View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18346_low_12 (Length: 290)
Name: NF18346_low_12
Description: NF18346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18346_low_12 |
 | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
| [»] scaffold0366 (1 HSPs) |
| | |
|
| [»] scaffold0118 (1 HSPs) |
| | |
|
| [»] scaffold0119 (1 HSPs) |
| | |
|
| [»] scaffold0038 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 161; Significance: 7e-86; HSPs: 20)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 111 - 271
Target Start/End: Original strand, 38581681 - 38581841
Alignment:
| Q |
111 |
accaactgagttatgctcacgaggaaaccatcttcctattattagctaattaagtgacattgtcacctcttcttggaccgacattatatatcacattaat |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38581681 |
accaactgagttatgctcacgaggaaaccatcttcctattattagctaattaagtgacattgtcacctcttcttggaccgacattatatatcacattaat |
38581780 |
T |
|
| Q |
211 |
ttggtgttatttctaatgtaatgcaggaattagcgttaccattacctgatcaagtagatga |
271 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38581781 |
ttggtgttatttctaatgtaatgcaggaattagcgttaccattacctgatcaagtagatga |
38581841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 38581543 - 38581653
Alignment:
| Q |
1 |
gacataagaaactcatcttcttattttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgaga |
100 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| ||||| |
|
|
| T |
38581543 |
gacataagaaaatcatcttcttattttatttattttttggtcaagtagcctagtggttagaatacaccttttttaagatgaataagtgggatgtccgagg |
38581642 |
T |
|
| Q |
101 |
ttcgaatctca |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
38581643 |
ttcgaatctca |
38581653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 38606375 - 38606441
Alignment:
| Q |
205 |
attaatttggtgttatttctaatgtaatgcaggaattagcgttaccattacctgatcaagtagatga |
271 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
38606375 |
attaatttggtgttatttttaatttaatgcaggaattagcattaccattacctgatcaagtagatga |
38606441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 271
Target Start/End: Original strand, 38563512 - 38563633
Alignment:
| Q |
147 |
tattattagctaattaagtgacattgtcacctcttcttggaccgacattatatatcacat--taatttggtgttatttctaatgtaatgcaggaattagc |
244 |
Q |
| |
|
|||||||| |||||||||||||| | ||||||||| |||||||||| | ||| ||||| |||||||||||||||| | || |||| ||||||||||| |
|
|
| T |
38563512 |
tattattaactaattaagtgacactatcacctctt---ggaccgacatga-ataacacatattaatttggtgttattt-tcatttaatacaggaattagc |
38563606 |
T |
|
| Q |
245 |
gttaccattacctgatcaagtagatga |
271 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
38563607 |
gttaccgttacctgatcaagtagatga |
38563633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 30737108 - 30737042
Alignment:
| Q |
32 |
attttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccga |
98 |
Q |
| |
|
||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||| ||| |||| |
|
|
| T |
30737108 |
atttttttttcaagtagcctagtgactagaattcacattttttaaggtgaataagtgggatgtccga |
30737042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 34107410 - 34107344
Alignment:
| Q |
23 |
attttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||| ||| |||||| ||||||||| ||||||| |||||| ||||||||| ||||||||||||||| |
|
|
| T |
34107410 |
attttttttttttttttgtcaagtagtctagtggctagaattcacatttttcaaggtgaataagtgg |
34107344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 17896944 - 17896888
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| || |||||| ||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
17896944 |
tttttttgttaagtagtttagtggttagaattcacattttttaaggtgaataagtgg |
17896888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 33124337 - 33124386
Alignment:
| Q |
36 |
tttggtcaagtagcctagtggttagaatacacattttttaaggtgaataa |
85 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
33124337 |
tttggtcaagtagtatagtggttagaattcaccttttttaaggtgaataa |
33124386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 44487736 - 44487809
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
|||||| |||| |||| ||||||||||||| ||| ||||||||||||||||||||| ||| ||| | |||||| |
|
|
| T |
44487736 |
tttttttgtcaggtaggttagtggttagaattcaccttttttaaggtgaataagtgggatgtccggggttcgaa |
44487809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 25463235 - 25463287
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataa |
85 |
Q |
| |
|
|||||| |||||||||||||||||||||||| || ||||| ||||||||||| |
|
|
| T |
25463235 |
tttttttgtcaagtagcctagtggttagaattcatttttttcaaggtgaataa |
25463287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 35352373 - 35352429
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| ||||||||| |||||| |||||| ||||||||| ||||||||||||||| |
|
|
| T |
35352373 |
tttttttgtcaagtagtctagtgactagaattcacatttttcaaggtgaataagtgg |
35352429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 26975266 - 26975320
Alignment:
| Q |
31 |
tattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataa |
85 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||| || |||||||| |||||||| |
|
|
| T |
26975266 |
tatttttttgtcaagtagcgtagtggttagaattaaccttttttaaagtgaataa |
26975320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 39334841 - 39334906
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||| ||| |||||| ||||||||| ||||||| |||||| ||| ||||| || |||||||||||| |
|
|
| T |
39334841 |
ttttttttttttttttgtcaagtagtctagtggctagaattcacctttttcaaagtgaataagtgg |
39334906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 5613084 - 5613056
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
5613084 |
ttttttggtcaagtagcctagtggttaga |
5613056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 6282362 - 6282306
Alignment:
| Q |
32 |
attttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
||||||| |||||||| ||||||||||||| ||||||||| || ||||||||||| |
|
|
| T |
6282362 |
atttttttgtcaagtaatttagtggttagaattcacatttttcaaagtgaataagtg |
6282306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 62
Target Start/End: Original strand, 10915522 - 10915550
Alignment:
| Q |
34 |
tttttggtcaagtagcctagtggttagaa |
62 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
10915522 |
tttttggtcaagtagcctagtggttagaa |
10915550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 23664095 - 23664043
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataa |
85 |
Q |
| |
|
|||||| ||||||||| |||||| ||||||| ||| ||||| ||||||||||| |
|
|
| T |
23664095 |
tttttttgtcaagtagtctagtgattagaattcacttttttcaaggtgaataa |
23664043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 34018043 - 34018112
Alignment:
| Q |
35 |
ttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||| || |||||||||||||||| || ||||| |||||| |
|
|
| T |
34018043 |
ttttggtcaggtagcctagtggttagaattcac--cttataaggtgaataagtggggtgtccgaggttcgaa |
34018112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 34644474 - 34644510
Alignment:
| Q |
53 |
gtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
34644474 |
gtggttagaattcacaatttttaaggtgaataagtgg |
34644510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 36182772 - 36182744
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
36182772 |
ttttttggtcaagtagcctagtggttaga |
36182744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 22)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 30203389 - 30203322
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttagaatacacatttttt-aaggtgaataagtgga |
90 |
Q |
| |
|
|||||||| | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
30203389 |
ttttatttttatttttgtcaagtagcctagtggttagaatacacattttttcaagatgaataagtgga |
30203322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 21664204 - 21664147
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgga |
90 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| ||| | ||| |||||||||||| |
|
|
| T |
21664204 |
ttttttggtcaagtagcctagtggttagaattcacctttctcaagatgaataagtgga |
21664147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 21672968 - 21672911
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgga |
90 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| ||| | ||| |||||||||||| |
|
|
| T |
21672968 |
ttttttggtcaagtagcctagtggttagaattcacctttctcaagatgaataagtgga |
21672911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 49039414 - 49039470
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||| |||||||||||||| |||||| ||| ||||| ||||||||||||||| |
|
|
| T |
49039414 |
ttttttggttaagtagcctagtggctagaattcacctttttcaaggtgaataagtgg |
49039470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 20610864 - 20610809
Alignment:
| Q |
34 |
tttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||||| |||| ||||||| |||||| ||| ||||||||||||||||||||| |
|
|
| T |
20610864 |
tttttggtcaggtagtctagtggctagaattcaccttttttaaggtgaataagtgg |
20610809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 33359943 - 33359887
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| || |||||||||||||| |||||| ||| ||||| ||||||||||||||| |
|
|
| T |
33359943 |
tttttttgttaagtagcctagtggctagaattcacctttttcaaggtgaataagtgg |
33359887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 54854139 - 54854203
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
|||| ||| |||||| ||||||||| ||||||| |||||| ||| ||||| |||||||||||||| |
|
|
| T |
54854139 |
ttttttttttttttttgtcaagtagtctagtggctagaattcacttttttcaaggtgaataagtg |
54854203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 18740898 - 18740941
Alignment:
| Q |
46 |
tagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
18740898 |
tagcctagtggttagaatgaacatttttcaaggtgaataagtgg |
18740941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 27922006 - 27921967
Alignment:
| Q |
49 |
cctagtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
27922006 |
cctagtggttagaattcacattttttaagatgaataagtg |
27921967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 39449505 - 39449470
Alignment:
| Q |
53 |
gtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |
|
|
| T |
39449505 |
gtggttagaattcacattttttaaggtgaataagtg |
39449470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 8998347 - 8998400
Alignment:
| Q |
34 |
tttttggtcaagtagcctagtggttagaatacacatttt-ttaaggtgaataagt |
87 |
Q |
| |
|
|||||||| ||||||||||||| ||||||| |||||||| ||||||||||||||| |
|
|
| T |
8998347 |
tttttggtgaagtagcctagtg-ttagaattcacatttttttaaggtgaataagt |
8998400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 41492470 - 41492524
Alignment:
| Q |
35 |
ttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||||||| |||||||| |||||| ||| ||||| ||||| ||||||||| |
|
|
| T |
41492470 |
ttttggtcaagtaacctagtggctagaattcacctttttcaaggtaaataagtgg |
41492524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 21476052 - 21476106
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||| ||| |||| ||||||||||| |
|
|
| T |
21476052 |
ttttttggtcaagtagcctagtggctagaattcac--tttataagatgaataagtgg |
21476106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 23226676 - 23226729
Alignment:
| Q |
35 |
ttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
|||| ||||||||| |||||| || ||| |||||||||||||||||||||||| |
|
|
| T |
23226676 |
tttttgtcaagtagtatagtggctataattcacattttttaaggtgaataagtg |
23226729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 33524220 - 33524265
Alignment:
| Q |
40 |
gtcaagtagcctagtggttagaatacacattttttaaggtgaataa |
85 |
Q |
| |
|
||||||||| |||||||||| ||| ||||||||||| ||||||||| |
|
|
| T |
33524220 |
gtcaagtagtctagtggttaaaattcacattttttatggtgaataa |
33524265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 36257818 - 36257764
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||||| ||||||||||||| |||||| ||| ||||||| |||||||||||| |
|
|
| T |
36257818 |
ttttttggtctagtagcctagtggctagaattcac--tttttaaagtgaataagtgg |
36257764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 47416582 - 47416521
Alignment:
| Q |
45 |
gtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
||||| ||||||||||||| ||| ||||| || |||||||||||| || |||||||||||| |
|
|
| T |
47416582 |
gtagcttagtggttagaattcacctttttcaaagtgaataagtggggtgtccgagattcgaa |
47416521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 8965224 - 8965196
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
8965224 |
ttttttggtcaagtagcctagtggttaga |
8965196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 21023337 - 21023377
Alignment:
| Q |
49 |
cctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
21023337 |
cctagtggttagaattcacctttttcaaggtgaataagtgg |
21023377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 30057352 - 30057324
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
30057352 |
ttttttggtcaagtagcctagtggttaga |
30057324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 36132359 - 36132331
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
36132359 |
ttttttggtcaagtagcctagtggttaga |
36132331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 49280640 - 49280693
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| || ||||||||||||||| |
|
|
| T |
49280640 |
tttttttgtcaagtagcctagtggttagaattcac--cttataaggtgaataagtg |
49280693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 41000879 - 41000809
Alignment:
| Q |
40 |
gtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaatctc |
110 |
Q |
| |
|
||||||||| || ||||||||||| ||||||||||||||||||||||||| ||| || |||||||||||| |
|
|
| T |
41000879 |
gtcaagtagtctggtggttagaattcacattttttaaggtgaataagtgggatgttcgggattcgaatctc |
41000809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 3766949 - 3766913
Alignment:
| Q |
25 |
tttatttattttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3766949 |
tttatttattttttggtcaagtagcctagtggttaga |
3766913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 10958159 - 10958103
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||||| ||||||||||||| |||||| ||| |||||| |||||||||||||| |
|
|
| T |
10958159 |
ttttttggtctagtagcctagtggctagaattcaccttttttgaggtgaataagtgg |
10958103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 44409326 - 44409270
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| |||||||| ||||||||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
44409326 |
tttttttgtcaagtaacctagtggttagaattcacctttttcaaggtgaataagtgg |
44409270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 1649287 - 1649222
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||| ||| |||||||||||| ||||||||||| |||||| ||| |||| ||||||||||||||| |
|
|
| T |
1649287 |
tttttttttttttttggtcaaatagcctagtggctagaattcaccattttcaaggtgaataagtgg |
1649222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 32309125 - 32309190
Alignment:
| Q |
41 |
tcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
|||||||| ||||||| |||||| ||||||||||||||||||||| ||| || | |||||||||| |
|
|
| T |
32309125 |
tcaagtagtctagtggctagaattcacattttttaaggtgaataactggggtgtctgagattcgaa |
32309190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 32814961 - 32814880
Alignment:
| Q |
25 |
tttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| ||| ||| |||||| | ||||||||||| || ||| |||||||| |
|
|
| T |
32814961 |
tttatttattttttggtcaagtagtccagtggttaaaattcacctttttttatatgaataagtggggtgtccgggattcgaa |
32814880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 48053284 - 48053235
Alignment:
| Q |
25 |
tttatttattttttggtcaagtagcctagtggttagaatacacatttttt |
74 |
Q |
| |
|
|||||||||||||| ||||||| || ||||||||||||| |||||||||| |
|
|
| T |
48053284 |
tttatttatttttttgtcaagttgcttagtggttagaattcacatttttt |
48053235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 5773257 - 5773201
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| ||||||| ||||||||| |||||| ||| ||||| ||||||||||||||| |
|
|
| T |
5773257 |
tttttttgtcaagtcgcctagtgggtagaatccacctttttcaaggtgaataagtgg |
5773201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 29658234 - 29658297
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||| |||||| ||| || |||||||||||||||| |
|
|
| T |
29658234 |
tttttttttttttttggtcaagtagcctagtggctagaattcac--cttataaggtgaataagtgg |
29658297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 36315934 - 36316016
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
|||| ||| ||||| ||||||||||| |||| |||||||| ||| || | |||||||||||||||| || ||||| |||||| |
|
|
| T |
36315934 |
ttttttttttttttaggtcaagtagcttagttgttagaattcactttatataaggtgaataagtggggtgtccgaggttcgaa |
36316016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 3481140 - 3481193
Alignment:
| Q |
35 |
ttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
||||| |||||||| ||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
3481140 |
ttttgatcaagtagtttagtggttagaattcaccatttttaaggtgaataagtg |
3481193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 11808165 - 11808108
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttt-taaggtgaataagtgg |
89 |
Q |
| |
|
|||||| ||||||||| ||||| |||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
11808165 |
tttttttgtcaagtagtctagttgttagaattcacgtttttctaaggtgaataagtgg |
11808108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 25711101 - 25711173
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
|||||||||||| ||||||||||| |||||| |||| ||| ||| |||||||||||| || ||||| |||||| |
|
|
| T |
25711101 |
ttttttggtcaaatagcctagtggatagaattcaca-tttataaagtgaataagtggggtgtccgaggttcgaa |
25711173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 26734232 - 26734296
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||| ||||||| ||| ||||||||||| |||||| ||| ||||| ||||||||||||||| |
|
|
| T |
26734232 |
ttttattttttttttg-tcagatagcctagtggctagaattcacctttttcaaggtgaataagtgg |
26734296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 28555820 - 28555877
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgga |
90 |
Q |
| |
|
|||||| ||||| ||||||| | |||||||| || |||||||||||||||||||||| |
|
|
| T |
28555820 |
tttttttgtcaaatagcctaatagttagaatttaccttttttaaggtgaataagtgga |
28555877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 42976569 - 42976626
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgga |
90 |
Q |
| |
|
|||||| ||||||||| ||||| | |||||| ||| |||||||| ||||||||||||| |
|
|
| T |
42976569 |
tttttttgtcaagtagtctagtaggtagaattcaccttttttaaagtgaataagtgga |
42976626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 7162644 - 7162696
Alignment:
| Q |
40 |
gtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaat |
92 |
Q |
| |
|
||||| ||||||||| |||||||| ||| ||||| ||| |||||||||||||| |
|
|
| T |
7162644 |
gtcaaatagcctagtagttagaattcacctttttcaagatgaataagtggaat |
7162696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 10020438 - 10020494
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| ||||||||| ||||||| |||||| ||| ||||| ||| ||||||||||| |
|
|
| T |
10020438 |
tttttttgtcaagtaggctagtgggtagaattcacctttttcaagatgaataagtgg |
10020494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 17900848 - 17900880
Alignment:
| Q |
31 |
tattttttggtcaagtagcctagtggttagaat |
63 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |
|
|
| T |
17900848 |
tattttttggtcaagtagcctagtggctagaat |
17900880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 220331 - 220404
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||||| || ||| |||||||| |
|
|
| T |
220331 |
ttttttggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaa |
220404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 689486 - 689559
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||||| || ||| |||||||| |
|
|
| T |
689486 |
ttttttggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaa |
689559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 733954 - 734027
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||||| || ||| |||||||| |
|
|
| T |
733954 |
ttttttggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaa |
734027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 857850 - 857923
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||||| || ||| |||||||| |
|
|
| T |
857850 |
ttttttggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaa |
857923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 14011020 - 14011080
Alignment:
| Q |
46 |
tagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||||||||| ||| ||||| |||||| |
|
|
| T |
14011020 |
tagcctagtggttagaattcacattttttaagatgaataagtgggatgtccgaggttcgaa |
14011080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 16808325 - 16808385
Alignment:
| Q |
29 |
tttattttttggtcaagtagcctagtggttagaatacac-attttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
16808325 |
tttattttttg-tcaagcagcctagtggttagaattcacttttttttaaggtgaataagtgg |
16808385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 43085154 - 43085191
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
43085154 |
ttttttttattttttggtcaagtagcctagtggttaga |
43085191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 29653187 - 29653123
Alignment:
| Q |
27 |
tatttattttttggtcaagtagcctagtggttagaataca-cattttttaaggtgaataagtgga |
90 |
Q |
| |
|
||||||||||||||||||| || |||||| |||||| || | |||||||||||||||||||||| |
|
|
| T |
29653187 |
tatttattttttggtcaagcagtttagtggctagaattcacctttttttaaggtgaataagtgga |
29653123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 39208838 - 39208893
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
|||||| ||||||||| ||||||| |||||| ||| ||||| |||||||||||||| |
|
|
| T |
39208838 |
tttttttgtcaagtagtctagtggctagaattcacctttttaaaggtgaataagtg |
39208893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 22438548 - 22438610
Alignment:
| Q |
28 |
atttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgga |
90 |
Q |
| |
|
|||| ||||| ||| ||||| |||||| ||||||| ||| |||||||||||||||||||||| |
|
|
| T |
22438548 |
atttttttttgggtaaagtaatctagtgattagaattcaccttttttaaggtgaataagtgga |
22438610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 11876025 - 11875988
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
11876025 |
tttttttttttttttggtcaagtagcctagtggttaga |
11875988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 11891032 - 11890995
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
11891032 |
tttttttttttttttggtcaagtagcctagtggttaga |
11890995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 26773694 - 26773731
Alignment:
| Q |
56 |
gttagaatacacattttttaaggtgaataagtggaatg |
93 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
26773694 |
gttagaattcacattttttaagatgaataagtggaatg |
26773731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 4604339 - 4604379
Alignment:
| Q |
50 |
ctagtggttagaatacacattttttaaggtgaataagtgga |
90 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
4604339 |
ctagtggttagaattcatcttttttaaggtgaataagtgga |
4604379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 18123987 - 18123931
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||||||||| |||| || |||||| ||| |||||||||| |||||||||| |
|
|
| T |
18123987 |
ttttttggtcaagtaatctagcggctagaattcaccttttttaaggagaataagtgg |
18123931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 29514764 - 29514728
Alignment:
| Q |
25 |
tttatttattttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
29514764 |
tttatttatttttttgtcaagtagcctagtggctaga |
29514728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 34413192 - 34413164
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
34413192 |
ttttttggtcaagtagcctagtggttaga |
34413164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 35818189 - 35818161
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
35818189 |
ttttttggtcaagtagcctagtggttaga |
35818161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 3535896 - 3535961
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||| ||| |||||| |||| ||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
3535896 |
ttttttttttttttttgtcaggtagcctagtggttagaattcactttttttaaggtgaataagtgg |
3535961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 17137848 - 17137893
Alignment:
| Q |
45 |
gtagcctagtggttagaatacacattttttaaggtgaataagtgga |
90 |
Q |
| |
|
||||||||||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
17137848 |
gtagcctagtggttagaattcacgtttttcaaggtgaataagtgga |
17137893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 18536038 - 18535985
Alignment:
| Q |
35 |
ttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
|||||||||||||| ||||||||||||| ||| ||||| |||||||||||||| |
|
|
| T |
18536038 |
ttttggtcaagtagtttagtggttagaattcacttttttcaaggtgaataagtg |
18535985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 34325391 - 34325318
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
|||||| |||||||||| |||||| |||||| || ||||||||||||||||||| | ||| ||||||||||| |
|
|
| T |
34325391 |
tttttttgtcaagtagcttagtggctagaattcattttttttaaggtgaataagttggatgttcgagattcgaa |
34325318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 8934907 - 8934851
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||||||||||| ||| |||||||||| || ||||| ||||||||||||||| |
|
|
| T |
8934907 |
ttttttggtcaagtagtctaatggttagaatttacctttttaaaggtgaataagtgg |
8934851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 37986844 - 37986892
Alignment:
| Q |
41 |
tcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||||||||||| |||||| ||| ||||| ||||||||||||||| |
|
|
| T |
37986844 |
tcaagtagcctagtggctagaattcacctttttcaaggtgaataagtgg |
37986892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 36116850 - 36116904
Alignment:
| Q |
34 |
tttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||||||||||||||| | |||||| ||||||||| ||| ||||||||||| |
|
|
| T |
36116850 |
tttttggtcaagtagcctagt-gctagaattcacatttttgaagatgaataagtgg |
36116904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 39684347 - 39684308
Alignment:
| Q |
50 |
ctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
39684347 |
ctagtggttagaattcaccttttttaaggtgaataagtgg |
39684308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 20186983 - 20186934
Alignment:
| Q |
40 |
gtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||| |||||||||| ||| ||| ||||| ||||||||||||||| |
|
|
| T |
20186983 |
gtcaagtagtctagtggttataattcacttttttcaaggtgaataagtgg |
20186934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 27006466 - 27006409
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgga |
90 |
Q |
| |
|
|||||| ||||||||||||| || |||||| ||| ||||| |||||||||||||||| |
|
|
| T |
27006466 |
tttttttgtcaagtagcctaacggctagaattcacctttttcaaggtgaataagtgga |
27006409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 13862254 - 13862194
Alignment:
| Q |
29 |
tttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||| | | ||||| ||| |||||||||| |
|
|
| T |
13862254 |
tttatttttttgtcaggtagcctagtggttagaattctcctttttcaagaagaataagtgg |
13862194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 22569181 - 22569213
Alignment:
| Q |
29 |
tttattttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
22569181 |
tttattttttggtcaagtagcctagtggctaga |
22569213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 22687862 - 22687906
Alignment:
| Q |
45 |
gtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||| |||||||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
22687862 |
gtagtctagtggttagaattcacctttttcaaggtgaataagtgg |
22687906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 28537261 - 28537205
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| ||||||||||||||||| |||||| ||| |||| || |||||||||||| |
|
|
| T |
28537261 |
tttttttgtcaagtagcctagtggctagaattcaccattttcaaagtgaataagtgg |
28537205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 440525 - 440469
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| |||| ||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
440525 |
tttttttgtcaggtagcctagtggttagaattcaccttttttaaggtgaataagtgg |
440469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 26)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 38028663 - 38028607
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||| |
|
|
| T |
38028663 |
tttttttgtcaagtagcctagtagttagaattcacatttttcaaggtgaataagtgg |
38028607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 195175 - 195114
Alignment:
| Q |
28 |
atttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||| |||||| |||||||||| ||||||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
195175 |
atttttttttttgtcaagtagcttagtggttagaattcacctttttcaaggtgaataagtgg |
195114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 2643779 - 2643840
Alignment:
| Q |
28 |
atttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||| |||||| |||| |||| |||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
2643779 |
atttttttttttgtcaggtagtctagtggttagagttcacattttttaaggtgaataagtgg |
2643840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 3269753 - 3269712
Alignment:
| Q |
21 |
ttattttatttattttttggtcaagtagcctagtggttagaa |
62 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
3269753 |
ttattttattttttttttggtcaagtagcctagtggctagaa |
3269712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 9768769 - 9768834
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||| ||| ||||||||||| |||||||||| | |||||| ||| ||||| ||||||||||||||| |
|
|
| T |
9768769 |
tttttttttttttttggtcaggtagcctagtagctagaattcacctttttcaaggtgaataagtgg |
9768834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 9931222 - 9931157
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||| ||| |||||| ||||||||| ||||| |||||||| ||| || |||||||||||||||||| |
|
|
| T |
9931222 |
ttttttttttttttttgtcaagtagtctagtagttagaattcaccttctttaaggtgaataagtgg |
9931157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 3341705 - 3341761
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||||| | |||||||||| |||||| ||| ||||| ||||||||||||||| |
|
|
| T |
3341705 |
ttttttggtcaggcagcctagtggctagaattcacctttttcaaggtgaataagtgg |
3341761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 9769549 - 9769605
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| |||| ||||| ||||||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
9769549 |
tttttttgtcaggtagcttagtggttagaattcacctttttcaaggtgaataagtgg |
9769605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 12553320 - 12553264
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||||| |||||||||||| |||||| ||| ||||| || |||||||||||| |
|
|
| T |
12553320 |
ttttttggtcaggtagcctagtggctagaattcacctttttcaaagtgaataagtgg |
12553264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 19866601 - 19866545
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| ||||||||| |||||| |||||| ||| ||||||||||||||||||||| |
|
|
| T |
19866601 |
tttttttgtcaagtagtttagtggctagaattcaccttttttaaggtgaataagtgg |
19866545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 23758221 - 23758273
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataa |
85 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| |||| |||||||| ||||||| |
|
|
| T |
23758221 |
tttttttgtcaagtagtctagtggttagaattcacaatttttaagatgaataa |
23758273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 33033264 - 33033228
Alignment:
| Q |
25 |
tttatttattttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| |
|
|
| T |
33033264 |
tttatttattttttggtcaagtagtctagtggttaga |
33033228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 48260158 - 48260214
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| |||||| |||||| ||| |||||| ||||||||| ||||||||||||||| |
|
|
| T |
48260158 |
tttttttgtcaaggagcctaatggctagaattcacatttttcaaggtgaataagtgg |
48260214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 50147650 - 50147598
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataa |
85 |
Q |
| |
|
|||||| ||||||||| ||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
50147650 |
tttttttgtcaagtagtttagtggttagaattcactttttttaaggtgaataa |
50147598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 1721266 - 1721211
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
|||||| ||||||||||||| || |||||| ||| |||||||||||||||||||| |
|
|
| T |
1721266 |
tttttttgtcaagtagcctaacggctagaattcaccttttttaaggtgaataagtg |
1721211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 2902997 - 2903052
Alignment:
| Q |
34 |
tttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||||||||| |||||||| |||||| | | ||||| ||||||||||||||| |
|
|
| T |
2902997 |
tttttggtcaagtaacctagtggctagaattctcctttttcaaggtgaataagtgg |
2903052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 3261963 - 3261924
Alignment:
| Q |
54 |
tggttagaatacacattttttaaggtgaataagtggaatg |
93 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
3261963 |
tggttagaattcacatttttcaaggtgaataagtggaatg |
3261924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 4069581 - 4069636
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgga |
90 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||| | |||||||||||||||||| |
|
|
| T |
4069581 |
ttttttggtcaagtagcctagtgggtagaattcac--ctcttaaggtgaataagtgga |
4069636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 4511512 - 4511550
Alignment:
| Q |
51 |
tagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
4511512 |
tagtggttagaattcaccttttttaaggtgaataagtgg |
4511550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 7906294 - 7906348
Alignment:
| Q |
33 |
ttttttggt-caagtagcctagtggttagaatacacattttttaaggtgaataag |
86 |
Q |
| |
|
||||||||| |||||| |||||||| |||||| ||||||||||||||| |||||| |
|
|
| T |
7906294 |
ttttttggttcaagtaccctagtggctagaattcacattttttaaggtcaataag |
7906348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 9163415 - 9163354
Alignment:
| Q |
26 |
ttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
|||| ||||||||||||| |||| ||||||| |||||| |||| |||||||| |||||||||| |
|
|
| T |
9163415 |
ttatatattttttggtcaggtagtctagtggctagaattcaca-tttttaagatgaataagtg |
9163354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 13941446 - 13941389
Alignment:
| Q |
32 |
attttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||| ||||||||| ||||||||||||| ||| ||||| ||| ||||||||||| |
|
|
| T |
13941446 |
atttttttgtcaagtagtttagtggttagaattcacttttttcaagatgaataagtgg |
13941389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 23973458 - 23973507
Alignment:
| Q |
40 |
gtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||| ||||||| |||||| ||||||||| || |||||||||||| |
|
|
| T |
23973458 |
gtcaagtagtctagtggctagaattcacatttttcaacgtgaataagtgg |
23973507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 23750264 - 23750220
Alignment:
| Q |
45 |
gtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||||||||||||| ||| ||||| ||| ||||||||||| |
|
|
| T |
23750264 |
gtagcctagtggttagaattcacctttttcaagatgaataagtgg |
23750220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 41677174 - 41677130
Alignment:
| Q |
45 |
gtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||||||| |||||| ||| ||||| ||||||||||||||| |
|
|
| T |
41677174 |
gtagcctagtggctagaattcacctttttcaaggtgaataagtgg |
41677130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 48497170 - 48497210
Alignment:
| Q |
21 |
ttattttatttattttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
48497170 |
ttattttattttatttttggtcaagtagcctagtggctaga |
48497210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 19)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 28951997 - 28951936
Alignment:
| Q |
28 |
atttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||| ||||||||||||||| | || |||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
28951997 |
attttttttttggtcaagtaacttaatggttagaattcacatttttcaaggtgaataagtgg |
28951936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 33533328 - 33533273
Alignment:
| Q |
34 |
tttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||| ||||||||| ||||| |||||||| ||| ||||||||||||||||||||| |
|
|
| T |
33533328 |
ttttttgtcaagtagtctagttgttagaattcactttttttaaggtgaataagtgg |
33533273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 43911732 - 43911675
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgga |
90 |
Q |
| |
|
|||||| ||||||||||||||||| | ||| ||||||||| |||||||||||||||| |
|
|
| T |
43911732 |
tttttttgtcaagtagcctagtggcaataattcacatttttcaaggtgaataagtgga |
43911675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 44764501 - 44764538
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
44764501 |
ttttatttattttttggtcaagtagcctagtggctaga |
44764538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 4009987 - 4010039
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataa |
85 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||| ||||||||||| |
|
|
| T |
4009987 |
ttttttggtcaagtagcctagtggttagaattcaacattttcaaggtgaataa |
4010039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 6054185 - 6054249
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
|||| ||| |||||| ||||| ||| |||||||||||||| ||| ||||| |||||||||||||| |
|
|
| T |
6054185 |
ttttttttttttttttgtcaaatagtctagtggttagaattcacctttttcaaggtgaataagtg |
6054249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 40160853 - 40160805
Alignment:
| Q |
41 |
tcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||||||||||| |||||| ||| ||||| ||||||||||||||| |
|
|
| T |
40160853 |
tcaagtagcctagtggctagaattcacctttttaaaggtgaataagtgg |
40160805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 46798712 - 46798680
Alignment:
| Q |
29 |
tttattttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
46798712 |
tttattttttggtcaagtagcctagtggttaga |
46798680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 50724501 - 50724420
Alignment:
| Q |
23 |
attttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
|||||| || |||||| |||| |||||||||||| |||||| ||| |||||||||||||||||||| || ||||| |||||| |
|
|
| T |
50724501 |
attttacttttttttttgtcaggtagcctagtggctagaattcac--tttttaaggtgaataagtggggtgtccgaggttcgaa |
50724420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 3993676 - 3993706
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaat |
63 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
3993676 |
ttttttggtcaagtagcctagtggttagaat |
3993706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 50788357 - 50788428
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtggaatgcccgagattcgaa |
106 |
Q |
| |
|
|||||| |||| |||||||||||| |||||| ||| |||||||||||||||||||| || ||||| |||||| |
|
|
| T |
50788357 |
tttttttgtcaggtagcctagtggctagaattcac--tttttaaggtgaataagtggggtgtccgaggttcgaa |
50788428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 8724889 - 8724841
Alignment:
| Q |
41 |
tcaagtagcctagtggttagaatacacattttttaaggtgaataagtgga |
90 |
Q |
| |
|
|||||||| ||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
8724889 |
tcaagtagtctagtggttagaa-attcattttttaaggtgaataagtgga |
8724841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 9076776 - 9076728
Alignment:
| Q |
41 |
tcaagtagcctagtggttagaatacacattttttaaggtgaataagtgga |
90 |
Q |
| |
|
|||||||| ||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
9076776 |
tcaagtagtctagtggttagaa-attcattttttaaggtgaataagtgga |
9076728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 28206500 - 28206562
Alignment:
| Q |
25 |
tttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||||| ||| ||| ||||||||||||||||||| ||| || |||||||||||||||| |
|
|
| T |
28206500 |
tttatttatttattgatcaggtagcctagtggttagaattcac--cttataaggtgaataagtgg |
28206562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 16141322 - 16141350
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
16141322 |
ttttttggtcaagtagcctagtggttaga |
16141350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 32429877 - 32429849
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
32429877 |
ttttttggtcaagtagcctagtggttaga |
32429849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 36842292 - 36842232
Alignment:
| Q |
29 |
tttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||||| ||||| ||| ||||||||||||| ||| ||||| || |||||||||||| |
|
|
| T |
36842292 |
tttatttttttgtcaaatagattagtggttagaattcacttttttcaaagtgaataagtgg |
36842232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 40956656 - 40956708
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataa |
85 |
Q |
| |
|
|||||| ||||||||| ||||||||||||| ||| ||||||||| ||||||| |
|
|
| T |
40956656 |
tttttttgtcaagtagtttagtggttagaattcaccttttttaagctgaataa |
40956708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 47497196 - 47497148
Alignment:
| Q |
41 |
tcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||||| ||||||||| ||| ||| ||||||||||||||||||||| |
|
|
| T |
47497196 |
tcaagtagtttagtggttaaaattcaccttttttaaggtgaataagtgg |
47497148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 20)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 15963875 - 15963912
Alignment:
| Q |
25 |
tttatttattttttggtcaagtagcctagtggttagaa |
62 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
15963875 |
tttatttattttttggtcaagtagcctagtggctagaa |
15963912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 4844262 - 4844214
Alignment:
| Q |
40 |
gtcaagtagcctagtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
||||||||| |||||||||||||| ||| ||||| |||||||||||||| |
|
|
| T |
4844262 |
gtcaagtagtctagtggttagaattcacttttttcaaggtgaataagtg |
4844214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 17305642 - 17305587
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||||||||||| ||||| ||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
17305642 |
ttttttggtcaagtagcttagtgattagaattcac-tttttcaaggtgaataagtgg |
17305587 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 3243942 - 3243887
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtg |
88 |
Q |
| |
|
|||||| |||| |||| ||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
3243942 |
tttttttgtcaggtagtttagtggttagaattcaccttttttaaggtgaataagtg |
3243887 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 3037560 - 3037614
Alignment:
| Q |
35 |
ttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||| ||| |||||| ||||||||||||| ||| ||||||||| ||||||||||| |
|
|
| T |
3037560 |
ttttagtcgagtagcttagtggttagaattcaccttttttaagatgaataagtgg |
3037614 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 25045875 - 25045841
Alignment:
| Q |
28 |
atttattttttggtcaagtagcctagtggttagaa |
62 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
25045875 |
attttttttttggtcaagtagcctagtggttagaa |
25045841 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 978064 - 978105
Alignment:
| Q |
21 |
ttattttatttattttttggtcaagtagcctagtggttagaa |
62 |
Q |
| |
|
||||||| ||| ||||||||||||||||| |||||||||||| |
|
|
| T |
978064 |
ttatttttttttttttttggtcaagtagcttagtggttagaa |
978105 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 13732950 - 13732913
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
13732950 |
tttttttttttttttggtcaagtagcctagtggttaga |
13732913 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 16119405 - 16119352
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacatttttt-aaggtgaataa |
85 |
Q |
| |
|
|||||| ||||||||| ||||||| |||||| |||||||||| ||||||||||| |
|
|
| T |
16119405 |
tttttttgtcaagtagtctagtggctagaattcacatttttttaaggtgaataa |
16119352 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 26669619 - 26669684
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||| ||| |||||| ||||||||| |||||| |||||| ||| ||||| ||||||||||||||| |
|
|
| T |
26669619 |
ttttttttttttttttgtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtgg |
26669684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 9888465 - 9888493
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
9888465 |
ttttttggtcaagtagcctagtggttaga |
9888493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 12291296 - 12291244
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataa |
85 |
Q |
| |
|
|||||| || |||||||||||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
12291296 |
tttttttgttaagtagcctagtggttagaatacatctttttcaagctgaataa |
12291244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 14948988 - 14949040
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataa |
85 |
Q |
| |
|
|||||||||||| ||||||||||| || ||| ||| ||||| ||||||||||| |
|
|
| T |
14948988 |
ttttttggtcaaatagcctagtggctataattcacctttttcaaggtgaataa |
14949040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 16913841 - 16913869
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
16913841 |
ttttttggtcaagtagcctagtggttaga |
16913869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 17347380 - 17347324
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| |||| |||| ||| |||||||||| || ||||||||||||||||||||| |
|
|
| T |
17347380 |
tttttttgtcaggtagtctaatggttagaatttaccttttttaaggtgaataagtgg |
17347324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 20149948 - 20150004
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| ||||||||| ||||| | |||||| ||| ||||| ||||||||||||||| |
|
|
| T |
20149948 |
tttttttgtcaagtaggctagtagatagaattcacctttttcaaggtgaataagtgg |
20150004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 22182884 - 22182828
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| ||||||||| ||||| | |||||| ||| ||||| ||||||||||||||| |
|
|
| T |
22182884 |
tttttttgtcaagtaggctagtagatagaattcacctttttcaaggtgaataagtgg |
22182828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 28222992 - 28222964
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
28222992 |
ttttttggtcaagtagcctagtggttaga |
28222964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 29204858 - 29204894
Alignment:
| Q |
53 |
gtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
29204858 |
gtggttagaattcactttttttaaggtgaataagtgg |
29204894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 30668153 - 30668209
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||||| | ||||||| |||||| || ||| ||||||||||||||||||||||||| |
|
|
| T |
30668153 |
tttttttgacaagtagtctagtgactataattcacattttttaaggtgaataagtgg |
30668209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0366 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0366
Description:
Target: scaffold0366; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 792 - 828
Alignment:
| Q |
25 |
tttatttattttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |
|
|
| T |
792 |
tttatttattttttggtcaagtagcctagtggctaga |
828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0118 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0118
Description:
Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 37302 - 37353
Alignment:
| Q |
38 |
tggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
||||||| ||||||||||| || | | ||||||||||||||||||||||||| |
|
|
| T |
37302 |
tggtcaaatagcctagtggctaaatttcacattttttaaggtgaataagtgg |
37353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0119 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0119
Description:
Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 1174 - 1109
Alignment:
| Q |
24 |
ttttatttattttttggtcaagtagcctagtggttagaatacacattttttaaggtgaataagtgg |
89 |
Q |
| |
|
|||| ||| |||||| ||||||||| |||||| |||||| ||| ||||| ||||||||||||||| |
|
|
| T |
1174 |
ttttttttttttttttgtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtgg |
1109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 23490 - 23462
Alignment:
| Q |
33 |
ttttttggtcaagtagcctagtggttaga |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
23490 |
ttttttggtcaagtagcctagtggttaga |
23462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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