View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18346_high_7 (Length: 332)
Name: NF18346_high_7
Description: NF18346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18346_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 21 - 310
Target Start/End: Original strand, 37585123 - 37585421
Alignment:
| Q |
21 |
agggcactattgtaattcaataaaccagagggtttcttttaggagggaaaaagatctgtcaaagagtttggtttgttcatcaaatatgagtcccatta-- |
118 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
37585123 |
agggcactattgtaatccaataaaccagagggtttcttttaggagggaaaaagatatgtcaaagagtttggtttgttcatcaaatatgagtcccattaca |
37585222 |
T |
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| Q |
119 |
-------cacaaatcagttaaaatgtttcttggctattttagtgcatcaattttgctatgaatcaactcgggtttgtaatgactaattttaacatgtttc |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37585223 |
caaattacacaaatcagttaaaatgtttcttggctattttagtgcatcaattttgctatgaatcaactcgggtttgtaatgactaattttaacatgtttc |
37585322 |
T |
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| Q |
212 |
ttgttaattttaaagttggctggcttgtagcaaaatctttaatcaattggaattgcaatgatatccatgatcacttaaacaaatttgcaaagattcgtt |
310 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37585323 |
ttgttaattttaaagttggttggcttgtagcaaaatctttaatcaattggaattgcaatgatatccatgatcacttaaacaaatttgcaaagattcgtt |
37585421 |
T |
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