaaataataaatgttgtattggt 28501047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 30682177 - 30682328
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||||||||||| ||||| | |||||||||||||| || |||| | | ||||||||| ||  |||||||| || ||  |||||| |||    
T  30682177 tagtcgtttaaggtttttgcacgactattaaaaaaatgattaattgtgttaattttattggtaaaattaatatcatttactataatatccttattagttg 30682276  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||||| ||  | |||| ||| ||||||||||||||||||| | ||||||    
T  30682277 tagttagtagagtagttaatttgaatgaaattcaataaataaaagcataata 30682328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 49579162 - 49579300
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttc-aatagtaaaattagtagtatttactaaaacatatttattaattgta 112  Q
    ||||||||||||| |||| |||| ||| | |||||||||||||| |||||||  |||  |||||||| || |||| |||||||||  |||||||||||||    
T  49579162 tcgtttaaagtttgtgcatgatttttaaataaatgattaattgtgttgatttttaatgataaaattattattatt-actaaaacacttttattaattgta 49579260  T
Q  113 gttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    |||| || ||   |||||||||||||||||||||||||||    
T  49579261 gttattgaaattgttaagttggatgaaattcaataaataa 49579300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 4972705 - 4972595
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||||||||||  ||| |||||||||||||  ||||||||||||||| ||||||||||| | |||||| ||   |||||||||||||   |||||    
T  4972705 aatattagtcgtttaagatttgtgcacgattattaatgaaatgattaattgtgttgatttcaattgaaaaattggtgacatttactaaaacactcttatt 4972606  T
Q  106 aattgtagtta 116  Q
    |||||||||||    
T  4972605 aattgtagtta 4972595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 46396859 - 46396969
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||| | ||||||| |||| |||||||| ||||   |||||||||||||| ||||||||||| ||||||||| ||| |||||||||||||   |||||    
T  46396859 aatatttgccgtttaaggtttgtgcacgatcattaagtaaatgattaattgtgttgatttcaatggtaaaattaatagcatttactaaaacactcttatt 46396958  T
Q  106 aattgtagtta 116  Q
    |||||||||||    
T  46396959 aattgtagtta 46396969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 19265945 - 19265797
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    ||||||||| ||| |||||| ||||||   |||||||||||| |||| ||||||||| |||||||| |  |||||| ||||| |   ||||||||| |||    
T  19265945 tcgtttaaactttctgcacggttattaagaaaatgattaattatatttatttcaataataaaattaatgttatttattaaaataaccttattaattatag 19265846  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||  | |||||||| |||||||||||||| ||| ||| |||||    
T  19265845 ttagtggagtagttaagttgaatgaaattcaataattaagggtgtaata 19265797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 10754423 - 10754333
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||  ||||||| |||| || ||||||||| | ||||||||||    
T  10754423 ttattaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataatggttggaa-aaataataattgttgcattggt 10754333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 10968192 - 10968102
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||  ||||||| |||| || ||||||||| | ||||||||||    
T  10968192 ttattaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataatggttggaa-aaataataattgttgcattggt 10968102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 162
Target Start/End: Original strand, 50264102 - 50264212
Alignment:
Q  52 aattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaata 151  Q
    |||||| |||||||||||  ||||||||  |  ||||||||||| |   ||||||||||||||||||| || | |||||||| |||||||||||||||||    
T  50264102 aattgtgttgatttcaatgttaaaattaacatcatttactaaaatactcttattaattgtagttagtgaaatatttaagttgaatgaaattcaataaata 50264201  T
Q  152 aaggtataata 162  Q
    | |||||||||    
T  50264202 agggtataata 50264212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 47358963 - 47359088
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||| ||| ||||| |||||||||||  ||||||||| |  |||| |||||| |  ||||||||||||||| ||||||  |||||||||| |||||||||    
T  47358963 aaattattgattgtgttgatttcaatgataaaattagaataattttctaaaatacttttattaattgtagtcagtggagtaattaagttgaatgaaattc 47359062  T
Q  144 aataaataaaggtataatagttgaaa 169  Q
    ||||||||| |||  |||||| ||||    
T  47359063 aataaataagggtgcaatagtggaaa 47359088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 18532324 - 18532140
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||| |||||| |||| |||| |||| ||| | |||||||||||| |||  |||| ||| ||||||||||||  ||||| ||||| |  ||||||    
T  18532324 aataatagttgtttaaggtttgtgcatgatttttacataaatgattaattatataaattttaatggtaaaattagtatgatttattaaaatagttttatt 18532225  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||| |||| ||||||    |||| | |||||||||||||||||| | | |||||||||  |||  ||||||||||||| |||||    
T  18532224 aattatagtaagtggagtggttaactaggatgaaattcaataaattatgatataatagtgaaaaataataataaatattacattg 18532140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 52869215 - 52869107
Alignment:
Q  8 tattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaa 107  Q
    |||||||||||||| |||| ||||| |||||||  ||||| ||||||||| |||||||||||||||| |||| ||   |||| ||||| |  ||||||||    
T  52869215 tattagtcgtttaaggtttgtgcacaattattaaggaaataattaattgtgttgatttcaatagtaagattaatatcgtttattaaaatacctttattaa 52869116  T
Q  108 ttgtagtta 116  Q
    |||||||||    
T  52869115 ttgtagtta 52869107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 54506895 - 54506787
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||| ||| ||||||||||| ||||||||| ||  ||||| ||||| ||  |||| ||||||||||||||||  | ||||||| ||||||||||    
T  54506895 aaatgattaactgtgttgatttcaatggtaaaattaatatcatttattaaaatatcattatcaattgtagttagtggagtagttaagtttgatgaaattc 54506796  T
Q  144 aataaataa 152  Q
    ||| |||||    
T  54506795 aattaataa 54506787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 44526445 - 44526377
Alignment:
Q  85 atttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaa 153  Q
    ||||| ||||||||  |||||||||||||||||||||| | | ||||||||||||||| ||||||||||    
T  44526445 atttattaaaacatccttattaattgtagttagtggaatagtgaagttggatgaaatttaataaataaa 44526377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 174
Target Start/End: Original strand, 32469962 - 32470091
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||||| ||||||| ||| ||||||||||||  ||||| ||||||||  ||||||| |||||||| |  |    ||||||| ||| ||||||    
T  32469962 aaatgattaattgtgttgattttaatggtaaaattagtatcatttattaaaacattcttattaactgtagttaataaagtttttaagtttgat-aaattc 32470060  T
Q  144 aataaataaaggtataatagttgaaacaaat 174  Q
    ||||||||||| ||| ||||| |||| ||||    
T  32470061 aataaataaagatatcatagtggaaaaaaat 32470091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 152
Target Start/End: Original strand, 38502458 - 38502604
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||  ||||   ||||||  ||||| ||||||||| |||||||  || ||||||||||||  ||||| ||||| |  ||||||    
T  38502458 aataatagtcgtttaaggttgatgcatagttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttattaaaatacttttatt 38502557  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    |||| |||||| || |  | ||||||||||| |||||||||||||||    
T  38502558 aattatagttaatgtagtagttaagttggataaaattcaataaataa 38502604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 5618680 - 5618536
Alignment:
Q  13 gtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgta 112  Q
    ||||||||| |||| ||| ||||||||| | ||||||| | |||| ||||||| ||| |||||||||  | |||||| ||||| ||  |||||||||||     
T  5618680 gtcgtttaatgtttgtgctcgattattaaaaaaatgatgagttgtgttgattttaatggtaaaattaaaattatttattaaaatatccttattaattgtt 5618581  T
Q  113 gttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    || |||||     | |||||| ||||||||||||||| |||| |||||||    
T  5618580 gtgagtgg-----taaagttgaatgaaattcaataaaaaaagttataata 5618536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 10672703 - 10672614
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcatt 189  Q
    ||||||||| |||| | || || | |||||||||||||||||||||||||||  ||||||| |||| ||| ||||||||||| |||||||    
T  10672703 ttattaattttagtcaatgaaatagttaagttggatgaaattcaataaataagagtataatggttgaaaaaaaataataaatcttgcatt 10672614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 10886343 - 10886254
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcatt 189  Q
    ||||||||| |||| | || || | |||||||||||||||||||||||||||  ||||||| |||| ||| ||||||||||| |||||||    
T  10886343 ttattaattttagtcaatgaaatagttaagttggatgaaattcaataaataagagtataatggttgaaaaaaaataataaatcttgcatt 10886254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 42517638 - 42517773
Alignment:
Q  30 cacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaa---caat 126  Q
    |||||||||||   |||||||||||||| ||||||||||| |||||||||  |  ||||||||||| |   ||||||||| ||||||||| ||    | |    
T  42517638 cacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaagatcatttactaaaatacccttattaattatagttagtgaaatactagt 42517737  T
Q  127 taagttggatgaaattcaataaataaaggtataata 162  Q
     ||||| |||||||||||||||||||  ||||||||    
T  42517738 aaagttagatgaaattcaataaataacagtataata 42517773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 1038961 - 1038873
Alignment:
Q  71 gtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtata 159  Q
    |||||||||||| ||| || ||||| || ||||||||| |||||| ||||| ||||||||  |  ||||||| ||||||||||||||||    
T  1038961 gtaaaattagtattatgtattaaaatatttttattaatagtagttcgtggagcaattaagcagagtgaaattgaataaataaaggtata 1038873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 28911252 - 28911316
Alignment:
Q  126 ttaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||| |||||||||||||||||||  |||||||| | |||| ||||||||||| ||||||||    
T  28911252 ttaagtttgatgaaattcaataaataagagtataataatggaaaaaaataataaatgttgcattg 28911316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 43902318 - 43902238
Alignment:
Q  84 tatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    |||||| ||||| ||  ||||||||  |||||||||||  |||||||||| |||||||||||||||||| || ||||||||    
T  43902318 tatttattaaaatattcttattaatcatagttagtggagtaattaagttgcatgaaattcaataaataagggcataatagt 43902238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 31370373 - 31370432
Alignment:
Q  103 attaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||| |||||||||||  | ||||||||||||||| |||||||||||| ||||||||    
T  31370373 attaattatagttagtggagtagttaagttggatgaaaatcaataaataaatgtataata 31370432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 160
Target Start/End: Original strand, 48914156 - 48914278
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagt-----atttactaaaacatatttattaattgtagttagtggaacaattaagttggatg 137  Q
    ||||| ||||||||| || |||||||| |||||||||||| |     || |||||||| ||  |||||| |||||||||||| |  |||||||||  |||    
T  48914156 gaaataattaattgtgttcatttcaatggtaaaattagtactccatcatatactaaaatatccttattatttgtagttagtgaagtaattaagtttaatg 48914255  T
Q  138 aaattcaataaataaaggtataa 160  Q
    ||||||||||||| | |||||||    
T  48914256 aaattcaataaattagggtataa 48914278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 3098825 - 3098757
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgta 112  Q
    |||||||||||| |||||||||||||  |||||||  ||  ||||||||||| || |||||||||||||    
T  3098825 aaatgattaattatattgatttcaatgataaaattgatatcatttactaaaatatctttattaattgta 3098757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 41711437 - 41711608
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||| |||||| |||| ||||| ||| |||| ||||||||||||| | ||||||| ||| ||||||||| ||  ||||  ||||| ||  || ||||||     
T  41711437 tagttgtttaaggtttgtgcacaatttttatggaaatgattaattatgttgattttaatggtaaaattaatatcattttttaaaatatcatttttaattt 41711536  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaat 181  Q
    || |||| |||    |||||||  |||||||||||||||||| | || |||||| | ||| |||||||||||    
T  41711537 tatttagcggagttgttaagttttatgaaattcaataaataaggatacaatagtggaaaaaaaataataaat 41711608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 4972589 - 4972532
Alignment:
Q  134 gatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||||||||||||  ||||||||| ||||| ||||||||||| || |||||||    
T  4972589 gatgaaattcaataaataagtgtataatag-tgaaaaaaataataaatgttacattggt 4972532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 26885542 - 26885504
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagt 81  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  26885542 gaaatgattaattgtattgatttcaatgataaaattagt 26885504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 30192312 - 30192238
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagt 118  Q
    |||||||||||||| |||||||||||  |||||||| |   |||| |||||| ||  ||||||||||||||||||    
T  30192312 aaatgattaattgtgttgatttcaattataaaattaatgtcatttgctaaaatattcttattaattgtagttagt 30192238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 27880330 - 27880363
Alignment:
Q  129 agttggatgaaattcaataaataaaggtataata 162  Q
    |||||||||||||| |||||||||||||||||||    
T  27880330 agttggatgaaatttaataaataaaggtataata 27880363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 54202247 - 54202167
Alignment:
Q  100 tttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||||||||||| |||||| |  |||| ||| ||||||||||||||||||||   ||||| ||| |||| |||||||||||    
T  54202247 tttattaattgtaattagtgaagtaattgagtgggatgaaattcaataaataagaatataacagtagaaa-aaataataaat 54202167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 7987066 - 7986962
Alignment:
Q  59 ttgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtat 158  Q
    ||||||| |||  |||||||||||  || |||||||| ||  ||||||||| | |||||| ||  | |||||||  |||||||| |||||||||| ||||    
T  7987066 ttgattttaatgataaaattagtatcatctactaaaatattattattaattattgttagtagagtagttaagtttaatgaaattaaataaataaaagtat 7986967  T
Q  159 aatag 163  Q
    |||||    
T  7986966 aatag 7986962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 16506288 - 16506324
Alignment:
Q  85 atttactaaaacatatttattaattgtagttagtgga 121  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  16506288 atttactaaaacacatttattaattgtagttaatgga 16506324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 189
Target Start/End: Original strand, 17512347 - 17512499
Alignment:
Q  38 ttatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatg 137  Q
    ||||| ||||||||| |||  ||||||| ||  ||||||||| ||  ||||||||||| |   ||||||||||||||| || ||| |||||||| |  |     
T  17512347 ttataaaaatgattagttgagttgattttaaaggtaaaattaatataatttactaaaataccattattaattgtagtttgtcgaataattaagtagagtt 17512446  T
Q  138 aaattcaataa-ataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
     |||||||||| ||||  | ||| |||| |||| |||||||||||||| ||||    
T  17512447 gaattcaataatataagtgcatattagtggaaaaaaataataaatattacatt 17512499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 19627114 - 19627169
Alignment:
Q  134 gatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||| ||| ||| ||||    
T  19627114 gatgaaattcaataaataaagatataatag-tgaaaaaaataattaatgttgtattg 19627169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 31257558 - 31257518
Alignment:
Q  42 agaaatgattaattgtattgatttcaatagtaaaattagta 82  Q
    |||||||||||||| ||||||||| ||| ||||||||||||    
T  31257558 agaaatgattaattttattgattttaattgtaaaattagta 31257518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 35251936 - 35251888
Alignment:
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||  ||||||||| ||||||||||||||||||| | |||||||    
T  35251936 ttagtggagtaattaagttagatgaaattcaataaataaggatataata 35251888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 1e-52; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 181700 - 181517
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||| ||| ||||  |||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  181700 aatattagtcgtctaaggtttgagcacgattattaaaaaaat-attaattgtattgatttcaatagtaaaattagtagtatttactaaaacatcattatt 181602  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||| |||||||||||  | ||||||||||||||||||||||||||| |||||||||||  |||  |||||||||| ||||||||    
T  181601 aattatagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtgaaaaataataataaatgttgcattg 181517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 6 - 164
Target Start/End: Original strand, 3720210 - 3720368
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||||||||||||  ||||||||||||||| |||||||||||  ||||||| ||||||||||| ||||||   |||||    
T  3720210 aatattagtcgtttaaggtttgtgcacgattattaatgaaatgattaattgtgttgatttcaattataaaatttgtagtatttacaaaaacactcttatt 3720309  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    ||||||||||||||||| | |||||||| |||||||||| |||||||  ||||||||||    
T  3720310 aattgtagttagtggaatagttaagttgaatgaaattcagtaaataagagtataatagt 3720368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 3291737 - 3291913
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| ||||||||||||||||||  ||||||||||||||||| ||||| ||| |||| ||||||| |||||||||||| |  ||||||    
T  3291737 aataatagtcgtttaaggtttttgcacgattattaaggaaatgattaattgtatcgattttaatggtaatattagtattatttactaaaatacctttatt 3291836  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaata 182  Q
    |||||||||||||| |  | ||||||||||| |||||||||||||||  |||||| | | || | ||||||||||||    
T  3291837 aattgtagttagtgaagtagttaagttggataaaattcaataaataagtgtataacaatggacaaaaataataaata 3291913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 31894179 - 31894361
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||| ||||||||  ||| || | ||||||||   |||||||||||||| ||||||||||| ||||||||||||| |||||||||||| |  |||||    
T  31894179 aatattaatcgtttaagatttgtgtatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacgtcattatt 31894278  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||||||||||||| |  | ||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||| ||||||||    
T  31894279 aattgtagttagtgaagtagttaagttggatgaaatttaataaataagggtataatag-tgaaa-aaataataaatgttgcattg 31894361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 188
Target Start/End: Complemental strand, 15058262 - 15058081
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||||||||||||   ||||||||||||   || |||||||| ||||||||||| | ||||||||||| |   |||||    
T  15058262 aatattagtcgtttaaggtttgtgcacgattattaagaaaatgattaattaagttaatttcaatggtaaaattagtggcatttactaaaatacccttatt 15058163  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcat 188  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||| |||||||||||  ||| ||||||||||| ||||||    
T  15058162 aattgtagttagtgaagtatttaagttggatgaaattcaataaataagggtataatagtacaaa-aaataataaatgttgcat 15058081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 13909558 - 13909384
Alignment:
Q  17 tttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtta 116  Q
    |||||||||| |||||||||||||  ||||||||||| ||| ||||||||||| |||||||||||   ||||||||||| |   ||||||||||||||||    
T  13909558 tttaaagtttgtgcacgattattaaggaaatgattaaatgtgttgatttcaatggtaaaattagtgacatttactaaaatacccttattaattgtagtta 13909459  T
Q  117 gtggaacaattaagttggatgaaattcaataaataaaggtataatagt-tgaaacaaataataaatattgcattg 190  Q
    |||||  ||||||||| ||||||||| |||||||||  |||||||| |  |||| ||||||||||| ||| ||||    
T  13909458 gtggagtaattaagttagatgaaattgaataaataagagtataataatgagaaaaaaataataaatgttgtattg 13909384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 29363451 - 29363279
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| ||||| |||||||   |||||||||||||| |||||||  || |||||| |||||  ||||||||||||||  |||||    
T  29363451 aataatagtcgtttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaactagtatcatttactaaaacatccttatt 29363352  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataa 179  Q
    |||||||||||| |||  | |||||||||||||||||||||||||||  |||||||| | |||| |||||||||    
T  29363351 aattgtagttagcggattagttaagttggatgaaattcaataaataagagtataataatggaaa-aaataataa 29363279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 11655921 - 11656100
Alignment:
Q  12 agtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgt 111  Q
    |||||||||| |||| |||||| ||||||   |||||||||||||| |||||||  || |||||||||||   |||||||||||||   |||||||||||    
T  11655921 agtcgtttaaggtttatgcacggttattaagaaaatgattaattgtgttgattttgatggtaaaattagtgtcatttactaaaacacccttattaattgt 11656020  T
Q  112 agttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt-tgaaacaaataataaatattgcattg 190  Q
    ||||||||||  | | ||||||||||||||||||||||||| ||||||||| |  |||| |||||||||||  |||||||    
T  11656021 agttagtggagtagtaaagttggatgaaattcaataaataagggtataataatgggaaaaaaataataaatgctgcattg 11656100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 32440614 - 32440798
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||||||||  ||| |||||| |||||   ||||||||||||||| |||||||  || |||||||||||| ||||||||||||||   |||||    
T  32440614 aataatagtcgtttaagatttatgcacggttatttaggaaatgattaattgtgttgattttgatggtaaaattagtattatttactaaaacacccttatt 32440713  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||| ||||| ||  | ||||||||||||||||  |||||||||||||| |||| | ||||  ||||||||||  |||||||    
T  32440714 aattgtaattagtagagtagttaagttggatgaaatgtaataaataaaggtacaataatggaaaataataataaatgctgcattg 32440798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 1781939 - 1781791
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    |||||||| |||| ||||||||| |||   |||||||||||| | ||||| ||||| ||||||||||||| |||||||||||||   |||||||||||||    
T  1781939 tcgtttaaggtttatgcacgattgttaagaaaatgattaattatgttgatctcaatggtaaaattagtagcatttactaaaacacccttattaattgtag 1781840  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    ||||||||    |||||||| ||||||||||||||| ||||||||||||||    
T  1781839 ttagtggagtg-ttaagttgaatgaaattcaataaa-aaaggtataatagt 1781791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 13087650 - 13087529
Alignment:
Q  31 acgattattatagaaa-tgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaa 129  Q
    |||||||||| ||||| ||||||||||| ||||||||||| ||||||||| ||  ||||||||||||||  ||||||||| ||||||||| |  ||||||    
T  13087650 acgattatta-agaaagtgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacatccttattaattatagttagtgaagtaattaa 13087552  T
Q  130 gttggatgaaattcaataaataa 152  Q
    |||||||||||||||||||||||    
T  13087551 gttggatgaaattcaataaataa 13087529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 21804511 - 21804639
Alignment:
Q  19 taaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagt 118  Q
    |||||||| ||||  ||| ||| ||||||||||||||||||| |||||||| ||||||||||||  ||||||| ||| ||  ||||||||||||||||||    
T  21804511 taaagtttgtgcataatttttaaagaaatgattaattgtattaatttcaattgtaaaattagtatcatttacttaaatat-cttattaattgtagttagt 21804609  T
Q  119 ggaacaattaagttggatgaaattcaataa 148  Q
    |||| |||||||||||| |||||| |||||    
T  21804610 ggaaaaattaagttggaagaaatttaataa 21804639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 1225170 - 1225037
Alignment:
Q  28 tgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaatt 127  Q
    ||||||| | ||| |||||||||||||||| ||||||| ||||||||||||| || |||||||||||| ||  ||||||||| ||||||||| |  | ||    
T  1225170 tgcacgagttttaaagaaatgattaattgtgttgatttaaatagtaaaattaatattatttactaaaatattcttattaattttagttagtgaagaagtt 1225071  T
Q  128 aagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||| ||||| ||||||||| |||||||||    
T  1225070 aagttggat-aaattgaataaataagggtataata 1225037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 23142812 - 23142604
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||  ||||| |||| | |||||||||||   |||||||||||||| ||||||||||| |||||| |||| | |||||||||||||   |||||    
T  23142812 aatattagttatttaaggtttatccacgattattaagaaaatgattaattgtgttgatttcaatggtaaaaatagtggcatttactaaaacacccttatt 23142713  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaa 205  Q
    |||||||| |||||||  | ||||| | ||||||||||||||||  ||||||||||| | | || |||  |||||| |||||||| |     ||||||||    
T  23142712 aattgtaggtagtggagtagttaagctagatgaaattcaataaa-gaaggtataataatgggaaaaaacgataaatgttgcattgat-----attgtaaa 23142619  T
Q  206 gtgacaattactttg 220  Q
    |||||||||| ||||    
T  23142618 gtgacaattattttg 23142604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 7920374 - 7920226
Alignment:
Q  15 cgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagt 114  Q
    |||||||  ||| ||||||||| ||| |||||||||||||| | ||||||||||| |||||||||  |  ||||||||||| || || ||||||||||||    
T  7920374 cgtttaagatttgtgcacgatttttaaagaaatgattaattttgttgatttcaatggtaaaattaaaaccatttactaaaatatctt-attaattgtagt 7920276  T
Q  115 tagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    ||||| |  | |||| ||| |||||||||||||||||| |||||||||||    
T  7920275 tagtgaagtatttaatttgaatgaaattcaataaataatggtataatagt 7920226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 24983455 - 24983576
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    |||||||||| |||  ||||||||||| |||||||||||   |||||||||||||   |||||||||||||||||||||  | ||||||||| |||||||    
T  24983455 gaaatgattagttgagttgatttcaatggtaaaattagtgtcatttactaaaacacccttattaattgtagttagtggagtagttaagttgggtgaaatt 24983554  T
Q  143 caataaataaaggtataatagt 164  Q
    |||||||||| |||||| ||||    
T  24983555 caataaataagggtatattagt 24983576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 34657609 - 34657694
Alignment:
Q  84 tatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaa 169  Q
    |||||| |||||||  ||||||||||||||||||||||  | |||||||||||||||||||||||||||| |||||||||| ||||    
T  34657609 tatttattaaaacacttttattaattgtagttagtggagtagttaagttggatgaaattcaataaataaatgtataatagtggaaa 34657694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 6834349 - 6834510
Alignment:
Q  17 tttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtta 116  Q
    |||||||||| |||||||||||||   |||| ||||||||| |||||||  ||||| |||||| ||  |||||||||||||  |||||||||| ||||||    
T  6834349 tttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaattaatatcatttactaaaacacctttattaattatagtta 6834448  T
Q  117 gtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataa 179  Q
    || ||| |  ||| ||| |||| ||||||||||||||  ||||||| | |||| |||||||||    
T  6834449 gtagaatagataaattgaatgagattcaataaataaa-atataataatggaaaaaaataataa 6834510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 5302458 - 5302321
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||| ||| |||||||  || ||||||||| ||  |||||| |||||||  |||||||||||||||| ||||  | |||||||||||||| |||    
T  5302458 aaatgattaaatgtgttgattttgatggtaaaattaatataatttaccaaaacatccttattaattgtagttaatggagtagttaagttggatgaagttc 5302359  T
Q  144 aataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||||||  ||||| ||| | |||| |||||||||||    
T  5302358 aataaatacgggtattataatggaaaaaaataataaat 5302321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 17829048 - 17828939
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    ||||| |||||| || || ||||||| |||||||||| ||  ||||||||||| || |||||||||||||||||||| |  |||||||||||||||||||    
T  17829048 gaaattattaatagtgttaatttcaacagtaaaattaatatcatttactaaaatatctttattaattgtagttagtgaagtaattaagttggatgaaatt 17828949  T
Q  143 caataaataa 152  Q
     ||| |||||    
T  17828948 taattaataa 17828939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 161
Target Start/End: Original strand, 1063572 - 1063727
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||||||||||||| || |  ||| |||   |||||||||||||| |||||||||||  ||||||||||| |||||||||||| |   | | |    
T  1063572 aatagtagtcgtttaaagtttatgtataatttttaagaaaatgattaattgtgttgatttcaatgataaaattagtattatttactaaaatactctgagt 1063671  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataat 161  Q
    ||||||||||||||||  | |||||||  |||||||| ||||| ||| ||||||||    
T  1063672 aattgtagttagtggagtagttaagttaaatgaaatttaataagtaagggtataat 1063727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 190
Target Start/End: Complemental strand, 6802038 - 6801891
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||| | |||||||  || ||||||||| ||  ||||||||||||    |||||||||||||||||||||  | |||||||||||||| |||    
T  6802038 aaatgattaattatgttgattttgatggtaaaattaatatcatttactaaaacgcccttattaattgtagttagtggagtagttaagttggatgaagttc 6801939  T
Q  144 aataaataaaggtataatagttg-aaacaaataataaatattgcattg 190  Q
     |||||||| ||||| ||| | | ||| ||||||||||| ||||||||    
T  6801938 gataaataagggtattataatggaaaaaaaataataaatgttgcattg 6801891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 30717045 - 30716858
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||||||||  ||  |||||  ||||||  ||||||||||||| |||||| ||  || ||||||||||||  ||||||| |||||   |||||    
T  30717045 aataatagtcgtttaagattgatgcacagttattaaggaaatgattaattttattgactttgatggtaaaattagtatcatttacttaaacacccttatt 30716946  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcattggt 192  Q
    ||||||||||||||||  | | ||||||||| |||||||||||||||  |||| ||| | | ||| ||||||||||| ||||| ||||    
T  30716945 aattgtagttagtggagtagtaaagttggataaaattcaataaataagagtattataatggaaaaaaaataataaatgttgcactggt 30716858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 190
Target Start/End: Original strand, 1955990 - 1956132
Alignment:
Q  48 gattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaata 147  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||| | |   ||||||||||||||||||| |  |  |  ||| ||| ||||||||||    
T  1955990 gattaattgtattgatttcaatggtaaaattagtatcatttactaatatactcttattaattgtagttagtgaagtagctgtgttcgataaaattcaata 1956089  T
Q  148 aataaaggtataatagt-tgaaacaaataataaatattgcattg 190  Q
    ||| ||||||||||| |  |||| ||||||||||| ||||||||    
T  1956090 aat-aaggtataataatgagaaaaaaataataaatgttgcattg 1956132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 21010322 - 21010162
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||| |||||| |||| ||||| |||||||   |||||||||||||| || ||||  || | ||||||||||  |||||||||||||   ||||     
T  21010322 aataatagttgtttaaggtttatgcacaattattaagaaaatgattaattgtgttaattttgatggaaaaattagtatcatttactaaaacacccttata 21010223  T
Q  106 aattgtagtta----gtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||||||||    |||||  | |||||||||||||||||||||||||||  ||||||||    
T  21010222 aattgtagttaattagtggagtagttaagttggatgaaattcaataaataacagtataata 21010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 27448133 - 27448231
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgta 112  Q
    |||||||| |||||||||| |||||||  ||||||||||||||| |||||||  ||  | |||||||||  ||||||||||||||  ||||||||||||    
T  27448133 tcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagtatcatttactaaaacatcattattaattgta 27448231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 15582389 - 15582246
Alignment:
Q  45 aatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattca 144  Q
    ||||||||||||| ||||||||||| ||||||| ||||  ||||| ||||| | ||||| |  |||||||||||| |    |||||||  ||||||||||    
T  15582389 aatgattaattgtgttgatttcaatggtaaaatcagtatcatttattaaaatacatttacttgttgtagttagtgaagtggttaagtttaatgaaattca 15582290  T
Q  145 ataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||||||| | ||| |||| ||||| ||||||||| ||||||||||    
T  15582289 ataaataaggatatgatag-tgaaa-aaataataattattgcattg 15582246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 190
Target Start/End: Complemental strand, 34300092 - 34299955
Alignment:
Q  54 ttgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaa 153  Q
    |||| ||||||| |||  ||||||||||| |||||||||||| ||  ||||||||||| ||||||| |  | ||||||||||||  |||||||||||||     
T  34300092 ttgttttgatttgaatgataaaattagtattatttactaaaatatccttattaattgtggttagtgaagtagttaagttggatggtattcaataaataag 34299993  T
Q  154 ggtataatagttgaaa-caaataataaatattgcattg 190  Q
    | |||| |||| ||||  ||||||||||| ||| ||||    
T  34299992 gatatattagtggaaagaaaataataaatgttgtattg 34299955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 11143622 - 11143741
Alignment:
Q  72 taaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaaca 171  Q
    |||||||||||  |||||||||| ||   ||||||||| ||||||||| |  | |||||||||||||| |||||||||||| ||||| |||  ||||| |    
T  11143622 taaaattagtatcatttactaaatcacccttattaattatagttagtgaagtagttaagttggatgaagttcaataaataagggtattata-atgaaaaa 11143720  T
Q  172 aataataaatattgcattggt 192  Q
    ||||||||||  |||||||||    
T  11143721 aataataaatgctgcattggt 11143741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 192
Target Start/End: Complemental strand, 17835491 - 17835345
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||| ||||||||||||||||| |||| |||||||| |   ||||||||||| | ||||||||||||||||| ||  |  | ||||||||||||| ||||    
T  17835491 aaataattaattgtattgattttaataataaaattaatctcatttactaaaatacatttattaattgtagtttgtttagtagttaagttggatgatattc 17835392  T
Q  144 aataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
     || ||||| ||||||||| | | || |||||| |||| ||||||||||    
T  17835391 -attaataatggtataata-taggaaaaaataacaaatgttgcattggt 17835345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 10923413 - 10923507
Alignment:
Q  72 taaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg 166  Q
    |||||||| || |||||||||||| |   || |||||||||| |||||||| |||||| || |||||||||||||||||||   |||||||||||    
T  10923413 taaaattaatattatttactaaaataccgttgttaattgtagctagtggaataattaaattagatgaaattcaataaataagaatataatagttg 10923507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 33510218 - 33510129
Alignment:
Q  72 taaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||||| |||||||||||| || ||||||||||||| ||| | ||  | ||||||||||||||||| | ||||||| |||||||||    
T  33510218 taaaattagta-tatttactaaaatatttttattaattgtaattaattgagtagttaagttggatgaaatttattaaataagggtataata 33510129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 15046171 - 15046111
Alignment:
Q  103 attaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    |||||||||||||||||||  | ||| ||||||||||||||||||||||| |||||||||||    
T  15046171 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 15046111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 27367427 - 27367496
Alignment:
Q  28 tgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaaca 97  Q
    ||||||||||||| |||||||||||||||| ||||||| | | ||||||||| | | |||||||||||||    
T  27367427 tgcacgattattaaagaaatgattaattgtgttgattttagttgtaaaattaattgcatttactaaaaca 27367496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 27457774 - 27457843
Alignment:
Q  28 tgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaaca 97  Q
    ||||||||||||| |||||||||||||||| ||||||| | | ||||||||| | | |||||||||||||    
T  27457774 tgcacgattattaaagaaatgattaattgtgttgattttagttgtaaaattaattgcatttactaaaaca 27457843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 16205206 - 16205273
Alignment:
Q  84 tatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    |||||||||||| || || |||||||||||||||||||| | ||||||| ||||||| |||||||||||    
T  16205206 tatttactaaaatatctt-attaattgtagttagtggaatatttaagttagatgaaactcaataaataa 16205273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 185
Target Start/End: Complemental strand, 21018879 - 21018723
Alignment:
Q  31 acgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaatta-a 129  Q
    ||||||||||  |||||||||| |  ||||||||| |||  ||||||  ||| ||||||||||||||   |||||| || |||||| ||||| ||||| |    
T  21018879 acgattattaaggaaatgattactactattgattttaatgataaaatatgtattatttactaaaacaccattattagttatagttaatggaataattata 21018780  T
Q  130 gttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattg 185  Q
    | ||  |||||| |||||||||||||| || |||| | ||| |||||||||||||||    
T  21018779 gatgattgaaatacaataaataaaggtgtattagtagaaaaaaaataataaatattg 21018723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 8695124 - 8695077
Alignment:
Q  72 taaaattagtagtatttactaaaacatatttattaattgtagttagtg 119  Q
    |||||||| ||| ||||||||||||||  |||||||||||||||||||    
T  8695124 taaaattaatagcatttactaaaacattcttattaattgtagttagtg 8695077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 21425646 - 21425712
Alignment:
Q  126 ttaagttggatgaaattcaataaataaaggtataatagttgaaaca--aataataaatattgcattg 190  Q
    ||||||||||||||||||||||||||| | |||||| || |||| |  |||||||||| ||||||||    
T  21425646 ttaagttggatgaaattcaataaataaggatataatggtggaaaaaataataataaatgttgcattg 21425712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 23397643 - 23397705
Alignment:
Q  59 ttgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtgga 121  Q
    ||||||| ||| |||||||||||   ||||||||||||| || |||||| |||||||||||||    
T  23397643 ttgatttaaatggtaaaattagtgtaatttactaaaacacatctattaagtgtagttagtgga 23397705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 27367524 - 27367600
Alignment:
Q  136 tgaaattcaataaataaaggtataatagttgaaacaaa--taataaatattgcattggtgttgcattgtaaagtgacaatta 215  Q
    ||||||||||||||||| ||||||||||| |||| |||  |||||||| || |||||||     ||||||||||||||||||    
T  27367524 tgaaattcaataaataagggtataatagtggaaaaaaaactaataaatgttacattggt-----attgtaaagtgacaatta 27367600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 27457871 - 27457947
Alignment:
Q  136 tgaaattcaataaataaaggtataatagttgaaacaaa--taataaatattgcattggtgttgcattgtaaagtgacaatta 215  Q
    ||||||||||||||||| ||||||||||| |||| |||  |||||||| || |||||||     ||||||||||||||||||    
T  27457871 tgaaattcaataaataagggtataatagtggaaaaaaaactaataaatgttacattggt-----attgtaaagtgacaatta 27457947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 22398463 - 22398411
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaa 153  Q
    |||||||||||||||| || |  | ||||||| ||||||||||||||||||||    
T  22398463 ttattaattgtagttattgaagtagttaagttagatgaaattcaataaataaa 22398411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 31283490 - 31283526
Alignment:
Q  126 ttaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||||||||||||||||||||| | |||||||    
T  31283490 ttaagttggatgaaattcaataaataaggatataata 31283526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 2e-51; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 31655198 - 31655012
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||||| ||||||||||| ||||||||| ||  |||||||| || ||  |||||    
T  31655198 aatattagtcgtttaaagtttgtgtacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactataatatccttatt 31655099  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||||||||  ||||| |||| |||||||||||||||||| ||||||||||| |||| ||||||||| ||||| ||||||    
T  31655098 aattgtagttagtggagtaattatgttgaatgaaattcaataaataagggtataatagtggaaataaataataattattgtattggt 31655012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 41496225 - 41496016
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||||| |||| |||| | ||||||||||| | |||| ||||||||| ||||||||||| ||||||||||| | ||||| ||||||||  |||||    
T  41496225 aatattagtcgattaaggtttgtacacgattattaaaaaaataattaattgtgttgatttcaatggtaaaattagttgcatttagtaaaacatcattatt 41496126  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaa 205  Q
    ||||||||||||||||  | |||| ||||||||||| |||||||||||||||||||||| ||||  |||||||||| ||||||| ||     ||||||||    
T  41496125 aattgtagttagtggagtagttaaattggatgaaatgcaataaataaaggtataatagtggaaaagaataataaatgttgcattagt-----attgtaaa 41496031  T
Q  206 gtgacaattactttg 220  Q
    |||||||||| ||||    
T  41496030 gtgacaattattttg 41496016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 181
Target Start/End: Complemental strand, 4818696 - 4818520
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||| ||||||||| |||| |||||||||||||  ||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||   |||||    
T  4818696 aatatttgtcgtttaaggtttgtgcacgattattaaggaaataattaattgtgttgatttcaattgtaaaattagtagcatttactaaaacacccttatt 4818597  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt-tgaaacaaataataaat 181  Q
    ||||||||||||||||   |||||||| ||||||||||||||||||| |||||||||||  |||| |||||||||||    
T  4818596 aattgtagttagtggagtgattaagttagatgaaattcaataaataagggtataatagtgggaaaaaaataataaat 4818520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 8698454 - 8698244
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||| || |||||| |||| ||||||||||||| |||||||||||||||| ||||||||||| ||||||||||| | |||||| ||||||   |||||    
T  8698454 aatatttgttgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattagttgcatttaccaaaacacccttatt 8698355  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcattggtgttgcattgtaa 204  Q
    ||||||||||||||||    ||||||||||||||||||||||||||| ||||||||||| | ||| |||||||||||| | ||||| |     |||||||    
T  8698354 aattgtagttagtggagtggttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaatactacattgat-----attgtaa 8698260  T
Q  205 agtgacaattactttg 220  Q
    ||||||||||| ||||    
T  8698259 agtgacaattattttg 8698244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 15818450 - 15818636
Alignment:
Q  8 tattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtag--tatttactaaaacatatttatt 105  Q
    |||||||||||||| |||| |||||||||||||  |||||| |||||||| ||||||||||| |||||||||||||  ||||||||||||||  ||||||    
T  15818450 tattagtcgtttaaggtttatgcacgattattaaggaaatgtttaattgtgttgatttcaatggtaaaattagtagcatatttactaaaacacctttatt 15818549  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||| | ||||||  | |||| |||||||||||| |||||||||||| |||||||| ||||||| |||| ||| ||||||||||    
T  15818550 aattgtaatcagtggagtagttaaattggatgaaatttaataaataaaggcataatagtggaaacaagtaattaatgttgcattggt 15818636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 40530192 - 40530402
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||| ||||||||| || | |||||||||||||   |||||||||||||| ||||||||||| ||||||||||||| |||||||||||||   |||||    
T  40530192 aatatttgtcgtttaaggtctgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttatt 40530291  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt-tgaaacaaataataaatattgcattggtgttgcattgtaa 204  Q
    ||||||||||||||||    ||||||||||||||||| ||||||||| |||||||||||  |||| |||||||||||  |||||||||     |||||||    
T  40530292 aattgtagttagtggagtggttaagttggatgaaattaaataaataagggtataatagtgggaaataaataataaatgctgcattggt-----attgtaa 40530386  T
Q  205 agtgacaattactttg 220  Q
    ||||||||||| ||||    
T  40530387 agtgacaattattttg 40530402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 164
Target Start/End: Complemental strand, 29570537 - 29570379
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||||||||||| ||||||| |||  |||||||| |||||||| ||||||||  ||||||    
T  29570537 aatattagtcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattttaatgttaaaattattagtatttgctaaaacacctttatt 29570438  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||||  ||||||||||    
T  29570437 aattgtagttaatggaatagttaagttggatgaaattcaataaataagagtataatagt 29570379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 6753632 - 6753812
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||| |||||||||||||   |||||||||||| |||| |||||||| ||||||||||||  ||||||||||| |   ||||||||||    
T  6753632 tagtcgtttaaggtttatgcacgattattaagaaaatgattaatt-tattaatttcaatggtaaaattagtatcatttactaaaatacccttattaattg 6753730  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||||  | ||||||||||||||||| ||||||||| ||||||||| | |||| | ||||||||| ||||||||||    
T  6753731 tagttagtggagtagttaagttggatgaaatttaataaataagggtataataatggaaaaagataataaatgttgcattggt 6753812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 8724987 - 8725133
Alignment:
Q  16 gtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtt 115  Q
    |||||| |||| ||||||||||||| |||||||||||||||| ||||||||||| ||||||||| ||  ||||||||||||| | |||||||||||||||    
T  8724987 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacacacttattaattgtagtt 8725086  T
Q  116 agtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||  | |||| ||| ||||||||||||||||||  ||||||||    
T  8725087 agtggagtagttaacttgaatgaaattcaataaataatagtataata 8725133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 220
Target Start/End: Original strand, 6615870 - 6616057
Alignment:
Q  28 tgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaatt 127  Q
    ||||||||||||| | |||| ||||||||| ||||||||||| ||||||||||||| |||||| |||||||  ||||||||| |||||||||||    ||    
T  6615870 tgcacgattattaaataaataattaattgtgttgatttcaatggtaaaattagtagcatttaccaaaacatccttattaattttagttagtggagtggtt 6615969  T
Q  128 aagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcattggtgttgcattgtaaagtgacaattactttg 220  Q
    |||||||||| |||||||||||||| ||||||||||| | ||| ||||||||||| |||||| |||     |||||||||||||||||| ||||    
T  6615970 aagttggatg-aattcaataaataagggtataatagtggaaaaaaaataataaatgttgcataggt-----attgtaaagtgacaattattttg 6616057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 42803598 - 42803744
Alignment:
Q  16 gtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtt 115  Q
    |||||| |||| ||||||||||| | |||||| ||||||||| || |||||||| |||||||||||||||||||||||||||   |||||||||||||||    
T  42803598 gtttaaggtttatgcacgattatcaaagaaataattaattgtgttcatttcaattgtaaaattagtagtatttactaaaacaccattattaattgtagtt 42803697  T
Q  116 agtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    | ||||    |||||||||||||||||||||||||||  ||||||||    
T  42803698 aatggagtggttaagttggatgaaattcaataaataagagtataata 42803744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 4441128 - 4440991
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||| ||||||||| ||||||| |||  |||||||| || |||||||||||| || ||||||||||||||||||||||  | |||| |||||||||||||    
T  4441128 aaataattaattgtgttgattttaatgataaaattaatattatttactaaaatatttttattaattgtagttagtggagtagttaaattggatgaaattc 4441029  T
Q  144 aataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||||||| ||||||||||| |||| |||||||||||    
T  4441028 aataaataacggtataatagtagaaaaaaataataaat 4440991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 21060775 - 21060619
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| |||||| ||||||  ||||||||||||||| || ||||  || |||||||||||| |||||||||||| |   |||||    
T  21060775 aataatagtcgtttaaggtttatgcacggttattagggaaatgattaattgtgtttattttgatggtaaaattagtattatttactaaaatactcttatt 21060676  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||||||||||  | ||||||||||| ||||||||||||||| |||||||||    
T  21060675 aattgtagttagtggagtagttaagttggataaaattcaataaataatggtataata 21060619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 179
Target Start/End: Original strand, 2232046 - 2232210
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||| |||||||||||||   |||||| ||||||| ||||||||||| ||||||||||||| ||||| ||||| |   |||||||||     
T  2232046 tagtcgtttaaggtttgtgcacgattattaagaaaatgaataattgtgttgatttcaatggtaaaattagtagcatttattaaaaaactcttattaatt- 2232144  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataa 179  Q
       ||||||||  | ||||||||||||||||||||||||||| ||||||||||| |||| |||||||||    
T  2232145 ---ttagtggagtagttaagttggatgaaattcaataaataagggtataatagtagaaaaaaataataa 2232210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 181
Target Start/End: Complemental strand, 40900063 - 40899888
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||| ||||| |||| |||||| ||||||  ||||||||||||||| |||||||  || | ||||||||||  |||||||||||||   |||||    
T  40900063 aataatagtcatttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggcaaaattagtatcatttactaaaacacccttatt 40899964  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||||||||||||||  | ||||||| ||||||||||||||||||| ||||||||| | ||||  ||||||||||    
T  40899963 aattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaataataataaat 40899888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 164
Target Start/End: Original strand, 22848352 - 22848510
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| | || | || ||||||||  |||  |||||||||| ||||||||||||||||||||| ||||||||| |||||||   |||||    
T  22848352 aatattagtcgtttaaggcttgtacaagattattaaggaagcgattaattgtgttgatttcaatagtaaaattaatagtatttattaaaacacccttatt 22848451  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    ||||||||||| ||||  | |||  |||||||||||||||||||||| |||||||||||    
T  22848452 aattgtagttaatggagtagttagattggatgaaattcaataaataagggtataatagt 22848510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 27542933 - 27542784
Alignment:
Q  13 gtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgta 112  Q
    ||||||||| |||| |||||||||||||  ||||||||| ||||| ||||||||||| ||||||||| ||  ||||||||||| |   ||||||||||||    
T  27542933 gtcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaataccatttactaaaatactcttattaattgta 27542834  T
Q  113 gttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||||||  | ||||||||||| |||||||||||||||  ||||||||    
T  27542833 gttagtggagtagttaagttggataaaattcaataaataagagtataata 27542784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 7827902 - 7828078
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    |||||||| |||| | |||||||||||   |||| ||||||||| ||||||||||| ||||||||||||  ||||| ||||| |   |||||||||||||    
T  7827902 tcgtttaaggtttgtacacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtatcatttattaaaatacccttattaattgtag 7828001  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||  | ||||||||||||||||| ||||||||| | ||||||| |  ||| | ||||||||||||||||||    
T  7828002 ttagtggagtagttaagttggatgaaatttaataaataaggatataataatgaaaaaagataataaatattgcattg 7828078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 19930069 - 19929905
Alignment:
Q  28 tgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaatt 127  Q
    |||||||||||||   |||||||||||| | |||||||  || |||||| |||    ||||||||||||||  ||||||||||||||||||| || | ||    
T  19930069 tgcacgattattaagaaaatgattaattttgttgattttgatggtaaaactagcgtcatttactaaaacatccttattaattgtagttagtgaaatagtt 19929970  T
Q  128 aagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||||||||||||||||| ||||||||| | ||||  |||||||||| ||||||||||    
T  19929969 aagttggatgaaattcaataaataagggtataataatggaaaataataataaatgttgcattggt 19929905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 6315750 - 6315931
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| | || | | |||||||||  ||||||||| ||||| || ||||||||  |||||||| ||  ||||||||||| |   ||||||||||    
T  6315750 tagtcgtttaagggttgtactcgattattaaggaaatgattgattgtgttaatttcaatgataaaattaatatcatttactaaaatacccttattaattg 6315849  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||| |  | ||||||||||||||||||||||||||| ||||||||| | ||||  |||||||||| ||||||||||    
T  6315850 tagttagtgaagtagttaagttggatgaaattcaataaataagggtataataatggaaaataataataaatgttgcattggt 6315931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 192
Target Start/End: Complemental strand, 6754135 - 6753988
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||| | ||||||||||||||||||||| |   |||||||||||||   |||||||||||||||||||||  | ||||||||||||||||||    
T  6754135 aaatgattaatt-tgttgatttcaatagtaaaattaatgtcatttactaaaacactcttattaattgtagttagtggagtagttaagttggatgaaattc 6754037  T
Q  144 aataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||| |||||| |  | |||| ||| || |||| ||||||||||    
T  6754036 aataaataagggtatattgatggaaaaaaaaaaaaaatgttgcattggt 6753988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 30512658 - 30512809
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaa-tt 109  Q
    ||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||| |||||||||  |  ||||||||| | |   |||||||  |    
T  30512658 tagtcgtataaagtttatgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattaacatcatttactaagatactcttattaacat 30512757  T
Q  110 gtagttagtggaacaattaagttggatgaaattcaataaataaaggtataat 161  Q
    |||||||||| || | ||||||||||||||||| ||||||||| | ||||||    
T  30512758 gtagttagtgaaatagttaagttggatgaaatttaataaataaggatataat 30512809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 30552998 - 30553149
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaa-tt 109  Q
    ||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||| |||||||||  |  ||||||||| | |   |||||||  |    
T  30552998 tagtcgtataaagtttatgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattaacatcatttactaagatactcttattaacat 30553097  T
Q  110 gtagttagtggaacaattaagttggatgaaattcaataaataaaggtataat 161  Q
    |||||||||| || | ||||||||||||||||| ||||||||| | ||||||    
T  30553098 gtagttagtgaaatagttaagttggatgaaatttaataaataaggatataat 30553149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 27580735 - 27580589
Alignment:
Q  17 tttaaagtttttgcacgattattatag-aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtt 115  Q
    ||||| |||| |||||||||| | ||| |||||||||||||| ||||||||||| ||||||||| ||  ||||||||||| |   |||||||||||||||    
T  27580735 tttaaggtttctgcacgattaatttaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattgtagtt 27580636  T
Q  116 agtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||  | |||||||| |||||||| | |||||||| ||||||||    
T  27580635 agtggagtagttaagttgaatgaaattaattaaataaatgtataata 27580589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 164
Target Start/End: Complemental strand, 29374487 - 29374329
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |  | | ||||||   |||||||||||| | |||||||||||  |||||||| ||| ||||||||||| |  ||||||    
T  29374487 aatattagtcgtttaaggtttatttaaggttattaagaaaatgattaattatgttgatttcaatgataaaattaatagcatttactaaaagacctttatt 29374388  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    ||||||||||||||||  | |||| ||| || ||||||||||||||| |||||||||||    
T  29374387 aattgtagttagtggagtagttaaattgaataaaattcaataaataagggtataatagt 29374329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 9515891 - 9515708
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattataga-aatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttat 104  Q
    |||||||||||||||| |||| ||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||||||  ||||||||||||||  ||||    
T  9515891 aatattagtcgtttaaggtttgtgcacgattatta-agataatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaaacatccttat 9515793  T
Q  105 ta----------attgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataa 179  Q
    ||          || ||||||||||||  | |||||||| |||||||||| |||||||  |||||||||| ||||  ||||||||    
T  9515792 taatagtaggtcatagtagttagtggagtagttaagttgaatgaaattcattaaataagagtataatagtggaaaataataataa 9515708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 1248577 - 1248756
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||||||||  ||| |||||| ||||||  ||||| ||||||| | ||||||||||| ||||||||| ||  ||||||||||| |   ||||||||||    
T  1248577 tagtcgtttaagatttgtgcacggttattaaggaaattattaattatgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattg 1248676  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||| |  | |||||||| || ||||||||| ||||| ||||||||| |  |||  |||||||||| ||||||||    
T  1248677 tagttagtgaagtagttaagttgaataaaattcaattaataagggtataataatgaaaaataataataaatgttgcattg 1248756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 190
Target Start/End: Original strand, 37184085 - 37184229
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||||  ||||||||||| ||||||||| ||  ||||||||||| || |||||| |||||||||| | ||   |||||||| ||||||||||    
T  37184085 aaatgattaattgagttgatttcaatggtaaaattaatatcatttactaaaatatctttattcattgtagttaatagactgattaagtttgatgaaattc 37184184  T
Q  144 aataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||||  ||||||| || ||  |||||||||||||| |||||    
T  37184185 aataaataaatatataataatttaa--aaataataaatatttcattg 37184229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 41062194 - 41062313
Alignment:
Q  72 taaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaaca 171  Q
    |||||||||||  |||||||||||||   |||||||||||||||||| ||| ||||||| |||||| | |||||||||||| ||||| ||| | |||| |    
T  41062194 taaaattagtatcatttactaaaacacccttattaattgtagttagtagaataattaagctggatggagttcaataaataagggtattataatggaaa-a 41062292  T
Q  172 aataataaatattgcattggt 192  Q
    |||||||||| ||||||||||    
T  41062293 aataataaatgttgcattggt 41062313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 189
Target Start/End: Original strand, 15439324 - 15439469
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    |||||||||||||||||| |||||||| ||||||||||||  ||||||||||| |  ||||||||||||| |||| | |  | ||||||| |||  ||||    
T  15439324 gaaatgattaattgtattaatttcaatggtaaaattagtatcatttactaaaatacttttattaattgtatttagagtagtagttaagtttgat-taatt 15439422  T
Q  143 caataaataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
     ||||||||| ||||||||| || |||  |||||||||| |||||||    
T  15439423 taataaataagggtataataattaaaaataataataaatgttgcatt 15439469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 18841586 - 18841477
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||| ||||||||| ||| ||||||||| ||  ||||| ||||| |   ||||||||||||||||||| || |||||| |||| ||||||||    
T  18841586 aaatgattaattatattgatttaaatggtaaaattaatatcatttaataaaataccgttattaattgtagttagtgaaataattaaattgggtgaaattc 18841487  T
Q  144 aataaataaa 153  Q
    ||||||||||    
T  18841486 aataaataaa 18841477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 176
Target Start/End: Original strand, 11796173 - 11796305
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    ||||| |||||||| ||||||| |||  |||||||| || |||||||||||| ||  ||||||||||||||||||| |  | ||||||| |||||||||     
T  11796173 aaatggttaattgtgttgattttaatgataaaattaatattatttactaaaatattattattaattgtagttagtgtagtagttaagttagatgaaattt 11796272  T
Q  144 aataaataaaggtataatagttgaaacaaataa 176  Q
    |||||||||  ||||| |||| |||| ||||||    
T  11796273 aataaataagagtatactagtggaaaaaaataa 11796305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 41478810 - 41478744
Alignment:
Q  126 ttaagttggatgaaattcaataaataaaggtataatagttgaaaca--aataataaatattgcattg 190  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |  |||||||||| ||||||||    
T  41478810 ttaagttggatgaaattcaataaataaaggtataatagtagaaaaaataataataaatgttgcattg 41478744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 41480176 - 41480124
Alignment:
Q  126 ttaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataa 179  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  41480176 ttaagttggatgaaattcaataaataaaggtataatag-tgaaaaaaataataa 41480124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 41478972 - 41478815
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatat-ttat 104  Q
    |||| ||||||| ||| |||| ||| ||||| |||   ||||||||||||||  | |||||||| |||||||||||   ||||||||||| ||   || |    
T  41478972 aataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagtgtcatttactaaaatatcccttgt 41478873  T
Q  105 taattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatag 163  Q
    |||||| ||||| ||||  | ||||||| ||||||||||||||||||| ||||||||||    
T  41478872 taattgcagttaatggat-agttaagttagatgaaattcaataaataagggtataatag 41478815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 41492447 - 41492290
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatat-ttat 104  Q
    |||| ||||||| ||| |||| ||| ||||| |||   ||||||||||||||  | |||||||| |||||||||||   ||||||||||| ||   || |    
T  41492447 aataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagtgacatttactaaaatatcccttgt 41492348  T
Q  105 taattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatag 163  Q
    ||| |||||||| ||||  | ||||||| ||||||||||||||||||| ||||||||||    
T  41492347 taaatgtagttaatggat-agttaagttagatgaaattcaataaataagggtataatag 41492290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 3348176 - 3348284
Alignment:
Q  84 tatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatat 183  Q
    |||||| |||||||   ||||||| ||||||| ||| |  |||||||||||||||| |||||||||||| | ||| ||| | |||| |||||||||||      
T  3348176 tatttattaaaacacccttattaaatgtagttggtgaagtaattaagttggatgaagttcaataaataaggatattataatggaaaaaaataataaatgc 3348275  T
Q  184 tgcattggt 192  Q
    |||||||||    
T  3348276 tgcattggt 3348284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 32440286 - 32440174
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||||| || |||| |||| |||| ||| |||||||||||||||| || ||||||||  |||||||| ||  ||||||||||| |   |||||    
T  32440286 aataatagtcgttaaaggtttgtgcatgatttttaaagaaatgattaattgtgttaatttcaatgataaaattaatatcatttactaaaatacccttatt 32440187  T
Q  106 aattgtagttagt 118  Q
    ||||||| |||||    
T  32440186 aattgtacttagt 32440174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 11904346 - 11904192
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaa-tgattaattgtattgatttcaatagtaaaattagtagtatttactaaaaca-tatttattaat 108  Q
    ||||||||||| |||| ||||||||  ||| ||||| |||||||||||||||| ||||||| |||||||| ||  ||||||||||| | | ||  |||||    
T  11904346 tagtcgtttaatgtttgtgcacgatcttta-agaaagtgattaattgtattgagttcaataataaaattaatatcatttactaaaatactcttatttaat 11904248  T
Q  109 tgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    ||||||| |||||  | |||| || ||| ||| ||||||| ||| | |||||||||    
T  11904247 tgtagttggtggagtagttaaattcgataaaaatcaataattaaggctataatagt 11904192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 41492285 - 41492248
Alignment:
Q  126 ttaagttggatgaaattcaataaataaaggtataatag 163  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  41492285 ttaagttggatgaaattcaataaataaagatataatag 41492248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 10598228 - 10598294
Alignment:
Q  126 ttaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||| ||||| ||||||||||| ||||| |||||||| ||| ||||| || | |||||||    
T  10598228 ttaagttggataaaatttaataaataaagatataacagttgaaaaaaaaaataactactacattggt 10598294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 158
Target Start/End: Original strand, 26285484 - 26285598
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    ||||||||| |||  ||||||| ||  ||||||||||||  |||||  |||||| |  ||||||||||||||| || |  | |||||||| || ||||||    
T  26285484 aaatgattagttgacttgattttaacggtaaaattagtatcatttatgaaaacacacgtattaattgtagttaatgaagtagttaagttgtataaaattc 26285583  T
Q  144 aataaataaaggtat 158  Q
    |||||||||| ||||    
T  26285584 aataaataaatgtat 26285598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 2588036 - 2588112
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagta 82  Q
    |||| ||||||||||| |||  |||||  ||||||  ||||||||||||||| |||||||  || ||||||||||||    
T  2588036 aataatagtcgtttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 2588112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 37101274 - 37101347
Alignment:
Q  107 attgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaata 182  Q
    |||||||||||| ||  |||||| || ||||||||||||||||||||  ||||||| |  ||| ||||||||||||    
T  37101274 attgtagttagtagagtaattaaatttgatgaaattcaataaataaaaatataataat--aaaaaaataataaata 37101347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 38161459 - 38161515
Alignment:
Q  85 atttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaat 141  Q
    ||||||||||| ||  |||||||| ||||||||||||  | ||||||||||||||||    
T  38161459 atttactaaaatatccttattaatcgtagttagtggagtagttaagttggatgaaat 38161515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 38508155 - 38508231
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagta 82  Q
    |||| |||||||||||  ||| ||| ||||| |||   |||||||||||||| || |||||||| ||||||||||||    
T  38508155 aataatagtcgtttaagatttgtgctcgatttttaagaaaatgattaattgtgttaatttcaatggtaaaattagta 38508231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 6e-49; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 22738853 - 22738668
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||||||||| | ||||||||| ||||||||||||  ||||||||||| ||  | |||    
T  22738853 aatattagtcgtttaaggtttatgcacgattattaaagaaatgattaattgtgtagatttcaatggtaaaattagtatcatttactaaaatatcctcatt 22738754  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||||| ||  | ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||| || |||||||    
T  22738753 aattgtagttagtagattagttaagttggatgaaatttaataaataaaggtataatagtggaaa-aaataataaatgttccattggt 22738668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 34947652 - 34947466
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| |||| | |||||| |||||||||||||||| ||||||||||| ||||||||| ||  |||||||||||||   |||||    
T  34947652 aataatagtcgtttaaggtttgtgcatgtttattaaagaaatgattaattgtgttgatttcaatggtaaaattattatcatttactaaaacacccttatt 34947553  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||||||||  | ||||||||||||||||||||||||| | ||||||||| | |||| ||||||||||| ||||||||||    
T  34947552 aattgtagttagtggagtagttaagttggatgaaattcaataaatgagggtataataatggaaaaaaataataaatgttgcattggt 34947466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 21350605 - 21350812
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||||||||||||  |||||   ||||||| ||||||||||| |||||| |||| |||||||||||||||   |||||    
T  21350605 aatattagtcgtttaaggtttgtgcacgattattaaggaaat---taattgtgttgatttcaatggtaaaaatagttgtatttactaaaacacccttatt 21350701  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcattggtgttgcattgtaa 204  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||| ||||||||||| | ||| |||||||||||  |||||||||     |||||||    
T  21350702 aattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaatgctgcattggt-----attgtaa 21350796  T
Q  205 agtgacaattactttg 220  Q
    ||||||||||| ||||    
T  21350797 agtgacaattattttg 21350812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 11373405 - 11373589
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| | || |||||||||||||  |||||| |||||||| |||||||| || ||||||||||||| |||||||||||||   |||||    
T  11373405 aatattagtcgtttaaggattgtgcacgattattaaggaaatgtttaattgtgttgatttcgatggtaaaattagtagcatttactaaaacacccttatt 11373504  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||||||||||  | |||||||||||||||||||||||||||  |||||||||| | || |||||||||||  |||||||    
T  11373505 aattgtagttagtggagtagttaagttggatgaaattcaataaataagagtataatagtgggaaaaaataataaatgctgcattg 11373589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 2459621 - 2459437
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||||||||||||  ||||||||||||||| ||||||||||  |||||||||||   |||||||| ||||   |||||    
T  2459621 aatattagtcgtttaatgtttgtgcacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattagtc--atttactacaacacccttatt 2459524  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||||||||  | |||||| |||||||||||||||||||| |||||||||||  ||| |||||||||||  |||||||||    
T  2459523 aattgtagttagtggagtagttaagtaggatgaaattcaataaataagggtataatagtgaaaaaaaataataaatgctgcattggt 2459437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 34100524 - 34100728
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||| ||||||  ||| |  ||||||||||   |||||||||||||| ||||||||||||||||||||||||| ||||||||||| || ||||||    
T  34100524 aatattagttgtttaagatttgtcaacgattattaagaaaatgattaattgtgttgatttcaatagtaaaattagtagcatttactaaaatatctttatt 34100623  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaa 205  Q
    ||||||||||| || |  | ||||||||||||| ||||||||||||| |||||||||||  ||| | ||||||||| ||||||| ||     ||||||||    
T  34100624 aattgtagttactgaagtagttaagttggatgacattcaataaataagggtataatagtgaaaaaacataataaatgttgcattagt-----attgtaaa 34100718  T
Q  206 gtgacaatta 215  Q
    ||||||||||    
T  34100719 gtgacaatta 34100728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 41506054 - 41506226
Alignment:
Q  18 ttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttag 117  Q
    |||| |||| |||||||||||||  ||||||||||||||| || |||| ||| ||||||||||||| |||||||||||||   |||||||||||||||||    
T  41506054 ttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttaatggtaaaattagtagcatttactaaaacactcttattaattgtagttag 41506153  T
Q  118 tggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaa-taataaatattgcattg 190  Q
    ||||  | |||||||||||||||||||||||||||  |||||||| |||||| ||| |||||||||||||||||    
T  41506154 tggagtagttaagttggatgaaattcaataaataagagtataata-ttgaaaaaaattaataaatattgcattg 41506226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 8592417 - 8592601
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||| ||||||| |||| |||| |||||||| |||||||||||||||| ||||||||||| || |||||||||||||||| |||||||   |||||    
T  8592417 aatattagccgtttaaggtttgtgcatgattattaaagaaatgattaattgtgttgatttcaatggttaaattagtagtatttaataaaacacccttatt 8592516  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||||||||||  | | ||||| ||||||||| |||||||||  |||||||||| | || |||||||||||  |||||||    
T  8592517 aattgtagttagtggagtagtaaagttagatgaaatttaataaataagagtataatagtaggaaaaaataataaatgctgcattg 8592601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 24516270 - 24516450
Alignment:
Q  10 ttagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaatt 109  Q
    |||||||||||| |||| | |||||||||||   |||||||||||||| ||||||||||| ||||||||||||  ||||||||||| |   |||||||||    
T  24516270 ttagtcgtttaaggtttatacacgattattaataaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaaaaaaaccttattaatt 24516369  T
Q  110 gtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||||||  | ||||||||||||||||||||||||||||| || |||||| | || | ||||||||| ||||||||    
T  24516370 gtagttagtggagtagttaagttggatgaaattcaataaataaagataaaatagtgggaaaagataataaatgttgcattg 24516450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 759068 - 759254
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||| ||||| |||| ||||| |||||||  ||||||||||||||| |||||||  || |||||| |||||  ||||||||||||||  |||||    
T  759068 aataatagtcatttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaactagtatcatttactaaaacatccttatt 759167  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||||| |||  | ||||||||||||||||||||||||||| ||||||||| | |||| |||||||||||  |||||||||    
T  759168 aattgtagttagcggagtagttaagttggatgaaattcaataaataagggtataataatggaaaaaaataataaatgctgcattggt 759254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 19271714 - 19271895
Alignment:
Q  10 ttagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaatt 109  Q
    |||||||||||| | || ||||||||||||| | |||||||||||||| |||||||||||  | |||||||| | ||| ||||||| |  ||||||||||    
T  19271714 ttagtcgtttaatgcttgtgcacgattattaaaaaaatgattaattgtgttgatttcaatgatcaaattagtggcattgactaaaatacttttattaatt 19271813  T
Q  110 gtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||||||  | ||||||||||||||| | ||||||||| ||||||||| ||| || ||||||||||| ||||||||||    
T  19271814 gtagttagtggagtagttaagttggatgaaaattaataaataagggtataata-ttggaaaaaataataaatgttgcattggt 19271895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 28103885 - 28103712
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||| ||||||||| |||| |||||||||||||   |||||||||||||| ||||||||||| |||||||||| || |||||| ||||||   |||||    
T  28103885 aatatttgtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagcagcatttaccaaaacacccttatt 28103786  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataa 179  Q
    |||||||||||||| |    |||||||||||||||||||||||||||  |||||||||| |||| ||| |||||    
T  28103785 aattgtagttagtgaagtggttaagttggatgaaattcaataaataagcgtataatagtggaaaaaaaaaataa 28103712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 5524532 - 5524366
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||| |||||||||||||| |||||||||||||   |||||||||||||| ||||||||||| ||||||||||||  ||||| |||||||  ||||||    
T  5524532 aatatttgtcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtaacatttaataaaacacttttatt 5524433  T
Q  106 aattgtagttagtggaacaattaagttggatgaaat---tcaataaataaaggtataatagttgaaa 169  Q
    |||| |||||||| ||  | ||||||||||||||||   | ||||||||||||||||||||| ||||    
T  5524432 aattatagttagttgagtagttaagttggatgaaatttattaataaataaaggtataatagtggaaa 5524366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 7463365 - 7463155
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| | || |||||| ||||||  ||||||||||||||| |||||||||||  |||||||||||| ||||||| ||| |   | |||    
T  7463365 aatattagtcgtttaaggattgtgcacggttattaaggaaatgattaattgtgttgatttcaatgataaaattagtagcatttacttaaataccctcatt 7463266  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaa 205  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||| || ||||||  |||  ||||||||||  ||||||  ||||  ||||||||    
T  7463265 aattgtagttagtggagtagttaagttggatgaaattcaataaataaagatagaatagtgaaaaataataataaatgatgcatt--tgtt--attgtaaa 7463170  T
Q  206 gtgacaattactttg 220  Q
    ||||| |||| ||||    
T  7463169 gtgacgattattttg 7463155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 38391892 - 38391744
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    |||||||| |||| ||||| |||||||   |||||||||||||| |||||||  || ||||||||||||  |||||||||||||   || ||||||||||    
T  38391892 tcgtttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacactcttgttaattgtag 38391793  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  38391792 ttagtggaataattaagttggatgaaattcaataaataaaagtataata 38391744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 188
Target Start/End: Original strand, 46478270 - 46478453
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||||||||||||||  | |||||||||||   |||||||||||||| || |||| ||||||||| ||||||| ||||||||||| |   |||||    
T  46478270 aatattagtcgtttaaagttcatacacgattattaattaaatgattaattgtgttaattttaatagtaaagttagtagcatttactaaaatacccttatt 46478369  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcat 188  Q
    ||||||||||| | ||  | |||||||||||||||||||||||||||  |||||||||| | ||| ||||||||||| ||||||    
T  46478370 aattgtagttaattgagtagttaagttggatgaaattcaataaataagagtataatagtggaaaaaaaataataaatgttgcat 46478453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 7457398 - 7457581
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||  ||||| |||| ||||||||||||| | |||||||||||| | ||||||||||| |||||||||||   ||||||||||| |   |||||    
T  7457398 aatattagttatttaatgtttgtgcacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagttacatttactaaaagacccttatt 7457497  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    || ||||||||| |||| |||||||||  || |||||||||||||||  |||||||||| |||| ||||||||||| ||||||||    
T  7457498 aaatgtagttagcggaataattaagttaaattaaattcaataaataagagtataatagtggaaa-aaataataaatgttgcattg 7457581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 83537 - 83350
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| ||||| |||||||  ||||||||||||||| |||||||  || ||||||||||||  ||||||||||||||  |||||    
T  83537 aataatagtcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacattcttatt 83438  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcattggt 192  Q
    |||||||||||| |||  | ||||||| |||||||||||||||||||  |||| ||| | | ||| |||||||||||  |||||||||    
T  83437 aattgtagttagcggagtagttaagtttgatgaaattcaataaataagagtatgataatggaaaaaaaataataaatgctgcattggt 83350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 12631454 - 12631345
Alignment:
Q  9 attagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaat 108  Q
    ||||||| ||||| |||| |||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||||    
T  12631454 attagtcatttaaggtttgtgcacgattattaaggaaataattaattgtattgatttcaatagtaaaattagtagtatttatcaaaacatccttattaat 12631355  T
Q  109 tgtagttagt 118  Q
    ||||||||||    
T  12631354 tgtagttagt 12631345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 21390441 - 21390260
Alignment:
Q  12 agtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgt 111  Q
    |||||||||| |||| |||||||||||||  ||||||||||||||| || ||||  || |||||| || ||  ||||||||||||||  ||||| |||||    
T  21390441 agtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttgatggtaaaactaatatcatttactaaaacatccttattgattgt 21390342  T
Q  112 agttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcattggt 192  Q
    ||||||||||  | ||||||| ||||||||||||||||||| ||||||||| | | ||| ||||||||||  ||||||||||    
T  21390341 agttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaaaaaataataaacgttgcattggt 21390260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 40076467 - 40076284
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| ||||||||||||| |||||||||||||||| || ||||  || ||||||||||||  |||||||||||||   |||||    
T  40076467 aataatagtcgtttaaggtttatgcacgattattaaagaaatgattaattgtgttaattttgatggtaaaattagtatcatttactaaaacactattatt 40076368  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||| |||   ||  | ||||||||||||||||||||||||||| ||| | ||| | |||| |||||||||||  |||||||||    
T  40076367 aattgtactta---gattagttaagttggatgaaattcaataaataagggtgtgataatggaaaaaaataataaatgctgcattggt 40076284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 3178186 - 3178358
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||| |||||| |||| |||| ||||||||   |||||||| ||||| |||||||  || ||||||||| ||  |||||||||||||  |||||||||||    
T  3178186 tagttgtttaaggtttgtgcatgattattaagtaaatgattgattgtgttgattttgatggtaaaattaatatcatttactaaaacacctttattaattg 3178285  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatat 183  Q
    |||||||||||  | ||||||||||||||||||||||||||| |||||| || | | || | |||||||||||    
T  3178286 tagttagtggagtagttaagttggatgaaattcaataaataagggtatattaatgggaaaacataataaatat 3178358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 9786140 - 9785984
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| || | |||||||||||||  ||||||||||||||| |||||||  || ||||||||| |   |||||||||||||   |||||    
T  9786140 aataatagtcgtttaaggtctgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattaatttcatttactaaaacacgcttatt 9786041  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||||||||||| |  | ||||||||||| ||||||||||||||| |||||||||    
T  9786040 aattgtagttagtgaagtagttaagttggataaaattcaataaataagggtataata 9785984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 220
Target Start/End: Complemental strand, 37245799 - 37245633
Alignment:
Q  48 gattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaata 147  Q
    |||||||| | ||||||||||| ||||| ||||||| |||||||||||||   |||||||||||| | ||||||    ||||||||||||||||||||||    
T  37245799 gattaattctgttgatttcaatggtaaa-ttagtagcatttactaaaacactcttattaattgtaataagtggagtggttaagttggatgaaattcaata 37245701  T
Q  148 aataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaagtgacaattactttg 220  Q
    ||||| |||||||||||   || ||||||||||| ||||||||||     |||||||||||||||||| ||||    
T  37245700 aataagggtataatagtgagaaaaaataataaatgttgcattggt-----attgtaaagtgacaattattttg 37245633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 28202286 - 28202461
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||| |||||| |||| |||||| ||||||   |||| ||||||||| |||||||  || ||||||||| |   ||||||||||||||  |||||    
T  28202286 aataatagttgtttaaggtttatgcacggttattaagaaaataattaattgtgttgattttgatggtaaaattaatgtcatttactaaaacatccttatt 28202385  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||||||||||||||  | | |||||||||||||||||||||||||  |||||||| | |||| |||||||||||    
T  28202386 aattgtagttagtggagtagtaaagttggatgaaattcaataaataagagtataataatggaaaaaaataataaat 28202461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 29835391 - 29835565
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||| |||||||| |||| ||| || ||||||  ||||||||||||| | ||||||| ||| ||||||||||||| |||||||||||||   |||||    
T  29835391 aatattaatcgtttaaggtttgtgcgcgcttattaaggaaatgattaattatgttgatttaaatggtaaaattagtagcatttactaaaacactcttatt 29835490  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||| |||||  |||  | || ||||||||| |||||||||||||||| ||||||||| |||  |||||||||||    
T  29835491 aattgcagttaacggagtagtt-agttggatgtaattcaataaataaagatataatagtggaacaaaataataaat 29835565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 30866110 - 30865963
Alignment:
Q  15 cgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagt 114  Q
    ||||||| |||| ||||||||||||| |||||||||||||||| || |||||||| ||| ||||| ||  ||||||||||| |   ||||||||| || |    
T  30866110 cgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttaatttcaatggtataattaatatcatttactaaaatactcttattaattataat 30866011  T
Q  115 tagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||||  | ||||||| ||||||||||||||||||||| |||||||    
T  30866010 tagtggagtagttaagttagatgaaattcaataaataaagatataata 30865963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 26974176 - 26974020
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagt---agtatttactaaaacatatttattaa 107  Q
    ||||||||||| |||| |||||||||||||  ||||||||||||||| ||||||||||| ||||||||| |   |  ||||||||||| |   |||||||    
T  26974176 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatcatttactaaaatactcttattaa 26974077  T
Q  108 ttgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    ||||||||||||||  | |||||||| |||||||| | |||||||| ||||||||||    
T  26974076 ttgtagttagtggagtagttaagttgaatgaaatttattaaataaatgtataatagt 26974020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 16904531 - 16904359
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| ||||  ||| |||   |||||||||||||| ||||||||||||||||||||| ||  | || |||||| |    ||||    
T  16904531 aataatagtcgtttaaggtttgtgcaaaatttttaagaaaatgattaattgtgttgatttcaatagtaaaattattatcactttctaaaatactcgtatt 16904432  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataa 179  Q
    |||| ||||||||| || ||||||||||||| ||||||||||||||| ||||||||||| |||| |||||||||    
T  16904431 aattatagttagtgaaataattaagttggatcaaattcaataaataagggtataatagtggaaa-aaataataa 16904359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 220
Target Start/End: Complemental strand, 33819341 - 33819155
Alignment:
Q  31 acgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaag 130  Q
    ||||||||||  ||||||||||||||| ||||||||||| ||||||||||||| |||||| ||| ||   ||||||||||| ||| |||||  | | |||    
T  33819341 acgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttacaaaatcactcttattaattgttgtttgtggagtagtgaag 33819242  T
Q  131 ttggatgaaattcaataaataaaggtataatagttgaaaca--aataataaatattgcattggtgttgcattgtaaagtgacaattactttg 220  Q
    ||| |||||||||| ||||||| |||||||||||  ||| |  ||||||||||  |||||||||     |||||||||||||||||| ||||    
T  33819241 ttgaatgaaattcattaaataagggtataatagtgaaaataataataataaatgctgcattggt-----attgtaaagtgacaattattttg 33819155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 21759966 - 21760145
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||| |||| ||||||||   |||||||||||||| |||||||  || ||||||||||||  ||||| |||||||   ||| ||||||    
T  21759966 tagtcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttaataaaacacccttactaattg 21760065  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||||| ||||  | ||||||||||||||||||||||| | | |||||||||   |||| | ||||||||| ||||||||    
T  21760066 tagttaatggagtagttaagttggatgaaattcaataattgagggtataataaaggaaaaatataataaatgttgcattg 21760145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 43874070 - 43873891
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||  |||| | |||||| |||||||||||||||| |||||||  || ||||||||| ||  |||||||||||||   ||||||| ||    
T  43874070 tagtcgtttaaggttgatgcatggttattaaagaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaaatg 43873971  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||||||||||  | |||||||||||||| || |||||||||| |||| ||| | | || |||||||||||  |||||||    
T  43873970 tagttagtggagtagttaagttggatgaagtttaataaataaatgtattataatgggaaaaaataataaatgctgcattg 43873891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 23670637 - 23670481
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||| |||||||| |||| ||||| |||||||  | ||| ||||||||| |||||||| || ||||||||| ||| |||||||||||||   |||||    
T  23670637 aatattaatcgtttaaggtttgtgcacaattattaagggaat-attaattgtgttgatttccatggtaaaattaatagcatttactaaaacactcttatt 23670539  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatag 163  Q
    ||| ||||||||||||  | ||||||| ||||||||| |||||||||  |||||||||    
T  23670538 aatggtagttagtggagtagttaagtttgatgaaatttaataaataagagtataatag 23670481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 48609009 - 48608836
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||| | |||| |||| ||||||||  ||||||||||||||| |||||||  || |||||| |||||    ||||||||||||  |||||||| |    
T  48609009 tagtcgtttgaggtttatgcatgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta----ttactaaaacatccttattaatcg 48608914  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
    |||||||||    | |||||||||||||||||||||||||||  |||||||| | |||| |||||||||||| ||||||    
T  48608913 tagttagtgatgtagttaagttggatgaaattcaataaataagagtataataatggaaa-aaataataaatactgcatt 48608836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 32018689 - 32018865
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||| |||||| |||||| |||||| |||  ||||||| ||||||| ||||||||||||||||||||  ||  ||||||||||| |   |||||    
T  32018689 aataatagtcatttaaaatttttgtacgatttttaatgaaatgaataattgtgttgatttcaatagtaaaatttctatcatttactaaaatactcttatt 32018788  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt-tgaaacaaataataaat 181  Q
    |||||| |||||| ||  ||||||||||||| ||||| ||||||||| ||  |||||||  |||| |||||||||||    
T  32018789 aattgtcgttagtagagtaattaagttggattaaatttaataaataagggcttaatagtgggaaaaaaataataaat 32018865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 42935813 - 42935627
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||  |||||| ||||||   |||||||||||||| |||||||  || ||||||||| ||  |||||||||||||   |||||    
T  42935813 aataatagtcgtttaaggttgatgcacggttattaagaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttatt 42935714  T
Q  106 aattgtagttagt---ggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
    |||||||||||||   |||  | |||||||||||||| ||||||||||||  |||| ||| ||| || ||||||||||| |||||||    
T  42935713 aattgtagttagtggaggaggagttaagttggatgaagttcaataaataagagtattataattggaaaaaataataaatgttgcatt 42935627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 25571492 - 25571386
Alignment:
Q  85 atttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatatt 184  Q
    ||||||||||| |   |||||| ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||| || ||| ||||||||||| ||    
T  25571492 atttactaaaatacccttattagttgtagttagtggaatagttaagttggatgaaattcaataaataagggtataataatt-aaaaaaataataaatgtt 25571394  T
Q  185 gcattggt 192  Q
    ||||||||    
T  25571393 gcattggt 25571386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 6494976 - 6495067
Alignment:
Q  71 gtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||||||||  ||||||||||||||  ||||||||||||||||||||||  | | ||||||||||||||| ||||||||| |||||||||    
T  6494976 gtaaaattagtgttatttactaaaacacttttattaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggtataata 6495067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 181
Target Start/End: Original strand, 32018929 - 32019068
Alignment:
Q  43 gaaatgattaattgtattgatttc-aatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaat 141  Q
    ||||||||||||||| |||||||  ||||||||||||  ||  ||||||||||| |   ||||||||||| |||||||||  ||||||||||||||||||    
T  32018929 gaaatgattaattgtgttgattttgaatagtaaaatttctatcatttactaaaatactcttattaattgttgttagtggagtaattaagttggatgaaat 32019028  T
Q  142 tcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    | ||||||||| ||  ||||||| | || |||||||||||    
T  32019029 ttaataaataagggattaatagtgggaaaaaataataaat 32019068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 13962111 - 13961965
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||| ||||| |||| |||||| ||||||  ||||||||||||||| ||||||| |||  |||||||| ||  | ||| ||||| ||  |||||    
T  13962111 aataatagtcatttaaggtttatgcacgtttattaaggaaatgattaattgtgttgattttaatgataaaattaatatcacttaataaaatatccttatt 13962012  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    || |||||||||||||  | ||||||||||||||||| |||||||||    
T  13962011 aagtgtagttagtggagtagttaagttggatgaaatttaataaataa 13961965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 32346034 - 32346204
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||| |||||| |||| || ||| ||||||  ||||| ||| ||||| ||||||||||| ||||||||| ||  || |||||||| |   |||||||||     
T  32346034 tagttgtttaaggtttgtgtacggttattaaggaaataattgattgtgttgatttcaatggtaaaattaatatcatctactaaaatactcttattaatta 32346133  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    || ||||||||  | |||||||| |||||||||||||||||| ||||||||| | |||| | |||||||||    
T  32346134 taattagtggagtagttaagttgaatgaaattcaataaataagggtataataatggaaaaagataataaat 32346204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 16560547 - 16560679
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||| |||||  ||| |||||||||||||  ||||||||||||||| || ||||  || |||||| |||||  ||||||||||||||  |||||    
T  16560547 aataatagtcatttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagtatcatttactaaaacatccttatt 16560646  T
Q  106 aattgtagttagtggaacaattaagttggatga 138  Q
    |||||||||||||||   | |||||||||||||    
T  16560647 aattgtagttagtggggtagttaagttggatga 16560679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 16605115 - 16604983
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||| |||||  ||| |||||||||||||  ||||||||||||||| || ||||  || |||||| |||||  ||||||||||||||  |||||    
T  16605115 aataatagtcatttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagtatcatttactaaaacatccttatt 16605016  T
Q  106 aattgtagttagtggaacaattaagttggatga 138  Q
    |||||||||||||||   | |||||||||||||    
T  16605015 aattgtagttagtggggtagttaagttggatga 16604983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 31930479 - 31930622
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||||||||||||| ||||||||||||| |||||||||| | ||| ||||||| ||| |||||| || |   ||||  ||||| |   ||||||||||    
T  31930479 tagtcgtttaaagtttatgcacgattattaaagaaatgattgactgtgttgattttaatggtaaaactaatctaattttttaaaatacccttattaattg 31930578  T
Q  111 tagttagtgga--acaattaagttggatgaaattcaataaataa 152  Q
    |||||||||||  | | ||||||| |||||||||||||||||||    
T  31930579 tagttagtggagtatagttaagtttgatgaaattcaataaataa 31930622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 17828334 - 17828483
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    |||||||||||||||| |||||||| ||||  |||| ||||| || | ||||||||||| ||||||||| ||  |||||| |||  |   |||| |||||    
T  17828334 tagtcgtttaaagtttgtgcacgat-attaaggaaacgattatttttgttgatttcaatggtaaaattaatatcatttacaaaattactcttatcaattg 17828432  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||||||||  |||||||||||||| |||||||||||||| | |||||||    
T  17828433 tagttagtggagtaattaagttggatg-aattcaataaataatgatataata 17828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 44180357 - 44180268
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaa 95  Q
    |||| ||||||||||| |||| | |||||||||||   |||||||||||||| ||||||||||| ||||||||||||  |||||||||||    
T  44180357 aataatagtcgtttaaggtttatacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtataatttactaaaa 44180268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 27921102 - 27920994
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||| | ||||||| ||| ||||||||||||  ||||| |||||||   ||||||||||||||||||| |  | |||||||||||||| |||    
T  27921102 aaatgattaattatgttgattttaatggtaaaattagtatcatttattaaaacactcttattaattgtagttagtgcattagttaagttggatgaagttc 27921003  T
Q  144 aataaataa 152  Q
    ||| |||||    
T  27921002 aatcaataa 27920994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 35333160 - 35333051
Alignment:
Q  41 tagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaa 140  Q
    |||||||  |||||||| |||||||||||  || ||||| || |||||| ||||| ||  |||||||||||||||||||||  | ||||||| |||||||    
T  35333160 tagaaatagttaattgtgttgatttcaattatataattaatattatttattaaaatattattattaattgtagttagtggagtagttaagttagatgaaa 35333061  T
Q  141 ttcaataaat 150  Q
    ||||| ||||    
T  35333060 ttcaacaaat 35333051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 44424201 - 44424113
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||| |||||||||||||  |||||||||||||||| |||||||||||| ||||| |||  ||||| |||||||||||  |||||||    
T  44424201 ttattaaatgtagttagtggagtaattaagttggatgaagttcaataaataagggtattata-atgaaaaaaataataaatgctgcattg 44424113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 46211583 - 46211472
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagt---atttactaaaacatattt 102  Q
    |||| ||||||||||| |||| ||||| |||||||  ||||||||||||||| |||||||  || |||||| ||||| |   ||||||||||||||  ||    
T  46211583 aataatagtcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaactagtactatcatttactaaaacatcctt 46211484  T
Q  103 attaattgtagt 114  Q
    ||||||||||||    
T  46211483 attaattgtagt 46211472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 17610976 - 17610896
Alignment:
Q  84 tatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt 164  Q
    |||||||||||| || | ||||||||||||||| || || | |||||||||||||||||||||| | |||| |||||||||    
T  17610976 tatttactaaaatatttgtattaattgtagttattgaaatagttaagttggatgaaattcaatacacaaagatataatagt 17610896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 49101719 - 49101659
Alignment:
Q  102 tattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||||||||||||||  | |||||||| ||||||||||||||||||| ||||||||    
T  49101719 tattaattgtagttagtggagtagttaagttgaatgaaattcaataaataaaagtataata 49101659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 2850863 - 2850947
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaa 95  Q
    ||||||||||  |||| |||| ||||||||  ||||||||||||| | |||||||||||  |||||||| || ||||||||||||    
T  2850863 tagtcgtttatggtttgtgcatgattattaaggaaatgattaattatgttgatttcaatgataaaattaatattatttactaaaa 2850947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 162
Target Start/End: Original strand, 19060378 - 19060529
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||||||||||||| || |  ||| | | |||||||||||||||| ||||||| ||| ||||||||| || |||||| |     ||| |||||    
T  19060378 aataatagtcgtttaaagtttgtgtataattttgaaagaaatgattaattgtgttgatttaaattgtaaaattaatattatttatt-----atacttatt 19060472  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||||||||||| |    | || ||||||||||||||| |||||| | |||||||    
T  19060473 aattgtagttagtgaatttgtcaacttggatgaaattcaacaaataaggatataata 19060529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 179
Target Start/End: Complemental strand, 36790797 - 36790720
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataa 179  Q
    |||||||||||||||||| ||  | ||| || |||||||||||||||||||| ||||||||| | |||| |||||||||    
T  36790797 ttattaattgtagttagttgagtagttatgtcggatgaaattcaataaataagggtataataatggaaa-aaataataa 36790720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 17783098 - 17783183
Alignment:
Q  36 tattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtgga 121  Q
    ||||| ||| ||||||||| || ||||| | |||||||||||  ||  | ||||||||||||| |||||||||| |||||||||||    
T  17783098 tattaaagagatgattaatagttttgatcttaatagtaaaatatgtgttgtttactaaaacatctttattaattatagttagtgga 17783183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 30546413 - 30546485
Alignment:
Q  87 ttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtata 159  Q
    |||||||||||  ||||||||||||||||| ||||  | |||||| |  ||||||||||||||||| ||||||    
T  30546413 ttactaaaacacctttattaattgtagttattggagtagttaagtggagtgaaattcaataaataagggtata 30546485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 29835567 - 29835618
Alignment:
Q  141 ttcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||||||| ||||||||| |||  ||||||||||| ||||||||||    
T  29835567 ttcaataaataaagatataatagtggaacaaaataataaatgttgcattggt 29835618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 45724978 - 45725036
Alignment:
Q  100 tttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtat 158  Q
    |||||||||| ||||| |||||| ||| ||||||||||||||| |||| ||||| ||||    
T  45724978 tttattaattttagttggtggaataatcaagttggatgaaatttaatatataaatgtat 45725036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 215
Target Start/End: Complemental strand, 24167078 - 24166938
Alignment:
Q  71 gtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaa-a 169  Q
    ||||||||| |  |||||||||||| |   |||||||| |||||||||| |  | |||  ||| ||||||||||| |||||| || |||| |||  || |    
T  24167078 gtaaaattaatgttatttactaaaatacccttattaatagtagttagtgcagtagttacattgaatgaaattcaagaaataagggaataaaagtgaaata 24166979  T
Q  170 caaataataaatattgcattggtgttgcattgtaaagtgacaatta 215  Q
     ||||||||||||||||||||||     ||||||||||||||||||    
T  24166978 aaaataataaatattgcattggt-----attgtaaagtgacaatta 24166938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 31665731 - 31665840
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagt-atttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    |||| |||| |||| ||||||| ||| ||||||||| |  | ||||||||||| |||||||||||| ||||||||| ||  | |||| || ||| || ||    
T  31665731 aaataattagttgtgttgattttaatggtaaaattaattttcatttactaaaatatatttattaatagtagttagtagagtagttaaattagataaattt 31665830  T
Q  143 caataaataa 152  Q
    ||||||||||    
T  31665831 caataaataa 31665840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 192
Target Start/End: Complemental strand, 37490422 - 37490341
Alignment:
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||||  |||||| ||| ||||||||||||||||||  | ||| ||||  |||  |||||||||| ||||||||||    
T  37490422 tagttagtggagtaattaaattgaatgaaattcaataaataagagcatactagtaaaaaataataataaatgttgcattggt 37490341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 44424287 - 44424214
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaatta 79  Q
    |||| ||||||||||| |||  |||||| ||||||  ||||||||||||||| |||||||  || |||||||||    
T  44424287 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaatta 44424214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 47045546 - 47045611
Alignment:
Q  104 ttaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaa 169  Q
    |||||||| ||||||| |  | |||||||||||||||||||| ||||||  |||||||||| ||||    
T  47045546 ttaattgtggttagtgtagtagttaagttggatgaaattcaacaaataagagtataatagtggaaa 47045611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 5e-46; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 21216078 - 21216275
Alignment:
Q  12 agtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgt 111  Q
    |||||||||| |||| |||| ||||||||  ||||||||||||||| ||||||||||| ||||||||||| | ||||||||||||||  |||||||||||    
T  21216078 agtcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagttgcatttactaaaacatccttattaattgt 21216177  T
Q  112 agttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaat-aataaatattgcattggtgttgcattgtaaagtgac 210  Q
    ||||||||||  | |||||||||||||||||||||||  || ||||||||||| |||| |||| ||||||| ||||||||||     |||||||||||||    
T  21216178 agttagtggagtagttaagttggatgaaattcaataa--aatggtataatagtagaaaaaaataaataaatgttgcattggt-----attgtaaagtgac 21216270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 34 - 181
Target Start/End: Complemental strand, 7173031 - 7172884
Alignment:
Q  34 attattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttg 133  Q
    ||||||| |||||||||||||||| |||||||||||  |||||||||||| |||||||||||||||||||||||||||||||| || |  | ||||||||    
T  7173031 attattaaagaaatgattaattgtgttgatttcaatgataaaattagtagcatttactaaaacatatttattaattgtagttaatgaagtagttaagttg 7172932  T
Q  134 gatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
     |||||||||||||||||| ||||||||||| |||| |||||||||||    
T  7172931 aatgaaattcaataaataagggtataatagtggaaaaaaataataaat 7172884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 17719229 - 17719415
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||||||||  ||| ||||||||||||| | ||||||||||||||| |||||| ||| ||||| |||||| |||||||||||| ||  |||||    
T  17719229 aataatagtcgtttaagatttgtgcacgattattaaaaaaatgattaattgtaatgattttaatggtaaagttagtattatttactaaaatatccttatt 17719328  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||| |||||||||||  | ||||||||||||||||| ||||||||||||||||||| | |||| | ||||||||| ||||||||||    
T  17719329 aattatagttagtggagtagttaagttggatgaaatttaataaataaaggtataataatggaaaaagataataaatgttgcattggt 17719415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 11976907 - 11977082
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||| ||||||||| ||||| ||||||||| ||||||||||| ||| ||| ||||| ||||||||||| |   |||||    
T  11976907 aatattagtcgtttaaggtttgtgcatgattattatggaaatcattaattgtgttgatttcaatggtataatcagtagcatttactaaaatacccttatt 11977006  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    ||||||||||||| ||  | ||||||| ||||||||||||||||||||||||||||||  |||| |||||||||||    
T  11977007 aattgtagttagtagagtagttaagttagatgaaattcaataaataaaggtataatagcggaaaaaaataataaat 11977082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 192
Target Start/End: Original strand, 34948657 - 34948842
Alignment:
Q  5 gaatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttat 104  Q
    ||||| || ||||||||  ||| | ||| |||||||  ||||||||||||||| ||||||| ||||||||||||||||  ||||||  ||||| ||||||    
T  34948657 gaataataatcgtttaagatttgtacacaattattaaggaaatgattaattgtgttgatttaaatagtaaaattagtatcatttacagaaacacatttat 34948756  T
Q  105 taattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||||||||||  | ||||||||||||||||||||||||| ||||||||| |  ||||| ||||||||||||||||||||||    
T  34948757 taattgtagttagtggagtagttaagttggatgaaattcaataaat-aaggtataaca-atgaaaaaaataataaatattgcattggt 34948842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 39482760 - 39482548
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||||||||||  ||| |||||||||||||   |||||||||||||| ||||||||||  ||||||||||||| |||||||||||||   |||||    
T  39482760 aatattagtcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaagggtaaaattagtagaatttactaaaacacccttatt 39482661  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggt---ataatagttgaaacaaataataaatattgcattggtgttgcattgt 202  Q
    |||| |||||||||||  | |||||| | |||||||||||||||||| |||   |||||||| | || |||||||||||| |||||||||     |||||    
T  39482660 aattatagttagtggactagttaagtggaatgaaattcaataaataagggtataataatagtgggaaaaaataataaatactgcattggt-----attgt 39482566  T
Q  203 aaagtgacaattactttg 220  Q
    ||||||||||||| ||||    
T  39482565 aaagtgacaattattttg 39482548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 45425637 - 45425847
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||||||||||  ||| |||| ||||||||   |||||||||||||| ||||||| ||| ||||||||| ||  ||||| ||||||||  |||||    
T  45425637 aatattagtcgtttaagttttatgcatgattattaagaaaatgattaattgtgttgattttaatggtaaaattaataacatttattaaaacattcttatt 45425736  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttg-aaacaaataataaatattgcattggtgttgcattgtaa 204  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||| ||||||||||| | ||| ||||||||||| || ||||| |     |||||||    
T  45425737 aattgtagttagtggagtaattaagttgtatgaaattcaataaataagggtataatagtggaaaaaaaataataaatgttacattgat-----attgtaa 45425831  T
Q  205 agtgacaattactttg 220  Q
    ||||||||||| ||||    
T  45425832 agtgacaattattttg 45425847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 10179923 - 10180104
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||| |||||||||||||   |||||| || |||||||||||||||| ||||||||||||  ||||||||||| | | ||||||||||    
T  10179923 tagtcgtttaaggtttgtgcacgattattaagaaaatgagtagttgtattgatttcaatggtaaaattagtataatttactaaaatacacttattaattg 10180022  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||||||||  | |||||||| |||||||||||| |||||  |||||||| | ||||  |||||||||| ||||||||||    
T  10180023 tagttagtggagtagttaagttgaatgaaattcaattaataagtgtataataatagaaaataataataaatgttgcattggt 10180104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 39405907 - 39405723
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||||||||||||  ||||||||||||||| || ||||||||  |||||||||||  |||||||| || || ||||||    
T  39405907 aatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtatcatttactataatatctttatt 39405808  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||  ||||||||||  |||||||||| |||||||| ||||||||| |||||||||||  |||  ||||||||||  |||||||    
T  39405807 aattacagttagtggagtaattaagttgaatgaaattaaataaataagggtataatagtgaaaaataataataaatgctgcattg 39405723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 43 - 178
Target Start/End: Original strand, 44761502 - 44761637
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    ||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||   |||||||||||||||||||||  | |||||||||||||||||    
T  44761502 gaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaaatt 44761601  T
Q  143 caataaataaaggtataatagttgaaacaaataata 178  Q
    |||||||| | ||||||||||| |||| || |||||    
T  44761602 caataaatgagggtataatagtggaaaaaactaata 44761637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 31082764 - 31082608
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||| |||||  |||| |||||||| ||||  ||||||||||||||| ||||||| |||  |||||||||| |||||||||||||||   |||||    
T  31082764 aatattagttgtttatggtttgtgcacgataattaaggaaatgattaattgtcttgattttaatgataaaattagtggtatttactaaaacacccttatt 31082665  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||| |||||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  31082664 aattatagttagtggagtagttaagttggatgaaatttaataaataaaggtataata 31082608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 13335353 - 13335176
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    |||||||| |||| |||||||||||||  |||||| |||||||| |||||||  || ||||||||||||  ||||| ||||||| |||||||||||| ||    
T  13335353 tcgtttaaggtttatgcacgattattaaggaaatggttaattgtgttgattttgatggtaaaattagtatcatttagtaaaacacatttattaattgcag 13335254  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||| ||  | ||||||| ||||||||||||||||| | ||||||||| | |||| ||||||||||| ||||||||||    
T  13335253 ttagtagagtagttaagtttgatgaaattcaataaatcagggtataataatggaaa-aaataataaatgttgcattggt 13335176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 1875564 - 1875676
Alignment:
Q  7 atattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatta 106  Q
    ||||||||||||||| |||| |||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||   ||||||    
T  1875564 atattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttatta 1875663  T
Q  107 attgtagttagtg 119  Q
    |||||||||||||    
T  1875664 attgtagttagtg 1875676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 9300094 - 9300295
Alignment:
Q  16 gtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtt 115  Q
    |||||| |||| |||||||||||||   ||||||||  |||| ||||||| ||| ||||||||| ||| |||||||||||||   ||||||||| |||||    
T  9300094 gtttaaggtttatgcacgattattaagaaaatgattgtttgtgttgattttaatggtaaaattaatagcatttactaaaacacccttattaattttagtt 9300193  T
Q  116 agtggaacaattaagttggatgaaattcaataaataaaggtataatagt--tgaaacaaataataaatattgcattggtgttgcattgtaaagtgacaat 213  Q
    ||||||  | |||||||| |||||||||||||||||| | |||||||||   |||| |||||||||||| |||||||||     ||||||||||||||||    
T  9300194 agtggagtagttaagttgaatgaaattcaataaataaggatataatagtggggaaagaaataataaatactgcattggt-----attgtaaagtgacaat 9300288  T
Q  214 tactttg 220  Q
    || ||||    
T  9300289 tattttg 9300295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 27294042 - 27294183
Alignment:
Q  18 ttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttag 117  Q
    |||| |||| ||||||||| ||| |||| | ||||||||| || |||| |||  |||||||||||   |||||||||| |||||||||||||| ||||||    
T  27294042 ttaaggtttgtgcacgatttttaaagaagttattaattgtgttcatttgaatgataaaattagtatcttttactaaaatatatttattaattgcagttag 27294141  T
Q  118 tggaacaattaagttggatgaaattcaataaataaaggtata 159  Q
    ||||  |||||||||||||||||||||||||||||| |||||    
T  27294142 tggagtaattaagttggatgaaattcaataaataaatgtata 27294183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 43719211 - 43719382
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagt-atttactaaaacatatttattaatt 109  Q
    ||||||||||||| || |||| | || ||| | |||| ||||||| ||||||||| |||  |||||||||  || ||||| ||||| |   |||||||||    
T  43719211 tagtcgtttaaagattatgcatggtttttaaataaattattaattatattgattttaattataaaattaggtgtcatttattaaaataacattattaatt 43719310  T
Q  110 gtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaat 181  Q
     |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  43719311 atagttagttgaataattaagttggatgaaattcaataaataaaggtataatagttgaataaaatagtaaat 43719382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 26626088 - 26626267
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||| |||||||||||||  ||||||||||||||| |||| ||  || |||||||| |||  ||||| ||||| ||  ||||||||||    
T  26626088 tagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgaatttgatggtaaaatttgtataatttattaaaatatccttattaattg 26626187  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||||||||||  | |   |||| |||||||||||||||||| ||||||||| | | || |||||||||||  |||||||    
T  26626188 tagttagtggagtagtccggttgaatgaaattcaataaataagggtataataatgggaaaaaataataaatgctgcattg 26626267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 31271161 - 31270985
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattg 110  Q
    ||||||||||| |||| || ||||||||||   |||||||| ||||| ||||||| ||| ||||||||| ||  || |||||||| |   |||||||||     
T  31271161 tagtcgtttaaggtttgtgtacgattattaagaaaatgattgattgtgttgattttaatggtaaaattaatatcatatactaaaatactcttattaatta 31271062  T
Q  111 tagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcatt 189  Q
    |||||||||||  | ||||||||||| ||||||||||||||| |||||| || |  ||| |||||||||||||||||||    
T  31271061 tagttagtggagtagttaagttggataaaattcaataaataagggtatagtaat--aaaaaaataataaatattgcatt 31270985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 22771814 - 22771992
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    |||||||| |||| |||||  ||||||  ||| ||||||||||  |||||||  || |||||||||||   ||||| |||||||   |||||||||||||    
T  22771814 tcgtttaaggtttatgcacagttattaaggaattgattaattgggttgattttgatggtaaaattagtgtcatttattaaaacacccttattaattgtag 22771913  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||||| |  ||||| ||||||||||||||||||||||| ||||||||| |  |||  |||||||||| ||||||||||    
T  22771914 ttagtgaagtaattatgttggatgaaattcaataaataagggtataataatgaaaagtaataataaatgttgcattggt 22771992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 42887104 - 42886990
Alignment:
Q  47 tgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaat 146  Q
    ||||||||||| ||||||||||||| ||||||||||  ||||||||||| |  |||||||||||||||||||||   | ||||||||||| |||||||||    
T  42887104 tgattaattgtgttgatttcaatagcaaaattagtatcatttactaaaatacctttattaattgtagttagtggcgtagttaagttggataaaattcaat 42887005  T
Q  147 aaataaaggtataat 161  Q
    ||||||  |||||||    
T  42887004 aaataagagtataat 42886990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 31331516 - 31331419
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaa 140  Q
    |||||||||||||||||||||||||||  |||||||| || |||||||||||| ||  ||||||||||||||||||| |  |||||||||||||||||    
T  31331516 gaaatgattaattgtattgatttcaattataaaattattattatttactaaaatatcattattaattgtagttagtgaagtaattaagttggatgaaa 31331419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 10097962 - 10098110
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||  |||| | ||||||   ||||||||||||||||||||||  || ||||||||| ||  |||||||| ||||   |||||    
T  10097962 aataatagtcgtttaaggttgatgcatggttattaagaaaatgattaattgtattgattttgatggtaaaattaatatcatttactataacacccttatt 10098061  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaag 154  Q
    ||||||||||||||||  | |||||||||||||| ||||||||||||||    
T  10098062 aattgtagttagtggagtagttaagttggatgaagttcaataaataaag 10098110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 51257 - 51132
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||| |||||| |||| |||||||||||||   |||||||||||||| ||||||| ||| ||||||| ||||  |||||| |||||| |||||||    
T  51257 aataatagttgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgattttaat-gtaaaataagtatcatttacaaaaacacatttatt 51159  T
Q  106 aattgtagttagtggaacaattaagtt 132  Q
    ||||||||||||||||  |||||||||    
T  51158 aattgtagttagtggattaattaagtt 51132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 40996344 - 40996482
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    |||||||| |||| ||||| ||| |||  ||||||||||||||| |||||||  |  |||||||||||   |||||||||||||   |||||||||||||    
T  40996344 tcgtttaaggtttatgcacaattgttaaggaaatgattaattgtgttgattttgaatgtaaaattagtttcatttactaaaacacccttattaattgtag 40996443  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    |||||| ||   |||||||||||||||||||||||||||    
T  40996444 ttagtgaaatggttaagttggatgaaattcaataaataa 40996482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 4428360 - 4428485
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    ||||||||| |||| ||||||| |||  |||||||| ||  ||||||||||| | | ||||||||||||||||||| |  | ||||||| ||||||||||    
T  4428360 aaatgattatttgtgttgattttaatgataaaattattatcatttactaaaatacaattattaattgtagttagtgaattagttaagttagatgaaattc 4428459  T
Q  144 aataaataaaggtataatagttgaaa 169  Q
    |||||||||| |||||||||| ||||    
T  4428460 aataaataaaagtataatagtggaaa 4428485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 152
Target Start/End: Original strand, 34393925 - 34394075
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||||||||||||  |||||| ||||||  ||||||||||||||| |||||||  || ||||||||||||  |||||||||||||  ||||||    
T  34393925 aataatagtcgtttaaagttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtataatttactaaaacacctttatt 34394024  T
Q  106 aattgtagtta----gtggaacaattaagttggatgaaattcaataaataa 152  Q
    |||| ||||||    |||||  | ||||||||||| || ||||||||||||    
T  34394025 aattatagttaactagtggagtagttaagttggataaagttcaataaataa 34394075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 14854943 - 14855090
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||| | ||||| ||||||| ||| ||||||||| | | |||| ||||||||  ||||||||||||||||||||||  | ||| | || |||||||||    
T  14854943 aaatgaatcattgtgttgattttaatggtaaaattaattgcatttgctaaaacacctttattaattgtagttagtggagtagttaggctgaatgaaattc 14855042  T
Q  144 aataaataaaggtataatagttg--aaacaaataataaatattgcatt 189  Q
    |||||| || ||||||||||| |  ||| |||||||||||||||||||    
T  14855043 aataaagaatggtataatagtggaaaaaaaaataataaatattgcatt 14855090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 31231853 - 31231689
Alignment:
Q  28 tgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaatt 127  Q
    |||||| ||||||  |||||||| |||||| | |||||  || ||||||||| ||  ||||||| |||||   |||||||||||||||||||||  | ||    
T  31231853 tgcacggttattaaggaaatgatgaattgtgtcgattttgatggtaaaattaatatcatttactgaaacacccttattaattgtagttagtggagtagtt 31231754  T
Q  128 aagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    ||||||||| || |||||||||||| ||||| ||| | |||| |||||||||||  |||||||||    
T  31231753 aagttggataaagttcaataaataagggtattataatggaaaaaaataataaatgatgcattggt 31231689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 148
Target Start/End: Original strand, 34057627 - 34057731
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||| ||||||| | |||||||||||| ||||| ||||| |||||||||||| ||  || ||| |||||||||||| || | ||||||||||||||||||    
T  34057627 aaataattaattatgttgatttcaataataaaactagtattatttactaaaatatcgttgttatttgtagttagtgaaatagttaagttggatgaaattc 34057726  T
Q  144 aataa 148  Q
    |||||    
T  34057727 aataa 34057731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 5053161 - 5053280
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    ||||||||||||||| |||||||  || ||||||||| ||  |||||||||||||   ||||||||||||||||| |||  | |||| |||||||| |||    
T  5053161 gaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacagtcttattaattgtagttagcggagtagttaaattggatgagatt 5053260  T
Q  143 caataaataaaggtataata 162  Q
    ||||||||||  ||||||||    
T  5053261 caataaataagagtataata 5053280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 192
Target Start/End: Original strand, 396619 - 396768
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    ||||||||||||| | ||||||||||  ||||||||||||  |||||||| || ||  |||||||||||||||| || |  | |||  |||||| |||||    
T  396619 gaaatgattaattatgttgatttcaacggtaaaattagtatcatttactacaatatccttattaattgtagttaatgaagtagttatattggataaaatt 396718  T
Q  143 caataaataaaggtataatagttgaaacaaataataaatattgcattggt 192  Q
    |||| ||||| ||||||||| |  |||  |||||||||| ||||||||||    
T  396719 caattaataagggtataataatgaaaaataataataaatgttgcattggt 396768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 17824022 - 17823883
Alignment:
Q  50 ttaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaa 149  Q
    ||||| || |||||||||||  |||||||||||   ||||||| || |  |||||||||||||||||||| |  | ||||||||||||||||| ||||||    
T  17824022 ttaatcgtgttgatttcaatgataaaattagtatcttttactagaatacctttattaattgtagttagtgaagtagttaagttggatgaaattaaataaa 17823923  T
Q  150 taaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    |||  ||||||||| || |  ||||||||||||||| ||||    
T  17823922 taatagtataatag-tggaggaaataataaatattgtattg 17823883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 32476426 - 32476278
Alignment:
Q  12 agtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgt 111  Q
    |||||||||| |||| |||||| ||||||   |||||||| ||| | |||||||||||  |||||||| ||  ||||| ||||| |   |||||||||||    
T  32476426 agtcgtttaaggtttgtgcacggttattaagaaaatgattgattctgttgatttcaatgataaaattaatatcatttattaaaatacccttattaattgt 32476327  T
Q  112 agttagtggaacaattaagttggatgaaattcaataaataaaggtataa 160  Q
    ||||| || |  | ||||||| ||||||||||||||||||| |||||||    
T  32476326 agttaatgaagtagttaagtttgatgaaattcaataaataagggtataa 32476278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 40028623 - 40028482
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgta----gttagtggaacaattaagttggatgaa 139  Q
    |||||||||||| | ||||||||||| ||||||||| ||| ||||| ||||| ||  ||||||||||||    ||||||| |  ||||||||| ||||||    
T  40028623 aaatgattaattatgttgatttcaatggtaaaattaatagcatttattaaaatatcattattaattgtatttagttagtgaagtaattaagttagatgaa 40028524  T
Q  140 attcaataaataaaggtataatagttgaaacaaataataaat 181  Q
    |||||||||| ||   ||||||| | |||| |||||||||||    
T  40028523 attcaataaacaagaatataatactggaaaaaaataataaat 40028482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 40109857 - 40109789
Alignment:
Q  28 tgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaac 96  Q
    |||||| || ||| ||||||||||||||| |||||||||||||||||||||||||  ||||||||||||    
T  40109857 tgcacggtttttaaagaaatgattaattgaattgatttcaatagtaaaattagtataatttactaaaac 40109789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 42972490 - 42972625
Alignment:
Q  17 tttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtta 116  Q
    ||||| |||| |||||||||||||   |||||||||||||| ||||||||||| ||||||||| ||   |||||||||| |   ||||||||| ||||||    
T  42972490 tttaaggtttgtgcacgattattaagaaaatgattaattgttttgatttcaatggtaaaattaatatcgtttactaaaatacccttattaattatagtta 42972589  T
Q  117 gtgga-ac--aattaagttggatgaaattcaataaa 149  Q
    ||||| ||  | |||||||| |||||||||||||||    
T  42972590 gtggagacgtagttaagttgaatgaaattcaataaa 42972625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 4924094 - 4924225
Alignment:
Q  62 atttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataat 161  Q
    |||| ||| |||||||||||| |||||||||||| || ||||||||||||||||| | ||  | |||||||| |||||| | ||||||||| |||||| |    
T  4924094 attttaatggtaaaattagtattatttactaaaatatctttattaattgtagttaatagagtagttaagttgaatgaaacttaataaataagggtatatt 4924193  T
Q  162 agttgaaaca-aataataaatattgcattggt 192  Q
    |||  ||| | ||||||||||| || ||||||    
T  4924194 agtgaaaaaataataataaataatgtattggt 4924225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 32678469 - 32678402
Alignment:
Q  85 atttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    ||||||||||||||  |||||||||||||||||||||  | ||||||||||||||||| |||||||||    
T  32678469 atttactaaaacatccttattaattgtagttagtggagtagttaagttggatgaaattaaataaataa 32678402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 36967506 - 36967415
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaaca 97  Q
    |||| ||||||||||| |||| |||||||||||||  ||||||||||||||| |||||||  || ||||||||| ||  |||||||||||||    
T  36967506 aataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaaca 36967415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 5356707 - 5356602
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    |||||||||| |||| ||||||| |||  |||||||| ||  |||||||||   |  ||||||||||||||||| ||||| |||||||||||||||||||    
T  5356707 gaaatgattagttgtgttgattttaatgataaaattaatatcatttactaatgtac-tttattaattgtagttaatggaataattaagttggatgaaatt 5356609  T
Q  143 caataaa 149  Q
    |||||||    
T  5356608 caataaa 5356602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 184
Target Start/End: Original strand, 35504843 - 35505019
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||||||||| | | || |||| | ||| ||||||||||||||||||| |||| |||  |||||||  |   ||| | ||||| || ||||||    
T  35504843 aataatagtcgtttaaaatgtatggacgacttttaaagaaatgattaattgtattaattttaatgttaaaatttatttcatt-attaaaatatttttatt 35504941  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatatt 184  Q
    ||||||||||| | ||| | |||| || ||| |||||||||||||||  ||||||||| ||||| ||||||||||||||    
T  35504942 aattgtagttaatagaatagttaaattcgataaaattcaataaataagagtataatag-tgaaaaaaataataaatatt 35505019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 41092114 - 41091982
Alignment:
Q  31 acgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaag 130  Q
    |||||| ||| ||||| |||||||||| ||||||||||| ||||||||| ||  ||||| ||||| |   |||||||||||||||||   || | |||||    
T  41092114 acgatttttaaagaaacgattaattgtgttgatttcaatggtaaaattaatatcatttattaaaatactcttattaattgtagttagaaaaatatttaag 41092015  T
Q  131 ttggatgaaattcaataaataaaggtataatagt 164  Q
    ||  ||| |||||||||||||| |||||||||||    
T  41092014 tt-tatgtaattcaataaataagggtataatagt 41091982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 1739785 - 1739709
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagta 82  Q
    |||||||||||| ||| |||| || ||||||||||  ||||| ||||||||| ||||||||||| ||||||||||||    
T  1739785 aatattagtcgtctaaggtttgtgtacgattattaaggaaataattaattgtgttgatttcaatggtaaaattagta 1739709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 7703132 - 7703216
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaa 95  Q
    |||||||||||||||| || | ||||||||  ||||| ||||||||| ||||||||||| ||||||||| ||  |||||||||||    
T  7703132 tagtcgtttaaagtttgtgtaagattattaaggaaataattaattgtgttgatttcaatggtaaaattaatatcatttactaaaa 7703216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 36006901 - 36007004
Alignment:
Q  49 attaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataa 148  Q
    |||| |||| ||||||| |||  |||||||| || |||| ||||||| ||   |||||||||||||||||||   ||||||||| |||||||||||||||    
T  36006901 attagttgtgttgattttaatgataaaattaatattattgactaaaatatccctattaattgtagttagtggggtaattaagtttgatgaaattcaataa 36007000  T
Q  149 ataa 152  Q
    ||||    
T  36007001 ataa 36007004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 29226577 - 29226655
Alignment:
Q  84 tatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    |||||| |||||||   |||||||||||||||||||||  | ||||||| ||||||||||||||||||| |||| ||||    
T  29226577 tatttattaaaacactcttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtacaata 29226655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 44648556 - 44648618
Alignment:
Q  59 ttgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtgga 121  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||| |||||||| ||||||||    
T  44648556 ttgatttcaatggtaaaattagtatcatttactaaaacatacttactaattgtaattagtgga 44648618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 2767284 - 2767377
Alignment:
Q  28 tgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtgga 121  Q
    |||||| ||||||  ||||| ||||||||| |||||||  || ||||||||||||  ||||| ||||||||  |||||| ||||||||||||||    
T  2767284 tgcacggttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttattaaaacatccttattatttgtagttagtgga 2767377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 39300912 - 39301001
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaa 95  Q
    |||| |||||||||||  ||| || |||||||||| |||||||||||||| | |||||||| || ||||||||| ||  |||||||||||    
T  39300912 aatagtagtcgtttaagatttgtgtacgattattaaagaaatgattaattatgttgatttcgatggtaaaattaatatcatttactaaaa 39301001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 39890740 - 39890663
Alignment:
Q  32 cgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaatt 109  Q
    ||||| ||| ||||||||||| |||  |||| ||||||| |||||||||||| ||||||||||||||  |||||||||    
T  39890740 cgatttttaaagaaatgattagttgagttgacttcaataataaaattagtagcatttactaaaacattcttattaatt 39890663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 6611842 - 6611762
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtat 86  Q
    ||||||||||||||||  |||   ||||||||||| | |||||||||||| | ||||||||||| ||||||||||| ||||    
T  6611842 aatattagtcgtttaagatttacacacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagtggtat 6611762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 32678863 - 32678787
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagta 82  Q
    |||| |||||||||||||||| | |||||||||||  ||||||||||||||| |||||||  || |||||| |||||    
T  32678863 aataatagtcgtttaaagtttatacacgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta 32678787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 12559702 - 12559635
Alignment:
Q  42 agaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaatt 109  Q
    |||||||||||||||| ||||||| |||| |||||||| ||  ||||||||||| || ||||||||||    
T  12559702 agaaatgattaattgtgttgattttaataataaaattaataccatttactaaaatatttttattaatt 12559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 33765794 - 33765663
Alignment:
Q  17 tttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtta 116  Q
    ||||| |||| ||||| ||| |||  ||||||||||||| | ||||||| |||| |||||||| ||  ||||||||| | |  ||||||||||||||||     
T  33765794 tttaaggtttgtgcacaatttttaaggaaatgattaattatgttgattttaatactaaaattactatcatttactaatatacttttattaattgtagttg 33765695  T
Q  117 gtggaacaattaagttggatgaaattcaataa 148  Q
    ||| | ||  ||| |||| |||||||||||||    
T  33765694 gtgaatcagataaattgggtgaaattcaataa 33765663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 39301022 - 39301101
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaa 180  Q
    ||||||||||||||||||| |  | || ||||| ||||||||||||||||||| |||||||| | ||||  |||||||||    
T  39301022 ttattaattgtagttagtgaagtagttcagttgaatgaaattcaataaataaaagtataataatggaaaataataataaa 39301101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 184
Target Start/End: Original strand, 5878997 - 5879139
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaatta-agttggatgaaat 141  Q
    ||||||||||||  | ||||||| ||| |||||||  |||  ||| ||||||||| ||||||||||| | |||||||||| ||||| || ||  ||||||    
T  5878997 gaaatgattaatattgttgattttaatggtaaaatatgtatcattcactaaaacacatttattaattatggttagtggaataattatagatgattgaaat 5879096  T
Q  142 tcaataaataaaggtataatagttgaaacaaataataaatatt 184  Q
     ||||||||||  ||||  |||| |||| || |||||||||||    
T  5879097 gcaataaataagagtattttagtcgaaaaaagtaataaatatt 5879139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 32631464 - 32631376
Alignment:
Q  101 ttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||||||| |||||||||  ||||||||||  ||||||| ||| |||||  || ||||||| |||| |||||||| |||||||||||    
T  32631464 ttattaattgttgttagtggagtaattaagttgtgtgaaatttaatgaataagtgtgtaatagtagaaa-aaataatagatattgcattg 32631376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 1875839 - 1875914
Alignment:
Q  135 atgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaagtgacaatta 215  Q
    |||||||| ||||||||| |||||| |||| |||| || |||||||| ||||||||||     ||||||||||||||||||    
T  1875839 atgaaatttaataaataagggtatactagtggaaaaaagtaataaatgttgcattggt-----attgtaaagtgacaatta 1875914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 9839797 - 9839909
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||| |||| |  || ||| |||  ||||||||||| ||| ||||||||||   ||||||||||| |||||| ||||| | ||| |||    
T  9839797 aataatagtcgtttaatgtttatatacaatttttaaggaaatgattaaatgttttgatttcaacgataaaattagtattatttattaaaatacattcatt 9839896  T
Q  106 aattgtagttagt 118  Q
    |||| ||||||||    
T  9839897 aattatagttagt 9839909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 50349 - 50165
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||||||||||||  ||||||||||||||| || ||||||||  |||||||||||  |||||||| || || ||||||    
T  50349 aatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtatcatttactataatatctttatt 50250  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||  ||||||||||  |||||||||| |||||||| ||||||||| |||||||||||  |||  ||||||||||  |||||||    
T  50249 aattacagttagtggagtaattaagttgaatgaaattaaataaataagggtataatagtgaaaaataataataaatgctgcattg 50165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 169
Target Start/End: Original strand, 136007 - 136170
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||||||||||  ||| ||||||||||||| | |||||||||||  | ||||||||||| ||||||||| ||| |||||||||||||   |||||    
T  136007 aatattagtcgtttaagatttatgcacgattattaaataaatgattaataatgttgatttcaatggtaaaattaatagcatttactaaaacacccttatt 136106  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaa 169  Q
    |||| ||||||||| |  | ||||||| ||||||||| ||||||||| ||||||||||| ||||    
T  136107 aattatagttagtgaagtagttaagtttgatgaaattaaataaataatggtataatagtagaaa 136170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 697 - 862
Alignment:
Q  49 attaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataa 148  Q
    ||||||||| ||||||||||| ||||||||| ||| |||||||||||||  |||||| |||||||||||||||    |||| ||||||||||||||||||    
T  697 attaattgtgttgatttcaatggtaaaattaatagcatttactaaaacacctttattgattgtagttagtggagtgtttaaattggatgaaattcaataa 796  T
Q  149 ataaaggtataatagttgaaacaaataataaatattgcattggtgttgcattgtaaagtgacaattactttg 220  Q
    |||| ||||||||||| |||| ||||| | ||| ||||| ||||     |||||||||||||||||| ||||    
T  797 ataagggtataatagtggaaa-aaatattcaatgttgcaatggt-----attgtaaagtgacaattattttg 862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 17180 - 17017
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||||||||||||||| |||| |||| ||||||||   |||||||||||||| ||||||||||| ||||||||||||| ||||| || ||||   |||||    
T  17180 aatattagtcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttattagaacacccttatt 17081  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaa 169  Q
    |||| |||||| |||   ||||| |||| |||||||||||||||||||  ||||||||| ||||    
T  17080 aattatagttaatggcgtaattacgttgaatgaaattcaataaataaaattataatagtggaaa 17017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 2164 - 2014
Alignment:
Q  12 agtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgt 111  Q
    |||||||||| |||  |||||||||||||  ||| ||||||||||| || ||||||||  |||||||| ||  ||||||||||||||  |||||||||||    
T  2164 agtcgtttaaggttcatgcacgattattaaggaagtgattaattgtgttaatttcaatgataaaattaatatcatttactaaaacatccttattaattgt 2065  T
Q  112 agttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||||  |||||  || ||||||||||||||||||| |||||||||    
T  2064 agttagtggattaattacattcgatgaaattcaataaataagggtataata 2014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 16243 - 16097
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    ||||||||| ||||||  ||| | |||||||||||  ||||||||||||||| ||||||| |||  |||||||| ||| ||||||||||||| | |||||    
T  16243 aatattagtagtttaagatttgttcacgattattaaggaaatgattaattgtgttgattttaatgataaaattaatagcatttactaaaacacacttatt 16144  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataa 152  Q
    ||||||||||| || | || ||||| |||||||||||||||||||||    
T  16143 aattgtagttaatgaagcagttaagatggatgaaattcaataaataa 16097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 192
Target Start/End: Original strand, 7951 - 8138
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| ||||||||||  |||  |||||| ||||||  ||||||||||||| | |||||||  || ||||||||| || ||||||| ||||||   |||||    
T  7951 aataatagtcgtttacggttgatgcacggttattaaggaaatgattaattttgttgatttggatggtaaaattaatattatttaccaaaacacccttatt 8050  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagt-tgaaacaaataataaatattgcattggt 192  Q
    ||||||||||||||||  |||||||||||||||| |||||||||||| ||||| ||| |  |||| |||||||||||  |||||||||    
T  8051 aattgtagttagtggagtaattaagttggatgaagttcaataaataagggtattataatgggaaaaaaataataaatgctgcattggt 8138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 5527 - 5382
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtag 113  Q
    |||||||| |||| | || ||||||||   |||||||||| ||| |||| |||||| ||||||||| ||  ||||||||||| ||  ||||||||| |||    
T  5527 tcgtttaaggtttgtacatgattattaagaaaatgattaactgtgttgaattcaatggtaaaattaatatcatttactaaaatatccttattaattttag 5428  T
Q  114 ttagtggaacaattaagttggatgaaattcaataaataaaggtata 159  Q
    ||||||||  | ||||||||||||||||||||||||||||||||||    
T  5427 ttagtggagtagttaagttggatgaaattcaataaataaaggtata 5382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 105820 - 105673
Alignment:
Q  15 cgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagt 114  Q
    |||||||  ||| |||| ||||||||   |||||||||||||| || |||||||| ||||||||| |||  ||||||||||||   ||||||||||||||    
T  105820 cgtttaagatttatgcatgattattaagtaaatgattaattgtgtttatttcaatggtaaaattaatagcgtttactaaaacacccttattaattgtagt 105721  T
Q  115 tagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||| |  | |||||||| ||||||||| |||||||| |||||||||    
T  105720 tagtgaagtagttaagttgaatgaaattcgataaataagggtataata 105673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 1849 - 1693
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttatt 105  Q
    |||| |||||||||||  ||| | |||| ||||||   |||||||||||| | |||||||  || ||||||||||||  ||||||| |||||    ||||    
T  1849 aataatagtcgtttaagatttatacacggttattaagaaaatgattaattatgttgattttgatggtaaaattagtatcatttacttaaacacccgtatt 1750  T
Q  106 aattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataata 162  Q
    ||||||||| ||||||  | ||||||||||| ||||||||||||||| |||||||||    
T  1749 aattgtagtcagtggagtagttaagttggattaaattcaataaataagggtataata 1693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 20361 - 20479
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||||||| |||||||  || ||||||||||||  ||||| ||||| |   |||||||||| |||||||| |  | ||||||||||||||||||    
T  20361 aaatgattaattgtgttgattttgattgtaaaattagtatcatttagtaaaatacccttattaattgcagttagtgaagtagttaagttggatgaaattc 20460  T
Q  144 aataaataaaggtataata 162  Q
    ||||||| | |||||||||    
T  20461 aataaatgagggtataata 20479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 112
Target Start/End: Complemental strand, 39225 - 39127
Alignment:
Q  14 tcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgta 112  Q
    |||||||| |||||||||| |||||||  ||||||||||||||| |||||||  ||  | |||||||||  ||||||||||||||  ||||||||||||    
T  39225 tcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagtatcatttactaaaacatcattattaattgta 39127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 252854 - 252959
Alignment:
Q  85 atttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatatt 184  Q
    ||||||||||| ||  |||||||||||||| | ||||  | |||||||| ||||||||||||||||||  ||||||||  ||||| ||||||||||| ||    
T  252854 atttactaaaatatcgttattaattgtagt-attggagtagttaagttgaatgaaattcaataaataagagtataata-atgaaaaaaataataaatgtt 252951  T
Q  185 gcattggt 192  Q
    ||||||||    
T  252952 gcattggt 252959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 252504 - 252575
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagta 82  Q
    ||||||||||| ||||  | | |||||||| |||||||||||||| | ||||||| ||| ||||||||||||    
T  252504 tagtcgtttaaggtttgcgtatgattattaaagaaatgattaattatgttgattttaatggtaaaattagta 252575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 76317 - 76253
Alignment:
Q  126 ttaagttggatgaaattcaataaataaaggtataatagttgaaacaaataataaatattgcattg 190  Q
    ||||||| ||||||||||||||||||| |||||||||||  ||| |||||||||||| |||||||    
T  76317 ttaagttagatgaaattcaataaataagggtataatagtcaaaaaaaataataaatactgcattg 76253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 1798 - 1897
Alignment:
Q  17 tttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagtta 116  Q
    |||||||||| |||||||||||||   |||| ||||||||| |||||||  ||||| |||||| ||  |||||||||||||  |||||||||| ||||||    
T  1798 tttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaattaatatcatttactaaaacacctttattaattatagtta 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 148
Target Start/End: Complemental strand, 6845 - 6741
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    ||||||||||||||| || ||||||||  ||||||||||| ||||||||||||  | |||||||||| |||||| | ||| | ||||||  |||||||||    
T  6845 gaaatgattaattgttttaatttcaatgataaaattagtattatttactaaaatgtctttattaatt-tagttactagaatagttaagtatgatgaaatt 6747  T
Q  143 caataa 148  Q
     |||||    
T  6746 taataa 6741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 56708 - 56659
Alignment:
Q  104 ttaattgtagttagtggaacaattaagttggatgaaattcaataaataaa 153  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| ||||    
T  56708 ttaattgtagttagtggaataattaagttggaagaaattcaataactaaa 56659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 14178 - 14296
Alignment:
Q  44 aaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaattc 143  Q
    |||||||||| ||| ||||||| ||| ||||||||||||  |||||   ||   | |||||||||| |||||| ||||  | |||| || ||||||||||    
T  14178 aaatgattaaatgtgttgattttaatcgtaaaattagtatcatttat--aattttttttattaattatagttaatggagtagttaaatttgatgaaattc 14275  T
Q  144 aataaataaaggtataatagt 164  Q
    |||||||||||||||||||||    
T  14276 aataaataaaggtataatagt 14296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 1130 - 1050
Alignment:
Q  6 aatattagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagtagtat 86  Q
    ||||||||||||||||  |||   ||||||||||| | |||||||||||| | ||||||||||| ||||||||||| ||||    
T  1130 aatattagtcgtttaagatttacacacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagtggtat 1050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 159
Target Start/End: Complemental strand, 42985 - 42869
Alignment:
Q  43 gaaatgattaattgtattgatttcaatagtaaaattagtagtatttactaaaacatatttattaattgtagttagtggaacaattaagttggatgaaatt 142  Q
    ||||||||||  || ||| |||||||||||||||||| ||   ||| |||||||||  ||||||||| || |||||| || ||||||||    |||||||    
T  42985 gaaatgattagatgaattaatttcaatagtaaaattaatatattttgctaaaacattcttattaattataattagtgaaataattaagtgaagtgaaatt 42886  T
Q  143 caataaataaaggtata 159  Q
    ||||||||||| |||||    
T  42885 caataaataaatgtata 42869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 6260 - 6331
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaaaattagta 82  Q
    |||||||||||||||| ||||||||| |||  ||||||||||||||| ||||||  |||  |||||||||||    
T  6260 tagtcgtttaaagtttgtgcacgatttttaacgaaatgattaattgtgttgattctaatgataaaattagta 6331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 3687 - 3750
Alignment:
Q  11 tagtcgtttaaagtttttgcacgattattatagaaatgattaattgtattgatttcaatagtaa 74  Q
    |||| ||||||||||| | ||||| ||||| | |||||||| ||||||||||||||||| ||||    
T  3687 tagttgtttaaagtttgtacacgactattaaaaaaatgattgattgtattgatttcaatggtaa 3750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University