View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18346_low_18 (Length: 247)

Name: NF18346_low_18
Description: NF18346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18346_low_18
NF18346_low_18
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-106)||(38581-38686)
[»] chr8 (35 HSPs)
chr8 (1-106)||(24501788-24501893)
chr8 (1-106)||(2704794-2704899)
chr8 (1-106)||(7506874-7506979)
chr8 (1-106)||(26374405-26374510)
chr8 (1-103)||(42938095-42938197)
chr8 (1-106)||(5576595-5576700)
chr8 (1-106)||(42735252-42735357)
chr8 (1-106)||(42937477-42937582)
chr8 (9-106)||(41479221-41479318)
chr8 (1-102)||(10392217-10392317)
chr8 (1-99)||(23115152-23115249)
chr8 (9-106)||(43959781-43959878)
chr8 (1-96)||(4403233-4403326)
chr8 (1-103)||(4949995-4950096)
chr8 (1-75)||(14782141-14782215)
chr8 (1-75)||(44725816-44725890)
chr8 (1-96)||(9288444-9288537)
chr8 (7-96)||(7466457-7466544)
chr8 (1-87)||(43166684-43166770)
chr8 (1-89)||(10295372-10295461)
chr8 (2-106)||(39189793-39189894)
chr8 (7-75)||(18305977-18306045)
chr8 (1-75)||(19717887-19717961)
chr8 (7-96)||(32497647-32497734)
chr8 (1-96)||(26856193-26856286)
chr8 (1-96)||(39467455-39467548)
chr8 (1-72)||(18958736-18958807)
chr8 (18-87)||(9770434-9770503)
chr8 (24-70)||(32711305-32711351)
chr8 (7-96)||(37857241-37857328)
chr8 (18-75)||(42305801-42305858)
chr8 (18-96)||(31623818-31623894)
chr8 (2-61)||(8410416-8410477)
chr8 (7-96)||(16362318-16362405)
chr8 (18-62)||(4031297-4031341)
[»] chr7 (52 HSPs)
chr7 (1-106)||(18914710-18914815)
chr7 (1-106)||(34695400-34695505)
chr7 (1-103)||(7719238-7719340)
chr7 (1-106)||(973311-973416)
chr7 (1-106)||(39219352-39219457)
chr7 (1-106)||(40996624-40996729)
chr7 (1-106)||(43581065-43581170)
chr7 (1-106)||(47914393-47914498)
chr7 (1-103)||(44343374-44343476)
chr7 (1-106)||(30440923-30441028)
chr7 (1-106)||(47879295-47879400)
chr7 (1-99)||(7718345-7718442)
chr7 (1-103)||(32142895-32142997)
chr7 (1-103)||(12893535-12893639)
chr7 (1-106)||(20275238-20275343)
chr7 (1-106)||(7113579-7113684)
chr7 (1-106)||(34009140-34009245)
chr7 (1-105)||(10068587-10068689)
chr7 (7-87)||(9179996-9180076)
chr7 (1-106)||(43187334-43187437)
chr7 (1-75)||(23101418-23101492)
chr7 (1-75)||(28342467-28342541)
chr7 (1-75)||(29614770-29614844)
chr7 (1-75)||(39784219-39784293)
chr7 (1-96)||(3023046-3023139)
chr7 (1-96)||(18838509-18838602)
chr7 (7-75)||(19810915-19810983)
chr7 (1-95)||(28034793-28034885)
chr7 (9-63)||(727638-727692)
chr7 (16-101)||(3797049-3797131)
chr7 (1-101)||(33382757-33382855)
chr7 (1-96)||(7993262-7993355)
chr7 (1-96)||(8675453-8675546)
chr7 (1-96)||(37972854-37972947)
chr7 (1-96)||(41827424-41827517)
chr7 (1-52)||(43679541-43679592)
chr7 (1-82)||(12740492-12740573)
chr7 (1-96)||(9882224-9882316)
chr7 (55-106)||(31639031-31639082)
chr7 (11-104)||(1470213-1470304)
chr7 (1-106)||(12963821-12963919)
chr7 (7-81)||(19251655-19251729)
chr7 (7-96)||(40460704-40460791)
chr7 (7-75)||(509772-509840)
chr7 (4-51)||(25805815-25805862)
chr7 (1-105)||(10617038-10617141)
chr7 (7-96)||(29585630-29585717)
chr7 (7-96)||(44121897-44121984)
chr7 (10-72)||(44623295-44623357)
chr7 (18-75)||(17001049-17001106)
chr7 (18-75)||(47066821-47066878)
chr7 (20-72)||(33892269-33892321)
[»] chr6 (19 HSPs)
chr6 (1-106)||(6197453-6197558)
chr6 (1-106)||(2300714-2300818)
chr6 (1-106)||(1391749-1391854)
chr6 (1-106)||(28002790-28002895)
chr6 (1-89)||(29076724-29076812)
chr6 (1-89)||(29111698-29111786)
chr6 (1-75)||(31895821-31895895)
chr6 (1-87)||(7051970-7052056)
chr6 (1-96)||(14262420-14262513)
chr6 (1-75)||(34759056-34759130)
chr6 (1-75)||(34773534-34773608)
chr6 (1-75)||(7497201-7497274)
chr6 (41-105)||(2238676-2238741)
chr6 (7-75)||(31067614-31067682)
chr6 (7-75)||(4200443-4200511)
chr6 (7-96)||(30385056-30385141)
chr6 (54-106)||(657114-657165)
chr6 (41-81)||(11113733-11113773)
chr6 (4-47)||(657082-657122)
[»] chr4 (62 HSPs)
chr4 (1-106)||(25331256-25331361)
chr4 (1-106)||(30009653-30009758)
chr4 (1-106)||(34228559-34228664)
chr4 (9-105)||(31314719-31314815)
chr4 (1-105)||(39479332-39479436)
chr4 (1-106)||(41881056-41881163)
chr4 (1-104)||(1044932-1045035)
chr4 (1-106)||(22202140-22202245)
chr4 (1-106)||(42786809-42786913)
chr4 (1-106)||(24130957-24131063)
chr4 (1-104)||(41320935-41321038)
chr4 (1-106)||(12113070-12113176)
chr4 (1-106)||(3436718-3436823)
chr4 (9-106)||(46635624-46635721)
chr4 (1-106)||(55302968-55303077)
chr4 (1-92)||(1113018-1113109)
chr4 (1-106)||(37046425-37046532)
chr4 (1-106)||(32950811-32950917)
chr4 (1-106)||(7007499-7007605)
chr4 (1-106)||(8711991-8712094)
chr4 (1-102)||(39307234-39307334)
chr4 (9-106)||(40537136-40537233)
chr4 (1-99)||(27454061-27454159)
chr4 (7-106)||(11090435-11090532)
chr4 (1-75)||(24736460-24736534)
chr4 (1-106)||(53275964-53276069)
chr4 (1-75)||(5441529-5441603)
chr4 (1-75)||(27768181-27768255)
chr4 (1-75)||(54341269-54341343)
chr4 (7-75)||(12913345-12913413)
chr4 (1-61)||(19740929-19740989)
chr4 (1-96)||(54853456-54853549)
chr4 (1-75)||(37828409-37828483)
chr4 (1-75)||(48261252-48261326)
chr4 (1-73)||(44770862-44770934)
chr4 (7-75)||(56445362-56445430)
chr4 (1-52)||(7249795-7249846)
chr4 (1-75)||(41725247-41725321)
chr4 (1-102)||(9163201-9163292)
chr4 (1-53)||(25446175-25446227)
chr4 (1-96)||(32322216-32322309)
chr4 (1-96)||(51321046-51321139)
chr4 (1-52)||(28541823-28541874)
chr4 (10-76)||(41581795-41581862)
chr4 (7-89)||(30967302-30967384)
chr4 (9-96)||(23987337-23987422)
chr4 (1-96)||(37915952-37916045)
chr4 (7-105)||(36479221-36479316)
chr4 (18-96)||(32683996-32684072)
chr4 (7-81)||(28484020-28484093)
chr4 (8-89)||(36727943-36728023)
chr4 (7-96)||(49501507-49501596)
chr4 (7-96)||(49507572-49507661)
chr4 (2-38)||(23465081-23465117)
chr4 (1-104)||(13400785-13400887)
chr4 (7-96)||(5800099-5800186)
chr4 (72-106)||(25446224-25446258)
chr4 (18-72)||(50018383-50018437)
chr4 (1-38)||(28371049-28371086)
chr4 (56-105)||(49469411-49469459)
chr4 (18-75)||(49834840-49834897)
chr4 (41-74)||(55047641-55047674)
[»] chr3 (57 HSPs)
chr3 (1-106)||(996062-996167)
chr3 (1-106)||(10139122-10139227)
chr3 (1-106)||(20498334-20498439)
chr3 (1-106)||(6131210-6131314)
chr3 (1-106)||(19253952-19254057)
chr3 (1-106)||(6589689-6589795)
chr3 (1-106)||(3206181-3206286)
chr3 (1-103)||(3999624-3999726)
chr3 (1-106)||(37820453-37820558)
chr3 (1-106)||(29448833-29448939)
chr3 (1-106)||(25418491-25418595)
chr3 (1-106)||(35337860-35337963)
chr3 (1-106)||(40246969-40247073)
chr3 (1-102)||(54625717-54625818)
chr3 (1-82)||(33807798-33807879)
chr3 (1-106)||(53929104-53929209)
chr3 (1-106)||(6035031-6035134)
chr3 (1-106)||(44762011-44762118)
chr3 (1-106)||(52114654-52114759)
chr3 (1-106)||(1439869-1439975)
chr3 (9-105)||(27899467-27899560)
chr3 (1-88)||(5825187-5825274)
chr3 (1-76)||(33996547-33996622)
chr3 (1-96)||(17946413-17946506)
chr3 (1-96)||(18749737-18749830)
chr3 (9-106)||(52080050-52080142)
chr3 (1-75)||(36674137-36674211)
chr3 (1-75)||(40897269-40897343)
chr3 (7-106)||(44276506-44276603)
chr3 (1-75)||(11431651-11431725)
chr3 (1-75)||(32580301-32580375)
chr3 (1-75)||(34484037-34484111)
chr3 (1-67)||(51699495-51699561)
chr3 (1-75)||(54628969-54629043)
chr3 (29-82)||(33807680-33807733)
chr3 (1-96)||(44906501-44906594)
chr3 (1-96)||(52810503-52810596)
chr3 (1-75)||(31646293-31646365)
chr3 (1-75)||(50903247-50903321)
chr3 (1-96)||(26107386-26107479)
chr3 (1-96)||(48379282-48379375)
chr3 (10-96)||(37454985-37455069)
chr3 (7-96)||(10728639-10728726)
chr3 (1-47)||(22057887-22057933)
chr3 (7-96)||(50762048-50762135)
chr3 (9-96)||(39842482-39842567)
chr3 (18-96)||(45862983-45863059)
chr3 (7-64)||(6975867-6975924)
chr3 (1-74)||(29030130-29030203)
chr3 (1-62)||(51737746-51737807)
chr3 (7-75)||(15492874-15492942)
chr3 (7-75)||(39038161-39038229)
chr3 (1-71)||(20833117-20833187)
chr3 (1-96)||(52617959-52618046)
chr3 (19-74)||(12103733-12103789)
chr3 (1-50)||(55235309-55235359)
chr3 (18-75)||(23753414-23753470)
[»] chr2 (29 HSPs)
chr2 (1-106)||(20605363-20605468)
chr2 (1-106)||(31170602-31170707)
chr2 (1-106)||(12407507-12407612)
chr2 (1-106)||(14198555-14198660)
chr2 (1-106)||(16269818-16269923)
chr2 (1-106)||(24776482-24776586)
chr2 (2-106)||(43847774-43847878)
chr2 (1-106)||(9120253-9120358)
chr2 (1-106)||(22551741-22551846)
chr2 (5-106)||(305443-305544)
chr2 (1-105)||(5093025-5093130)
chr2 (1-106)||(35317189-35317294)
chr2 (1-106)||(32125380-32125486)
chr2 (1-106)||(44765902-44765998)
chr2 (1-106)||(1789569-1789676)
chr2 (10-106)||(10125280-10125374)
chr2 (9-106)||(26601191-26601285)
chr2 (1-96)||(10657533-10657626)
chr2 (1-96)||(33135750-33135842)
chr2 (1-75)||(18177394-18177468)
chr2 (1-75)||(43078690-43078764)
chr2 (7-75)||(13833441-13833509)
chr2 (1-96)||(25288286-25288379)
chr2 (1-96)||(28844682-28844775)
chr2 (7-75)||(3463795-3463863)
chr2 (1-57)||(26788913-26788969)
chr2 (18-75)||(6224576-6224633)
chr2 (7-96)||(28740283-28740370)
chr2 (18-73)||(215249-215303)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-106)||(15009-15114)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-106)||(15652-15757)
[»] chr1 (40 HSPs)
chr1 (1-106)||(19451784-19451889)
chr1 (1-106)||(49198245-49198350)
chr1 (1-106)||(50192526-50192631)
chr1 (1-106)||(21222266-21222371)
chr1 (1-106)||(45759985-45760090)
chr1 (1-106)||(47780830-47780935)
chr1 (1-106)||(28824349-28824454)
chr1 (1-106)||(47654327-47654432)
chr1 (1-105)||(31572174-31572278)
chr1 (1-105)||(6304227-6304333)
chr1 (1-106)||(35679102-35679209)
chr1 (1-105)||(9577411-9577513)
chr1 (9-106)||(33025630-33025726)
chr1 (1-82)||(35279791-35279872)
chr1 (1-95)||(45536063-45536163)
chr1 (1-106)||(29556223-29556328)
chr1 (1-102)||(37014622-37014721)
chr1 (1-105)||(32588936-32589034)
chr1 (1-94)||(49418203-49418296)
chr1 (1-96)||(48177450-48177543)
chr1 (45-105)||(48524805-48524865)
chr1 (1-75)||(6312693-6312767)
chr1 (1-75)||(29396395-29396469)
chr1 (1-72)||(51701699-51701770)
chr1 (1-75)||(9322507-9322581)
chr1 (1-75)||(15835060-15835134)
chr1 (1-75)||(25612276-25612350)
chr1 (1-53)||(48524438-48524490)
chr1 (7-96)||(48668773-48668860)
chr1 (1-74)||(46328161-46328234)
chr1 (1-75)||(28387400-28387474)
chr1 (7-96)||(38536087-38536174)
chr1 (7-96)||(38558305-38558392)
chr1 (1-47)||(730268-730314)
chr1 (7-96)||(29219401-29219488)
chr1 (7-71)||(5495117-5495181)
chr1 (18-74)||(18798607-18798663)
chr1 (55-106)||(730307-730357)
chr1 (7-96)||(45272700-45272787)
chr1 (7-48)||(47784501-47784542)
[»] chr5 (24 HSPs)
chr5 (1-106)||(7016714-7016819)
chr5 (1-106)||(33656017-33656121)
chr5 (1-103)||(21147193-21147294)
chr5 (1-106)||(27458925-27459030)
chr5 (1-106)||(5272894-5272999)
chr5 (1-103)||(9689783-9689884)
chr5 (1-106)||(32157869-32157977)
chr5 (1-105)||(139399-139504)
chr5 (1-96)||(1152090-1152183)
chr5 (12-103)||(9220696-9220786)
chr5 (1-106)||(849273-849370)
chr5 (1-75)||(14000111-14000185)
chr5 (1-75)||(39852471-39852545)
chr5 (1-75)||(7947579-7947653)
chr5 (1-75)||(13926057-13926131)
chr5 (1-94)||(4550244-4550337)
chr5 (1-48)||(6460918-6460965)
chr5 (7-96)||(5949230-5949317)
chr5 (7-96)||(4240449-4240536)
chr5 (18-75)||(40013718-40013775)
chr5 (7-96)||(1461135-1461222)
chr5 (18-96)||(37014037-37014113)
chr5 (64-106)||(6460966-6461008)
chr5 (7-102)||(1511330-1511426)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-106)||(38872-38976)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-104)||(102221-102324)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-106)||(100337-100444)
[»] scaffold0276 (1 HSPs)
scaffold0276 (1-94)||(527-620)
[»] scaffold0347 (1 HSPs)
scaffold0347 (7-96)||(14892-14979)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-96)||(39605-39698)
[»] scaffold0543 (1 HSPs)
scaffold0543 (1-75)||(10686-10760)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-75)||(36914-36988)
[»] scaffold1504 (1 HSPs)
scaffold1504 (1-89)||(989-1077)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-96)||(58064-58157)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-62)||(3712-3773)
[»] scaffold0306 (1 HSPs)
scaffold0306 (7-96)||(14004-14091)
[»] scaffold0152 (2 HSPs)
scaffold0152 (7-96)||(21236-21323)
scaffold0152 (43-96)||(28510-28561)


Alignment Details
Target: scaffold0151 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 38686 - 38581
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38686 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 38587  T
Q  101 ttacta 106  Q
    ||||||    
T  38586 ttacta 38581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 24501893 - 24501788
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24501893 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 24501794  T
Q  101 ttacta 106  Q
    ||||||    
T  24501793 ttacta 24501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 2704899 - 2704794
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2704899 ttttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 2704800  T
Q  101 ttacta 106  Q
    ||||||    
T  2704799 ttacta 2704794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 7506979 - 7506874
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  7506979 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttcttaggattgtttttttcttttaagatt 7506880  T
Q  101 ttacta 106  Q
    ||||||    
T  7506879 ttacta 7506874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 26374510 - 26374405
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  26374510 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaaaatt 26374411  T
Q  101 ttacta 106  Q
    ||||||    
T  26374410 ttacta 26374405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 42938197 - 42938095
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42938197 ttttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 42938098  T
Q  101 tta 103  Q
    |||    
T  42938097 tta 42938095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 5576700 - 5576595
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||    
T  5576700 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttccttttaagatt 5576601  T
Q  101 ttacta 106  Q
    ||||||    
T  5576600 ttacta 5576595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 42735357 - 42735252
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  42735357 ttttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagatt 42735258  T
Q  101 ttacta 106  Q
    ||||||    
T  42735257 ttacta 42735252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 42937477 - 42937582
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  42937477 ttttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagatt 42937576  T
Q  101 ttacta 106  Q
    ||||||    
T  42937577 ttacta 42937582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 41479221 - 41479318
Alignment:
Q  9 gattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttacta 106  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41479221 gattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 41479318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10392317 - 10392217
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||||||||    
T  10392317 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttattaggatt-tttttttcttttaagatt 10392219  T
Q  101 tt 102  Q
    ||    
T  10392218 tt 10392217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 23115249 - 23115152
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagat 99  Q
    ||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  23115249 ttttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggatt-gttttttcttttaagat 23115152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 43959781 - 43959878
Alignment:
Q  9 gattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttacta 106  Q
    |||||||  ||||||| | ||||||||||| ||||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  43959781 gattttgatggattttgtggtgaaattttagcatgaaaaagtctttaattaaaacatgagatttcttatgattgtttttttcttttaagattttacta 43959878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 4403233 - 4403326
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||| ||||||  ||||||||||||    
T  4403233 ttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttcttgggattg--tttttcttttaa 4403326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4950096 - 4949995
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||| | ||||||| |||||| ||||||||||  ||| |||||||||||||| |||    
T  4950096 ttttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaatatttcatgcaaacataagatttcttaaaatt-gttttttcttttaaaatt 4949998  T
Q  101 tta 103  Q
    |||    
T  4949997 tta 4949995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14782215 - 14782141
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  14782215 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 14782141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44725890 - 44725816
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  44725890 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 44725816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9288537 - 9288444
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||| ||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  9288537 ttttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 9288444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 7466457 - 7466544
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  7466457 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 7466544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43166770 - 43166684
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggtttt 87  Q
    |||||||||||||||||||||||| | ||| ||||||| || |||||||| ||||||||||| ||||||||||||  ||||||||||    
T  43166770 ttttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttcttgagattggtttt 43166684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10295461 - 10295372
Alignment:
Q  1 ttttgatggatttt-gtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggtttttt 89  Q
    |||||||||||||| |||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||| ||||||    
T  10295461 ttttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttttt 10295372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 39189894 - 39189793
Alignment:
Q  2 tttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattt 101  Q
    ||||||||||||||  | |||||||||| |||||||| || |||||| |||||||||||||||||||||||||| ||||||  |||||||||||| | ||    
T  39189894 tttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatctttcatgaaaacatgagatttcttgggattg--tttttcttttaaaagtt 39189798  T
Q  102 tacta 106  Q
    |||||    
T  39189797 tacta 39189793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 18306045 - 18305977
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  18306045 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 18305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 19717961 - 19717887
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||| ||||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||    
T  19717961 ttttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttctt 19717887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 32497647 - 32497734
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||| ||||| ||||||| || || ||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  32497647 tggattttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 32497734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26856193 - 26856286
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||  |||| || |||||||||  |||||  ||||||||||||    
T  26856193 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataagatttcttgagattg--tttttcttttaa 26856286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 39467548 - 39467455
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||| ||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||| ||  |||||  ||||||||||||    
T  39467548 ttttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagattttttgagattg--tttttcttttaa 39467455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 18958807 - 18958736
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagattt 72  Q
    |||| ||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || ||||||    
T  18958807 ttttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagattagattt 18958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 9770503 - 9770434
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggtttt 87  Q
    |||||||||| |||||||||| ||| ||||| | |||||| |||||||||||||||||||||||| ||||    
T  9770503 ggattttctaatgaaattttaacataaaaaaatatttcatcaaaacatgagatttcttaggattgctttt 9770434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 32711351 - 32711305
Alignment:
Q  24 tctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagat 70  Q
    |||| |||||||||| ||||||||||||||||||||||||| |||||    
T  32711351 tctattgaaattttagcatgaaaaagtctttcatgaaaacaagagat 32711305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 37857241 - 37857328
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| ||||| ||||| | || |||||| ||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  37857241 tggattttgatggattttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 37857328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 42305858 - 42305801
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    ||||||| ||||| ||||||| || ||||||||| |||||||||| ||||||||||||    
T  42305858 ggattttgtagtgtaattttaacaagaaaaagtcattcatgaaaaaatgagatttctt 42305801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 31623818 - 31623894
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    ||||||| ||||| ||||||| || |||||||| ||||||||||| || |||||||||  |||||  ||||||||||||    
T  31623818 ggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagataagatttcttgagattg--tttttcttttaa 31623894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 8410477 - 8410416
Alignment:
Q  2 tttgatggattttgtggga--ttttctagtgaaattttatcatgaaaaagtctttcatgaaa 61  Q
    |||||||||||||||||||  |||| |||||||||||||  |||| ||||||||||| ||||    
T  8410477 tttgatggattttgtgggattttttttagtgaaattttagtatgacaaagtctttcacgaaa 8410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 16362318 - 16362405
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| ||||| ||||||| || |||||| ||||| || |||| ||||||||||||  |||||  ||||||||||||    
T  16362318 tggattttgatggattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagatttcttgagattg--tttttcttttaa 16362405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 4031341 - 4031297
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaa 62  Q
    ||||||| ||||| ||||||| || ||||||||||||||||||||    
T  4031341 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 4031297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 18914815 - 18914710
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18914815 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 18914716  T
Q  101 ttacta 106  Q
    ||||||    
T  18914715 ttacta 18914710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 34695400 - 34695505
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34695400 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 34695499  T
Q  101 ttacta 106  Q
    ||||||    
T  34695500 ttacta 34695505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7719340 - 7719238
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7719340 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 7719241  T
Q  101 tta 103  Q
    |||    
T  7719240 tta 7719238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 973311 - 973416
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  973311 ttttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 973410  T
Q  101 ttacta 106  Q
    ||||||    
T  973411 ttacta 973416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 39219457 - 39219352
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  39219457 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagatt 39219358  T
Q  101 ttacta 106  Q
    ||||||    
T  39219357 ttacta 39219352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 40996729 - 40996624
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40996729 ttttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 40996630  T
Q  101 ttacta 106  Q
    ||||||    
T  40996629 ttacta 40996624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 43581170 - 43581065
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  43581170 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattatttttttcttttaagatt 43581071  T
Q  101 ttacta 106  Q
    ||||||    
T  43581070 ttacta 43581065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 47914393 - 47914498
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  47914393 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagatt 47914492  T
Q  101 ttacta 106  Q
    ||||||    
T  47914493 ttacta 47914498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 44343476 - 44343374
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  44343476 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgagatttcttaggattgtttttttcttttaagatt 44343377  T
Q  101 tta 103  Q
    |||    
T  44343376 tta 44343374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 30440923 - 30441028
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  30440923 ttttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatttcttaggattgtttttttcttttaagatt 30441022  T
Q  101 ttacta 106  Q
    ||||||    
T  30441023 ttacta 30441028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 47879295 - 47879400
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  47879295 ttttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagatt 47879394  T
Q  101 ttacta 106  Q
    ||||||    
T  47879395 ttacta 47879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7718442 - 7718345
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagat 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7718442 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggatt-gttttttcttttaagat 7718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32142997 - 32142895
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||| |||||||||||||||||    
T  32142997 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttccataaaaacatgagatttcttaagattgtttttttcttttaagatt 32142898  T
Q  101 tta 103  Q
    |||    
T  32142897 tta 32142895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12893535 - 12893639
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattg--gttttttcttttaaga 98  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  12893535 ttttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttttcttttaaga 12893634  T
Q  99 tttta 103  Q
    |||||    
T  12893635 tttta 12893639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 20275343 - 20275238
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||    
T  20275343 ttttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatttcttagcattgtttttttcttttaagatt 20275244  T
Q  101 ttacta 106  Q
    ||||||    
T  20275243 ttacta 20275238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7113579 - 7113684
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    ||||||| ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  7113579 ttttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaggatt 7113678  T
Q  101 ttacta 106  Q
    ||||||    
T  7113679 ttacta 7113684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 34009140 - 34009245
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||| |||||||| | |||||||| ||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  34009140 ttttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaaacatgagatttcttaggattgtttttttcttttaagatt 34009239  T
Q  101 ttacta 106  Q
    ||||||    
T  34009240 ttacta 34009245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 10068587 - 10068689
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||||||||  |||||||||||| |||    
T  10068587 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgagatttgttaggattg--tttttcttttaaaatt 10068684  T
Q  101 ttact 105  Q
    |||||    
T  10068685 ttact 10068689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 9179996 - 9180076
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggtttt 87  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  9179996 tggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 9180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 43187437 - 43187334
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||| ||||||| ||||||||||||||||||||| || |||||||||||||||||| ||||||||||| || ||||||  |||||||||||| | |    
T  43187437 ttttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtctttcatgaagacatgagattttttgggattg--tttttcttttaaaagt 43187340  T
Q  101 ttacta 106  Q
    ||||||    
T  43187339 ttacta 43187334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 23101418 - 23101492
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  23101418 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 23101492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28342467 - 28342541
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  28342467 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 28342541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 29614844 - 29614770
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  29614844 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29614770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39784219 - 39784293
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  39784219 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 39784293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3023046 - 3023139
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||||||||||||  |||||  ||||||||||||    
T  3023046 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttcttgagattg--tttttcttttaa 3023139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18838509 - 18838602
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||||||||||||  |||||  ||||||||||||    
T  18838509 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattg--tttttcttttaa 18838602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 19810915 - 19810983
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  19810915 tggattttgtggaattttctagtgaaattttagcataaaaatgtctttcatgaaaacatgagatttctt 19810983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 28034885 - 28034793
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttctttta 95  Q
    |||||||||||||||||||||||| ||||| ||||||| ||  ||||||||||||||||||| ||||||||||||  |||||  |||||||||||    
T  28034885 ttttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttctttta 28034793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 727638 - 727692
Alignment:
Q  9 gattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaac 63  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  727638 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 3797131 - 3797049
Alignment:
Q  16 tgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattt 101  Q
    ||||||||||||||||||||||| ||||||||||||||| | |||||||| ||||||||||||||||  |||||||||||| ||||    
T  3797131 tgggattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttcttaggattg--tttttcttttaaaattt 3797049  T

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Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 33382757 - 33382855
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||| ||  |||||  |||||||||||| |||    
T  33382757 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttatttagattg--tttttcttttaaaatt 33382854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 7993262 - 7993355
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||| ||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||  |||||  ||||||||||||    
T  7993262 ttttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagattg--tttttcttttaa 7993355  T

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Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 8675453 - 8675546
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||| ||||| ||||||| ||||||||||||  |||||  ||||||||||||    
T  8675453 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttcttgagattg--tttttcttttaa 8675546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37972947 - 37972854
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    ||||||||||||||| |||||||| ||||| ||||||| || |||||||||||||||||||| |||||| |||||  |||||  ||||||||||||    
T  37972947 ttttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagacttcttgagattg--tttttcttttaa 37972854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41827424 - 41827517
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||| | ||||| ||||||| || ||||| |||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  41827424 ttttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatgagatttcttgagattg--tttttcttttaa 41827517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43679541 - 43679592
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtct 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43679541 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12740492 - 12740573
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 82  Q
    ||||||| |||||||||||||||| ||||| ||||||| || || |||||||||||| |||| ||||||||||||| |||||    
T  12740492 ttttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgagatttcttaagattg 12740573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9882316 - 9882224
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| |||||||  | ||||||||||||||| |||| ||||||||||||  |||||  ||||||||||||    
T  9882316 ttttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatgagatttcttgagattg--tttttcttttaa 9882224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 31639031 - 31639082
Alignment:
Q  55 catgaaaacatgagatttcttaggattggttttttcttttaagattttacta 106  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  31639031 catgaaaacatgatatttcttaggattgtttttttcttttaagattttacta 31639082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 1470304 - 1470213
Alignment:
Q  11 ttttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttac 104  Q
    ||||||||||||||||  | |||||||| ||||||||| |||||  |||||||  |||||||| ||| |||| |||||||||||||||||||||    
T  1470304 ttttgtgggattttctgataaaattttagcatgaaaaaatcttttttgaaaac--gagatttcctagcattgtttttttcttttaagattttac 1470213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 12963821 - 12963919
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||||||||||  |     |||||||||||||  |||||  |||||||||||| |||    
T  12963821 ttttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtctttttt-----catgagatttcttgagattg--tttttcttttaaaatt 12963913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 19251655 - 19251729
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 81  Q
    |||||||||  ||||||||| ||||||||||| ||  |||||||||||||||||||| ||| ||||||| |||||    
T  19251655 tggattttgatggattttcttgtgaaattttagcaataaaaagtctttcatgaaaacctgaaatttcttgggatt 19251729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 40460791 - 40460704
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  40460791 tggattttgatggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttgagattg--tttttcttttaa 40460704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 509772 - 509840
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||  ||||||| |||||  |||||| || |||||||||||||||||||| ||||||||||||    
T  509772 tggattttgatggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgagatttctt 509840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 25805815 - 25805862
Alignment:
Q  4 tgatggattttgtgggattttctagtgaaattttatcatgaaaaagtc 51  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||||    
T  25805815 tgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 10617038 - 10617141
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacat-gagatttcttaggattggttttttcttttaagat 99  Q
    ||||||||||||||||| ||||||||||||| ||||||  |  || ||||||||||| |||||||  |||||| || ||||||   ||||||||||| ||    
T  10617038 ttttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacataaagattttttgggattg--cttttcttttaaaat 10617135  T
Q  100 tttact 105  Q
    ||||||    
T  10617136 tttact 10617141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 29585630 - 29585717
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| ||||| ||||||| || ||||||||||||||| |||| |||| |||||||  |||||  ||||||||||||    
T  29585630 tggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaaatttcttgagattg--tttttcttttaa 29585717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 44121984 - 44121897
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||| ||  |||||  ||||||||||||    
T  44121984 tggattttgatggattttgtagtgtaattttaacaagaaaaagtctttaatgaaaagatgagattttttgagattg--tttttcttttaa 44121897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 44623357 - 44623295
Alignment:
Q  10 attttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagattt 72  Q
    ||||||||| |||||||||||||||||||  |||||||||||| |||| |||| |||| ||||    
T  44623357 attttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaatatgatattt 44623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 17001106 - 17001049
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    ||||||| ||||| |||| || || |||||||||||||||||||| ||||||||||||    
T  17001106 ggattttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttctt 17001049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 47066821 - 47066878
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    ||||||| ||||| ||||||| || |||||| | ||||||||||| ||||||||||||    
T  47066821 ggattttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttctt 47066878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 33892321 - 33892269
Alignment:
Q  20 attttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagattt 72  Q
    ||||| ||||| ||||||| || ||||||||||||||| |||| |||||||||    
T  33892321 attttgtagtgtaattttaacaagaaaaagtctttcattaaaagatgagattt 33892269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6197558 - 6197453
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6197558 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 6197459  T
Q  101 ttacta 106  Q
    ||||||    
T  6197458 ttacta 6197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 2300818 - 2300714
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||    
T  2300818 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt-tttttttcttttaaaatt 2300720  T
Q  101 ttacta 106  Q
    ||||||    
T  2300719 ttacta 2300714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 1391749 - 1391854
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||||    
T  1391749 ttttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattgttttttctttttaagatt 1391848  T
Q  101 ttacta 106  Q
    ||||||    
T  1391849 ttacta 1391854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 28002790 - 28002895
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||    
T  28002790 ttttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaagcttcttaggattgtttttttcttttaagatt 28002889  T
Q  101 ttacta 106  Q
    ||||||    
T  28002890 ttacta 28002895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 29076724 - 29076812
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggtttttt 89  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||| ||||||    
T  29076724 ttttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattttttaggattgttttttt 29076812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 29111698 - 29111786
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggtttttt 89  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||| ||||||    
T  29111698 ttttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattttttaggattgttttttt 29111786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31895821 - 31895895
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  31895821 ttttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 31895895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 7051970 - 7052056
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggtttt 87  Q
    |||||||||||||||| |||||||||||| |||||||| ||||||||||| |||||| ||| ||||||||||||||| |||| ||||    
T  7051970 ttttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgagatttcttagaattgttttt 7052056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 14262513 - 14262420
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||| ||||||||  |||||  ||||||||||||    
T  14262513 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgggatttcttgagattg--tttttcttttaa 14262420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 34759130 - 34759056
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  34759130 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 34759056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34773534 - 34773608
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    ||||||||||||||||||||||||  |||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  34773534 ttttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 7497201 - 7497274
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  7497201 ttttgatggattttgtgg-attttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7497274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 2238676 - 2238741
Alignment:
Q  41 atgaaaaagtctttcatgaaaacatgagatttcttaggattg-gttttttcttttaagattttact 105  Q
    |||||||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  2238676 atgaaaaaatctttcatgaaaacatgagatttcttaagattgttttttttcttttaagattttact 2238741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 31067614 - 31067682
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||    
T  31067614 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 31067682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 4200511 - 4200443
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||  ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  4200511 tggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 4200443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 30385141 - 30385056
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||| ||||| ||||||| ||  | ||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  30385141 tggattttgtgggattttgtagtgtaattttaaca--acaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 30385056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 657114 - 657165
Alignment:
Q  54 tcatgaaaacatgagatttcttaggattggttttttcttttaagattttacta 106  Q
    |||||||||||||| ||||||||||||| |||||||||||||| |||||||||    
T  657114 tcatgaaaacatgaaatttcttaggatt-gttttttcttttaaaattttacta 657165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 11113773 - 11113733
Alignment:
Q  41 atgaaaaagtctttcatgaaaacatgagatttcttaggatt 81  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  11113773 atgaaaacgtctttcatgaaaacatgagatttcttaggatt 11113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 657082 - 657122
Alignment:
Q  4 tgatggattttgtgggattttctagtgaaattttatcatgaaaa 47  Q
    ||||||||||||||||||||   |||||||||||||||||||||    
T  657082 tgatggattttgtgggattt---agtgaaattttatcatgaaaa 657122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 25331256 - 25331361
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25331256 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 25331355  T
Q  101 ttacta 106  Q
    ||||||    
T  25331356 ttacta 25331361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 30009758 - 30009653
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  30009758 ttttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagatt 30009659  T
Q  101 ttacta 106  Q
    ||||||    
T  30009658 ttacta 30009653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 34228664 - 34228559
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  34228664 ttttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagatt 34228565  T
Q  101 ttacta 106  Q
    ||||||    
T  34228564 ttacta 34228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 31314815 - 31314719
Alignment:
Q  9 gattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttact 105  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31314815 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttact 31314719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 39479436 - 39479332
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  39479436 ttttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcatgagatttcttaggattgtttttttcttttaagatt 39479337  T
Q  101 ttact 105  Q
    |||||    
T  39479336 ttact 39479332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41881163 - 41881056
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattg--gttttttcttttaaga 98  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  41881163 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttttcttttaaga 41881064  T
Q  99 ttttacta 106  Q
    ||||||||    
T  41881063 ttttacta 41881056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 1044932 - 1045035
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||    
T  1044932 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttagaattgtttttttcttttaagatt 1045031  T
Q  101 ttac 104  Q
    ||||    
T  1045032 ttac 1045035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 22202140 - 22202245
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| |||    
T  22202140 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagatttcttagcattgtttttttcttttaaaatt 22202239  T
Q  101 ttacta 106  Q
    ||||||    
T  22202240 ttacta 22202245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 42786809 - 42786913
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  42786809 ttttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgatt-gttttttcttttaagatt 42786907  T
Q  101 ttacta 106  Q
    ||||||    
T  42786908 ttacta 42786913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 24131063 - 24130957
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaag-tctttcatgaaaacatgagatttcttaggattggttttttcttttaagat 99  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24131063 ttttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 24130964  T
Q  100 tttacta 106  Q
    |||||||    
T  24130963 tttacta 24130957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 41320935 - 41321038
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  41320935 ttttgatggattttgtgggatgttctagtgaaattttagtatgaaaaagtctttcataaaaacatgagatttcttaagattgattttttcttttaagatt 41321034  T
Q  101 ttac 104  Q
    ||||    
T  41321035 ttac 41321038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 12113070 - 12113176
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttctttt-aagat 99  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||    
T  12113070 ttttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttgggattgtttttttcttttaaagat 12113169  T
Q  100 tttacta 106  Q
    |||||||    
T  12113170 tttacta 12113176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 3436718 - 3436823
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||||||||    
T  3436718 ttttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttcttagaattgtttttttcttttaagatt 3436817  T
Q  101 ttacta 106  Q
    ||||||    
T  3436818 ttacta 3436823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 46635721 - 46635624
Alignment:
Q  9 gattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttacta 106  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  46635721 gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaaaattttacta 46635624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 55302968 - 55303077
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattg----gttttttcttttaa 96  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||     |||||||||||||    
T  55302968 ttttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttgttttttttcttttaa 55303067  T
Q  97 gattttacta 106  Q
    ||||||||||    
T  55303068 gattttacta 55303077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 1113018 - 1113109
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttctt 92  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1113018 ttttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttctt 1113109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 37046532 - 37046425
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaa-ttttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattg-gttttttcttttaaga 98  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||    
T  37046532 ttttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattgttttttttcttttaaga 37046433  T
Q  99 ttttacta 106  Q
    ||||||||    
T  37046432 ttttacta 37046425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 32950917 - 32950811
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttagga-ttggttttttcttttaagat 99  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| || ||  ||||||||||||||||    
T  32950917 ttttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaagatttttttttttcttttaagat 32950818  T
Q  100 tttacta 106  Q
    |||||||    
T  32950817 tttacta 32950811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7007499 - 7007605
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattg-gttttttcttttaagat 99  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||  | ||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  7007499 ttttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttcttaagattgttttttttcttttaagat 7007598  T
Q  100 tttacta 106  Q
    |||||||    
T  7007599 tttacta 7007605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 8711991 - 8712094
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||| |||||||||||||||||  |||||  |||||||||||| |||    
T  8711991 ttttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattg--tttttcttttaaaatt 8712088  T
Q  101 ttacta 106  Q
    ||||||    
T  8712089 ttacta 8712094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 39307334 - 39307234
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||| | | || ||||||||||||||||||| ||| ||||||||||||||||||    
T  39307334 ttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaacatgagatttcttagaatt-gttttttcttttaagatt 39307236  T
Q  101 tt 102  Q
    ||    
T  39307235 tt 39307234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 40537233 - 40537136
Alignment:
Q  9 gattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttacta 106  Q
    |||||||  ||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  40537233 gattttgatggattttgtggtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatttttttttttttttaagattttacta 40537136  T

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Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27454159 - 27454061
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagat 99  Q
    |||||||| ||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| | |||| ||| ||||| ||||||||||||||||    
T  27454159 ttttgatgaattttgtggaattttctagtgaaattttggcatgaaaaagtctttcatgaaaacataatatttgttaagattgtttttttcttttaagat 27454061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 11090435 - 11090532
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttacta 106  Q
    |||||||||||||||||| ||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||  |||||||||| | |||||||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattg--tttttctttttaaattttacta 11090532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 24736460 - 24736534
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    ||||||||||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||||||    
T  24736460 ttttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttctt 24736534  T

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Target: chr4; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 53275964 - 53276069
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttca-tgaaaacatgagatttcttaggattggttttttcttttaagat 99  Q
    ||||||||||||||||| ||||||||| | |||||||| ||||||||||||||||| | ||||| | |||||| |||||||| |||||||||||||||||    
T  53275964 ttttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaaactttagattttttaggatt-gttttttcttttaagat 53276062  T
Q  100 tttacta 106  Q
    |||||||    
T  53276063 tttacta 53276069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5441529 - 5441603
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  5441529 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 5441603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27768181 - 27768255
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  27768181 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 27768255  T

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Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 54341269 - 54341343
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  54341269 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 54341343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 12913345 - 12913413
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||    
T  12913345 tggattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgagatttctt 12913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19740989 - 19740929
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaa 61  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  19740989 ttttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 54853549 - 54853456
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  54853549 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 54853456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 37828483 - 37828409
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| |||||||  | |||||||||||||||||||| ||||||||||||    
T  37828483 ttttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgagatttctt 37828409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 48261252 - 48261326
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  48261252 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttctt 48261326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44770934 - 44770862
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttc 73  Q
    ||||| ||||||||||||||||||||||||||||||||  | |||||||||||||||||  ||||||||||||    
T  44770934 ttttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtctttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 56445430 - 56445362
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||| || ||||||||||||||    
T  56445430 tggattttgtgggattttctagtgaaactttagcaagaaaaagtctttcataaagacatgagatttctt 56445362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 7249846 - 7249795
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtct 52  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7249846 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41725247 - 41725321
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||| ||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  41725247 ttttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 41725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 9163201 - 9163292
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||        ||||||||||||||||||||||| |||||  ||||| ||||||||||    
T  9163201 ttttgatggattttgtggaattttctagtgaaattttagcatgaa--------tcatgaaaacatgagatttcttatgattg--ttttttttttaagatt 9163290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25446175 - 25446227
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctt 53  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  25446175 ttttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 32322216 - 32322309
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| |||||||  | ||||| ||||||||| |||| ||||||||||||  |||||  ||||||||||||    
T  32322216 ttttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttcttgagattg--tttttcttttaa 32322309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 51321046 - 51321139
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||  ||||| ||||| ||||||| || |||||||| ||||||||||| ||||||||||||  |||||  ||||||||||||    
T  51321046 ttttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttcttgagattg--tttttcttttaa 51321139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28541823 - 28541874
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtct 52  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  28541823 ttttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 41581862 - 41581795
Alignment:
Q  10 attttgtgggattttctagtgaaattttatcatg-aaaaagtctttcatgaaaacatgagatttctta 76  Q
    ||||||||||||||||||||||||||||| |||| ||||| | ||||||| |||||||||||||||||    
T  41581862 attttgtgggattttctagtgaaattttaacatgaaaaaaatatttcatgtaaacatgagatttctta 41581795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 30967384 - 30967302
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggtttttt 89  Q
    |||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| || |||||||||  ||||| ||||||    
T  30967384 tggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttcttgagattgttttttt 30967302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 23987337 - 23987422
Alignment:
Q  9 gattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||  ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  23987337 gattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 23987422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 37915952 - 37916045
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| | ||||| || ||||||||| |||||||||| || |||||| ||  |||||  ||||||||||||    
T  37915952 ttttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagatttattgagattg--tttttcttttaa 37916045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 36479316 - 36479221
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttact 105  Q
    |||||||||  ||||||| ||||||||||||| ||  ||||||||||| ||||||||||||||||||||  ||||   |||||||||||| ||||||||    
T  36479316 tggattttgatggatttt-tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagatttcttgagatt--atttttcttttaaaattttact 36479221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 32684072 - 32683996
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||| ||  |||||  ||||||||||||    
T  32684072 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttattgagattg--tttttcttttaa 32683996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 28484020 - 28484093
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 81  Q
    |||||||||| ||||||| ||||| ||||| | || |||||||||||||||||||| | ||||||||||| ||||    
T  28484020 tggattttgtaggattttgtagtgtaatttaa-caagaaaaagtctttcatgaaaagacgagatttcttaagatt 28484093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 36728023 - 36727943
Alignment:
Q  8 ggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggtttttt 89  Q
    ||||||||| ||||||| ||||||||||||| || |||||| ||||||||| | ||||||||||| ||  ||||| ||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattttttgagattgttttttt 36727943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 49501596 - 49501507
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttc--atgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||| ||||| ||||| ||||||| || |||||||||||||  || |||| ||||||||||||  |||||  ||||||||||||    
T  49501596 tggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgagattg--tttttcttttaa 49501507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 49507661 - 49507572
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttc--atgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||| ||||| ||||| ||||||| || |||||||||||||  || |||| ||||||||||||  |||||  ||||||||||||    
T  49507661 tggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgagattg--tttttcttttaa 49507572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 23465081 - 23465117
Alignment:
Q  2 tttgatggattttgtgggattttctagtgaaatttta 38  Q
    |||||||||||||||||||||||||||| ||||||||    
T  23465081 tttgatggattttgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13400887 - 13400785
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||| |||||||| |||||| || ||||| ||| |||| ||||| ||||  || ||||||||||||||||   |||| ||| |||||||||||||     
T  13400887 ttttgatgaattttgtgagattttttaatgaaaatttttcataaaaaaatcttctattaaaacatgagatttctatagatt-gttatttcttttaagatc 13400789  T
Q  101 ttac 104  Q
    ||||    
T  13400788 ttac 13400785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 5800099 - 5800186
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    ||||||||||| |||||| ||| | ||||||| || |||||||||||| ||||||| || |||||| ||  |||||  ||||||||||||    
T  5800099 tggattttgtgagattttgtagagtaattttaacaagaaaaagtctttaatgaaaagataagattttttgagattg--tttttcttttaa 5800186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 25446224 - 25446258
Alignment:
Q  72 tcttaggattggttttttcttttaagattttacta 106  Q
    ||||||||||| |||||||||||||||||||||||    
T  25446224 tcttaggattgtttttttcttttaagattttacta 25446258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 50018383 - 50018437
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagattt 72  Q
    ||||||| ||||| ||||||| || |||||||||||||| ||||| |||||||||    
T  50018383 ggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgagattt 50018437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28371049 - 28371086
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaatttta 38  Q
    ||||| || |||||||||||||||||||||||||||||    
T  28371049 ttttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 49469411 - 49469459
Alignment:
Q  56 atgaaaacatgagatttcttaggattggttttttcttttaagattttact 105  Q
    ||||||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  49469411 atgaaaacatgagatttctta-gattgtttttttcttctaaaattttact 49469459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 49834897 - 49834840
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    ||||||| ||||| ||||||| || ||| ||||||||||| |||| ||||||||||||    
T  49834897 ggattttgtagtgtaattttaacaagaagaagtctttcattaaaagatgagatttctt 49834840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 55047674 - 55047641
Alignment:
Q  41 atgaaaaagtctttcatgaaaacatgagatttct 74  Q
    ||||||||||||||||||||||||||| ||||||    
T  55047674 atgaaaaagtctttcatgaaaacatgatatttct 55047641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 996167 - 996062
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  996167 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 996068  T
Q  101 ttacta 106  Q
    ||||||    
T  996067 ttacta 996062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 10139227 - 10139122
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10139227 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 10139128  T
Q  101 ttacta 106  Q
    ||||||    
T  10139127 ttacta 10139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20498334 - 20498439
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20498334 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 20498433  T
Q  101 ttacta 106  Q
    ||||||    
T  20498434 ttacta 20498439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6131314 - 6131210
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6131314 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt-gttttttcttttaagatt 6131216  T
Q  101 ttacta 106  Q
    ||||||    
T  6131215 ttacta 6131210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 19253952 - 19254057
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  19253952 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaaaatt 19254051  T
Q  101 ttacta 106  Q
    ||||||    
T  19254052 ttacta 19254057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 6589689 - 6589795
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttc-ttttaagat 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  6589689 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttctttttaagat 6589788  T
Q  100 tttacta 106  Q
    |||||||    
T  6589789 tttacta 6589795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3206286 - 3206181
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  3206286 ttttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagatt 3206187  T
Q  101 ttacta 106  Q
    ||||||    
T  3206186 ttacta 3206181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 3999726 - 3999624
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  3999726 ttttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagatt 3999627  T
Q  101 tta 103  Q
    |||    
T  3999626 tta 3999624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 37820558 - 37820453
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  37820558 ttttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaagattgtttttttcttttaagatt 37820459  T
Q  101 ttacta 106  Q
    ||||||    
T  37820458 ttacta 37820453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 29448939 - 29448833
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttc-ttttaagat 99  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  29448939 ttttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttctttttaagat 29448840  T
Q  100 tttacta 106  Q
    |||||||    
T  29448839 tttacta 29448833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 25418491 - 25418595
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  25418491 ttttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgagattccttaggatt-gttttttcttttaagatt 25418589  T
Q  101 ttacta 106  Q
    ||||||    
T  25418590 ttacta 25418595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 35337860 - 35337963
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  35337860 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt-ttaggattgtttttttcttttaagatt 35337957  T
Q  101 ttacta 106  Q
    ||||||    
T  35337958 ttacta 35337963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 40246969 - 40247073
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||    
T  40246969 ttttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttatgatt-gttttttcttttaagatt 40247067  T
Q  101 ttacta 106  Q
    ||||||    
T  40247068 ttacta 40247073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 54625717 - 54625818
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  54625717 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttcttaagattgatttttgcttttaagatt 54625816  T
Q  101 tt 102  Q
    ||    
T  54625817 tt 54625818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 33807879 - 33807798
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 82  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33807879 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 33807798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 53929209 - 53929104
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||||||| ||||||||||||| |||    
T  53929209 ttttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattttttaggattgtttttttcttttaaaatt 53929110  T
Q  101 ttacta 106  Q
    ||||||    
T  53929109 ttacta 53929104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6035134 - 6035031
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| |||||  |||||||||||| |||    
T  6035134 ttttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaagattg--tttttcttttaaaatt 6035037  T
Q  101 ttacta 106  Q
    ||||||    
T  6035036 ttacta 6035031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 44762118 - 44762011
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggtttttt--cttttaaga 98  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||| ||||||   ||||||||    
T  44762118 ttttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaagattgttttttttctttttaaga 44762019  T
Q  99 ttttacta 106  Q
    ||||||||    
T  44762018 ttttacta 44762011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 52114654 - 52114759
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    ||||||| |||||||||| |||||||||| |||||||| ||||||||| |||||  |||||||||||||||||||||||||  |||||||||||||||||    
T  52114654 ttttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaacatgagatttcttaggattatttttttcttttaagatt 52114753  T
Q  101 ttacta 106  Q
    ||||||    
T  52114754 ttacta 52114759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 1439975 - 1439869
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttc-ttttaagat 99  Q
    ||||||| ||||||||||||||||||||| |||||||   |||||||||||||||| ||||||||||||||| ||||||||| ||||||| |||||||||    
T  1439975 ttttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagattttttaggattgtttttttctttttaagat 1439876  T
Q  100 tttacta 106  Q
    |||||||    
T  1439875 tttacta 1439869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 27899467 - 27899560
Alignment:
Q  9 gattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttact 105  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||| ||||||||  |||||||||||||    
T  27899467 gattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgatt-gttttttc--ttaagattttact 27899560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5825187 - 5825274
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttt 88  Q
    ||||||| |||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  5825187 ttttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggctttcatgaaaacatgagatttcttatgattgtttttt 5825274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 33996622 - 33996547
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctta 76  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  33996622 ttttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatttctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17946413 - 17946506
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  17946413 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 17946506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18749737 - 18749830
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  18749737 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 18749830  T

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Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 52080050 - 52080142
Alignment:
Q  9 gattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattg-gttttttcttttaagattttacta 106  Q
    ||||||||||||||||||| |||||||||| |||||||||||      ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  52080050 gattttgtgggattttctaatgaaattttagcatgaaaaagt------tgaaaacatgagatttcttaggattgttttttttcttttaagattttacta 52080142  T

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Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36674211 - 36674137
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  36674211 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 36674137  T

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Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 40897269 - 40897343
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  40897269 ttttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40897343  T

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Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 44276506 - 44276603
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttacta 106  Q
    |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||| || |||||   |||||||||||| | |||||||    
T  44276506 tggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggatt--atttttcttttaaaagtttacta 44276603  T

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Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11431651 - 11431725
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    ||||| |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  11431651 ttttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 11431725  T

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Target: chr3; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 32580301 - 32580375
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    ||||||||||||||| |||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  32580301 ttttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 32580375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 34484111 - 34484037
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  34484111 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 34484037  T

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Target: chr3; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 51699561 - 51699495
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatga 67  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  51699561 ttttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

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Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 54628969 - 54629043
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||    
T  54628969 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 54629043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 33807733 - 33807680
Alignment:
Q  29 tgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 82  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 33807680  T

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Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44906594 - 44906501
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||| ||||||||||||||| ||||| ||||||| || ||||| |||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  44906594 ttttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 44906501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 52810503 - 52810596
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||| | ||||||| || |||||| ||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  52810503 ttttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 52810596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 31646365 - 31646293
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||  ||||||||||||    
T  31646365 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa--atgagatttctt 31646293  T

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Target: chr3; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 50903321 - 50903247
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||| ||||| ||||||| ||||||||||||    
T  50903321 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaatatgagatttctt 50903247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26107386 - 26107479
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    ||||||||||||||||| |||||| ||||| ||||||| || |||||||| |||||| |||| ||||||||||||  |||||  ||||||||||||    
T  26107386 ttttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttcttgagattg--tttttcttttaa 26107479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 48379282 - 48379375
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| |||||||  | ||||| |||||||||||||| || |||||||||  |||||  ||||||||||||    
T  48379282 ttttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttcttgagattg--tttttcttttaa 48379375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 37454985 - 37455069
Alignment:
Q  10 attttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    ||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||||||||||||  |||||  ||||||||||||    
T  37454985 attttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattg--tttttcttttaa 37455069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 10728726 - 10728639
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  10728726 tggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 10728639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22057887 - 22057933
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaa 47  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  22057887 ttttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 50762135 - 50762048
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  50762135 tggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 50762048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 39842567 - 39842482
Alignment:
Q  9 gattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||  ||||||| || || ||||||| || |||||||||||||||||||| |||||||||||| ||||||  ||||||||||||    
T  39842567 gattttgacggattttgtaatgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgggattg--tttttcttttaa 39842482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 45862983 - 45863059
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 45863059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 6975867 - 6975924
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaaca 64  Q
    |||| |||||||||||||||||| |||||| | ||||||| |||||||||||||||||    
T  6975867 tggaatttgtgggattttctagtaaaatttgagcatgaaacagtctttcatgaaaaca 6975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29030130 - 29030203
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttct 74  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||    | ||| |||||||||||||||||||    
T  29030130 ttttgatggattttgtggaattttctaatgaaattttaacatgaattttttttttatgaaaacatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 51737807 - 51737746
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaa 62  Q
    |||||||||||||||||||||||| | ||| ||||||| || ||||||||||||||| ||||    
T  51737807 ttttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaa 51737746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 15492942 - 15492874
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||| |||| |||||||||||||||| || |||||| |||||||||||  ||| |||||||||    
T  15492942 tggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttctt 15492874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 39038161 - 39038229
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||  ||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||    
T  39038161 tggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 39038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20833117 - 20833187
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatt 71  Q
    ||||||||||||||||| |||||  ||||| ||||||| || |||||||| ||||||||||| || |||||    
T  20833117 ttttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 52618046 - 52617959
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||      || ||||||||||| |||| ||||||||||||  |||||  ||||||||||||    
T  52618046 ttttgatggattttgtgggattttgtagtgtaatttt------aacaagtctttcataaaaagatgagatttcttgagattg--tttttcttttaa 52617959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 12103733 - 12103789
Alignment:
Q  19 gattttctagtgaaattttatcatgaaaaagtctttcatgaaaaca-tgagatttct 74  Q
    |||||||||||||||||||| || ||| |||||||||||||| ||| ||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaagacattgagatttct 12103789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 55235309 - 55235359
Alignment:
Q  1 ttttgatggatttt-gtgggattttctagtgaaattttatcatgaaaaagt 50  Q
    |||||||||||||| ||||||||||||| |||||||||| ||| |||||||    
T  55235309 ttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 23753470 - 23753414
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    ||||||| ||||| ||||||| || |||||||||||||||| ||| ||||||||||||    
T  23753470 ggattttgtagtgtaattttaacaagaaaaagtctttcatg-aaagatgagatttctt 23753414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20605363 - 20605468
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20605363 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 20605462  T
Q  101 ttacta 106  Q
    ||||||    
T  20605463 ttacta 20605468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 31170707 - 31170602
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31170707 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 31170608  T
Q  101 ttacta 106  Q
    ||||||    
T  31170607 ttacta 31170602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 12407507 - 12407612
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  12407507 ttttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagatt 12407606  T
Q  101 ttacta 106  Q
    ||||||    
T  12407607 ttacta 12407612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 14198660 - 14198555
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14198660 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 14198561  T
Q  101 ttacta 106  Q
    ||||||    
T  14198560 ttacta 14198555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 16269818 - 16269923
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16269818 ttttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 16269917  T
Q  101 ttacta 106  Q
    ||||||    
T  16269918 ttacta 16269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24776482 - 24776586
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24776482 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt-gttttttcttttaagatt 24776580  T
Q  101 ttacta 106  Q
    ||||||    
T  24776581 ttacta 24776586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 43847774 - 43847878
Alignment:
Q  2 tttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattt 101  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43847774 tttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttcttaggattgtttttttcttttaagattt 43847873  T
Q  102 tacta 106  Q
    |||||    
T  43847874 tacta 43847878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 9120253 - 9120358
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    ||||||||||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9120253 ttttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 9120352  T
Q  101 ttacta 106  Q
    ||||||    
T  9120353 ttacta 9120358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22551846 - 22551741
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  22551846 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttatgattgttttttccttttaagatt 22551747  T
Q  101 ttacta 106  Q
    ||||||    
T  22551746 ttacta 22551741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 305544 - 305443
Alignment:
Q  5 gatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttac 104  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  305544 gatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttatttcttttaagattttac 305445  T
Q  105 ta 106  Q
    ||    
T  305444 ta 305443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 5093130 - 5093025
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattg-gttttttcttttaagat 99  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  5093130 ttttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgttttttttcttttaagat 5093031  T
Q  100 tttact 105  Q
    ||||||    
T  5093030 tttact 5093025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 35317189 - 35317294
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||  |||| |||||||||||||||||    
T  35317189 ttttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaacattgtttttttcttttaagatt 35317288  T
Q  101 ttacta 106  Q
    ||||||    
T  35317289 ttacta 35317294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 32125380 - 32125486
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt-aggattggttttttcttttaagat 99  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||| |  |||| ||||||||||||||||    
T  32125380 ttttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaaaaattgtttttttcttttaagat 32125479  T
Q  100 tttacta 106  Q
    |||||||    
T  32125480 tttacta 32125486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 44765902 - 44765998
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||         ||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  44765902 ttttgatggattttgtgggattttctagtgaaattttagcat---------tttcatgaaaacatgagatttcttaggattgtttttttcttttaaaatt 44765992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 1789569 - 1789676
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaa-ca-tgagatttcttaggattggttttttcttttaaga 98  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||| || | | | |||||||||||  ||||||||||||| |    
T  1789569 ttttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaaaatcattcaaaattcttaggattatttttttcttttaaaa 1789668  T
Q  99 ttttacta 106  Q
    ||||||||    
T  1789669 ttttacta 1789676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 10125374 - 10125280
Alignment:
Q  10 attttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttacta 106  Q
    ||||||||||||||| ||||||||||||| || ||||||||||||||| |||||| ||||||||||| |||||  |||||||||||| | |||||||    
T  10125374 attttgtgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgagatttcttaagattg--tttttcttttaaaagtttacta 10125280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 26601285 - 26601191
Alignment:
Q  9 gattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttacta 106  Q
    ||||||||||||||||||||||||| |||| |||  |||||| ||| |||||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  26601285 gattttgtgggattttctagtgaaactttaacat-taaaagtttttgatgaaaacat-agattttttaggatt-gttttttcttttaagattttacta 26601191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 10657533 - 10657626
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||| |||||||  |||||  ||||||||||||    
T  10657533 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaaatttcttgagattg--tttttcttttaa 10657626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 33135750 - 33135842
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||  |||||  ||||||||||||    
T  33135750 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgagatttcttgagattg--tttttcttttaa 33135842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18177394 - 18177468
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||| || |||| ||||||||||||    
T  18177394 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatttctt 18177468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 43078690 - 43078764
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||| || |||||||||    
T  43078690 ttttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaagataagatttctt 43078764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 13833509 - 13833441
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||| ||||| ||||||| || ||||||||||||||||| || ||||||||||||    
T  13833509 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttctt 13833441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25288286 - 25288379
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||| ||||||||||||||| ||||| ||||||| || || || |||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  25288286 ttttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 25288379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28844682 - 28844775
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||| ||||| ||||| |||||||  | ||||||||||||||| |||| ||||||||||||  |||||  ||||||||||||    
T  28844682 ttttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttcttgagattg--tttttcttttaa 28844775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 3463795 - 3463863
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||  ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  3463795 tggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttctt 3463863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26788913 - 26788969
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcat 57  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||    
T  26788913 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 26788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 6224633 - 6224576
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  6224633 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 28740370 - 28740283
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| | ||| ||||||| || ||||||||||||||| |||| ||||||||||||  |||||  ||||||||||||    
T  28740370 tggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattg--tttttcttttaa 28740283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 215303 - 215249
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttc 73  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||    
T  215303 ggattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttc 215249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 15114 - 15009
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  15114 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagatt 15015  T
Q  101 ttacta 106  Q
    ||||||    
T  15014 ttacta 15009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 15757 - 15652
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  15757 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagatt 15658  T
Q  101 ttacta 106  Q
    ||||||    
T  15657 ttacta 15652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 5e-46; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 19451889 - 19451784
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  19451889 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagatt 19451790  T
Q  101 ttacta 106  Q
    ||||||    
T  19451789 ttacta 19451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 49198350 - 49198245
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  49198350 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaggattgtttttttcttttaagatt 49198251  T
Q  101 ttacta 106  Q
    ||||||    
T  49198250 ttacta 49198245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 50192631 - 50192526
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  50192631 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattttttaggattgtttttttcttttaagatt 50192532  T
Q  101 ttacta 106  Q
    ||||||    
T  50192531 ttacta 50192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 21222266 - 21222371
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  21222266 ttttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttattttcttttaagatt 21222365  T
Q  101 ttacta 106  Q
    ||||||    
T  21222366 ttacta 21222371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 45760090 - 45759985
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  45760090 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttcttaggattgtttttttcttttaagatt 45759991  T
Q  101 ttacta 106  Q
    ||||||    
T  45759990 ttacta 45759985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 47780830 - 47780935
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  47780830 ttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattgtttttttcttttaagatt 47780929  T
Q  101 ttacta 106  Q
    ||||||    
T  47780930 ttacta 47780935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 28824454 - 28824349
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||    
T  28824454 ttttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatttcttaggattgtttttttcttttaagatt 28824355  T
Q  101 ttacta 106  Q
    ||||||    
T  28824354 ttacta 28824349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 47654432 - 47654327
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47654432 ttttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttaggattgtttttttcttttaagatt 47654333  T
Q  101 ttacta 106  Q
    ||||||    
T  47654332 ttacta 47654327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 31572278 - 31572174
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  31572278 ttttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtctttcatgaaatcatgagatttcttagaattgtttttttcttttaagatt 31572179  T
Q  101 ttact 105  Q
    |||||    
T  31572178 ttact 31572174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 6304333 - 6304227
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattg--gttttttcttttaaga 98  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||   |||||||||||||||    
T  6304333 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgattgtttttttttcttttaaga 6304234  T
Q  99 ttttact 105  Q
    |||||||    
T  6304233 ttttact 6304227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 35679209 - 35679102
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggt--tttttcttttaaga 98  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||| |  ||||||||||||||    
T  35679209 ttttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatttcttaagattgtttctttttcttttaaga 35679110  T
Q  99 ttttacta 106  Q
    ||||||||    
T  35679109 ttttacta 35679102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 9577513 - 9577411
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||||||  |||||||||||| |||    
T  9577513 ttttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaacatgagatttcttgggattg--tttttcttttaaaatt 9577416  T
Q  101 ttact 105  Q
    |||||    
T  9577415 ttact 9577411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 33025630 - 33025726
Alignment:
Q  9 gattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttacta 106  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||    
T  33025630 gattttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgatt-gtgttttcttttaagattttacta 33025726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 35279791 - 35279872
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 82  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||    
T  35279791 ttttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatttcttagaattg 35279872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 45536063 - 45536163
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcat------gaaaacatgagatttcttaggattggttttttctttt 94  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||      ||||||||||||||||||||||||| |||||||||||    
T  45536063 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacgaaaacatgagatttcttaggattgtttttttctttt 45536162  T
Q  95 a 95  Q
    |    
T  45536163 a 45536163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 29556223 - 29556328
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaa-acatgagatttcttaggattggttttttcttttaagat 99  Q
    |||||||||||||| |||||||||||| |||||||||| | ||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||    
T  29556223 ttttgatggattttatgggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagatttcttaggatt-gttttttcttttaagat 29556321  T
Q  100 tttacta 106  Q
    || ||||    
T  29556322 ttaacta 29556328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 37014721 - 37014622
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||| |||||  ||||||| ||||||||    
T  37014721 ttttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacatgagatttcttaagattg--tttttctcttaagatt 37014624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 32589034 - 32588936
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    ||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||     |||| ||||||||||||||||||    
T  32589034 ttttgatggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatgagattt-----gatt-gttttttcttttaagatt 32588941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 49418203 - 49418296
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttctttt 94  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||| |||||||||||||| |||  |||||| ||||    
T  49418203 ttttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgagatttcttagaattttttttttttttt 49418296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 48177543 - 48177450
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  48177543 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 48177450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 48524805 - 48524865
Alignment:
Q  45 aaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagattttact 105  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  48524805 aaaagtctttcatgaaaacatgagatttgttaggattggttttttcttttaagattttact 48524865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6312693 - 6312767
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  6312693 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6312767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 29396469 - 29396395
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  29396469 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29396395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 51701699 - 51701770
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagattt 72  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||    
T  51701699 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 51701770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9322581 - 9322507
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||| ||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  9322581 ttttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 9322507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 15835134 - 15835060
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||| ||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  15835134 ttttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 15835060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25612276 - 25612350
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||  ||||||| || |||||||||||||||||||| ||||||||||||    
T  25612276 ttttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatgagatttctt 25612350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 48524438 - 48524490
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctt 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48524438 ttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 48668860 - 48668773
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||| | ||||| ||||||| || |||||||||||||||||||| ||||||||| || ||||||  ||||||||||||    
T  48668860 tggattttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttgttgggattg--tttttcttttaa 48668773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 46328161 - 46328234
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttct 74  Q
    |||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| || ||||||||    
T  46328161 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataagatttct 46328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 28387474 - 28387400
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||  ||||||| ||  |||||||||||||| |||| ||||||||||||    
T  28387474 ttttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgagatttctt 28387400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 38536174 - 38536087
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  38536174 tggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 38536087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 38558392 - 38558305
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  38558392 tggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 38558305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 730268 - 730314
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaa 47  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  730268 ttttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 29219401 - 29219488
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| ||||| ||||||| || |||||||| ||||||||||| ||||||||||||  |||||  ||||||||||||    
T  29219401 tggattttgatggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattg--tttttcttttaa 29219488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 5495181 - 5495117
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatt 71  Q
    |||||||||||||||||| ||||| ||||||| || ||||||||| || ||||||| ||||||||    
T  5495181 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 18798607 - 18798663
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttct 74  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  18798607 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 18798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 730307 - 730357
Alignment:
Q  55 catgaaaacatgagatttcttaggattggttttttcttttaagattttacta 106  Q
    |||||||||||||||||||||||| ||  ||||| |||||||||||||||||    
T  730307 catgaaaacatgagatttcttagg-tttttttttccttttaagattttacta 730357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 45272700 - 45272787
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    ||||||||||| |||||| ||||| ||||||| || |||||| ||||| || |||| ||||||||| ||  |||||  ||||||||||||    
T  45272700 tggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagattttttgagattg--tttttcttttaa 45272787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 47784501 - 47784542
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaa 48  Q
    ||||||||||| ||||||||||| |||||||| |||||||||    
T  47784501 tggattttgtgagattttctagttaaattttagcatgaaaaa 47784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 7016819 - 7016714
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  7016819 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagaattgtttttttcttttaagatt 7016720  T
Q  101 ttacta 106  Q
    ||||||    
T  7016719 ttacta 7016714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 33656121 - 33656017
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  33656121 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggatt-gttttttcttttaagatt 33656023  T
Q  101 ttacta 106  Q
    ||||||    
T  33656022 ttacta 33656017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 21147193 - 21147294
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  21147193 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttc-tttaagatt 21147291  T
Q  101 tta 103  Q
    |||    
T  21147292 tta 21147294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 27459030 - 27458925
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  27459030 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatatttcttaggattgtttttttcttttaagatt 27458931  T
Q  101 ttacta 106  Q
    ||||||    
T  27458930 ttacta 27458925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 5272999 - 5272894
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||   ||| ||||| ||||||| |||    
T  5272999 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaattttgttttttacttttaaaatt 5272900  T
Q  101 ttacta 106  Q
    ||||||    
T  5272899 ttacta 5272894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 9689783 - 9689884
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||| |||| |||||||| || ||||||||| ||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||    
T  9689783 ttttgatggattgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataagatttcttatgatt-gttttttcttttaagatt 9689881  T
Q  101 tta 103  Q
    |||    
T  9689882 tta 9689884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 32157977 - 32157869
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaa---gtctttcatgaaaacatgagatttcttaggattggttttttcttttaag 97  Q
    |||||| |||||||||||||||||||||| |||||||| || ||||||   ||||||||||||||||||||||||||||  |||| | ||||||||||||    
T  32157977 ttttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaaacatgagatttcttaaaattgttcttttcttttaag 32157878  T
Q  98 attttacta 106  Q
    |||||||||    
T  32157877 attttacta 32157869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 139399 - 139504
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggatt-ggttttttcttttaagat 99  Q
    |||||||||||||||| |||||||| ||||||||||||  ||||||||||||||||| ||||||||||||||||||  |||   ||||||||||||||||    
T  139399 ttttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttcttaaaattattttttttcttttaagat 139498  T
Q  100 tttact 105  Q
    ||||||    
T  139499 tttact 139504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 1152183 - 1152090
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||| |||||  ||||||||||||    
T  1152183 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttcttaagattg--tttttcttttaa 1152090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 9220786 - 9220696
Alignment:
Q  12 tttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatttta 103  Q
    ||||| ||||||| |||| |||||||| || ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  9220786 tttgtaggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttcttaggatt-gttttttcttttaagatttta 9220696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 849273 - 849370
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatg-aaaacatgagatttcttaggattggttttttcttttaagat 99  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||         ||||||| ||||||||||||||||    
T  849273 ttttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaacatg---------aggattgtttttttcttttaagat 849363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14000185 - 14000111
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  14000185 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 14000111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39852471 - 39852545
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||| ||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  39852471 ttttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 39852545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7947653 - 7947579
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| | ||||||||||    
T  7947653 ttttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttctt 7947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13926057 - 13926131
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||| ||||| |||| |||||||    
T  13926057 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgatatttctt 13926131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 4550337 - 4550244
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttctttt 94  Q
    |||||||||||||||||| ||||| ||||| ||||||| || |||| ||||||||||||||| ||||||||| ||  ||||| |||||| ||||    
T  4550337 ttttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagatttgttgagattgtttttttttttt 4550244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6460918 - 6460965
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaa 48  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6460918 ttttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 5949230 - 5949317
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  5949230 tggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 5949317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 4240536 - 4240449
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| ||||| ||||||| || |||||||||||||||||| | ||||||||||||  |||||  ||||||||||||    
T  4240536 tggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaatagatgagatttcttgagattg--tttttcttttaa 4240449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 40013775 - 40013718
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  40013775 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40013718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 1461222 - 1461135
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| || || ||||||| || |||||| ||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  1461222 tggattttgatggattttgtactgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 1461135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 37014037 - 37014113
Alignment:
Q  18 ggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    ||||||| ||||  ||||||| || ||||||||||||||| |||| ||||||||||||  |||||  ||||||||||||    
T  37014037 ggattttgtagtataattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattg--tttttcttttaa 37014113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 6460966 - 6461008
Alignment:
Q  64 atgagatttcttaggattggttttttcttttaagattttacta 106  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||    
T  6460966 atgagatttcttaagattgttttttttttttaagattttacta 6461008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 1511426 - 1511330
Alignment:
Q  7 tggattttgtggga-ttttctagtgaaattttatcatg-aaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatttt 102  Q
    |||||||||||||| |||| ||||||  ||||  |||| ||||| ||||| |||||||||| |||||| |||||||| ||| |||||||||| |||||    
T  1511426 tggattttgtgggatttttttagtgagtttttggcatgaaaaaaatcttttatgaaaacataagattttttaggatt-gttatttcttttaaaatttt 1511330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 38976 - 38872
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  38976 ttttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggatt-gttttttcttttaagatt 38878  T
Q  101 ttacta 106  Q
    ||||||    
T  38877 ttacta 38872  T

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Target: scaffold0004 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 102221 - 102324
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaagatt 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||| ||||| |||||| ||||||||||    
T  102221 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttcttatgattgtttttttattttaagatt 102320  T
Q  101 ttac 104  Q
    ||||    
T  102321 ttac 102324  T

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Target: scaffold0037 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 100337 - 100444
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattg--gttttttcttttaaga 98  Q
    ||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||    
T  100337 ttttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttcttaggactgtttttttttcttttaaga 100436  T
Q  99 ttttacta 106  Q
    || |||||    
T  100437 ttgtacta 100444  T

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Target: scaffold0276 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 620 - 527
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttctttt 94  Q
    |||||||||||||||||| ||||||||||||||||||   |||||||||||||| | ||||||||||||||||||||||||  |||||| ||||    
T  620 ttttgatggattttgtggaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttcttaggattttttttttttttt 527  T

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Target: scaffold0347 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 14892 - 14979
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||| |||||  ||||||||||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattg--tttttcttttaa 14979  T

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Target: scaffold0110 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 39698 - 39605
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||  |||||  ||||||||||||    
T  39698 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagattg--tttttcttttaa 39605  T

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Target: scaffold0543 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10686 - 10760
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||| ||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  10686 ttttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 10760  T

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Target: scaffold0054 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36988 - 36914
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttctt 75  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  36988 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttctt 36914  T

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Target: scaffold1504 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 989 - 1077
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggtttttt 89  Q
    |||||||||||||||||||||||| ||||| ||||||| |  ||||||||||||||| |||| ||||||||||||  ||||| ||||||    
T  989 ttttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatatgagatttcttgagattgttttttt 1077  T

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Target: scaffold0042 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 58157 - 58064
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||||||| ||||  ||||||| || || ||| ||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  58157 ttttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 58064  T

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Target: scaffold0839 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3773 - 3712
Alignment:
Q  1 ttttgatggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaa 62  Q
    |||||||||||||||||||||||| ||||| ||||||| || ||||| ||||||||| ||||    
T  3773 ttttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaa 3712  T

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Target: scaffold0306 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 14004 - 14091
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| |||||  ||||||  | |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  14004 tggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 14091  T

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Target: scaffold0152 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 21323 - 21236
Alignment:
Q  7 tggattttgtgggattttctagtgaaattttatcatgaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||  ||||||| |||||  ||||||  | |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  21323 tggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 21236  T

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Target: scaffold0152; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 28510 - 28561
Alignment:
Q  43 gaaaaagtctttcatgaaaacatgagatttcttaggattggttttttcttttaa 96  Q
    |||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  28510 gaaaaagtctttcatgaaaagatgagatttcttgagattg--tttttcttttaa 28561  T

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