View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18346_high_12 (Length: 260)

Name: NF18346_high_12
Description: NF18346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18346_high_12
NF18346_high_12
[»] chr7 (40 HSPs)
chr7 (13-190)||(7204866-7205043)
chr7 (190-243)||(21223514-21223567)
chr7 (190-243)||(45073482-45073535)
chr7 (190-243)||(46304222-46304275)
chr7 (190-243)||(48358917-48358970)
chr7 (190-243)||(488820-488873)
chr7 (190-243)||(1007069-1007122)
chr7 (190-243)||(5308527-5308580)
chr7 (190-243)||(6108537-6108590)
chr7 (190-243)||(7432059-7432112)
chr7 (190-243)||(14738706-14738759)
chr7 (190-243)||(18311687-18311740)
chr7 (190-243)||(39719461-39719514)
chr7 (190-243)||(44344631-44344684)
chr7 (190-243)||(44403092-44403145)
chr7 (190-243)||(45021603-45021656)
chr7 (190-238)||(35015059-35015107)
chr7 (190-237)||(12894242-12894289)
chr7 (190-243)||(1559546-1559599)
chr7 (190-243)||(19783922-19783975)
chr7 (190-243)||(25547331-25547384)
chr7 (190-243)||(28911685-28911738)
chr7 (190-243)||(30709431-30709484)
chr7 (190-243)||(31732291-31732344)
chr7 (190-243)||(44508826-44508879)
chr7 (190-238)||(18022478-18022526)
chr7 (190-238)||(22871173-22871221)
chr7 (190-243)||(17999564-17999617)
chr7 (190-243)||(19561255-19561308)
chr7 (190-243)||(21554593-21554646)
chr7 (190-243)||(30352668-30352721)
chr7 (190-243)||(31310519-31310572)
chr7 (190-235)||(35210352-35210397)
chr7 (190-243)||(37372745-37372798)
chr7 (193-238)||(39833016-39833061)
chr7 (201-243)||(10358110-10358152)
chr7 (201-243)||(19757857-19757899)
chr7 (201-243)||(23816886-23816928)
chr7 (201-242)||(6846970-6847011)
chr7 (201-238)||(35665988-35666025)
[»] chr1 (46 HSPs)
chr1 (190-243)||(32626733-32626786)
chr1 (190-243)||(24649457-24649510)
chr1 (190-243)||(48955905-48955958)
chr1 (190-243)||(990194-990247)
chr1 (190-243)||(2733291-2733344)
chr1 (190-243)||(12361118-12361171)
chr1 (190-243)||(18302223-18302276)
chr1 (190-243)||(18473379-18473432)
chr1 (190-243)||(29688272-29688325)
chr1 (190-243)||(41358503-41358556)
chr1 (190-243)||(45290564-45290617)
chr1 (190-237)||(26062070-26062117)
chr1 (190-237)||(32728889-32728936)
chr1 (193-243)||(7001739-7001789)
chr1 (193-239)||(10552156-10552202)
chr1 (190-243)||(3679731-3679784)
chr1 (190-243)||(4323936-4323989)
chr1 (190-243)||(14007594-14007647)
chr1 (190-243)||(15335134-15335187)
chr1 (201-242)||(18927886-18927927)
chr1 (190-243)||(31258447-31258500)
chr1 (190-237)||(13260099-13260146)
chr1 (190-237)||(17984536-17984583)
chr1 (190-237)||(19622769-19622816)
chr1 (190-233)||(44641275-44641318)
chr1 (201-243)||(11822110-11822152)
chr1 (193-243)||(41881201-41881251)
chr1 (201-243)||(48609446-48609488)
chr1 (201-242)||(19198799-19198840)
chr1 (190-243)||(32454130-32454183)
chr1 (190-243)||(35005492-35005545)
chr1 (190-243)||(35307950-35308003)
chr1 (193-237)||(34383059-34383103)
chr1 (190-233)||(21391218-21391261)
chr1 (201-243)||(13770596-13770638)
chr1 (201-243)||(18899986-18900028)
chr1 (201-243)||(22919789-22919831)
chr1 (201-243)||(26191465-26191507)
chr1 (201-243)||(33067582-33067624)
chr1 (201-243)||(33379994-33380036)
chr1 (190-243)||(1159680-1159733)
chr1 (201-238)||(4789421-4789458)
chr1 (201-242)||(18079508-18079549)
chr1 (190-235)||(21383217-21383262)
chr1 (190-226)||(7818942-7818978)
chr1 (201-237)||(34808307-34808343)
[»] chr2 (39 HSPs)
chr2 (189-243)||(10665090-10665144)
chr2 (190-243)||(7814446-7814499)
chr2 (190-243)||(7814579-7814632)
chr2 (190-243)||(8046436-8046489)
chr2 (190-243)||(19183890-19183943)
chr2 (190-243)||(23989943-23989996)
chr2 (190-243)||(26814068-26814121)
chr2 (190-243)||(38980093-38980146)
chr2 (190-238)||(16900007-16900055)
chr2 (190-238)||(16993398-16993446)
chr2 (190-237)||(5790738-5790785)
chr2 (190-237)||(37271942-37271989)
chr2 (193-243)||(40302083-40302133)
chr2 (190-243)||(3838103-3838156)
chr2 (190-243)||(17541616-17541669)
chr2 (190-243)||(24483505-24483558)
chr2 (190-243)||(24483638-24483691)
chr2 (190-243)||(38731934-38731987)
chr2 (190-243)||(41791125-41791178)
chr2 (190-243)||(43710486-43710539)
chr2 (190-235)||(1497784-1497829)
chr2 (194-243)||(12835433-12835482)
chr2 (190-243)||(14392970-14393023)
chr2 (201-238)||(20939175-20939212)
chr2 (190-243)||(26238918-26238971)
chr2 (190-243)||(41693842-41693895)
chr2 (190-243)||(43789031-43789084)
chr2 (190-243)||(44985728-44985781)
chr2 (190-238)||(20658171-20658219)
chr2 (190-238)||(33732971-33733019)
chr2 (190-237)||(40786573-40786620)
chr2 (193-235)||(22881813-22881855)
chr2 (190-232)||(26707989-26708031)
chr2 (201-243)||(31326102-31326144)
chr2 (201-243)||(43592152-43592194)
chr2 (201-243)||(44993910-44993952)
chr2 (195-243)||(11713689-11713737)
chr2 (201-237)||(25750816-25750852)
chr2 (202-238)||(32691424-32691460)
[»] chr5 (45 HSPs)
chr5 (190-243)||(35167005-35167058)
chr5 (190-243)||(2217697-2217750)
chr5 (190-243)||(6118334-6118387)
chr5 (190-243)||(15635483-15635536)
chr5 (190-243)||(18633800-18633853)
chr5 (190-243)||(31037503-31037556)
chr5 (190-243)||(35165999-35166052)
chr5 (190-243)||(37090581-37090634)
chr5 (190-243)||(38496527-38496580)
chr5 (191-243)||(5950280-5950332)
chr5 (190-237)||(16616475-16616522)
chr5 (190-243)||(294032-294085)
chr5 (190-243)||(5614369-5614422)
chr5 (190-243)||(16038579-16038632)
chr5 (190-243)||(18046191-18046244)
chr5 (190-243)||(25779001-25779054)
chr5 (190-243)||(27850216-27850269)
chr5 (190-243)||(29151624-29151677)
chr5 (190-243)||(29172631-29172684)
chr5 (190-243)||(29692932-29692985)
chr5 (190-243)||(36577827-36577880)
chr5 (190-243)||(38962933-38962986)
chr5 (190-243)||(42207348-42207401)
chr5 (190-237)||(21050687-21050734)
chr5 (190-243)||(23382149-23382202)
chr5 (190-235)||(28550941-28550986)
chr5 (190-235)||(29875515-29875560)
chr5 (190-243)||(30888268-30888321)
chr5 (190-243)||(38786265-38786318)
chr5 (203-243)||(18286535-18286575)
chr5 (190-244)||(25561813-25561868)
chr5 (190-237)||(33335864-33335911)
chr5 (201-243)||(3850675-3850717)
chr5 (190-232)||(7075801-7075843)
chr5 (201-243)||(26071398-26071440)
chr5 (206-243)||(4203560-4203597)
chr5 (201-238)||(9588462-9588499)
chr5 (201-238)||(17070648-17070685)
chr5 (201-238)||(20690844-20690881)
chr5 (190-243)||(21125113-21125166)
chr5 (201-238)||(29366800-29366837)
chr5 (201-237)||(3850478-3850514)
chr5 (193-233)||(10409048-10409088)
chr5 (190-238)||(10830642-10830690)
chr5 (201-233)||(32888798-32888830)
[»] chr3 (53 HSPs)
chr3 (190-243)||(3151951-3152004)
chr3 (190-243)||(8510322-8510375)
chr3 (190-243)||(12673845-12673898)
chr3 (190-243)||(13584111-13584164)
chr3 (190-243)||(16123248-16123301)
chr3 (190-243)||(19656743-19656796)
chr3 (190-243)||(22156037-22156090)
chr3 (190-243)||(28427448-28427501)
chr3 (190-243)||(37506974-37507027)
chr3 (190-238)||(4950207-4950255)
chr3 (190-243)||(275549-275602)
chr3 (190-243)||(5345529-5345582)
chr3 (190-243)||(7518287-7518340)
chr3 (190-243)||(10977085-10977138)
chr3 (190-243)||(20757506-20757559)
chr3 (190-243)||(20907297-20907350)
chr3 (190-243)||(21159656-21159709)
chr3 (201-238)||(36673076-36673113)
chr3 (190-243)||(39072053-39072106)
chr3 (190-243)||(39288739-39288792)
chr3 (190-243)||(39436948-39437001)
chr3 (190-243)||(40169493-40169546)
chr3 (190-243)||(47901907-47901960)
chr3 (190-238)||(20612739-20612787)
chr3 (190-237)||(26800002-26800049)
chr3 (190-237)||(49670678-49670725)
chr3 (201-243)||(28942632-28942674)
chr3 (190-243)||(10778572-10778625)
chr3 (190-235)||(14633727-14633772)
chr3 (190-243)||(25710712-25710765)
chr3 (190-235)||(29446070-29446115)
chr3 (190-243)||(29955406-29955459)
chr3 (190-243)||(30004560-30004613)
chr3 (190-243)||(30130264-30130317)
chr3 (190-243)||(34238705-34238758)
chr3 (190-243)||(45161219-45161272)
chr3 (190-243)||(45320820-45320873)
chr3 (201-243)||(3830238-3830280)
chr3 (201-243)||(4513472-4513514)
chr3 (201-243)||(15016598-15016640)
chr3 (201-243)||(15286355-15286397)
chr3 (190-228)||(18175909-18175947)
chr3 (201-243)||(46186621-46186663)
chr3 (201-243)||(51759927-51759969)
chr3 (201-238)||(7957077-7957114)
chr3 (201-242)||(20405073-20405114)
chr3 (201-242)||(35533386-35533427)
chr3 (201-238)||(40277935-40277972)
chr3 (190-231)||(40979479-40979520)
chr3 (190-243)||(50261781-50261833)
chr3 (194-243)||(51834786-51834835)
chr3 (201-237)||(50009034-50009070)
chr3 (201-241)||(53701468-53701508)
[»] chr4 (41 HSPs)
chr4 (193-243)||(27427950-27428000)
chr4 (190-243)||(50714405-50714458)
chr4 (190-238)||(4279174-4279222)
chr4 (190-237)||(34361985-34362032)
chr4 (193-243)||(27008250-27008300)
chr4 (190-243)||(6827713-6827766)
chr4 (194-243)||(13064264-13064313)
chr4 (190-243)||(13479377-13479430)
chr4 (190-243)||(34355071-34355124)
chr4 (190-243)||(35415407-35415460)
chr4 (190-243)||(36702107-36702160)
chr4 (190-243)||(41346058-41346111)
chr4 (190-243)||(41620095-41620148)
chr4 (190-243)||(55482310-55482363)
chr4 (193-243)||(18135958-18136008)
chr4 (201-243)||(22099762-22099804)
chr4 (193-243)||(49123166-49123216)
chr4 (201-238)||(11692874-11692911)
chr4 (190-243)||(24474802-24474855)
chr4 (190-235)||(35763794-35763839)
chr4 (190-243)||(38054652-38054705)
chr4 (190-243)||(41920924-41920977)
chr4 (190-243)||(51708867-51708920)
chr4 (190-243)||(52017709-52017762)
chr4 (190-235)||(53717013-53717058)
chr4 (190-243)||(55072497-55072550)
chr4 (190-230)||(50822138-50822178)
chr4 (193-237)||(52429825-52429869)
chr4 (190-237)||(5063117-5063164)
chr4 (193-243)||(16712536-16712586)
chr4 (201-243)||(29420388-29420430)
chr4 (201-243)||(45505743-45505785)
chr4 (190-235)||(123734-123779)
chr4 (201-238)||(5827768-5827805)
chr4 (201-238)||(7642503-7642540)
chr4 (206-243)||(9446180-9446217)
chr4 (201-242)||(12152343-12152384)
chr4 (190-231)||(18830964-18831005)
chr4 (190-243)||(29463753-29463806)
chr4 (203-243)||(11285610-11285650)
chr4 (206-242)||(53307863-53307899)
[»] scaffold0811 (1 HSPs)
scaffold0811 (190-243)||(1483-1536)
[»] scaffold0712 (1 HSPs)
scaffold0712 (190-243)||(5317-5370)
[»] scaffold0709 (1 HSPs)
scaffold0709 (190-243)||(5337-5390)
[»] scaffold0370 (1 HSPs)
scaffold0370 (190-243)||(129-182)
[»] scaffold0179 (1 HSPs)
scaffold0179 (190-243)||(3132-3185)
[»] chr8 (40 HSPs)
chr8 (190-243)||(1163019-1163072)
chr8 (190-243)||(4017010-4017063)
chr8 (190-243)||(4375797-4375850)
chr8 (190-243)||(6146788-6146841)
chr8 (190-243)||(19494226-19494279)
chr8 (190-243)||(21125861-21125914)
chr8 (190-243)||(21509802-21509855)
chr8 (190-243)||(24187674-24187727)
chr8 (190-243)||(38930409-38930462)
chr8 (190-243)||(40493060-40493113)
chr8 (190-238)||(6146627-6146675)
chr8 (190-243)||(1408194-1408247)
chr8 (190-243)||(1525917-1525970)
chr8 (190-243)||(22917767-22917820)
chr8 (190-243)||(29158462-29158515)
chr8 (202-243)||(32040225-32040266)
chr8 (194-243)||(33636430-33636479)
chr8 (190-243)||(40066601-40066654)
chr8 (191-235)||(1685230-1685274)
chr8 (190-237)||(10776338-10776385)
chr8 (193-243)||(16789216-16789266)
chr8 (201-243)||(18549311-18549353)
chr8 (201-243)||(32418530-32418572)
chr8 (190-243)||(8094587-8094640)
chr8 (202-243)||(14495252-14495293)
chr8 (190-235)||(16643883-16643928)
chr8 (194-243)||(22650574-22650623)
chr8 (190-243)||(25131216-25131269)
chr8 (190-235)||(28398879-28398924)
chr8 (201-243)||(15719763-15719805)
chr8 (201-243)||(33526160-33526202)
chr8 (202-243)||(14238857-14238898)
chr8 (194-243)||(24954855-24954904)
chr8 (190-243)||(27341430-27341483)
chr8 (201-238)||(28497367-28497404)
chr8 (201-238)||(29992151-29992188)
chr8 (201-238)||(35115549-35115586)
chr8 (201-237)||(2811555-2811591)
chr8 (190-238)||(6469505-6469553)
chr8 (190-234)||(7272537-7272581)
[»] chr6 (32 HSPs)
chr6 (190-239)||(7155908-7155957)
chr6 (190-243)||(14655610-14655663)
chr6 (190-243)||(17321394-17321447)
chr6 (190-243)||(17321527-17321580)
chr6 (190-243)||(19296246-19296299)
chr6 (190-243)||(24273945-24273998)
chr6 (190-243)||(33801583-33801636)
chr6 (190-238)||(777879-777927)
chr6 (190-237)||(543563-543610)
chr6 (193-243)||(8680883-8680933)
chr6 (190-243)||(317916-317969)
chr6 (190-243)||(494602-494655)
chr6 (190-235)||(15962143-15962188)
chr6 (190-243)||(24692821-24692874)
chr6 (190-243)||(31166977-31167030)
chr6 (190-243)||(31398381-31398434)
chr6 (190-243)||(32885780-32885833)
chr6 (190-243)||(34582637-34582690)
chr6 (200-243)||(17772020-17772063)
chr6 (201-243)||(14428756-14428798)
chr6 (193-243)||(30928888-30928938)
chr6 (190-243)||(2616075-2616128)
chr6 (190-243)||(3356341-3356394)
chr6 (190-243)||(7324033-7324086)
chr6 (190-243)||(11129308-11129361)
chr6 (190-243)||(15076044-15076097)
chr6 (190-243)||(15116779-15116832)
chr6 (190-237)||(10091147-10091194)
chr6 (201-243)||(19275892-19275934)
chr6 (201-243)||(21995172-21995214)
chr6 (193-238)||(6591284-6591329)
chr6 (190-231)||(26375811-26375852)
[»] scaffold0159 (1 HSPs)
scaffold0159 (190-237)||(35111-35158)
[»] scaffold0373 (1 HSPs)
scaffold0373 (190-243)||(8655-8708)
[»] scaffold0210 (1 HSPs)
scaffold0210 (190-243)||(14803-14856)
[»] scaffold0021 (1 HSPs)
scaffold0021 (190-243)||(12290-12343)
[»] scaffold0347 (1 HSPs)
scaffold0347 (190-238)||(4153-4201)
[»] scaffold0051 (1 HSPs)
scaffold0051 (190-236)||(5546-5592)
[»] scaffold0535 (1 HSPs)
scaffold0535 (190-243)||(8868-8920)
[»] scaffold0123 (1 HSPs)
scaffold0123 (190-243)||(17883-17936)
[»] scaffold0016 (1 HSPs)
scaffold0016 (190-243)||(10263-10316)
[»] scaffold0326 (2 HSPs)
scaffold0326 (193-238)||(4130-4175)
scaffold0326 (193-238)||(19312-19357)
[»] scaffold0007 (1 HSPs)
scaffold0007 (201-242)||(2611-2652)
[»] scaffold0002 (1 HSPs)
scaffold0002 (201-237)||(94171-94207)


Alignment Details
Target: chr7 (Bit Score: 129; Significance: 7e-67; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 7205043 - 7204866
Alignment:
Q  13 catcaataacttagccttaaaacagaaactgactaccacaaacaaataaaaatacactaaaaccagtaacatgttaacaattacagacaataccaacaag 112  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  7205043 catcaataacttagccttaaaacagaaactgactaccataaacaaagaaaaatacactaaaaccagtaacatgttaacaattacaaacagtaccaacaag 7204944  T
Q  113 accataatgannnnnnnctcggacctctatgcaattaacttcaacttaagcttaccattcttcttcttcaagccttct 190  Q
    ||||||||||       ||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7204943 accataatgatttttttctcagacctctttgcaattaacttcagcttaagcttaccattcttcttcttcaagccttct 7204866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 21223567 - 21223514
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  21223567 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagagact 21223514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 45073482 - 45073535
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  45073482 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagagact 45073535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 46304222 - 46304275
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  46304222 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagagact 46304275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 48358917 - 48358970
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  48358917 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagagact 48358970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 488873 - 488820
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  488873 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagagact 488820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 1007069 - 1007122
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  1007069 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 1007122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 5308527 - 5308580
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  5308527 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagagact 5308580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 6108537 - 6108590
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  6108537 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 6108590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 7432112 - 7432059
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  7432112 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 7432059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 14738759 - 14738706
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||| |||||||    
T  14738759 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggttagagact 14738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 18311740 - 18311687
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  18311740 ttcaattataatgtgccacgtatgcaaatcatcacaaaagtggggtcagagact 18311687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 39719514 - 39719461
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  39719514 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 39719461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 44344631 - 44344684
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  44344631 ttcagttataatgtgccacgtatgaaaatcatcacaaaagtggggtcagtgact 44344684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 44403092 - 44403145
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  44403092 ttcagttataacgtgccacgtatgcaaatcatcacaaaagtggggtcagagact 44403145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 45021656 - 45021603
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  45021656 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 45021603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 35015059 - 35015107
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  35015059 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcag 35015107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 12894242 - 12894289
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  12894242 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtca 12894289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 1559546 - 1559599
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  1559546 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 1559599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 19783975 - 19783922
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||    
T  19783975 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtgggatcagggact 19783922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 25547331 - 25547384
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||| ||||||||||||||    
T  25547331 ttcagttataatgtgtcacgtatgcaaatcatcacaaaaatggggtcagagact 25547384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 28911738 - 28911685
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  28911738 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 28911685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 30709484 - 30709431
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  30709484 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 30709431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 31732291 - 31732344
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||    
T  31732291 ttcagttataatgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 31732344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 44508879 - 44508826
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  44508879 ttcacttataatgtgccacgtatgcaaatcataacaaaagtggggtcagagact 44508826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 18022526 - 18022478
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  18022526 ttcagttataatgtgccacgtatgcaaataatcacaaaagtggggtcag 18022478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 22871221 - 22871173
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  22871221 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcag 22871173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 17999564 - 17999617
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||| |||||||| |||||||||| ||||    
T  17999564 ttcagttataatgtgccacgtatgcaaattatcacaaacgtggggtcagggact 17999617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 19561308 - 19561255
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||||||| |||| |||||||||||||||||| ||||| ||||    
T  19561308 ttcagttataatgtgccacatatgcaaatcatcacaaaagtggtgtcagggact 19561255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 21554593 - 21554646
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||||||| |||| ||| |||||||||||||||||||| ||||    
T  21554593 ttcagttataatgtgccacatatgcaaaacatcacaaaagtggggtcagggact 21554646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 30352721 - 30352668
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||| ||| ||||| ||||    
T  30352721 ttcagttataatgtgccacgtatgcaaatcatcacaaaaatggagtcagggact 30352668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 31310519 - 31310572
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||| ||| ||||||||||||| |||||||||||||| ||||||||| ||||    
T  31310519 ttcagtcataatgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 31310572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 35210352 - 35210397
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    |||||||||| ||||||||||||| | |||||||||||||||||||    
T  35210352 ttcagttataatgtgccacgtatgcacatcatcacaaaagtggggt 35210397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 37372745 - 37372798
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||  |||||||| |||||||||||||||||||||||| ||||    
T  37372745 ttcagttataatgtatcacgtatgcaaatcatcacaaaagtggggtcagggact 37372798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 39833061 - 39833016
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||    
T  39833061 agttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcag 39833016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 10358152 - 10358110
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  10358152 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 10358110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 19757899 - 19757857
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  19757899 tgtgccacgtatgcaaatcatcacaaaaatggggtcagtgact 19757857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 23816886 - 23816928
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||  |||||||||||||| ||||||||||||||    
T  23816886 tgtgccacgtatacaaatcatcacaaaaatggggtcagagact 23816928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 6846970 - 6847011
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagac 242  Q
    ||||||||||  | ||||||||||||||||||||||||||||    
T  6846970 tgtgccacgtgcgcaaatcatcacaaaagtggggtcagagac 6847011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 35666025 - 35665988
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  35666025 tgtgtcacgtatgcaaatcatcacaaaagtggggtcag 35665988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 32626733 - 32626786
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32626733 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagggact 32626786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 24649510 - 24649457
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  24649510 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagagact 24649457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 48955905 - 48955958
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  48955905 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagagact 48955958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 990247 - 990194
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  990247 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 990194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 2733344 - 2733291
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  2733344 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagagact 2733291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 12361171 - 12361118
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  12361171 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 12361118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 18302223 - 18302276
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  18302223 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggagtcagagact 18302276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 18473432 - 18473379
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  18473432 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 18473379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 29688272 - 29688325
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  29688272 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagtgact 29688325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 41358503 - 41358556
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  41358503 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 41358556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 45290617 - 45290564
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  45290617 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagagact 45290564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 26062117 - 26062070
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  26062117 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtca 26062070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 32728889 - 32728936
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  32728889 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtca 32728936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 7001739 - 7001789
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  7001739 agttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 7001789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 10552156 - 10552202
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcaga 239  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  10552156 agttataatgtgccacgtatgcaaatcatcacaaaagtggggtcaga 10552202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 3679784 - 3679731
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  3679784 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 3679731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 4323989 - 4323936
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||||| ||||    
T  4323989 ttcagttataatgtgccacgtatacaaatcatcacaaaagtggggtcagggact 4323936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 14007647 - 14007594
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||||| ||||    
T  14007647 ttcagttataatgtgccacgtatacaaatcatcacaaaagtggggtcagggact 14007594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 15335134 - 15335187
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  15335134 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 15335187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 18927927 - 18927886
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagac 242  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  18927927 tgtgccacgtgtgtaaatcatcacaaaagtggggtcagagac 18927886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 31258500 - 31258447
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  31258500 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 31258447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 13260146 - 13260099
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||    
T  13260146 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtca 13260099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 17984536 - 17984583
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||    
T  17984536 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtca 17984583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 19622816 - 19622769
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||    
T  19622816 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtca 19622769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 44641275 - 44641318
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggg 233  Q
    |||||||||| ||||||||||||| |||||||||||||||||||    
T  44641275 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggg 44641318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 11822152 - 11822110
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  11822152 tgtgccacgtatgcaaatcatcacaaaaatggggtcagagact 11822110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 41881251 - 41881201
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||| |||||||| |||| |||||||||||||||||||||||| ||||    
T  41881251 agttataatgtgccacatatgcaaatcatcacaaaagtggggtcagggact 41881201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 48609446 - 48609488
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  48609446 tgtgccacgtatgcaaatcatcacaaaaatggggtcagagact 48609488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 19198799 - 19198840
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagac 242  Q
    |||||||||| || ||||||||||||||||||||||||||||    
T  19198799 tgtgccacgtgtgcaaatcatcacaaaagtggggtcagagac 19198840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 32454130 - 32454183
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||||| ||||    
T  32454130 ttcagttataatgtgtcacgtatgcaaatcatcataaaagtggggtcagggact 32454183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 35005545 - 35005492
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||| | ||||||| ||||    
T  35005545 ttcagttataatgtgccacgtatgcaaatcatcacaaaactagggtcagggact 35005492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 35307950 - 35308003
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||| ||||||||| ||||| ||||    
T  35307950 ttcagttataatgtgccacgtatgcaaatcatcgcaaaagtggtgtcagggact 35308003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 34383103 - 34383059
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||    
T  34383103 agttataatgtgtcacgtatgcaaatcatcacaaaagtggggtca 34383059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 21391218 - 21391261
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggg 233  Q
    |||||||||| |||| |||||||| |||||||||||||||||||    
T  21391218 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggg 21391261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 13770638 - 13770596
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  13770638 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 13770596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 18899986 - 18900028
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  18899986 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 18900028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 22919831 - 22919789
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  22919831 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 22919789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 26191507 - 26191465
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  26191507 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 26191465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 33067582 - 33067624
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||    
T  33067582 tgtgccacgtatgcaaatcatcacaaaggtggggtcagggact 33067624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 33380036 - 33379994
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  33380036 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 33379994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 1159680 - 1159733
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||  ||||||| |||| ||||||||| |||||||||||||| ||||    
T  1159680 ttcagttataacgtgccacatatgcaaatcatcataaaagtggggtcagggact 1159733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 4789458 - 4789421
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| | |||||||||||||||||||||||||    
T  4789458 tgtgccacgtgtttaaatcatcacaaaagtggggtcag 4789421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 18079549 - 18079508
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagac 242  Q
    |||||||||| || |||||||||||||||||||| |||||||    
T  18079549 tgtgccacgtgtgcaaatcatcacaaaagtggggccagagac 18079508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 21383262 - 21383217
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    |||||||||| |||||||| |||| |||| ||||||||||||||||    
T  21383262 ttcagttataatgtgccacatatgcaaataatcacaaaagtggggt 21383217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 7818942 - 7818978
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaa 226  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  7818942 ttcagttataatgtgccacgtatgcaaatcatcacaa 7818978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 34808343 - 34808307
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  34808343 tgtgccacgtatgcaaatcatcacaaaaatggggtca 34808307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 10665144 - 10665090
Alignment:
Q  189 cttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  10665144 cttcagttataatgtaccacgtatgtaaatcatcacaaaagtggggtcagagact 10665090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 7814446 - 7814499
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  7814446 ttcagttataatgtgacacgtatgcaaatcatcacaaaagtggggtcagagact 7814499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 7814579 - 7814632
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  7814579 ttcagttataatgtgacacgtatgcaaatcatcacaaaagtggggtcagagact 7814632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 8046489 - 8046436
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  8046489 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagagact 8046436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 19183943 - 19183890
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  19183943 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 19183890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 23989996 - 23989943
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  23989996 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 23989943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 26814068 - 26814121
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  26814068 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 26814121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 38980093 - 38980146
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  38980093 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 38980146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 16900055 - 16900007
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  16900055 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcag 16900007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 16993446 - 16993398
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  16993446 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcag 16993398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 5790738 - 5790785
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  5790738 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtca 5790785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 37271942 - 37271989
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  37271942 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtca 37271989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 40302133 - 40302083
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  40302133 agttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 40302083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 3838103 - 3838156
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||    
T  3838103 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggtgtcagggact 3838156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 17541616 - 17541669
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||    
T  17541616 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggagtcagggact 17541669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 24483558 - 24483505
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||  |||| |||||||| |||||||||||||||||||||||||||||    
T  24483558 ttcagttatcatgtgacacgtatgcaaatcatcacaaaagtggggtcagagact 24483505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 24483691 - 24483638
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||    
T  24483691 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtgggatcagggact 24483638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 38731987 - 38731934
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  38731987 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 38731934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 41791178 - 41791125
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  41791178 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 41791125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 43710539 - 43710486
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||| ||||    
T  43710539 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtgaggtcagggact 43710486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 1497784 - 1497829
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||||    
T  1497784 ttcagttataatgtaccacgtatgcaaatcatcacaaaagtggggt 1497829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 12835482 - 12835433
Alignment:
Q  194 gttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||| ||||    
T  12835482 gttataatgtgccacgtatgcaaatcatcacaaaagtagggtcagggact 12835433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 14392970 - 14393023
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||||||| |||  |||||||||||||||||||||||| ||||    
T  14392970 ttcagttataatgtgccacatatacaaatcatcacaaaagtggggtcagggact 14393023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 20939175 - 20939212
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| |||||||||||||||||||||||||||    
T  20939175 tgtgccacgtgtgtaaatcatcacaaaagtggggtcag 20939212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 26238971 - 26238918
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||  ||||||||||||| |||||||||||||||||||| ||| ||||    
T  26238971 ttcagttattatgtgccacgtatgcaaatcatcacaaaagtggggccagggact 26238918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 41693842 - 41693895
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||| || |||| |||||||| |||||||||||||||||||||||| ||||    
T  41693842 ttcagttgtaatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 41693895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 43789031 - 43789084
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||| ||| | ||||||||||| |||||||||||||||||||||||| ||||    
T  43789031 ttcagtgataatatgccacgtatgcaaatcatcacaaaagtggggtcagggact 43789084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 44985781 - 44985728
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||||||| ||||    
T  44985781 ttcagttataacgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 44985728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 20658219 - 20658171
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| ||||||||||||| |||| ||||||||||||| |||||    
T  20658219 ttcagttataatgtgccacgtatgcaaataatcacaaaagtggagtcag 20658171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 33733019 - 33732971
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| ||||||||||||| ||||||||| |||||| |||||||    
T  33733019 ttcagttataatgtgccacgtatgcaaatcatcataaaagtagggtcag 33732971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 40786620 - 40786573
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||| ||||| |||| |||||||| |||||||||||||||||||||||    
T  40786620 ttcaattataatgtgtcacgtatgcaaatcatcacaaaagtggggtca 40786573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 22881813 - 22881855
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    ||||||| |||| |||||||| |||||||||||||||||||||    
T  22881813 agttataatgtgacacgtatgcaaatcatcacaaaagtggggt 22881855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 26708031 - 26707989
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtgg 232  Q
    |||||||||| |||| |||||||| ||||||||||||||||||    
T  26708031 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtgg 26707989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 31326102 - 31326144
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  31326102 tgtgccacgtatgcaaatcatcacaaaaatggggtcagcgact 31326144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 43592194 - 43592152
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  43592194 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 43592152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 44993910 - 44993952
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| |||| |||||||||    
T  44993910 tgtgccacgtatgcaaatcatcacaaaaatgggatcagagact 44993952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 11713689 - 11713737
Alignment:
Q  195 ttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||| ||||||||||||| |||||| ||||||||| ||||||| ||||    
T  11713689 ttataatgtgccacgtatgcaaatcaccacaaaagttgggtcagggact 11713737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 25750816 - 25750852
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| || |||||||||||||||||||||||    
T  25750816 tgtgccacgtgtgcaaatcatcacaaaagtggggtca 25750852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 32691460 - 32691424
Alignment:
Q  202 gtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||||| |||||||||||||| |||||||||    
T  32691460 gtgccacgtatgcaaatcatcacaaaaatggggtcag 32691424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 35167005 - 35167058
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  35167005 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagagact 35167058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 2217697 - 2217750
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  2217697 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 2217750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 6118334 - 6118387
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  6118334 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 6118387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 15635536 - 15635483
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  15635536 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 15635483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 18633800 - 18633853
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  18633800 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 18633853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 31037556 - 31037503
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  31037556 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagagact 31037503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 35165999 - 35166052
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  35165999 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 35166052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 37090581 - 37090634
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  37090581 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagagact 37090634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 38496580 - 38496527
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  38496580 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagagact 38496527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 5950332 - 5950280
Alignment:
Q  191 tcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||    
T  5950332 tcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcaaagact 5950280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 16616522 - 16616475
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  16616522 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtca 16616475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 294032 - 294085
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  294032 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 294085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 5614369 - 5614422
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||    
T  5614369 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggtgtcagggact 5614422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 16038579 - 16038632
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||| ||||||||||||||||||||||||    
T  16038579 ttcagttataatgtgtcacgtatgcaaataatcacaaaagtggggtcagagact 16038632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 18046191 - 18046244
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||| ||||||||||||||||||||||||    
T  18046191 ttcagttataatgtgacacgtatgcaaattatcacaaaagtggggtcagagact 18046244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 25779001 - 25779054
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  25779001 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 25779054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 27850216 - 27850269
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||||| ||||    
T  27850216 ttcagttataatgtgccacgtatgcaaaccatcacaaaagtggggtcagggact 27850269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 29151677 - 29151624
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  29151677 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 29151624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 29172684 - 29172631
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||    
T  29172684 ttcagttataatgtgccacgtatgcaaataatcacaaaagtggggtcagggact 29172631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 29692932 - 29692985
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||    
T  29692932 ttcagttataatgtgccacgtatgcaaatcatcataaaagtggggtcagggact 29692985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 36577880 - 36577827
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||    
T  36577880 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtgggatcagggact 36577827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 38962933 - 38962986
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  38962933 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 38962986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 42207401 - 42207348
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  42207401 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 42207348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 21050734 - 21050687
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  21050734 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtgaggtca 21050687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 23382149 - 23382202
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||| ||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  23382149 ttcaattataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 23382202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 28550986 - 28550941
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||    
T  28550986 ttcagttataatgtgccatgtatgcaaatcatcacaaaagtggggt 28550941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 29875560 - 29875515
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||    
T  29875560 ttcagttataatgtgccacgtatgcaaatcatcacaaaattggggt 29875515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 30888321 - 30888268
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||||||  |||| |||||||||||||||||||||||| ||||    
T  30888321 ttcagttataatgtgccatatatgcaaatcatcacaaaagtggggtcagggact 30888268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 38786318 - 38786265
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||| || |||||||||||    
T  38786318 ttcagttataatgtgtcacgtatgcaaatcatcacaaaaatgaggtcagagact 38786265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 18286575 - 18286535
Alignment:
Q  203 tgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  18286575 tgccacgtatgtaaatcatcacaaaactggggccagagact 18286535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 25561868 - 25561813
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaa-gtggggtcagagactt 244  Q
    |||||||||| ||||| || |||| |||||||||||||| ||||||||||||||||    
T  25561868 ttcagttataatgtgctacatatgcaaatcatcacaaaaggtggggtcagagactt 25561813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 33335864 - 33335911
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| |||| |||||||| |||| ||||||||||||||||||    
T  33335864 ttcagttataatgtgtcacgtatgcaaataatcacaaaagtggggtca 33335911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 3850675 - 3850717
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| ||||||||||| || ||||||||||||||    
T  3850675 tgtgccacgtatgcaaatcatcacataaatggggtcagagact 3850717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 7075801 - 7075843
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtgg 232  Q
    |||||||||| |||||||| |||| ||||||||||||||||||    
T  7075801 ttcagttataatgtgccacatatgcaaatcatcacaaaagtgg 7075843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 26071440 - 26071398
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||| |||| || |||||||||||||||||||||||||||||    
T  26071440 tgtgctacgtgtgcaaatcatcacaaaagtggggtcagagact 26071398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 4203597 - 4203560
Alignment:
Q  206 cacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  4203597 cacgtatgcaaatcatcacaaaagtggggtcagggact 4203560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 9588462 - 9588499
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  9588462 tgtgccacgtatgtaaattatcacaaaagtggagtcag 9588499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 17070685 - 17070648
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| || ||||||||||||||||||||||||    
T  17070685 tgtgccacgtgtgcaaatcatcacaaaagtggggtcag 17070648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 20690881 - 20690844
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  20690881 tgtgccatgtatgcaaatcatcacaaaagtggggtcag 20690844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 21125113 - 21125166
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||| ||||| |||| |||||||| |||| ||||||||||||||||||| ||||    
T  21125113 ttcaattataatgtgtcacgtatgcaaattatcacaaaagtggggtcagggact 21125166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 29366800 - 29366837
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  29366800 tgtgtcacgtatgtaaatcatcacaaaaatggggtcag 29366837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 3850478 - 3850514
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  3850478 tgtgccacgtatgcaaatcatcacaaaaatggggtca 3850514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 10409088 - 10409048
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggg 233  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  10409088 agttataatgtgtcacgtatgcaaatcatcacaaaagtggg 10409048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 10830690 - 10830642
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||| || ||||| ||||| || ||||||||||||||||||||||||    
T  10830690 ttcagtcatcttgtgtcacgtgtgcaaatcatcacaaaagtggggtcag 10830642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 32888830 - 32888798
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggg 233  Q
    |||||||||| ||||||||||||||||||||||    
T  32888830 tgtgccacgtgtgtaaatcatcacaaaagtggg 32888798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 3151951 - 3152004
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  3151951 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagagact 3152004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 8510375 - 8510322
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  8510375 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagagact 8510322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 12673845 - 12673898
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  12673845 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagagact 12673898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 13584164 - 13584111
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  13584164 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 13584111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 16123301 - 16123248
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  16123301 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagagact 16123248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 19656743 - 19656796
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  19656743 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 19656796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 22156090 - 22156037
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  22156090 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 22156037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 28427448 - 28427501
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  28427448 ttcagttataatgtgccatgtatgcaaatcatcacaaaagtggggtcagagact 28427501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 37507027 - 37506974
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  37507027 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 37506974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 4950207 - 4950255
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  4950207 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcag 4950255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 275602 - 275549
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  275602 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 275549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 5345529 - 5345582
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||    
T  5345529 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtgggatcagggact 5345582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 7518287 - 7518340
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||| ||||||||    
T  7518287 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggccagagact 7518340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 10977138 - 10977085
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||||||| ||||    
T  10977138 ttcagttataatgtaccacgtatgcaaatcatcacaaaagtggggtcagggact 10977085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 20757559 - 20757506
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||    
T  20757559 ttcagttataatgtgccacgtatgcaaataatcacaaaagtggggtcagggact 20757506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 20907297 - 20907350
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  20907297 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 20907350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 21159656 - 21159709
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||    
T  21159656 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggtgtcagggact 21159709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 36673113 - 36673076
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36673113 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 36673076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 39072053 - 39072106
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||    
T  39072053 ttcagttataatgtgccacgtatgcaaattatcacaaaagtggggtcagggact 39072106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 39288739 - 39288792
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  39288739 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 39288792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 39436948 - 39437001
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||||||| |||| |||||||||||||||||||||||| ||||    
T  39436948 ttcagttataatgtgccacatatgcaaatcatcacaaaagtggggtcagggact 39437001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 40169493 - 40169546
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  40169493 ttcagttataatgtgccacgtatgcgaatcatcacaaaagtggggtcagggact 40169546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 47901960 - 47901907
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||    
T  47901960 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggagtcagggact 47901907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 20612739 - 20612787
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  20612739 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcag 20612787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 26800049 - 26800002
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||    
T  26800049 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtca 26800002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 49670678 - 49670725
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||    
T  49670678 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtca 49670725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 28942674 - 28942632
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  28942674 tgtgccacgtatgcaaatcatcacaaaagtgggatcagagact 28942632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 10778572 - 10778625
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||||||| |||| |||||||||||||||| ||||||| ||||    
T  10778572 ttcagttataatgtgccacatatgcaaatcatcacaaaagtagggtcagggact 10778625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 14633727 - 14633772
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||    
T  14633727 ttcagttataatgtgccacgtatgcaaatcttcacaaaagtggggt 14633772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 25710712 - 25710765
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||  | |||||||||||||||| ||||||||||    
T  25710712 ttcagttataatgtgccacgtatacagatcatcacaaaagtggagtcagagact 25710765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 29446115 - 29446070
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||    
T  29446115 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggt 29446070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 29955459 - 29955406
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||| ||| |||||||||||||||||||||||| ||||    
T  29955459 ttcagttataatgtgacacgaatgcaaatcatcacaaaagtggggtcagggact 29955406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 30004613 - 30004560
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||| ||| |||||||||||||||||||||||| ||||    
T  30004613 ttcagttataatgtgtcacgcatgcaaatcatcacaaaagtggggtcagggact 30004560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 30130317 - 30130264
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||| |||| |||| |||||||| |||||||||||||||||||| ||||||||    
T  30130317 ttcagctataatgtgtcacgtatgcaaatcatcacaaaagtggggccagagact 30130264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 34238758 - 34238705
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||| ||||||||| ||||| ||||    
T  34238758 ttcagttataatgtgccacgtatgcaaatcatctcaaaagtggagtcagggact 34238705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 45161272 - 45161219
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||| ||||| ||||    
T  45161272 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggtgtcagggact 45161219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 45320820 - 45320873
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||| ||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  45320820 ttcaattataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 45320873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 3830280 - 3830238
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  3830280 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 3830238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 4513472 - 4513514
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  4513472 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 4513514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 15016598 - 15016640
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  15016598 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 15016640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 15286355 - 15286397
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| |||| |||||||||    
T  15286355 tgtgccacgtatgcaaatcatcacaaaaatgggatcagagact 15286397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 18175947 - 18175909
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaa 228  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  18175947 ttcagttataatgtgccacgtatgcaaatcatcacaaaa 18175909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 46186621 - 46186663
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  46186621 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 46186663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 51759969 - 51759927
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  51759969 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 51759927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 7957077 - 7957114
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| || ||||||||||||||||||||||||    
T  7957077 tgtgccacgtgtgcaaatcatcacaaaagtggggtcag 7957114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 20405073 - 20405114
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagac 242  Q
    |||| |||||||| |||||||||||||||||| |||||||||    
T  20405073 tgtgtcacgtatgcaaatcatcacaaaagtggagtcagagac 20405114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 35533427 - 35533386
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagac 242  Q
    |||||||||| || ||||||||||||||||||||| ||||||    
T  35533427 tgtgccacgtgtgcaaatcatcacaaaagtggggttagagac 35533386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 40277972 - 40277935
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| || ||||||||||||||||||||||||    
T  40277972 tgtgccacgtgtgcaaatcatcacaaaagtggggtcag 40277935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 40979520 - 40979479
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtg 231  Q
    |||||||||| |||| |||||||| |||||||||||||||||    
T  40979520 ttcagttataatgtgacacgtatgcaaatcatcacaaaagtg 40979479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 50261781 - 50261833
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||| | ||| |||||||||||||||||| ||||||||||    
T  50261781 ttcagttataatgtgcca-gcatgcaaatcatcacaaaagtggagtcagagact 50261833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 51834786 - 51834835
Alignment:
Q  194 gttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||| |||| |||||||| |||||||||||| ||||||||||| ||||    
T  51834786 gttataatgtgtcacgtatgcaaatcatcacaatagtggggtcagggact 51834835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 50009070 - 50009034
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| || |||||||||||||||||||||||    
T  50009070 tgtgccacgtgtgcaaatcatcacaaaagtggggtca 50009034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 53701508 - 53701468
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagaga 241  Q
    ||||||||||||| |||||||||||||| |||||| |||||    
T  53701508 tgtgccacgtatgcaaatcatcacaaaaatggggttagaga 53701468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 27428000 - 27427950
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  27428000 agttatattgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 27427950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 50714405 - 50714458
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  50714405 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 50714458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 4279174 - 4279222
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  4279174 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcag 4279222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 34361985 - 34362032
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  34361985 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtca 34362032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 27008250 - 27008300
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  27008250 agttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagagact 27008300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 6827713 - 6827766
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||    
T  6827713 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtgggatcagggact 6827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 13064313 - 13064264
Alignment:
Q  194 gttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  13064313 gttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 13064264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 13479430 - 13479377
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  13479430 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 13479377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 34355124 - 34355071
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||    
T  34355124 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggccagggact 34355071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 35415460 - 35415407
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||    
T  35415460 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggagtcagggact 35415407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 36702160 - 36702107
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  36702160 ttcagtcataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 36702107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 41346058 - 41346111
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||    
T  41346058 ttcagttataatgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 41346111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 41620095 - 41620148
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||    
T  41620095 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggagtcagggact 41620148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 55482310 - 55482363
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  55482310 ttcaattataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 55482363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 18135958 - 18136008
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  18135958 agttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagtgact 18136008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 22099762 - 22099804
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  22099762 tgtgccacgtatgcaaatcatcacaaaaatggggtcagagact 22099804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 49123166 - 49123216
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  49123166 agttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagtgact 49123216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 11692911 - 11692874
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  11692911 tgtgccacgtatgaaaatcatcacaaaagtggggtcag 11692874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 24474802 - 24474855
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||||| ||||    
T  24474802 ttcagttataatgtgtcacgtatgcaaatcatcagaaaagtggggtcagggact 24474855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 35763794 - 35763839
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||||    
T  35763794 ttcagttataatgtgctacgtatgtaaatcatcacaaaattggggt 35763839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 38054705 - 38054652
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| ||||||||||||||||||| |||| ||||    
T  38054705 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtgggatcagggact 38054652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 41920924 - 41920977
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||| ||||||| ||||    
T  41920924 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtagggtcagggact 41920977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 51708867 - 51708920
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| ||||||||||||||||||| |||| ||||    
T  51708867 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtgggatcagggact 51708920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 52017709 - 52017762
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||| ||||||||| ||||| ||||    
T  52017709 ttcagttataatgtgccacgtatgcaaatcatcgcaaaagtggtgtcagggact 52017762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 53717013 - 53717058
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||    
T  53717013 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggt 53717058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 55072550 - 55072497
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||| ||||||||| ||||| ||||    
T  55072550 ttcagttataatgtgccacgtatgcaaatcatcgcaaaagtggtgtcagggact 55072497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 50822138 - 50822178
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagt 230  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  50822138 ttcagttataatgtgccacgtatgcaaatcatcacaaaagt 50822178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 52429869 - 52429825
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||    
T  52429869 agttataatgtgccacgtatgcaaatcatcacaaaaatggggtca 52429825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 5063164 - 5063117
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    ||||||||||  ||||||| |||| |||||||||||||||||||||||    
T  5063164 ttcagttataacgtgccacatatgcaaatcatcacaaaagtggggtca 5063117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 16712536 - 16712586
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||| |||||||| |||| |||||||||||||||||| ||||| ||||    
T  16712536 agttataatgtgccacatatgcaaatcatcacaaaagtggcgtcagggact 16712586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 29420388 - 29420430
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| | ||||||||||||||||||| |||||||    
T  29420388 tgtgccacgtatgcatatcatcacaaaagtggggttagagact 29420430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 45505743 - 45505785
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  45505743 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 45505785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 123734 - 123779
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    |||||||||| ||||||||||||| |||||| ||||||||| ||||    
T  123734 ttcagttataatgtgccacgtatgcaaatcaccacaaaagtagggt 123779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 5827805 - 5827768
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  5827805 tgtgccacatatgcaaatcatcacaaaagtggggtcag 5827768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 7642503 - 7642540
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| || ||||||||||||||||||||||||    
T  7642503 tgtgccacgtgtgcaaatcatcacaaaagtggggtcag 7642540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 243
Target Start/End: Original strand, 9446180 - 9446217
Alignment:
Q  206 cacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  9446180 cacgtatgcaaatcatcacaaaagtggggtcagggact 9446217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 12152343 - 12152384
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagac 242  Q
    |||||||||  || ||||||||||||||||||||||||||||    
T  12152343 tgtgccacgagtgcaaatcatcacaaaagtggggtcagagac 12152384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 18831005 - 18830964
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtg 231  Q
    |||||||||| |||| |||||||| |||||||||||||||||    
T  18831005 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtg 18830964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 29463753 - 29463806
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||| ||||| |||| |||||||| |||||||||||||| ||||||||| ||||    
T  29463753 ttcaattataatgtgtcacgtatgcaaatcatcacaaaaatggggtcagggact 29463806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 11285650 - 11285610
Alignment:
Q  203 tgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||| ||||| |||||||||||||| ||||||||||||||    
T  11285650 tgccatgtatgcaaatcatcacaaaaatggggtcagagact 11285610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 53307899 - 53307863
Alignment:
Q  206 cacgtatgtaaatcatcacaaaagtggggtcagagac 242  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  53307899 cacgtgtgtaaatcatcacaaaagtgaggtcagagac 53307863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 1483 - 1536
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||||||| |||| |||||||||||||||||||||||||||||    
T  1483 ttcagttataatgtgccacatatgcaaatcatcacaaaagtggggtcagagact 1536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 5370 - 5317
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  5370 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagtgact 5317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 5390 - 5337
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  5390 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagtgact 5337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 129 - 182
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  129 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 3132 - 3185
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  3132 ttcagttataatgtaccacgtatgcaaatcatcacaaaagtggggtcagagact 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 1163072 - 1163019
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  1163072 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagagact 1163019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 4017063 - 4017010
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  4017063 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 4017010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 4375850 - 4375797
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  4375850 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 4375797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 6146788 - 6146841
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  6146788 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 6146841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 19494279 - 19494226
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  19494279 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 19494226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 21125861 - 21125914
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  21125861 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagagact 21125914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 21509855 - 21509802
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  21509855 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 21509802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 24187727 - 24187674
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  24187727 ttcagttataatgtgccaagtatgcaaatcatcacaaaagtggggtcagagact 24187674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 38930462 - 38930409
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  38930462 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 38930409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 40493113 - 40493060
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  40493113 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 40493060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 6146675 - 6146627
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  6146675 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcag 6146627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 1408194 - 1408247
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| | ||||||||||| |||||||||||||||||||||||| ||||    
T  1408194 ttcagttataatatgccacgtatgcaaatcatcacaaaagtggggtcagtgact 1408247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 1525970 - 1525917
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||||||| |||| |||||||||||||||||||||||| ||||    
T  1525970 ttcagttataatgtgccacttatgcaaatcatcacaaaagtggggtcagggact 1525917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 22917767 - 22917820
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  22917767 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 22917820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 29158515 - 29158462
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||| |||||||    
T  29158515 ttcagttatattgtgtcacgtatataaattatcacaaaagtggggtaagagact 29158462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 32040225 - 32040266
Alignment:
Q  202 gtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  32040225 gtgccacgtatgcaaatcatcacaaaagtggggtcagagact 32040266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 33636479 - 33636430
Alignment:
Q  194 gttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  33636479 gttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 33636430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 40066654 - 40066601
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  40066654 ttcagttataatgtgtcacgtatgcaaatcatcataaaagtggggtcagagact 40066601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 1685274 - 1685230
Alignment:
Q  191 tcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  1685274 tcagttataatgtgccacgtatgcaaatcatcacaaaagtggggt 1685230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 10776338 - 10776385
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  10776338 ttcagtcataatgtgccacgtatgaaaatcatcacaaaagtggggtca 10776385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 16789216 - 16789266
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  16789216 agttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 16789266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 18549353 - 18549311
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  18549353 tgtgccacgtatgcaaatcatcacaaaaatggggtcagagact 18549311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 32418530 - 32418572
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  32418530 tgtgccacgtatgcaaatcatcacaaaaatggggtcagagact 32418572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 8094640 - 8094587
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||| ||||||||| ||||    
T  8094640 ttcagttataatgtgtcacgtatgcaaatcatcacaaaaatggggtcagggact 8094587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 14495252 - 14495293
Alignment:
Q  202 gtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  14495252 gtgccacgtatgcaaatcatcacaaaagtggggtcagggact 14495293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 16643883 - 16643928
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||    
T  16643883 ttcagttataatgtgccacgtatgcaaatcatcacaaaattggggt 16643928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 22650623 - 22650574
Alignment:
Q  194 gttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||| ||||||||||||| |||||||||||||||||||| ||| ||||    
T  22650623 gttataatgtgccacgtatgcaaatcatcacaaaagtggggccagggact 22650574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 25131269 - 25131216
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||||| ||||    
T  25131269 ttcagttataatgtgtcacgtatgcaaatcatcataaaagtggggtcagggact 25131216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 28398879 - 28398924
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||    
T  28398879 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggt 28398924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 15719805 - 15719763
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  15719805 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 15719763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 33526202 - 33526160
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  33526202 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 33526160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 14238898 - 14238857
Alignment:
Q  202 gtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||||| |||||||||||||| ||||||||| ||||    
T  14238898 gtgccacgtatgcaaatcatcacaaaaatggggtcagggact 14238857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 24954855 - 24954904
Alignment:
Q  194 gttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||| |||| ||| |||| |||||||||||||||||||||||| ||||    
T  24954855 gttataatgtgtcacttatgcaaatcatcacaaaagtggggtcagggact 24954904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 27341430 - 27341483
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||| | ||| || | ||||||||||||||||||||    
T  27341430 ttcagttataatgtgccacgtaagcaaaccaccgcaaaagtggggtcagagact 27341483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 28497404 - 28497367
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| || ||||||||||||||||||||||||    
T  28497404 tgtgccacgtgtgcaaatcatcacaaaagtggggtcag 28497367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 29992151 - 29992188
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  29992151 tgtgtcacgtgtgtaaatcatcacaaaagtggggtcag 29992188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 35115549 - 35115586
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  35115549 tgtgtcacgtatgcaaatcatcacaaaagtggggtcag 35115586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 2811591 - 2811555
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    ||||||||||||  |||||||||||||||||||||||    
T  2811591 tgtgccacgtatacaaatcatcacaaaagtggggtca 2811555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 6469505 - 6469553
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||| ||| |||||||||| | ||||| |||||||||||||||||||    
T  6469505 ttcagtcataatgtgccacgtgtttaaataatcacaaaagtggggtcag 6469553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 7272581 - 7272537
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtgggg 234  Q
    |||||||||| |||  |||||||| ||||||||||||||||||||    
T  7272581 ttcagttataatgtaacacgtatgcaaatcatcacaaaagtgggg 7272537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 7155957 - 7155908
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcaga 239  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  7155957 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcaga 7155908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 14655610 - 14655663
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  14655610 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 14655663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 17321394 - 17321447
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  17321394 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 17321447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 17321527 - 17321580
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  17321527 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 17321580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 19296246 - 19296299
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||| ||||    
T  19296246 ttcagttataatgtgccacatatgtaaatcatcacaaaagtggggtcagggact 19296299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 24273998 - 24273945
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  24273998 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 24273945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 33801583 - 33801636
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  33801583 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 33801636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 777879 - 777927
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  777879 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtcag 777927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 543563 - 543610
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  543563 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtca 543610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 8680933 - 8680883
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  8680933 agttataatgtgccacgtatgcaaatcatcacaaaagtggggtcagggact 8680883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 317969 - 317916
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| ||||||||||||||||||| |||||||||    
T  317969 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtgggatcagagact 317916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 494602 - 494655
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| | |||||||||||||||||||||| ||||    
T  494602 ttcagttataatgtgccacgtatgcagatcatcacaaaagtggggtcagggact 494655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 15962188 - 15962143
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggt 235  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  15962188 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggt 15962143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 24692821 - 24692874
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||| ||||    
T  24692821 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtgaggtcagggact 24692874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 31167030 - 31166977
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||    
T  31167030 ttcagttataatgtgccacgtatgcaaataatcacaaaagtggggtcagggact 31166977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 31398381 - 31398434
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  31398381 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 31398434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 32885833 - 32885780
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||| ||||||||    
T  32885833 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtaggggcagagact 32885780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 34582690 - 34582637
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||    
T  34582690 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtgggatcagggact 34582637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 17772063 - 17772020
Alignment:
Q  200 ttgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||||||| |||||||||||||| ||||||||||||||    
T  17772063 ttgtgccacgtatgcaaatcatcacaaaaatggggtcagagact 17772020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 14428798 - 14428756
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  14428798 tgtgccacgtatgcaaatcatcacaaaaatggggtcagagact 14428756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 30928888 - 30928938
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  30928888 agttataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 30928938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 2616075 - 2616128
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| ||||||||||||||||| |||||| ||||    
T  2616075 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtgtggtcagggact 2616128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 3356341 - 3356394
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||| | ||||||||||||||||||||||    
T  3356341 ttcagttataatgtgtcacgtatgcaaataaacacaaaagtggggtcagagact 3356394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 7324033 - 7324086
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||||| |||||| ||||||||| |||||||||||||| ||||    
T  7324033 ttcagttataatgtgccccgtatgcaaatcatcataaaagtggggtcagggact 7324086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 11129361 - 11129308
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||  | ||||||||||| |||||||||||||||||||||||| ||||    
T  11129361 ttcagttatcatctgccacgtatgcaaatcatcacaaaagtggggtcagggact 11129308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 15076044 - 15076097
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||||| ||||    
T  15076044 ttcagttataatgtgtcacgtatgcaaatcatcataaaagtggggtcagggact 15076097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 15116832 - 15116779
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| |||| |||||||| |||||||||||||||||||| ||| ||||    
T  15116832 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtggggacagggact 15116779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 10091194 - 10091147
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| |||| |||||||| ||||||||| |||||||||||||    
T  10091194 ttcagttataatgtgtcacgtatgcaaatcatcataaaagtggggtca 10091147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 19275892 - 19275934
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  19275892 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 19275934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 21995214 - 21995172
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  21995214 tgtgccacgtatgcaaatcatcacaaaaatggggtcagggact 21995172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 6591284 - 6591329
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    ||||||| |||| |||||||| |||||||||||||||||| |||||    
T  6591284 agttataatgtgtcacgtatgcaaatcatcacaaaagtggagtcag 6591329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 26375852 - 26375811
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtg 231  Q
    |||||||||| |||| |||||||| |||||||||||||||||    
T  26375852 ttcagttataatgtgtcacgtatgcaaatcatcacaaaagtg 26375811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 35111 - 35158
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  35111 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggtca 35158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 8708 - 8655
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||    
T  8708 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtgggatcagggact 8655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 14856 - 14803
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||    
T  14856 ttcagttataatgtgccacgtatgcaaatcatcacaaaagtggggccagggact 14803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 12343 - 12290
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||||| ||||    
T  12343 ttcagttataatgtgccacgtatacaaatcatcacaaaagtggggtcagggact 12290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 4153 - 4201
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  4153 ttcagttataatgtgccacgtatacaaatcatcacaaaagtggggtcag 4201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 5546 - 5592
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtc 236  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  5546 ttcagttataatgtgccacgtatgcaaatcatcacaaacgtggggtc 5592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 8868 - 8920
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||||||||| ||||||||||||| |||||||||| ||||||||||||| ||||    
T  8868 ttcagttataatgtgccacgtatgcaaatcatcac-aaagtggggtcagggact 8920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 17883 - 17936
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||||||| ||||    
T  17883 ttcagttataaagtgacacgtatgcaaatcatcacaaaagtggggtcagggact 17936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 10316 - 10263
Alignment:
Q  190 ttcagttatattgtgccacgtatgtaaatcatcacaaaagtggggtcagagact 243  Q
    |||| ||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  10316 ttcaattataatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggact 10263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 4175 - 4130
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    ||||||| ||||||||||||| |||||||| || ||||||||||||    
T  4175 agttataatgtgccacgtatgcaaatcatcccagaagtggggtcag 4130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 19357 - 19312
Alignment:
Q  193 agttatattgtgccacgtatgtaaatcatcacaaaagtggggtcag 238  Q
    ||||||| ||||||||||||| |||||||| || ||||||||||||    
T  19357 agttataatgtgccacgtatgcaaatcatcccagaagtggggtcag 19312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 2652 - 2611
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtcagagac 242  Q
    |||||||||| || |||| |||||||||||||||||||||||    
T  2652 tgtgccacgtgtgcaaataatcacaaaagtggggtcagagac 2611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 94207 - 94171
Alignment:
Q  201 tgtgccacgtatgtaaatcatcacaaaagtggggtca 237  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  94207 tgtgccacgtatgcaaatcatcacaaaaatggggtca 94171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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