View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18347_high_9 (Length: 448)

Name: NF18347_high_9
Description: NF18347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18347_high_9
NF18347_high_9
[»] chr5 (48 HSPs)
chr5 (19-258)||(2591064-2591303)
chr5 (261-435)||(19359138-19359312)
chr5 (261-435)||(2865124-2865298)
chr5 (261-435)||(18183338-18183512)
chr5 (261-435)||(5819298-5819472)
chr5 (261-435)||(8647440-8647614)
chr5 (252-435)||(29455111-29455294)
chr5 (261-435)||(24362205-24362379)
chr5 (251-435)||(15708963-15709146)
chr5 (261-435)||(8460932-8461106)
chr5 (261-431)||(14215616-14215786)
chr5 (262-435)||(15372242-15372415)
chr5 (261-435)||(164560-164734)
chr5 (261-424)||(14463901-14464063)
chr5 (262-419)||(5818932-5819090)
chr5 (262-419)||(18182973-18183131)
chr5 (259-419)||(2864754-2864915)
chr5 (258-435)||(24331929-24332110)
chr5 (261-419)||(8647822-8647981)
chr5 (261-419)||(19359520-19359679)
chr5 (261-435)||(16018591-16018763)
chr5 (260-419)||(14215242-14215402)
chr5 (265-419)||(24361843-24361997)
chr5 (255-419)||(8461315-8461480)
chr5 (265-419)||(24325218-24325372)
chr5 (261-419)||(24331561-24331722)
chr5 (261-401)||(7349420-7349560)
chr5 (262-421)||(16018969-16019129)
chr5 (261-418)||(164193-164350)
chr5 (281-435)||(25000112-25000266)
chr5 (261-421)||(25000471-25000632)
chr5 (255-419)||(29454736-29454901)
chr5 (259-418)||(15371871-15372030)
chr5 (261-385)||(7348561-7348685)
chr5 (261-399)||(4623150-4623286)
chr5 (261-419)||(15709353-15709511)
chr5 (261-379)||(4222147-4222265)
chr5 (265-397)||(6019177-6019309)
chr5 (261-397)||(4219665-4219800)
chr5 (272-398)||(4624631-4624757)
chr5 (261-398)||(6018316-6018452)
chr5 (341-401)||(13814131-13814190)
chr5 (341-385)||(14462686-14462730)
chr5 (376-435)||(24325580-24325639)
chr5 (389-435)||(16752711-16752757)
chr5 (358-435)||(28495211-28495288)
chr5 (347-419)||(10721873-10721945)
chr5 (389-433)||(32305947-32305991)
[»] chr7 (33 HSPs)
chr7 (250-435)||(37786758-37786943)
chr7 (262-435)||(19830423-19830596)
chr7 (261-435)||(19590527-19590701)
chr7 (261-433)||(32004985-32005157)
chr7 (249-435)||(38858633-38858819)
chr7 (262-435)||(4641443-4641616)
chr7 (262-435)||(29100220-29100393)
chr7 (261-433)||(35289272-35289444)
chr7 (261-433)||(2659211-2659383)
chr7 (261-433)||(34534162-34534334)
chr7 (265-428)||(23953105-23953268)
chr7 (261-419)||(19590909-19591068)
chr7 (262-428)||(4478076-4478242)
chr7 (261-419)||(2658841-2659000)
chr7 (261-419)||(38859025-38859184)
chr7 (261-418)||(32004616-32004774)
chr7 (261-417)||(37787153-37787310)
chr7 (261-419)||(19830804-19830962)
chr7 (261-397)||(28583441-28583577)
chr7 (261-419)||(34533793-34533952)
chr7 (261-418)||(35288905-35289063)
chr7 (272-419)||(29099863-29100011)
chr7 (261-401)||(38160953-38161093)
chr7 (262-419)||(4641828-4641983)
chr7 (261-419)||(23952732-23952892)
chr7 (261-400)||(28584326-28584465)
chr7 (261-435)||(35579256-35579429)
chr7 (393-428)||(32427397-32427432)
chr7 (389-435)||(35579028-35579074)
chr7 (389-435)||(26026688-26026734)
chr7 (389-435)||(48247721-48247767)
chr7 (257-418)||(9393734-9393894)
chr7 (252-304)||(34594576-34594628)
[»] chr6 (36 HSPs)
chr6 (261-435)||(11276951-11277125)
chr6 (261-435)||(10900299-10900473)
chr6 (261-435)||(18257139-18257313)
chr6 (261-435)||(20741102-20741276)
chr6 (261-435)||(15828010-15828184)
chr6 (261-433)||(1149802-1149975)
chr6 (261-433)||(12935528-12935700)
chr6 (261-435)||(18505288-18505462)
chr6 (261-435)||(31470685-31470859)
chr6 (261-435)||(11444989-11445163)
chr6 (261-435)||(28472639-28472812)
chr6 (261-435)||(29859828-29860001)
chr6 (261-419)||(2319674-2319832)
chr6 (262-435)||(2322588-2322760)
chr6 (262-428)||(10899942-10900109)
chr6 (261-419)||(12935159-12935318)
chr6 (261-422)||(4811374-4811535)
chr6 (261-435)||(23074001-23074164)
chr6 (250-419)||(11445371-11445541)
chr6 (261-419)||(22219737-22219896)
chr6 (261-419)||(23075512-23075671)
chr6 (261-428)||(11276592-11276760)
chr6 (261-412)||(15827640-15827794)
chr6 (262-419)||(18504922-18505080)
chr6 (250-419)||(31470306-31470476)
chr6 (261-419)||(20741485-20741647)
chr6 (257-401)||(29033432-29033577)
chr6 (261-376)||(18257565-18257680)
chr6 (259-401)||(29035040-29035182)
chr6 (262-395)||(3835135-3835268)
chr6 (261-400)||(18296147-18296285)
chr6 (261-385)||(4811675-4811799)
chr6 (261-347)||(1149467-1149553)
chr6 (352-434)||(35163557-35163639)
chr6 (261-315)||(22534214-22534268)
chr6 (395-435)||(32836367-32836407)
[»] chr3 (61 HSPs)
chr3 (261-435)||(37726931-37727105)
chr3 (261-435)||(39555946-39556120)
chr3 (261-433)||(20840562-20840734)
chr3 (261-435)||(31779021-31779195)
chr3 (262-435)||(5136983-5137156)
chr3 (262-435)||(41046703-41046876)
chr3 (261-435)||(24300925-24301099)
chr3 (258-435)||(25853596-25853773)
chr3 (261-435)||(23644464-23644638)
chr3 (261-435)||(26837725-26837898)
chr3 (261-435)||(30104484-30104657)
chr3 (261-433)||(32535330-32535506)
chr3 (265-414)||(48452995-48453144)
chr3 (256-435)||(27393946-27394125)
chr3 (261-428)||(43973443-43973610)
chr3 (256-435)||(17464860-17465040)
chr3 (263-435)||(22425182-22425354)
chr3 (262-435)||(26274936-26275108)
chr3 (261-419)||(31778655-31778814)
chr3 (261-419)||(37727314-37727473)
chr3 (261-419)||(43973824-43973983)
chr3 (255-419)||(27393657-27393822)
chr3 (261-419)||(20840945-20841104)
chr3 (261-419)||(25853236-25853395)
chr3 (261-419)||(39555580-39555739)
chr3 (262-400)||(25612381-25612519)
chr3 (261-419)||(4275748-4275907)
chr3 (261-419)||(5137365-5137524)
chr3 (249-419)||(30098147-30098318)
chr3 (261-421)||(29801798-29801959)
chr3 (261-419)||(17464493-17464652)
chr3 (262-419)||(26837363-26837521)
chr3 (262-419)||(32534962-32535120)
chr3 (261-401)||(50116812-50116952)
chr3 (261-419)||(22424816-22424975)
chr3 (261-419)||(23644849-23645008)
chr3 (261-380)||(29801358-29801477)
chr3 (262-419)||(26274570-26274728)
chr3 (262-419)||(24300560-24300717)
chr3 (261-400)||(51474737-51474877)
chr3 (261-398)||(23228414-23228550)
chr3 (261-397)||(45965940-45966076)
chr3 (261-399)||(32697106-32697243)
chr3 (262-419)||(41047083-41047239)
chr3 (258-403)||(25420542-25420687)
chr3 (261-373)||(51473430-51473542)
chr3 (261-400)||(37220559-37220698)
chr3 (278-387)||(18010162-18010271)
chr3 (265-400)||(25419150-25419285)
chr3 (337-401)||(23227334-23227398)
chr3 (261-345)||(37222030-37222114)
chr3 (389-436)||(49407925-49407972)
chr3 (364-435)||(55192222-55192293)
chr3 (375-435)||(29801532-29801592)
chr3 (352-435)||(37075781-37075864)
chr3 (261-435)||(27200062-27200235)
chr3 (258-435)||(36701466-36701643)
chr3 (250-435)||(50900898-50901082)
chr3 (395-429)||(33412383-33412417)
chr3 (395-435)||(27199838-27199878)
chr3 (262-386)||(32695706-32695830)
[»] chr1 (46 HSPs)
chr1 (261-435)||(18984121-18984295)
chr1 (261-435)||(50970647-50970821)
chr1 (262-435)||(15173099-15173272)
chr1 (251-435)||(29869612-29869796)
chr1 (262-435)||(5962947-5963120)
chr1 (259-435)||(33144288-33144464)
chr1 (261-428)||(5540194-5540361)
chr1 (253-428)||(15646571-15646746)
chr1 (261-428)||(29306955-29307122)
chr1 (261-435)||(21856412-21856586)
chr1 (261-435)||(8678911-8679084)
chr1 (261-435)||(9018975-9019149)
chr1 (261-435)||(17433218-17433392)
chr1 (258-435)||(39154018-39154195)
chr1 (261-433)||(26859431-26859602)
chr1 (261-428)||(29307317-29307485)
chr1 (258-419)||(21856041-21856203)
chr1 (258-421)||(17433597-17433761)
chr1 (261-419)||(8678543-8678702)
chr1 (261-419)||(39154404-39154563)
chr1 (261-417)||(50970280-50970437)
chr1 (261-419)||(5539818-5539977)
chr1 (261-419)||(29870003-29870162)
chr1 (261-418)||(4636356-4636514)
chr1 (255-419)||(18984503-18984668)
chr1 (267-419)||(33143925-33144078)
chr1 (261-419)||(15173478-15173636)
chr1 (261-428)||(9019338-9019506)
chr1 (261-419)||(15646194-15646353)
chr1 (254-399)||(52268285-52268430)
chr1 (261-376)||(26859061-26859176)
chr1 (332-433)||(4636045-4636146)
chr1 (261-419)||(5962580-5962739)
chr1 (258-375)||(52269177-52269294)
chr1 (261-419)||(17112284-17112442)
chr1 (251-334)||(47826956-47827039)
chr1 (261-345)||(2733416-2733500)
chr1 (267-359)||(47827033-47827125)
chr1 (395-429)||(17088516-17088550)
chr1 (262-435)||(39485068-39485240)
chr1 (352-435)||(17088243-17088326)
chr1 (299-386)||(39843193-39843280)
chr1 (358-435)||(9833522-9833599)
chr1 (338-435)||(29020959-29021056)
chr1 (295-340)||(50419725-50419770)
chr1 (295-399)||(52235074-52235178)
[»] chr4 (61 HSPs)
chr4 (255-435)||(33109680-33109860)
chr4 (257-435)||(46193774-46193952)
chr4 (250-435)||(4219548-4219733)
chr4 (256-435)||(15523603-15523782)
chr4 (261-435)||(12234331-12234505)
chr4 (258-428)||(38962195-38962365)
chr4 (261-435)||(11153516-11153690)
chr4 (261-429)||(25447611-25447779)
chr4 (257-435)||(23494441-23494619)
chr4 (261-435)||(25937672-25937846)
chr4 (261-435)||(51020799-51020973)
chr4 (262-435)||(22434547-22434718)
chr4 (261-435)||(22170306-22170479)
chr4 (262-435)||(45082435-45082606)
chr4 (261-435)||(48526198-48526371)
chr4 (262-435)||(2118665-2118837)
chr4 (262-435)||(54995437-54995609)
chr4 (261-419)||(22434181-22434340)
chr4 (261-419)||(45082808-45082967)
chr4 (261-421)||(46193407-46193568)
chr4 (261-419)||(25447249-25447408)
chr4 (261-418)||(15523237-15523395)
chr4 (262-419)||(48526565-48526723)
chr4 (328-435)||(12503805-12503912)
chr4 (261-375)||(23494872-23494986)
chr4 (257-419)||(2118291-2118454)
chr4 (261-419)||(11153148-11153307)
chr4 (261-419)||(12234713-12234872)
chr4 (261-419)||(20470895-20471054)
chr4 (262-419)||(4219943-4220101)
chr4 (262-419)||(54995072-54995230)
chr4 (261-385)||(33109883-33110007)
chr4 (250-418)||(25938056-25938225)
chr4 (261-419)||(51021180-51021338)
chr4 (262-419)||(18751602-18751760)
chr4 (261-400)||(48293596-48293735)
chr4 (261-401)||(20958264-20958402)
chr4 (258-373)||(18763951-18764066)
chr4 (262-395)||(16690939-16691072)
chr4 (276-419)||(12503453-12503597)
chr4 (261-400)||(44892552-44892691)
chr4 (261-376)||(35363028-35363144)
chr4 (261-400)||(48294946-48295086)
chr4 (266-397)||(20957196-20957327)
chr4 (277-400)||(43243685-43243807)
chr4 (262-401)||(48713749-48713888)
chr4 (261-395)||(48708297-48708431)
chr4 (277-397)||(43281198-43281317)
chr4 (261-400)||(44890519-44890658)
chr4 (261-395)||(16691481-16691614)
chr4 (256-385)||(10258306-10258435)
chr4 (368-435)||(18751971-18752038)
chr4 (252-435)||(17503967-17504149)
chr4 (317-400)||(43242328-43242411)
chr4 (261-324)||(16318256-16318319)
chr4 (395-435)||(17504329-17504369)
chr4 (395-435)||(35193443-35193483)
chr4 (328-400)||(44220781-44220853)
chr4 (261-367)||(55189530-55189636)
chr4 (402-435)||(40160236-40160269)
chr4 (261-341)||(35193766-35193846)
[»] chr2 (37 HSPs)
chr2 (262-433)||(11090524-11090695)
chr2 (247-435)||(26538085-26538273)
chr2 (262-432)||(14432145-14432315)
chr2 (255-435)||(40027136-40027316)
chr2 (261-435)||(239355-239528)
chr2 (262-435)||(40815714-40815887)
chr2 (261-435)||(18451200-18451374)
chr2 (261-435)||(22374322-22374496)
chr2 (261-435)||(1978110-1978284)
chr2 (262-428)||(8425736-8425902)
chr2 (261-435)||(43058335-43058509)
chr2 (261-433)||(28616615-28616788)
chr2 (265-435)||(3025472-3025641)
chr2 (261-428)||(26538454-26538622)
chr2 (261-433)||(7446344-7446519)
chr2 (261-419)||(7446730-7446889)
chr2 (261-419)||(40815347-40815506)
chr2 (261-400)||(20444751-20444890)
chr2 (261-419)||(18450832-18450991)
chr2 (258-401)||(15551498-15551641)
chr2 (261-419)||(22374709-22374868)
chr2 (262-419)||(40027524-40027682)
chr2 (261-376)||(28847123-28847238)
chr2 (261-400)||(35779710-35779849)
chr2 (261-400)||(35781067-35781206)
chr2 (251-419)||(28616998-28617167)
chr2 (261-419)||(239736-239895)
chr2 (261-419)||(11090904-11091063)
chr2 (261-400)||(20440436-20440574)
chr2 (261-419)||(43058717-43058875)
chr2 (261-418)||(3025848-3026004)
chr2 (259-400)||(8972237-8972378)
chr2 (261-385)||(1978528-1978652)
chr2 (262-418)||(8425358-8425514)
chr2 (261-419)||(14432525-14432684)
chr2 (259-399)||(15552459-15552598)
chr2 (261-435)||(28143400-28143573)
[»] scaffold0295 (2 HSPs)
scaffold0295 (261-435)||(4795-4969)
scaffold0295 (259-419)||(5179-5336)
[»] scaffold0273 (2 HSPs)
scaffold0273 (261-435)||(4576-4750)
scaffold0273 (298-419)||(4242-4364)
[»] scaffold0007 (3 HSPs)
scaffold0007 (253-435)||(64296-64478)
scaffold0007 (262-374)||(64735-64847)
scaffold0007 (254-435)||(205738-205918)
[»] chr8 (33 HSPs)
chr8 (261-435)||(19176659-19176833)
chr8 (250-435)||(9930026-9930211)
chr8 (252-435)||(12571856-12572040)
chr8 (261-432)||(41681136-41681306)
chr8 (261-435)||(44831614-44831788)
chr8 (262-435)||(33328161-33328334)
chr8 (263-435)||(13224645-13224816)
chr8 (261-435)||(31133222-31133396)
chr8 (261-433)||(11656457-11656630)
chr8 (261-435)||(9178005-9178178)
chr8 (261-419)||(13225023-13225182)
chr8 (262-419)||(9928912-9929070)
chr8 (261-419)||(19176292-19176451)
chr8 (255-419)||(44831243-44831408)
chr8 (262-435)||(4630161-4630328)
chr8 (250-419)||(11656841-11657011)
chr8 (262-419)||(12572235-12572393)
chr8 (261-417)||(34540934-34541091)
chr8 (261-419)||(33328524-33328683)
chr8 (306-433)||(33743290-33743417)
chr8 (261-419)||(41681518-41681677)
chr8 (261-418)||(31133605-31133763)
chr8 (261-419)||(33742924-33743082)
chr8 (261-413)||(4629799-4629952)
chr8 (261-367)||(11336959-11337065)
chr8 (262-397)||(10918129-10918264)
chr8 (338-400)||(43958264-43958326)
chr8 (261-400)||(8073956-8074094)
chr8 (351-419)||(9177724-9177793)
chr8 (389-434)||(18805292-18805337)
chr8 (250-290)||(10919700-10919740)
chr8 (261-291)||(9177669-9177699)
chr8 (258-304)||(43958208-43958254)
[»] scaffold0951 (2 HSPs)
scaffold0951 (261-433)||(1669-1841)
scaffold0951 (261-419)||(2051-2210)
[»] scaffold0019 (1 HSPs)
scaffold0019 (261-435)||(134042-134216)
[»] scaffold1223 (2 HSPs)
scaffold1223 (258-435)||(752-928)
scaffold1223 (261-428)||(1116-1284)
[»] scaffold0432 (2 HSPs)
scaffold0432 (262-435)||(10242-10414)
scaffold0432 (257-366)||(9930-10039)
[»] scaffold0027 (2 HSPs)
scaffold0027 (261-435)||(42528-42701)
scaffold0027 (262-428)||(42172-42339)
[»] scaffold0417 (2 HSPs)
scaffold0417 (278-435)||(10640-10797)
scaffold0417 (261-419)||(11007-11166)
[»] scaffold0176 (2 HSPs)
scaffold0176 (251-426)||(18827-19001)
scaffold0176 (261-356)||(19069-19164)
[»] scaffold0157 (2 HSPs)
scaffold0157 (328-435)||(16565-16672)
scaffold0157 (276-419)||(16880-17024)
[»] scaffold0113 (1 HSPs)
scaffold0113 (263-385)||(28662-28784)
[»] scaffold0057 (2 HSPs)
scaffold0057 (262-400)||(61862-62000)
scaffold0057 (261-333)||(61030-61102)
[»] scaffold1585 (1 HSPs)
scaffold1585 (261-401)||(569-709)
[»] scaffold0076 (1 HSPs)
scaffold0076 (262-362)||(8451-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (263-400)||(454-589)
[»] scaffold0168 (1 HSPs)
scaffold0168 (308-401)||(7691-7784)


Alignment Details
Target: chr5 (Bit Score: 236; Significance: 1e-130; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 19 - 258
Target Start/End: Original strand, 2591064 - 2591303
Alignment:
Q  19 gttcttgccaactgagctaagctcacatgacactacctatcttcctccaccaatcaagcattttgatttattcccttgttgtgtaatatgaatttttgga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2591064 gttcttgccaactgagctaagctcacatgacactacctatcttcctccaccaatcaagcattttgatttattcccttgttgtgtaatatgaatttttgga 2591163  T
Q  119 aagtatgaaaccctttgaaatctggaataaattaaaaagcatgatatcaatattaggtaaagaaatggactagaaatatatttgtgaatactagctaagc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2591164 aagtatgaaaccctttgaaatctggaataaattaaaaagcatgatatcaatattaggtaaagaaatggactagaaatatatttgtgaatactagctaggc 2591263  T
Q  219 ctagctacatgatattattagctcaatattgtaaaattaa 258  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2591264 ctagctacatgatattattagctcaatattgtaaaattaa 2591303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 19359138 - 19359312
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19359138 cttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttg 19359237  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19359238 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccccctatgct 19359312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 2865298 - 2865124
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||     
T  2865298 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttt 2865199  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2865198 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 18183512 - 18183338
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  18183512 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 18183413  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18183412 catttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 18183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 5819472 - 5819298
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  5819472 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 5819373  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  5819372 catttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccccctatgct 5819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 8647440 - 8647614
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| | ||||||| |||||||||||||||||||||||||    
T  8647440 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgttg 8647539  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8647540 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 8647614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 252 - 435
Target Start/End: Complemental strand, 29455294 - 29455111
Alignment:
Q  252 aaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatca 351  Q
    |||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  29455294 aaattaaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatca 29455195  T
Q  352 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | ||||||    
T  29455194 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacctcatatgct 29455111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 24362379 - 24362205
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||||||||||    
T  24362379 cttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttgttg 24362280  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  24362279 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacttatcccctatgct 24362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 251 - 435
Target Start/End: Original strand, 15708963 - 15709146
Alignment:
Q  251 aaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatc 350  Q
    |||||| || ||||||||||||||||||||| |||||||||  ||||||||||||||||  ||||||||||||| | |||||||||||||||||||||||    
T  15708963 aaaatttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatc 15709062  T
Q  351 atttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15709063 atttttgttgcatatttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15709146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 8460932 - 8461106
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||| ||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  8460932 cttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 8461031  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8461032 catttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 261 - 431
Target Start/End: Complemental strand, 14215786 - 14215616
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| |||||||||||||||||||   |||||||||||||| |||||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  14215786 cttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 14215687  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccccta 431  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14215686 catttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 14215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 262 - 435
Target Start/End: Complemental strand, 15372415 - 15372242
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  15372415 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 15372316  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||| || ||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||    
T  15372315 attttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacctcttatgct 15372242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 164734 - 164560
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| | ||||| ||||| ||||||||   |||||| ||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  164734 cttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 164635  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  164634 cattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 261 - 424
Target Start/End: Complemental strand, 14464063 - 14463901
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||  |  || |||||||||||| ||||||||| ||||||||||||||||||| |||    
T  14464063 cttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcatttttattg 14463964  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 424  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14463963 catttttcgtccta-ccccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 5818932 - 5819090
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  5818932 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 5819031  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||| |||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  5819032 atttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 18182973 - 18183131
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  18182973 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183072  T
Q  362 atttttcgtcctacccccca-ttttattctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||| || | |||||| | ||| |||||||||||||||||||||||||    
T  18183073 atttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 2864754 - 2864915
Alignment:
Q  259 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 358  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||| || || ||||||||||||| |||||||||||||||||||||||||||||||||    
T  2864754 gacttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 2864853  T
Q  359 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  2864854 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 258 - 435
Target Start/End: Complemental strand, 24332110 - 24331929
Alignment:
Q  258 agacttaattacactttt-ggtcctcgtgttttggtttactcacgaaactggtcctgccctttt-aaaatataacaaaacggtccttcaattatcatttt 355  Q
    |||||||||||||||||| |||| || ||||||||  |||||||||||||| ||||||| |||| |||| | |||||||||||||| |||||||||||||    
T  24332110 agacttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcatttt 24332011  T
Q  356 t-gttgcattttt-cgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    | ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24332010 ttgttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 8647981 - 8647822
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  8647981 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 8647882  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||| ||||  | ||||| |  ||||| |||||||||||||||||||||||||    
T  8647881 catttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 19359679 - 19359520
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  19359679 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 19359580  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
     ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  19359579 gatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 16018591 - 16018763
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||| |||||||||||  || |||||||| || || ||||||||||||||| |||||||||||||||||||||| |||||| |||    
T  16018591 cttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-atttttattg 16018689  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||| ||||||| ||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||    
T  16018690 cattttccgtccta-cccccattttattctccaaaaatatagaaaaatgacagttttagacctaccccctatgct 16018763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 14215242 - 14215402
Alignment:
Q  260 acttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgtt 359  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||| | ||||||| ||||||||| ||||||||||||||    
T  14215242 acttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgtt 14215341  T
Q  360 gcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  14215342 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 265 - 419
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  265 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatt 364  Q
    |||||||||||||||| | ||||||||  ||| |||||||||| || ||||||| ||||| | ||||||| |||||||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  365 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 8461480 - 8461315
Alignment:
Q  255 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 354  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||||||| | |||||||||||||||||||||||||||    
T  8461480 ttaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcattt 8461381  T
Q  355 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||| ||||||||||||| |||| || ||||| |  ||||| |||||||||||||||||| ||||||    
T  8461380 ttgctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 265 - 419
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  265 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatt 364  Q
    |||||||||||||||| | ||||||||  ||| |||||||||| || ||||||| ||||| | ||||||| |||||||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  365 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 24331561 - 24331722
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatc--atttttgt 358  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||   |||||||    
T  24331561 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttttgt 24331660  T
Q  359 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||| ||||| | || ||||| |  ||||| |||||||||||||||||||||||||    
T  24331661 tgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 261 - 401
Target Start/End: Complemental strand, 7349560 - 7349420
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||| | ||||||||  ||||||| |||||||||||||||    
T  7349560 cttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgttg 7349461  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgca 401  Q
    || ||||| |||||||||||||||| | |||||||||||||    
T  7349460 cacttttcatcctaccccccattttttcctccaaaaacgca 7349420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 262 - 421
Target Start/End: Complemental strand, 16019129 - 16018969
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||| ||||||||  ||||||||||| ||||||||| ||||||||||| || |||| ||| |||||||||||||||||||||     
T  16019129 ttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttgttgt 16019030  T
Q  362 atttttcgtcctacccccca-ttttattctccaaaaacgcagagaaatgacagttttagac 421  Q
    ||||||||||||||| || | |||||  ||||| |||||||||||||||||||||||||||    
T  16019029 atttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 261 - 418
Target Start/End: Original strand, 164193 - 164350
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| || | |||||||||||| ||||||||||| ||||||||    
T  164193 cttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgttg 164291  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 418  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||| |||||    
T  164292 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 281 - 435
Target Start/End: Original strand, 25000112 - 25000266
Alignment:
Q  281 tcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacccccc 380  Q
    |||||||||||  ||||||||||  ||||| |||||| |||||| | || |||| ||||||| ||||||||||||| |||||||||| ||||||||||||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  381 attttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| | ||||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatctacctcatatgct 25000266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 261 - 421
Target Start/End: Complemental strand, 25000632 - 25000471
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||| || ||||||||  ||||||||||| ||||| ||  ||||||||| | ||||||| |||| ||||||||||||||||||||    
T  25000632 cttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttgttg 25000533  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 421  Q
    |||||||||||| ||| || ||||| |  |||||||||||||||||||||||||||||||||    
T  25000532 catttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 29454736 - 29454901
Alignment:
Q  255 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 354  Q
    ||||| ||||||| ||||||||||| | |||||||||  ||||||||||| ||||| ||||||||||||| | ||||||||||||||| |||||||||||    
T  29454736 ttaaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcattt 29454835  T
Q  355 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||| |||||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  29454836 ttgctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 259 - 418
Target Start/End: Original strand, 15371871 - 15372030
Alignment:
Q  259 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 358  Q
    |||||||||||||||||| ||||||| ||||||| ||||||||||  ||||||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  15371871 gacttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 15371969  T
Q  359 tgcatttttcgtcctaccccccattt-tattctccaaaaacgcagagaaatgacagtttta 418  Q
    |||||||||||||| ||| || ||||  |  ||| | |||||||||||||||| |||||||    
T  15371970 tgcatttttcgtcccacctcctatttgcaaactctagaaacgcagagaaatgatagtttta 15372030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 261 - 385
Target Start/End: Original strand, 7348561 - 7348685
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| ||||||||||| |||||| || ||||||||||| ||||| ||||||||||||| | ||||||||  ||||||  |||||||||||||||    
T  7348561 cttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgttg 7348660  T
Q  361 catttttcgtcctaccccccatttt 385  Q
    || ||||||||||||||||||||||    
T  7348661 cacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 261 - 399
Target Start/End: Original strand, 4623150 - 4623286
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||| ||||||||||  |||||||||||| ||||||||||  ||||||| | |||||||  |||||||||||||||||||| | |    
T  4623150 cttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttatgg 4623249  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacg 399  Q
    |||||| |||||||  ||||||||||| |||||||||||    
T  4623250 cattttccgtccta--ccccattttatcctccaaaaacg 4623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 15709511 - 15709353
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||| | |||||||||  |||||| |||||| ||| |||||||| |||| | ||||||||||||||| | ||||||||| |||||    
T  15709511 cttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgttg 15709413  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| || ||||||||||||||||||||||    
T  15709412 catttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 261 - 379
Target Start/End: Complemental strand, 4222265 - 4222147
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||| ||||||||||||| | |||||||  ||| |||| ||||||||||| |||    
T  4222265 cttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttattg 4222166  T
Q  361 catttttcgtcctaccccc 379  Q
    |||||||||||||||||||    
T  4222165 catttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 397
Target Start/End: Complemental strand, 6019309 - 6019177
Alignment:
Q  265 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcat- 363  Q
    |||||| |||||||| || |||||||| | ||||||||||||| || ||| ||||||||| | |||||||| ||| || ||||||||||||||||||||     
T  6019309 attacatttttggtcatcatgttttggct-actcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  364 ttttcgtcctaccccccattttattctccaaaaa 397  Q
    ||||||||||||| |||||||||| |||||||||    
T  6019210 ttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 261 - 397
Target Start/End: Original strand, 4219665 - 4219800
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| ||||||||||||||  || | || ||| ||||| |||| |||||||| | ||||||   |||||| | |||||||||||||||    
T  4219665 cttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgttg 4219764  T
Q  361 catttttcgtcctaccccccattttattctccaaaaa 397  Q
    |||||||||||||| |||||||||||| |||||||||    
T  4219765 catttttcgtccta-cccccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 272 - 398
Target Start/End: Complemental strand, 4624757 - 4624631
Alignment:
Q  272 ttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtc 371  Q
    |||| |||||||||||||    ||||||||||| ||||| || |  ||||||| ||||||||||  || |||||||||||||| ||||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  372 ctaccccccattttattctccaaaaac 398  Q
    |||||||||||||||| || |||||||    
T  4624657 ctaccccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 398
Target Start/End: Original strand, 6018316 - 6018452
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| ||||||| ||||||||||| | ||||||||||||||||| || |||||||||| | |||||||   | |||||||||||||||||||||    
T  6018316 cttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgttg 6018414  T
Q  361 catttttcgtcctaccccccattttattctccaaaaac 398  Q
    || |||| ||||||||| | |||||   ||||||||||    
T  6018415 cagttttagtcctaccctctattttcacctccaaaaac 6018452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 341 - 401
Target Start/End: Complemental strand, 13814190 - 13814131
Alignment:
Q  341 ttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgca 401  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  13814190 ttcaattatcatttttgttgcacttttcgtcctac-ccccattttatcctccaaaaacgca 13814131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 14462686 - 14462730
Alignment:
Q  341 ttcaattatcatttttgttgcatttttcgtcctaccccccatttt 385  Q
    |||||||||||||||||||||||||||||||||||| || |||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctatttt 14462730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 376 - 435
Target Start/End: Complemental strand, 24325639 - 24325580
Alignment:
Q  376 cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||| ||   |||||||||||||||||||||| || ||||||||||    
T  24325639 cccccattttattctccagaagtacagagaaatgacagttttagacttatcccctatgct 24325580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 16752711 - 16752757
Alignment:
Q  389 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  16752711 ctccataaacgcaaagaaatgatagttttagacctaccccctatgct 16752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 435
Target Start/End: Complemental strand, 28495288 - 28495211
Alignment:
Q  358 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||| |||| |||||||| || |||||   ||||| || ||||||||||||| ||||||||||||||| | ||||||    
T  28495288 ttgcagttttagtcctacctcctattttcaactccagaaccgcagagaaatgatagttttagacctacctcatatgct 28495211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 419
Target Start/End: Original strand, 10721873 - 10721945
Alignment:
Q  347 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||| ||| ||||| |||| |||||||| || |||||   ||||| ||||| |||||||||||||||||||    
T  10721873 tatcatgttttttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 433
Target Start/End: Original strand, 32305947 - 32305991
Alignment:
Q  389 ctccaaaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    ||||| |||| |||||||||||||||||||||| ||||| |||||    
T  32305947 ctccagaaacacagagaaatgacagttttagacttacccgctatg 32305991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 3e-86; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 250 - 435
Target Start/End: Original strand, 37786758 - 37786943
Alignment:
Q  250 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 349  Q
    |||||| ||| |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37786758 taaaataaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattat 37786857  T
Q  350 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37786858 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 262 - 435
Target Start/End: Original strand, 19830423 - 19830596
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  19830423 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19830522  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19830523 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 19830596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 19590527 - 19590701
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  19590527 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 19590626  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19590627 catttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccccctatgct 19590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 261 - 433
Target Start/End: Complemental strand, 32005157 - 32004985
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  32005157 cttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgttg 32005058  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32005057 catttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 32004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 249 - 435
Target Start/End: Original strand, 38858633 - 38858819
Alignment:
Q  249 gtaaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaatta 348  Q
    ||||||| ||| |||||| ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| | |||||||||||| ||||||||    
T  38858633 gtaaaataaaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaatta 38858732  T
Q  349 tcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38858733 tcatttttgttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccactatgct 38858819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 262 - 435
Target Start/End: Original strand, 4641443 - 4641616
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  4641543 atttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgccccctatgct 4641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 262 - 435
Target Start/End: Complemental strand, 29100393 - 29100220
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29100293 attttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 29100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 261 - 433
Target Start/End: Complemental strand, 35289444 - 35289272
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  35289444 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttggttg 35289345  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  35289344 catttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccccctatg 35289272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 261 - 433
Target Start/End: Complemental strand, 2659383 - 2659211
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| |||||||||||| |||||||  || ||| |||||||||| ||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  2659383 cttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 2659284  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2659283 catttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 2659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 261 - 433
Target Start/End: Complemental strand, 34534334 - 34534162
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| ||||||||| ||||||||||||  |||||||||||||| |||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  34534334 cttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttgttg 34534235  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  34534234 catttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctaccacctatg 34534162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 265 - 428
Target Start/End: Complemental strand, 23953268 - 23953105
Alignment:
Q  265 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatt 364  Q
    |||||| ||||||||||||||||||| | |||||||||||||||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  365 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacatacccc 23953105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 19591068 - 19590909
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  19591068 cttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 19590969  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  19590968 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 262 - 428
Target Start/End: Complemental strand, 4478242 - 4478076
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    |||| |||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| | || || |  |||||||||||||||||||||||||    
T  4478242 ttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgttgc 4478143  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    |||||||||| || ||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4478142 atttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctacccc 4478076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 2658841 - 2659000
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  2658841 cttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 2658940  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||| |||| || ||||| |  ||||||||||||||||||||| |||||||||    
T  2658941 catttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 38859184 - 38859025
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||    
T  38859184 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttg 38859085  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  38859084 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 261 - 418
Target Start/End: Original strand, 32004616 - 32004774
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||| || |||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  32004616 cttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 32004715  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 418  Q
    ||||||||| |||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  32004716 catttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 261 - 417
Target Start/End: Complemental strand, 37787310 - 37787153
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||||||||||| ||||||||  | ||||||||||| |||||||||||||||||||||    
T  37787310 cttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttgttg 37787211  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttt 417  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||    
T  37787210 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 19830962 - 19830804
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||    
T  19830962 cttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttgttg 19830863  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||| |||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  19830862 cattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 261 - 397
Target Start/End: Original strand, 28583441 - 28583577
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||| || | |||| |||||||||||||| |||| ||||| |||||||||||||||||||| |||    
T  28583441 cttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcatttttattg 28583540  T
Q  361 catttttcgtcctaccccccattttattctccaaaaa 397  Q
    ||||||||||||||||||||||||||| |||||||||    
T  28583541 catttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 34533793 - 34533952
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||| | || |||| |||| ||||||||||||||||||||    
T  34533793 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttgttg 34533892  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||| ||||||||| || ||||| |  |||||||||||||||||||||||| ||||||    
T  34533893 cattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 261 - 418
Target Start/End: Original strand, 35288905 - 35289063
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  35288905 cttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 35289004  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 418  Q
    |||||||||||||||  |  ||||| |  ||||| |||| |||||||||||||||||||    
T  35289005 catttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagtttta 35289063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 272 - 419
Target Start/End: Original strand, 29099863 - 29100011
Alignment:
Q  272 ttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtc 371  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  372 ctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||| || ||||| |  | ||| ||||| ||| |||||||||||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttag 29100011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 261 - 401
Target Start/End: Original strand, 38160953 - 38161093
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||||| |||||||  ||||||||||| |  |||||||||||||||| | |||||||  ||||||||||||| ||||||||||    
T  38160953 cttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttgttg 38161052  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgca 401  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  38161053 catttttcgtcctactccccattttatcctccaaaaacgca 38161093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 262 - 419
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  |||||||   |||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    || |||||||||||  || ||||| |  ||| | |||||||||||||||||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 23952732 - 23952892
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtt-tactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgtt 359  Q
    ||||||||||||||||||||||||||||||    ||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||||| |||    
T  23952732 cttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttggtt 23952831  T
Q  360 gcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||||  | ||||| |  | ||| |||||||||||||||| ||||||||    
T  23952832 gcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttag 23952892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 261 - 400
Target Start/End: Complemental strand, 28584465 - 28584326
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||| ||||||||| |||||  || |||||||| ||||| || |||||||||| | |||||||  ||||||||||||||||||||||||    
T  28584465 cttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgttg 28584366  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgc 400  Q
     |||||||||| ||||||||||||||| ||||||||||||    
T  28584365 tatttttcgtcttaccccccattttatcctccaaaaacgc 28584326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 35579429 - 35579256
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| ||||||  ||||| |   ||||||||| || |  ||||  ||| ||||  |||||||| |||||  || |||||| ||| |||    
T  35579429 cttaattacacttttgatcctcgcattttgatcagctcacgaaaatgattatgcctctttcaaatcaaacaaaaccgtccta-aactatcatgttttttg 35579331  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    || |||| ||| |||| || |||||   ||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  35579330 cagttttagtcatacctcctattttcaactctaaaaacgcagggaaataacagttttagacctaccccctatgct 35579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 393 - 428
Target Start/End: Complemental strand, 32427432 - 32427397
Alignment:
Q  393 aaaaacgcagagaaatgacagttttagacctacccc 428  Q
    ||||||||||||||||||||||||||||||||||||    
T  32427432 aaaaacgcagagaaatgacagttttagacctacccc 32427397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 35579028 - 35579074
Alignment:
Q  389 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  35579028 ctccagaaacgcagagaaatgacatttttagacctatcccctatgct 35579074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 26026734 - 26026688
Alignment:
Q  389 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||| ||||||||||||||||| || ||| ||||||||    
T  26026734 ctccaaaaacgcatagaaatgacagttttagtccaaccacctatgct 26026688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 48247721 - 48247767
Alignment:
Q  389 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||| ||||||||||||||||| || ||| ||||||||    
T  48247721 ctccaaaaacgcacagaaatgacagttttagtccaaccacctatgct 48247767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 418
Target Start/End: Original strand, 9393734 - 9393894
Alignment:
Q  257 aagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 356  Q
    |||||||||||||||||||| ||||||  ||||| |   ||||||||| | ||| ||||  ||| ||||  |||||||| |||| | || |||||| |||    
T  9393734 aagacttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtcc-taaactatcatgttt 9393832  T
Q  357 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagtttta 418  Q
     ||||  |||| |||||||| || |||||   ||||| |||| ||| |||||||||||||||    
T  9393833 tttgctgttttagtcctacctcctattttcaactccagaaacacagtgaaatgacagtttta 9393894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 34594576 - 34594628
Alignment:
Q  252 aaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaa 304  Q
    |||| |||||||||||||||||||||||||||  |||||  | ||||||||||    
T  34594576 aaataaagacttaattacacttttggtcctcgcattttgactaactcacgaaa 34594628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 4e-82; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 11277125 - 11276951
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  11277125 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttg 11277026  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11277025 catttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccccctatgct 11276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 10900473 - 10900299
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  10900473 cttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 10900374  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10900373 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 10900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 18257139 - 18257313
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  18257139 cttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 18257238  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18257239 catttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 18257313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 20741102 - 20741276
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||| |||||||||| ||||||||||||||    
T  20741102 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttgttg 20741201  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20741202 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 20741276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 15828184 - 15828010
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| | ||||||||||| | |||||||||||||||||||||||||||||||||    
T  15828184 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttgttg 15828085  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15828084 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 15828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 261 - 433
Target Start/End: Complemental strand, 1149975 - 1149802
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||||||||||| |  |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  1149975 cttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgttg 1149876  T
Q  361 catttttcgtcctaccccccattttattctcca-aaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1149875 catttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccccctatg 1149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 261 - 433
Target Start/End: Complemental strand, 12935700 - 12935528
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| || ||||| | ||||||||||||||||||||||||||||||||     
T  12935700 cttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttgtta 12935601  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  12935600 catttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccccctatg 12935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 18505462 - 18505288
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  18505462 cttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgttg 18505363  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | ||| ||||||||||    
T  18505362 catttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 31470859 - 31470685
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||| ||||||| |  |||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  31470859 cttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 31470760  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  31470759 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccccttatgct 31470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 11444989 - 11445163
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||||||| ||||||| | || |||| |||||||||||||||||||||||||    
T  11444989 cttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttgttg 11445088  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  11445089 catttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccccctatgct 11445163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 28472639 - 28472812
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||   |||||||||| |||||||||| |||||||| | ||||||| |||| ||||||||||||||||||||    
T  28472639 cttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttg 28472738  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28472739 catttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 28472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 29859828 - 29860001
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||   |||||||||| |||||||||| |||||||| | ||||||| |||| ||||||||||||||||||||    
T  29859828 cttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttg 29859927  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29859928 catttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 2319674 - 2319832
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  2319674 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 2319773  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  2319774 catttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 262 - 435
Target Start/End: Complemental strand, 2322760 - 2322588
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| ||| |||| |||||||| | ||||||||||||||||||||||||||||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  2322660 atttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttccccctatgct 2322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 262 - 428
Target Start/End: Original strand, 10899942 - 10900109
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 10900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 12935159 - 12935318
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  12935159 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 12935258  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  12935259 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 261 - 422
Target Start/End: Original strand, 4811374 - 4811535
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||  || ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||     
T  4811374 cttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgttt 4811473  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacc 422  Q
    ||||||||||| |||||||||||||||||| |||||||||||| |||| |||||||||||||    
T  4811474 catttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 23074001 - 23074164
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||               
T  23074001 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat----------- 23074089  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||    
T  23074090 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccttctatgct 23074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 250 - 419
Target Start/End: Complemental strand, 11445541 - 11445371
Alignment:
Q  250 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 349  Q
    ||||||| || |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  11445541 taaaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattat 11445442  T
Q  350 catttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||||||||||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  11445441 catttttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 22219896 - 22219737
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22219896 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 22219797  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||| ||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  22219796 catttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 23075671 - 23075512
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  23075671 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 23075572  T
Q  361 catttttcgtcctacccccca-ttttattctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||| ||||| || | |||||  ||||||||| |||||||||||||||||||||    
T  23075571 catttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 261 - 428
Target Start/End: Original strand, 11276592 - 11276760
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||| ||| |||| ||||||||||| |||||| ||||||| |||| ||||||||||| | ||||||| |||||||||||| |||||||||||     
T  11276592 cttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttgttt 11276691  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    |||||||||||||||| || ||||| |  ||||||||||||||||||||||||||||||| ||||||||    
T  11276692 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctacccc 11276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 261 - 412
Target Start/End: Original strand, 15827640 - 15827794
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaa--acggtccttcaattatcatttttgt 358  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||| ||||||||||||    
T  15827640 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttgt 15827739  T
Q  359 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgaca 412  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||| ||||||||    
T  15827740 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca 15827794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 18504922 - 18505080
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||| || ||||| |  ||| | ||| | |||||||||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttag 18505080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 250 - 419
Target Start/End: Original strand, 31470306 - 31470476
Alignment:
Q  250 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 349  Q
    |||| ||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||| ||| ||||||||| | |||||||| ||| |||||||||    
T  31470306 taaacttaaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattat 31470405  T
Q  350 catttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
     |||||||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  31470406 tatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 20741647 - 20741485
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcat---ttttg 357  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||   ||||     
T  20741647 cttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttt 20741548  T
Q  358 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||| ||||||    
T  20741547 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 257 - 401
Target Start/End: Original strand, 29033432 - 29033577
Alignment:
Q  257 aagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 356  Q
    |||||||||||||||||||||||||||| ||||||  | ||||||||| ||||||||||||||||||| | |||||||| |||||||| |||||||||||    
T  29033432 aagacttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcattttt 29033531  T
Q  357 gttgcatttttcgtcctaccccccattttatt-ctccaaaaacgca 401  Q
    ||||||  |||| |||||||||||||||| || |||||||||||||    
T  29033532 gttgcacatttcatcctaccccccatttttttcctccaaaaacgca 29033577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 261 - 376
Target Start/End: Complemental strand, 18257680 - 18257565
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| |||||||||||||||||||||   ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||     
T  18257680 cttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtta 18257581  T
Q  361 catttttcgtcctacc 376  Q
    ||||||||||||||||    
T  18257580 catttttcgtcctacc 18257565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 259 - 401
Target Start/End: Complemental strand, 29035182 - 29035040
Alignment:
Q  259 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 358  Q
    ||||||||||||||||| ||||||||||||| |  ||||||||||| ||||  ||||||||||||| | |||||||  |||||| | |||||||||||||    
T  29035182 gacttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgt 29035083  T
Q  359 tgcatttttcgtcctaccccccattttattctccaaaaacgca 401  Q
    |||||||||||||| |||| ||||||| | |||||||||||||    
T  29035082 tgcatttttcgtcccaccctccattttttcctccaaaaacgca 29035040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 262 - 395
Target Start/End: Complemental strand, 3835268 - 3835135
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    |||||||||||||||||||  ||||||||   ||||||||||| ||||||||||  ||||||| | |||||||  |||||| ||||||||||||||| ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  362 atttttcgtcctaccccccattttattctccaaa 395  Q
    |||||||||||||||||||||||||| |||||||    
T  3835168 atttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 261 - 400
Target Start/End: Original strand, 18296147 - 18296285
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| | |||| ||||||||||||||  |||||||| ||| || |  ||||||||||||| | |||||||| |||||||| |||||||||||||||    
T  18296147 cttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttttgttg 18296246  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  18296247 catttttcgtccta-cccccattttatcctccaaaaacgc 18296285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 261 - 385
Target Start/End: Complemental strand, 4811799 - 4811675
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| ||||||| ||||||||||||||  |||||| ||||||| || |||  |||||||| | |||||||||||||||||||||||||||||||||    
T  4811799 cttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgttg 4811700  T
Q  361 catttttcgtcctaccccccatttt 385  Q
    |||||||| || |||| || |||||    
T  4811699 catttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 261 - 347
Target Start/End: Original strand, 1149467 - 1149553
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaatt 347  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  1149467 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 35163639 - 35163557
Alignment:
Q  352 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgc 434  Q
    ||||| ||||| |||| |||||||| || |||||   |||||||||| |||||||||||||||||||| ||||||||||||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 22534268 - 22534214
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcc 315  Q
    |||||||||||||||||||||||| |||||    |||||||||| ||||||||||    
T  22534268 cttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 32836407 - 32836367
Alignment:
Q  395 aaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||| |||||||| ||||||||||||||||||| ||||||    
T  32836407 aaacgaagagaaataacagttttagacctaccccttatgct 32836367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 4e-82; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 37726931 - 37727105
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||| | || ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37726931 cttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 37727030  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37727031 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37727105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 39556120 - 39555946
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||| ||||    
T  39556120 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgttg 39556021  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39556020 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 39555946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 261 - 433
Target Start/End: Original strand, 20840562 - 20840734
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  20840562 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttgttg 20840661  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  20840662 catttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccccctatg 20840734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 31779195 - 31779021
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  31779195 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 31779096  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  31779095 catttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgct 31779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 262 - 435
Target Start/End: Original strand, 5136983 - 5137156
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||   |||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 5137082  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5137083 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 262 - 435
Target Start/End: Original strand, 41046703 - 41046876
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  || | |||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 41046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 24301099 - 24300925
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||| | |||||||||||||||| | ||||||||||||||    
T  24301099 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttgttg 24301000  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24300999 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 24300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 258 - 435
Target Start/End: Complemental strand, 25853773 - 25853596
Alignment:
Q  258 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 357  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||||||||| || | |||||||| | ||||||| ||||||||||||||||||||||    
T  25853773 agacttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttg 25853674  T
Q  358 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25853673 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 25853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 23644464 - 23644638
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||| ||||||  ||||||||||| |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||    
T  23644464 cttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttgttg 23644563  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  23644564 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 23644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 26837898 - 26837725
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||| ||||||||| |||||| |||||||||||| ||||| ||||||||||||||    
T  26837898 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttgttg 26837800  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  26837799 cattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccccctatgct 26837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 30104484 - 30104657
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||| | || | ||||||||||||||||||||||||||||    
T  30104484 cttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttgttg 30104583  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  30104584 catttttcgtccta-cccccattttattatctaaaaacgcagagaaatgacagttttagacctaccccctatgct 30104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 261 - 433
Target Start/End: Complemental strand, 32535506 - 32535330
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatc-----atttt 355  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||     |||||    
T  32535506 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatttt 32535407  T
Q  356 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  32535406 tgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatg 32535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 265 - 414
Target Start/End: Original strand, 48452995 - 48453144
Alignment:
Q  265 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatt 364  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||    
T  48452995 attacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 48453094  T
Q  365 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48453095 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 256 - 435
Target Start/End: Complemental strand, 27394125 - 27393946
Alignment:
Q  256 taagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttt 355  Q
    |||| |||||||||||||||||||||||||||||||  |||||||||||  ||||||||| |||||||| | ||||||||| ||||||||||||||||||    
T  27394125 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttt 27394026  T
Q  356 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  27394025 tgttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccccatatgct 27393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 261 - 428
Target Start/End: Original strand, 43973443 - 43973610
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||||||||||||   ||||||||||| || |  ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  43973443 cttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 43973542  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  43973543 catttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctacccc 43973610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 256 - 435
Target Start/End: Complemental strand, 17465040 - 17464860
Alignment:
Q  256 taagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttt 355  Q
    |||| |||||||||| ||||||||||||||||||||  ||| || ||||||||||   ||||||||||||| ||||||||||||||||||||||||||||    
T  17465040 taaggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttt 17464941  T
Q  356 tgttgcat-ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  17464940 tgttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 263 - 435
Target Start/End: Complemental strand, 22425354 - 22425182
Alignment:
Q  263 taattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgca 362  Q
    |||||||||||||||||||||||||| ||  |||||||||| |||||| ||||||| ||||| | ||||||||||| |||||||||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  363 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccccctatgct 22425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 262 - 435
Target Start/End: Complemental strand, 26275108 - 26274936
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||| | |||||| ||| ||||||||   ||||||||||||||||||| ||||||||||| | || |||||||||| ||||||||||||||||||||    
T  26275108 ttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc 26275009  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26275008 -tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccccctatgct 26274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 31778655 - 31778814
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| | ||||||||||||||||  |||||||||||||||    
T  31778655 cttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttgttg 31778754  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  31778755 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 37727473 - 37727314
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  37727473 cttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 37727374  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  37727373 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 43973983 - 43973824
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  43973983 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 43973884  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| || | ||| |||||||||||||||||||||||||    
T  43973883 catttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 27393657 - 27393822
Alignment:
Q  255 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 354  Q
    ||||| ||||||||||||||||||||||||||||||   ||||||| |||||||||||||| |||||||| | |||||||||||||||||||||||||||    
T  27393657 ttaaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcattt 27393756  T
Q  355 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||||||||||||| ||||| |  | ||| |||||||||||||||||||||||||    
T  27393757 ttgttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 20841104 - 20840945
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  20841104 cttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttg 20841005  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  20841004 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 25853236 - 25853395
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25853236 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttg 25853335  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||| ||||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  25853336 catttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 39555580 - 39555739
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| | ||||||| |||||||||||||||||||||||||    
T  39555580 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttgttg 39555679  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||| ||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  39555680 catttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 262 - 400
Target Start/End: Complemental strand, 25612519 - 25612381
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    |||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||| |||||||| ||| || ||||||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  25612419 atttttcgtcctaccccccattttatcctccaaaaacgc 25612381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 4275907 - 4275748
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||| | ||||||||||||||| |||||||||||||||||    
T  4275907 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttgttg 4275808  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  4275807 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 5137524 - 5137365
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  5137524 cttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 5137425  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||| |||||| | || ||||| |  ||||| |||||||||||||||||||||||||    
T  5137424 catttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 249 - 419
Target Start/End: Complemental strand, 30098318 - 30098147
Alignment:
Q  249 gtaaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaatta 348  Q
    |||||| |||| ||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||| | ||||||| |||||||||||||    
T  30098318 gtaaaaataaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaatta 30098219  T
Q  349 tcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||||||||||||||| || ||||| |  || || ||||||||||| |||||||||||||    
T  30098218 tcatttttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 261 - 421
Target Start/End: Complemental strand, 29801959 - 29801798
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  29801959 cttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttg 29801860  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 421  Q
    |||||||||||| ||| || ||||| |  ||||| |||||||||||||||||| ||||||||    
T  29801859 catttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 17464493 - 17464652
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  || || ||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  17464493 cttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17464592  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| ||||| | |||||||||||||||||    
T  17464593 catttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 26837363 - 26837521
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||| |||||||||| || ||||||  ||||||||||| |||||||||||||||| || ||||| ||||||||||||||||||||||||||||||    
T  26837363 ttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgttgc 26837462  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  26837463 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 32534962 - 32535120
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||| | ||||||||||||||||||||||||||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||| || ||||| |  ||| | || | ||||||||||||||||||||    
T  32535062 atttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttag 32535120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 261 - 401
Target Start/End: Complemental strand, 50116952 - 50116812
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| |||||||||||||  |||||||||||| ||||| ||||||||| ||| | |||||||||||| |||| |||||||||||||||    
T  50116952 cttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgttg 50116853  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgca 401  Q
    || |||||||||||||||||||||| | |||||||||||||    
T  50116852 caattttcgtcctaccccccattttttcctccaaaaacgca 50116812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 22424816 - 22424975
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||| |||||||||  |  |||| ||||||||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||    
T  22424816 cttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 22424915  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  22424916 catttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 23645008 - 23644849
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| ||||||||||||||||||||||  ||||||||||| ||||||| ||||||||||| | |||||||||||| ||||||||||||||||||||    
T  23645008 cttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 23644909  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||| ||||||| || ||||| |  ||| |  ||||||||||||||||||||||||    
T  23644908 catttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 261 - 380
Target Start/End: Original strand, 29801358 - 29801477
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  29801358 cttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 29801457  T
Q  361 catttttcgtcctacccccc 380  Q
    ||||||||||| ||||||||    
T  29801458 catttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 26274570 - 26274728
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||| ||||| |||| || ||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||| |||| || ||||| |  ||||| ||||||||  |||||||||||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 24300560 - 24300717
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||| |||||||| ||||||||||| ||| ||||||||||||||||| |||||||||| | || |||||||| ||||||||||||||||||||||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    | ||||||||| ||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  24300659 aattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 261 - 400
Target Start/End: Complemental strand, 51474877 - 51474737
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||| | ||||||||||  ||||||||||| ||||| ||||||||||||| |||||||||  |||||| | |||||||||||||||    
T  51474877 cttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttgttg 51474778  T
Q  361 catttttcgtcctacccccca-ttttattctccaaaaacgc 400  Q
    ||||||||||||||||||| | |||||| ||||||||||||    
T  51474777 catttttcgtcctacccccaatttttatcctccaaaaacgc 51474737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 261 - 398
Target Start/End: Complemental strand, 23228550 - 23228414
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||| ||||||||||  ||||||||||| || || |||||||||||||   |||||||  |||||||||||||||||||| |||    
T  23228550 cttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaacg-aacaaaattgtccttcaattatcatttttattg 23228452  T
Q  361 catttttcgtcctaccccccattttattctccaaaaac 398  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  23228451 catttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 261 - 397
Target Start/End: Original strand, 45965940 - 45966076
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||  |  |||||| ||||||||| |||||||||  ||||||| |||||||||| |||||    
T  45965940 cttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtgttg 45966039  T
Q  361 catttttcgtcctaccccccattttattctccaaaaa 397  Q
    |||||||||| ||| |||||||||| | |||||||||    
T  45966040 catttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 261 - 399
Target Start/End: Complemental strand, 32697243 - 32697106
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| | |||||||||||||||||| |  ||||||||||| | |||  |||||||||||| | |||||||  || |||||||||||||||||||||    
T  32697243 cttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgttg 32697144  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacg 399  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  32697143 catttttcgtcctac-ccccattttatcctccaaaaacg 32697106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 262 - 419
Target Start/End: Complemental strand, 41047239 - 41047083
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||| | || || ||||||||  |||||||||||||||| ||| |||||||||| | || |||||| ||||||||||||||||||||||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgc 41047142  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  41047141 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 258 - 403
Target Start/End: Complemental strand, 25420687 - 25420542
Alignment:
Q  258 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 357  Q
    ||||||||||||||||||| || |||| |||||   ||||||||||| || ||  |||||||||||||| || ||||  ||||||||||||| |||||||    
T  25420687 agacttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttg 25420588  T
Q  358 ttgcatttttcgtcctaccccccattttattctccaaaaacgcaga 403  Q
    |||||||||||||| ||||||||||||||| || |||||| |||||    
T  25420587 ttgcatttttcgtcataccccccattttatccttcaaaaatgcaga 25420542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 261 - 373
Target Start/End: Original strand, 51473430 - 51473542
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||| | |||||||  |||||||  |||||||||||||||    
T  51473430 cttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgttg 51473529  T
Q  361 catttttcgtcct 373  Q
    || |||| |||||    
T  51473530 cacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 261 - 400
Target Start/End: Original strand, 37220559 - 37220698
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||| ||||||  ||||||| | |  | || ||| ||||||||| | || ||||  |||||||| |||||||||||||||    
T  37220559 cttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttgttg 37220658  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    || |||||||||||||| ||||||||| ||||||||||||    
T  37220659 cacttttcgtcctaccctccattttatcctccaaaaacgc 37220698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 278 - 387
Target Start/End: Complemental strand, 18010271 - 18010162
Alignment:
Q  278 tcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccc 377  Q
    ||||| |||||| || ||||||||||| |||| | |||||||||||| | |||||||  ||  ||||||||||||||||||||||||||||||||| |||    
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccc 18010172  T
Q  378 cccattttat 387  Q
     |||||||||    
T  18010171 tccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 265 - 400
Target Start/End: Original strand, 25419150 - 25419285
Alignment:
Q  265 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtcc-ttcaattatca-tttttgttgca 362  Q
    |||| |||||||||| ||||||||| | |||||||||||| | || |||||||||||||| | |||||||| |||| ||||||||||| ||||| |||||    
T  25419150 attatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcatttttttttgca 25419249  T
Q  363 tttttcgtcctaccccccattttattctccaaaaacgc 400  Q
     |||| |||||  |||||||||||  ||||||||||||    
T  25419250 gttttagtccttacccccatttta--ctccaaaaacgc 25419285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 401
Target Start/End: Original strand, 23227334 - 23227398
Alignment:
Q  337 gtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgca 401  Q
    ||||| ||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||||||    
T  23227334 gtcctccaattttcatttttgttgcatttttcgtccttctccccattttatcctccaaaaacgca 23227398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 345
Target Start/End: Complemental strand, 37222114 - 37222030
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaa 345  Q
    ||||||||||||||||||||||||||||||   ||||||| ||| |||||||||| |||||||| | ||||||||  ||||||||    
T  37222114 cttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 389 - 436
Target Start/End: Original strand, 49407925 - 49407972
Alignment:
Q  389 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgcta 436  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  49407925 ctccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 364 - 435
Target Start/End: Original strand, 55192222 - 55192293
Alignment:
Q  364 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||| |||||||| || |||||   ||||| |||||||||||||||||||||||||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 375 - 435
Target Start/End: Original strand, 29801532 - 29801592
Alignment:
Q  375 ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| |||| | ||||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttagacatacctcatatgct 29801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 435
Target Start/End: Original strand, 37075781 - 37075864
Alignment:
Q  352 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||| ||||| |||| |||||||| |  |||||   ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  37075781 ttttttttgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 27200235 - 27200062
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||| |  |||||     ||||||||| |||| |||||  ||| ||||  ||||| || |||||  || |||||| ||| |||    
T  27200235 cttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgttttttg 27200137  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    || |||| ||| |||| || |||||   ||||| ||||||||||||||||||| |||||||||||||| ||||||    
T  27200136 cagttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctaccccttatgct 27200062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 435
Target Start/End: Complemental strand, 36701643 - 36701466
Alignment:
Q  258 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 357  Q
    ||||||||||||||||||||||||||  |||||     ||||||||| ||||| || |  ||| ||||  |||||||   ||| | || |||||| |||     
T  36701643 agacttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgtttt 36701544  T
Q  358 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||| |||| ||| |||| || |||||   ||||| |||| || ||||||| |||||||||||||||||| ||||||    
T  36701543 ttgcagttttagtcatacctcctattttcaactccagaaacacatagaaatggcagttttagacctaccccatatgct 36701466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 435
Target Start/End: Complemental strand, 50901082 - 50900898
Alignment:
Q  250 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 349  Q
    ||||||| || |||||||||||||||||||||||  |||||     ||||| ||| ||| ||||||  ||  ||||  |||||||| |||| | || |||    
T  50901082 taaaatttaggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat 50900983  T
Q  350 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
     || ||| ||||| |||| |||||||| || |||||   ||||| ||||||| ||||||  |||||||||| ||||||||||||||    
T  50900982 -atgttttttgcagtttttgtcctacctcctattttcaactccataaacgcaaagaaattgcagttttagatctaccccctatgct 50900898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 429
Target Start/End: Complemental strand, 33412417 - 33412383
Alignment:
Q  395 aaacgcagagaaatgacagttttagacctaccccc 429  Q
    |||||||||||||||| ||||||||||||||||||    
T  33412417 aaacgcagagaaatgatagttttagacctaccccc 33412383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 435
Target Start/End: Original strand, 27199838 - 27199878
Alignment:
Q  395 aaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||| ||||  |||||||||||||||||||||||||    
T  27199838 aaacgcagataaatatcagttttagacctaccccctatgct 27199878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 386
Target Start/End: Original strand, 32695706 - 32695830
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||| ||||||||||| | ||||||  |||| |||||| || |  || | |||||||| | |||||||  ||||| | ||||| |||||||||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  362 atttttcgtcctaccccccatttta 386  Q
    | |||| |||||  ||| |||||||    
T  32695806 aattttagtccttaccctcatttta 32695830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 4e-82; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 18984121 - 18984295
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  18984121 cttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 18984220  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  18984221 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 50970821 - 50970647
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  50970821 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 50970722  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970721 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 50970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 262 - 435
Target Start/End: Original strand, 15173099 - 15173272
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15173199 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 251 - 435
Target Start/End: Original strand, 29869612 - 29869796
Alignment:
Q  251 aaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatc 350  Q
    |||| |||| |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||     
T  29869612 aaaaataaggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatt 29869711  T
Q  351 atttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29869712 atttttgttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29869796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 262 - 435
Target Start/End: Complemental strand, 5963120 - 5962947
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| || ||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5963020 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 259 - 435
Target Start/End: Complemental strand, 33144464 - 33144288
Alignment:
Q  259 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 358  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||| || ||||||| ||||||||||||    
T  33144464 gacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgt 33144365  T
Q  359 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33144364 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33144288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 261 - 428
Target Start/End: Complemental strand, 5540361 - 5540194
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||| | || ||||||||||||||||||||||||||||||    
T  5540361 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttgttg 5540262  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5540261 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 5540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 253 - 428
Target Start/End: Complemental strand, 15646746 - 15646571
Alignment:
Q  253 aattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcat 352  Q
    ||||||| |||||||||||||||||||||||||||||||  |||||||||||||| |||| ||||||||||| | |||||||||||||||||||||||||    
T  15646746 aattaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcat 15646647  T
Q  353 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15646646 ttttgttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 261 - 428
Target Start/End: Original strand, 29306955 - 29307122
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||| || |||||||||| | |||||||||||||||||||||||||||||||||    
T  29306955 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 29307054  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307055 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 29307122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 21856586 - 21856412
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||| ||||||| |||||||| | |||||||||||||||||| ||||||||||| ||    
T  21856586 cttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgctg 21856487  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856486 catttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 21856412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 8679084 - 8678911
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||||    
T  8679084 cttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgttg 8678985  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8678984 catttttcgtccta-cctccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 9018975 - 9019149
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||||||||| | |||||||||||| ||||| ||||||||||||||    
T  9018975 cttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttgttg 9019074  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||    
T  9019075 catttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccccctatgct 9019149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 17433218 - 17433392
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||| ||||||||  |||||| |||||||  | ||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  17433218 cttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttg 17433317  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17433318 catttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 258 - 435
Target Start/End: Original strand, 39154018 - 39154195
Alignment:
Q  258 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 357  Q
    |||||||||||||||||||||| || ||||||||  |||||||||||||| || ||||||||||||| | |||||||||||||| |||||||||||||||    
T  39154018 agacttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttg 39154117  T
Q  358 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  39154118 ttgcatttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacccatcccctatgct 39154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 261 - 433
Target Start/End: Complemental strand, 26859602 - 26859431
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||  |||||||||||||||| | ||||| |||||||||||||||||||||||||||    
T  26859602 cttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttgttg 26859503  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||    
T  26859502 catttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacctcctatg 26859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 261 - 428
Target Start/End: Complemental strand, 29307485 - 29307317
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||| ||||||||||||||||||||||   ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  29307485 cttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 29307386  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||||||||||||    
T  29307385 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 29307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 258 - 419
Target Start/End: Original strand, 21856041 - 21856203
Alignment:
Q  258 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 357  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  21856041 agacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 21856140  T
Q  358 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||| ||||| | || ||||| |  ||||| |||||||||||||||||||||||||    
T  21856141 ttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 258 - 421
Target Start/End: Complemental strand, 17433761 - 17433597
Alignment:
Q  258 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 357  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||    
T  17433761 agacttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 17433662  T
Q  358 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 421  Q
    ||||||||||||||||||| || ||||| |  || || |||||||||||||||||||||||||||    
T  17433661 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 8678543 - 8678702
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  8678543 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttg 8678642  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||||  | ||||| |  || || ||||||| |||||||||||||||||    
T  8678643 catttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttag 8678702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 39154563 - 39154404
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||    
T  39154563 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttg 39154464  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  || || |||||||||||||||||| ||||||    
T  39154463 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 261 - 417
Target Start/End: Original strand, 50970280 - 50970437
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||  | |||||||||||||||||||||||||||||||||    
T  50970280 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttgttg 50970379  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttt 417  Q
    ||||||||||||||||  | ||||| |  ||||| |||||||||||||||||||||||    
T  50970380 catttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 5539818 - 5539977
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  5539818 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 5539917  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
     ||||||||||||||| || ||||| |  ||||| ||||||| ||||||| |||||||||    
T  5539918 tatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 29870162 - 29870003
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  29870162 cttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttg 29870063  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||  | |||||||||||||||||||||||||    
T  29870062 catttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 261 - 418
Target Start/End: Complemental strand, 4636514 - 4636356
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  4636514 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttg 4636415  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 418  Q
    |||||||||||| ||| || ||||| |  ||||| |||||||||||||||||| |||||    
T  4636414 catttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 255 - 419
Target Start/End: Complemental strand, 18984668 - 18984503
Alignment:
Q  255 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 354  Q
    ||||| ||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  18984668 ttaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 18984569  T
Q  355 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||||||||| || ||||| |  ||| | |||| |||||||||| |||||||||    
T  18984568 ttgttgcatttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttag 18984503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 267 - 419
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  267 tacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttt 366  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  367 tcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 15173636 - 15173478
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||||||| |||||||| | ||||||| |||||||||||||||||||||||||    
T  15173636 cttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15173538  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  15173537 catttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 261 - 428
Target Start/End: Complemental strand, 9019506 - 9019338
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||||||||||||   ||||||| |||||||| ||||| |||||||| | |||||||||||| ||||||||||||||||||||    
T  9019506 cttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttg 9019407  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    |||||||||||||||| || ||||| |  | ||| |||||||||||||| |||||||||||||| ||||    
T  9019406 catttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacctgcccc 9019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 15646194 - 15646353
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | ||||||| ||| |||||||||||||||||||||    
T  15646194 cttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttgttg 15646293  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| |  ||||| |  ||||| ||| |||||||||||||||||||||    
T  15646294 catttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 254 - 399
Target Start/End: Original strand, 52268285 - 52268430
Alignment:
Q  254 attaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatt 353  Q
    |||||| |||||||||||||||||||||||| ||||||  | ||||||||| ||||||||||||||||||| | |||||||| ||| |||| ||||||||    
T  52268285 attaaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatt 52268384  T
Q  354 tttgttgcatttttcgtcctaccccccattttattctccaaaaacg 399  Q
    ||||||||| |||||||||||||||||||||| | |||||||||||    
T  52268385 tttgttgcacttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 261 - 376
Target Start/End: Original strand, 26859061 - 26859176
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||| |||||||||  |||| ||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  26859061 cttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttg 26859160  T
Q  361 catttttcgtcctacc 376  Q
    ||||||||||||||||    
T  26859161 catttttcgtcctacc 26859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 332 - 433
Target Start/End: Original strand, 4636045 - 4636146
Alignment:
Q  332 aaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccccta 431  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4636045 aaacggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacccccta 4636144  T
Q  432 tg 433  Q
    ||    
T  4636145 tg 4636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 5962580 - 5962739
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| |||||||||||||||| |||| || ||||||||||||||| |||||||||||| | |||||||||||| ||||| ||||||||||||||    
T  5962580 cttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgttg 5962679  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||| ||||| || ||||| |  ||||| |||| ||||| ||||||||||||||    
T  5962680 catttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 258 - 375
Target Start/End: Complemental strand, 52269294 - 52269177
Alignment:
Q  258 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 357  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||  ||| |||||||||||||| | |||||||  ||| |||| ||||||||||||    
T  52269294 agacttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttg 52269195  T
Q  358 ttgcatttttcgtcctac 375  Q
    ||||| ||||||||||||    
T  52269194 ttgcacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 17112284 - 17112442
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||| ||| ||||||| | |||||| |||| ||||   |||||||||||||| || ||||  |||||||||||||||||||| |||    
T  17112284 cttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttattg 17112382  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||| |||||| ||||||||    
T  17112383 catttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 47826956 - 47827039
Alignment:
Q  251 aaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaa 334  Q
    |||| ||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  47826956 aaaaataatacttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 345
Target Start/End: Complemental strand, 2733500 - 2733416
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaa 345  Q
    |||||||| |||||||||||| |||||||||  || || ||||| ||||||||||||||||||| | ||||||||||||||||||    
T  2733500 cttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 267 - 359
Target Start/End: Complemental strand, 47827125 - 47827033
Alignment:
Q  267 tacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgtt 359  Q
    |||||||||| ||  | ||||||||  ||||||||||| ||||| ||||||||||||| | |||||||  |||||| ||||||||||||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 429
Target Start/End: Complemental strand, 17088550 - 17088516
Alignment:
Q  395 aaacgcagagaaatgacagttttagacctaccccc 429  Q
    |||||||||||||||||||||||||||||||||||    
T  17088550 aaacgcagagaaatgacagttttagacctaccccc 17088516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 435
Target Start/End: Original strand, 39485068 - 39485240
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||  |||||  |  ||||||||| ||||||| ||  ||| ||||  |||||||  |||| | || ||| || ||| ||||    
T  39485068 ttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactat-atgttttttgc 39485166  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    | |||| |||||| | || |||||   || || |||| |||||| |||||||||||||||||||||| ||||||    
T  39485167 agttttagtcctatctcctattttcaacttcagaaacacagagagatgacagttttagacctaccccatatgct 39485240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 435
Target Start/End: Original strand, 17088243 - 17088326
Alignment:
Q  352 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||| ||||| |||| |||||||| || |||||   || || ||| ||||||||||| |||||||||||||||| ||||||||    
T  17088243 ttttttttgcaattttagtcctacctcctattttcaacttcagaaatgcagagaaatggcagttttagacctacctcctatgct 17088326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 386
Target Start/End: Original strand, 39843193 - 39843280
Alignment:
Q  299 acgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttta 386  Q
    ||||||||||||||||| |||| ||||  ||||||||||||| |  | |||||| ||| ||||| |||| |||||  |||||||||||    
T  39843193 acgaaactggtcctgcctttttcaaatcgaacaaaacggtccctatactatcatgttttttgcacttttggtccttacccccatttta 39843280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 435
Target Start/End: Complemental strand, 9833599 - 9833522
Alignment:
Q  358 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||| |||| ||||||||||| |||||   ||||| ||||||| |||||| ||| |||||| |||||| ||||||||    
T  9833599 ttgcagttttagtcctaccccctattttcaactccagaaacgcacagaaataacatttttagtcctaccacctatgct 9833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 29020959 - 29021056
Alignment:
Q  338 tccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||| ||||||||| ||| ||||| |||| ||  ||| ||| |||||   ||||||||||||| | ||||| ||||||||| ||||||| |||||||    
T  29020959 tccttaaattatcatgttttttgcaattttagtgttactccctattttcacctccaaaaacgcacataaatgtcagttttagtcctacccgctatgct 29021056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 50419770 - 50419725
Alignment:
Q  295 actcacgaaactggtcctgcccttttaaaatataacaaaacggtcc 340  Q
    |||||||||| |||||||||| |||||||||  |||||||||||||    
T  50419770 actcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 399
Target Start/End: Complemental strand, 52235178 - 52235074
Alignment:
Q  295 actcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaa 394  Q
    ||||||||||||| |||||||||||| ||||  ||| || | |||| |  | |||||| ||| ||||| |||| |||||| ||| |||||||  ||||||    
T  52235178 actcacgaaactgatcctgcccttttcaaatcgaacgaagcagtccctatactatcatgtttcttgcaattttggtcctaaccctcattttaccctccaa 52235079  T
Q  395 aaacg 399  Q
    |||||    
T  52235078 aaacg 52235074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 6e-81; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 255 - 435
Target Start/End: Original strand, 33109680 - 33109860
Alignment:
Q  255 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 354  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||    
T  33109680 ttaagacttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcattt 33109779  T
Q  355 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33109780 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 257 - 435
Target Start/End: Complemental strand, 46193952 - 46193774
Alignment:
Q  257 aagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 356  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  46193952 aagacttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 46193853  T
Q  357 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  46193852 attgcatttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccccctatgct 46193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 250 - 435
Target Start/End: Original strand, 4219548 - 4219733
Alignment:
Q  250 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 349  Q
    |||||| | |||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||| |||||||||||||    
T  4219548 taaaatgatgacttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattat 4219647  T
Q  350 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  4219648 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 256 - 435
Target Start/End: Complemental strand, 15523782 - 15523603
Alignment:
Q  256 taagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttt 355  Q
    |||| ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| | ||||||| |||||||||| |||||||||    
T  15523782 taaggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttt 15523683  T
Q  356 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15523682 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 15523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 12234331 - 12234505
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  12234331 cttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 12234430  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  12234431 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccccctatgct 12234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 258 - 428
Target Start/End: Complemental strand, 38962365 - 38962195
Alignment:
Q  258 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 357  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||    
T  38962365 agacttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttg 38962266  T
Q  358 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38962265 ttgcatttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacccc 38962195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 11153690 - 11153516
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  11153690 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgttg 11153591  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  11153590 catttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccccctatgct 11153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 261 - 429
Target Start/End: Complemental strand, 25447779 - 25447611
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  25447779 cttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttg 25447680  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccc 429  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25447679 catttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccccc 25447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 257 - 435
Target Start/End: Original strand, 23494441 - 23494619
Alignment:
Q  257 aagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 356  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||||| ||||||||||||||||| | |||||| ||||||||||||||||||||||    
T  23494441 aagacttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcattttt 23494540  T
Q  357 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
     |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  23494541 attgcatttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacctcatatgct 23494619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 25937672 - 25937846
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| |||||||||||||||||| |  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  25937672 cttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 25937771  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25937772 cattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 25937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 51020799 - 51020973
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| ||||| |||||||| | | |||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  51020799 cttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttg 51020898  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  51020899 catttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 262 - 435
Target Start/End: Complemental strand, 22434718 - 22434547
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |||||||  | |||||||||||| |||||||||||||||||||||    
T  22434718 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaac-agaacaaaacggtcattcaattatcatttttgttgc 22434620  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22434619 atttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 22434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 22170479 - 22170306
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||||||||||||   |||| |||||| || ||||||| |||||||| | |||||||||||| ||||||||||||||||||||    
T  22170479 cttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttgttg 22170381  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22170380 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccccctatgct 22170306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 262 - 435
Target Start/End: Original strand, 45082435 - 45082606
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    |||||||| ||||||||| |||||||||||| |||||||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45082435 ttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 45082533  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  45082534 atttttcgtccta-cccccattttattctccaaaaacacagagaaatgacaattttagacctaccccctatgct 45082606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 48526198 - 48526371
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||| |||||||||||   |||||| ||||||||  |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  48526198 cttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 48526297  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  48526298 catttttcgtccta-cccccattttattctccaaaaatgcagagaaatgacagttttagatctaccccctatgct 48526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 262 - 435
Target Start/End: Complemental strand, 2118837 - 2118665
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    |||||||||||||||||| |||||||||||  | |||| ||||||||||||  |||||||||| |||||||||||||| |||||||||||||||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  2118737 atttttcgtcctac-ccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 2118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 262 - 435
Target Start/End: Complemental strand, 54995609 - 54995437
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  54995609 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-ttttgttgc 54995511  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||| |||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||||    
T  54995510 atttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 22434181 - 22434340
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22434181 cttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 22434280  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
     ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  22434281 tatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 45082967 - 45082808
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  45082967 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 45082868  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  45082867 catttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 261 - 421
Target Start/End: Original strand, 46193407 - 46193568
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  46193407 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgttg 46193506  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 421  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||||    
T  46193507 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 25447249 - 25447408
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  25447249 cttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 25447348  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||||| ||||||    
T  25447349 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 261 - 418
Target Start/End: Original strand, 15523237 - 15523395
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||| |||    
T  15523237 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttttttg 15523336  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 418  Q
    |||||||||||||||| || ||||| |  ||| | ||||||||||||||||||||||||    
T  15523337 catttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 262 - 419
Target Start/End: Complemental strand, 48526723 - 48526565
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 328 - 435
Target Start/End: Complemental strand, 12503912 - 12503805
Alignment:
Q  328 aacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 427  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12503912 aacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 12503813  T
Q  428 cctatgct 435  Q
    ||||||||    
T  12503812 cctatgct 12503805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 23494986 - 23494872
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  23494986 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 23494887  T
Q  361 catttttcgtcctac 375  Q
    |||||||||||||||    
T  23494886 catttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 2118291 - 2118454
Alignment:
Q  257 aagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 356  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  2118291 aagacttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcattttt 2118390  T
Q  357 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||||||| || ||||| |  || || ||||||||||||||  |||||||||    
T  2118391 gttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttag 2118454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 11153148 - 11153307
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| ||||||||||||||||||||||  ||||||| ||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||||||    
T  11153148 cttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgttg 11153247  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  | ||| |||||||||||||||||||||||||    
T  11153248 catttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 12234872 - 12234713
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| ||||||||||||||||||||||  |||||||||||||| || ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  12234872 cttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 12234773  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  | ||| ||| |||||||||||||||||||||    
T  12234772 catttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 20471054 - 20470895
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||| | ||||||||||| | |||||||||||| ||||||||||||||||||||    
T  20471054 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 20470955  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  20470954 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 262 - 419
Target Start/End: Complemental strand, 4220101 - 4219943
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||||||| | ||||||| |||| |||||||||||||||||||||    
T  4220101 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttgttgc 4220002  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||| || ||||| |  || ||||||||||||||||| ||||||||||    
T  4220001 atttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 54995072 - 54995230
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  54995072 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 54995171  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  54995172 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 261 - 385
Target Start/End: Complemental strand, 33110007 - 33109883
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||| ||||||||  | ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33110007 cttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 33109908  T
Q  361 catttttcgtcctaccccccatttt 385  Q
    |||||||||||||||| || |||||    
T  33109907 catttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 250 - 418
Target Start/End: Complemental strand, 25938225 - 25938056
Alignment:
Q  250 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 349  Q
    |||||| ||| ||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||| | |||||||| |||||||||||||    
T  25938225 taaaataaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattat 25938126  T
Q  350 catttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 418  Q
    |||||||||||||||||| |||||||| || ||||| |  ||||| |||| || ||||||| ||||||||    
T  25938125 catttttgttgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagtttta 25938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 51021338 - 51021180
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||| | ||||||||||||||| |||||||| ||||||||    
T  51021338 cttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-ttttgttg 51021240  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||| || ||||||    
T  51021239 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttag 51021180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 18751602 - 18751760
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  ||||||  ||||||||| ||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||| ||| || ||||| |  ||||| ||||||||| ||||| |||||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 261 - 400
Target Start/End: Original strand, 48293596 - 48293735
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||||||||||||| |||||||||||| || ||||| |  ||||||| | |||||||  || |||||||||||||||||||||    
T  48293596 cttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttgttg 48293695  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    |||||||| |||| ||| ||||||||||||||||||||||    
T  48293696 catttttcatcctgccctccattttattctccaaaaacgc 48293735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 261 - 401
Target Start/End: Complemental strand, 20958402 - 20958264
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||| |||||||| ||||||  ||||||||||| ||||||||||||||||||| | ||||||   ||||||||||||||||||||||||    
T  20958402 cttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgttg 20958303  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgca 401  Q
    ||||||| |||||| |||||||||||| |||||||||||||    
T  20958302 cattttt-gtccta-cccccattttatcctccaaaaacgca 20958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 258 - 373
Target Start/End: Complemental strand, 18764066 - 18763951
Alignment:
Q  258 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 357  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||| || |||||||||| | ||||||| |||| ||||| |||||||||||    
T  18764066 agacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttg 18763967  T
Q  358 ttgcatttttcgtcct 373  Q
    ||||||||||||||||    
T  18763966 ttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 262 - 395
Target Start/End: Original strand, 16690939 - 16691072
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||| |||||||||| |||||||| | ||||||||||| ||||||||||  ||||||| | |||||||   ||||||||||||||||||||||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  362 atttttcgtcctaccccccattttattctccaaa 395  Q
    |||||||||||||||||| ||||||| |||||||    
T  16691039 atttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 276 - 419
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  276 ggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 375  Q
    |||||||||||||||  ||||||||||||||| ||| ||| |||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  376 cccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    | || ||||| |  ||||| |||||||||||||| ||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 261 - 400
Target Start/End: Complemental strand, 44892691 - 44892552
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| | |||||||||||||||||||   ||||||||||| |||| ||||| |||||||| | |||||||| ||| |||||||||  |||||||||    
T  44892691 cttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgttg 44892592  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  44892591 catttttcgtcctaccctccattttatcctccaaaaacgc 44892552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 261 - 376
Target Start/End: Complemental strand, 35363144 - 35363028
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgccctttt-aaaatataacaaaacggtccttcaattatcatttttgtt 359  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||| |||| ||||| |||| | |||||||||||| |||||||||||||||||||    
T  35363144 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttgtt 35363045  T
Q  360 gcatttttcgtcctacc 376  Q
    ||||||||||| |||||    
T  35363044 gcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 261 - 400
Target Start/End: Complemental strand, 48295086 - 48294946
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| |||||||| |||||||||| | ||||||||||| ||||| ||||  ||||||| | |||||||  ||| ||||||||||||||||||||    
T  48295086 cttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgttg 48294987  T
Q  361 cattttt-cgtcctaccccccattttattctccaaaaacgc 400  Q
    ||||||| ||||||||||||||||||||  |||||||||||    
T  48294986 catttttccgtcctaccccccattttatcttccaaaaacgc 48294946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 266 - 397
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  266 ttacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcattt 365  Q
    ||||| |||||||||||| ||||||| |||||||||||| ||||| | | ||||||||| | |||||||  ||||||||||||||| |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  366 ttcgtcctaccccccattttattctccaaaaa 397  Q
    |||||| ||| ||||||||||||||| |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 277 - 400
Target Start/End: Complemental strand, 43243807 - 43243685
Alignment:
Q  277 gtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 376  Q
    |||||||||||||||  ||||||||||| ||||| ||||||||||||| | |||||||  || |||||||||||||||||||||||||||| |||||||     
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctac- 43243709  T
Q  377 ccccattttattctccaaaaacgc 400  Q
    ||||||||||| ||||||||||||    
T  43243708 ccccattttatcctccaaaaacgc 43243685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 262 - 401
Target Start/End: Complemental strand, 48713888 - 48713749
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||  | |||||||||| |  |||||| |||| ||||| ||| ||||||||| | |||||||  |||||||||||||||||||||||||    
T  48713888 ttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttgttgc 48713789  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgca 401  Q
    |||||||||||| ||| ||||||||| |||||||||||||    
T  48713788 atttttcgtcctcccctccattttatcctccaaaaacgca 48713749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 261 - 395
Target Start/End: Original strand, 48708297 - 48708431
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||  |||||||||  ||  ||||||| || |||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  48708297 cttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttgttg 48708396  T
Q  361 catttttcgtcctaccccccattttattctccaaa 395  Q
    ||||| |  ||||||| | |||||||| |||||||    
T  48708397 catttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 397
Target Start/End: Complemental strand, 43281317 - 43281198
Alignment:
Q  277 gtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 376  Q
    |||||||||||||||  ||||||||||| ||||| |||| |||||||| | |||||||  || |||||||||| ||||||||||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  377 ccccattttattctccaaaaa 397  Q
    ||||||||||| ||| |||||    
T  43281218 ccccattttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 261 - 400
Target Start/End: Original strand, 44890519 - 44890658
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| |||||||||| ||||||||   || |||||||| ||||| ||||||||||||| | |||||||   ||||| ||||||  |||||||||    
T  44890519 cttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgttg 44890618  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    |||||||| || ||||||||||||||| ||| ||||||||    
T  44890619 catttttcatcataccccccattttatcctcaaaaaacgc 44890658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 261 - 395
Target Start/End: Complemental strand, 16691614 - 16691481
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| |||  ||||||||   ||||||||||| ||||||||||  ||||||  |||||||||  |||||| |||||| ||||||||||    
T  16691614 cttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaac-ataacaaaattgtcctttaattattatttttgttg 16691516  T
Q  361 catttttcgtcctaccccccattttattctccaaa 395  Q
    ||||||||||| |||| |||||||||| |||||||    
T  16691515 catttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 256 - 385
Target Start/End: Complemental strand, 10258435 - 10258306
Alignment:
Q  256 taagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttt 355  Q
    |||| ||||||||||||||||||||||||||| |||  |||||| |||| ||||||||||||||||||| | |  ||||  ||  |||||||||||||||    
T  10258435 taaggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttt 10258336  T
Q  356 tgttgcatttttcgtcctaccccccatttt 385  Q
    ||||||| |||| ||| ||||||| |||||    
T  10258335 tgttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 368 - 435
Target Start/End: Complemental strand, 18752038 - 18751971
Alignment:
Q  368 cgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccccctatgct 18751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 252 - 435
Target Start/End: Original strand, 17503967 - 17504149
Alignment:
Q  252 aaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatca 351  Q
    |||||||| |||||||| ||| ||||||||||  |||||     ||||||||| ||||||||||  ||| ||||  |||| ||| |||||  || |||||    
T  17503967 aaattaaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatca 17504065  T
Q  352 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    | ||| ||||| |||| |||||||| || |||||   ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  17504066 tgttttttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 400
Target Start/End: Original strand, 43242328 - 43242411
Alignment:
Q  317 ttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    |||||||| | |||||||||||| |||||||||||||||| ||||||||||||||||||| || |||||||  |||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacgc 43242411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 324
Target Start/End: Complemental strand, 16318319 - 16318256
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaa 324  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||    
T  16318319 cttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaa 16318256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 17504369 - 17504329
Alignment:
Q  395 aaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 395 - 435
Target Start/End: Original strand, 35193443 - 35193483
Alignment:
Q  395 aaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35193443 aaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 400
Target Start/End: Complemental strand, 44220853 - 44220781
Alignment:
Q  328 aacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    |||||||  |||||||| |||||||||||||| |||||||||| |||||||  ||||||| ||||||||||||    
T  44220853 aacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaacgc 44220781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 367
Target Start/End: Original strand, 55189530 - 55189636
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| | ||||| |||||||||||||   || |||  ||| ||||  ||||||||||||||| |||||||  ||| ||||||||||||||||| |     
T  55189530 cttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgcta 55189629  T
Q  361 cattttt 367  Q
    |||||||    
T  55189630 cattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 402 - 435
Target Start/End: Original strand, 40160236 - 40160269
Alignment:
Q  402 gagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||    
T  40160236 gagaaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 341
Target Start/End: Complemental strand, 35193846 - 35193766
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtcct 341  Q
    ||||||||||||||||||||| |  ||||| |   ||||||||| ||||||||||  ||| |||| ||||||||| |||||    
T  35193846 cttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtcct 35193766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 2e-80; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 262 - 433
Target Start/End: Original strand, 11090524 - 11090695
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  11090524 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11090623  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11090624 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 11090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 247 - 435
Target Start/End: Original strand, 26538085 - 26538273
Alignment:
Q  247 ttgtaaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaat 346  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | |||||| ||||||||||||    
T  26538085 ttgtaaaattaaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaat 26538184  T
Q  347 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||||    
T  26538185 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagacctatcctctatgct 26538273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 262 - 432
Target Start/End: Original strand, 14432145 - 14432315
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 432  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 14432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 255 - 435
Target Start/End: Original strand, 40027136 - 40027316
Alignment:
Q  255 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 354  Q
    ||||| ||||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||    
T  40027136 ttaaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 40027235  T
Q  355 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40027236 ttgttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 40027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 239355 - 239528
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  239355 cttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttg 239453  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  239454 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 262 - 435
Target Start/End: Complemental strand, 40815887 - 40815714
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| | |||||||||| |||||||||||||||||||||||    
T  40815887 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttgttgc 40815788  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40815787 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 40815714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 18451374 - 18451200
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| | |||||||  ||||||||| ||||||||||||||    
T  18451374 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttgttg 18451275  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18451274 catttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 18451200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 22374322 - 22374496
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22374322 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 22374421  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| || |||||||    
T  22374422 catttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagacctaacctctatgct 22374496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 1978110 - 1978284
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| |||||||||| |||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  1978110 cttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 1978209  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1978210 cattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 1978284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 262 - 428
Target Start/End: Complemental strand, 8425902 - 8425736
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8425802 atttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 8425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 43058335 - 43058509
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| ||||||||||||||   |||||| |||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  43058335 cttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttg 43058434  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43058435 catttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 261 - 433
Target Start/End: Original strand, 28616615 - 28616788
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  28616615 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 28616714  T
Q  361 catttttcgtcctaccccccattttattctcc-aaaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    || ||||||||||||||||||||||||| ||| ||||||||||||||||  |||||||||||||||||||||||    
T  28616715 caattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccccctatg 28616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 265 - 435
Target Start/End: Original strand, 3025472 - 3025641
Alignment:
Q  265 attacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatt 364  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatt 3025571  T
Q  365 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  3025572 tttcgtccta-cccccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccccctatgct 3025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 261 - 428
Target Start/End: Complemental strand, 26538622 - 26538454
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||    
T  26538622 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttgttg 26538523  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    ||||||||||||||||||||||||| |  | ||| ||||||||||||||||||||||||||||||||||    
T  26538522 catttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctacccc 26538454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 261 - 433
Target Start/End: Original strand, 7446344 - 7446519
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| ||||||||||||||| |||||| |||| ||||||||||||||||||| | |||||||||||| |||||||||||||||| |||    
T  7446344 cttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttattg 7446443  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacag----ttttagacctaccccctatg 433  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||    |||||||| |||||||||||    
T  7446444 catttttcgtcata-cccccattttattctccaaaaacgcagagaaatgacagttaattttagacataccccctatg 7446519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 7446889 - 7446730
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| ||||| |||||||||||||  |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  7446889 cttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 7446790  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  7446789 catttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 40815347 - 40815506
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  361 catttttcgtcctacccccca-ttttattctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || | |||||  ||||| |||||||||||||||||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 261 - 400
Target Start/End: Original strand, 20444751 - 20444890
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||    
T  20444751 cttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgttg 20444850  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    || |||||||||||||||||||||||| ||||||||||||    
T  20444851 cagttttcgtcctaccccccattttatcctccaaaaacgc 20444890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 18450832 - 18450991
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||| |||    
T  18450832 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttttttg 18450931  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||| |||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  18450932 catttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 258 - 401
Target Start/End: Original strand, 15551498 - 15551641
Alignment:
Q  258 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| | |||||||  |||||||| ||||||||||||    
T  15551498 agacttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttg 15551597  T
Q  358 ttgcatttttcgtcctaccccccattttattctccaaaaacgca 401  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||    
T  15551598 ttgcatttttcgtccaaccctccattttatcctccaaaaacgca 15551641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 22374868 - 22374709
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22374868 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 22374769  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||| | ||| |||||||||||||||||||||    
T  22374768 catttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 262 - 419
Target Start/End: Complemental strand, 40027682 - 40027524
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||| || ||||| |  ||||| |||||||| |||||| |||||||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 261 - 376
Target Start/End: Complemental strand, 28847238 - 28847123
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  28847238 cttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttgttg 28847139  T
Q  361 catttttcgtcctacc 376  Q
    ||||||||||||||||    
T  28847138 catttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 261 - 400
Target Start/End: Original strand, 35779710 - 35779849
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||||||||||||   ||||||||||| |||||||||| |||||||| | |||||||  ||||||||||||||||||||||||    
T  35779710 cttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgttg 35779809  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  35779810 cattttttgtcctaccccccattttatcctccaaaaacgc 35779849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 261 - 400
Target Start/End: Complemental strand, 35781206 - 35781067
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| ||||||||||||||  ||||||||||| ||||| ||||||||||||| | ||||||||  |||||||||||||||||||||||    
T  35781206 cttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgttg 35781107  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  35781106 catttttcgtcctaacccccattttatcctccaaaaacgc 35781067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 251 - 419
Target Start/End: Complemental strand, 28617167 - 28616998
Alignment:
Q  251 aaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatc 350  Q
    ||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||| ||| |||||||||| | ||||||| |||||||||||||||    
T  28617167 aaaatgaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatc 28617068  T
Q  351 atttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||||||||| |||| || ||||| |  ||||| ||||||||||||||  |||||||||    
T  28617067 atttttgttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 239895 - 239736
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  239895 cttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 239796  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    | ||||||||| |||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  239795 cgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 11091063 - 11090904
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| ||||||    
T  11091063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattgttg 11090964  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
     ||||||||||||| | || ||||| |  ||||| ||||||||| |||||||| ||||||    
T  11090963 tatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 261 - 400
Target Start/End: Complemental strand, 20440574 - 20440436
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| | |||||||||||| |||| |||||||||||||||    
T  20440574 cttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttgttg 20440475  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    || ||||||||||| |||||| ||||| ||||||||||||    
T  20440474 cagttttcgtcctatccccca-tttatcctccaaaaacgc 20440436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 43058875 - 43058717
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||| | ||||||| |||||||||||||||| ||||||||    
T  43058875 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-ttttgttg 43058777  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  43058776 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 261 - 418
Target Start/End: Complemental strand, 3026004 - 3025848
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| |||||||||||||||||||| |||||||||||| |||| |||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  3026004 cttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgttg 3025907  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 418  Q
    |||||||||||||||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  3025906 catttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 259 - 400
Target Start/End: Original strand, 8972237 - 8972378
Alignment:
Q  259 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 358  Q
    |||||||||||||||||||||||||||||||||  | ||||||||| ||||| |||||||| |||| | |||||||  ||| ||||||||||||||||||    
T  8972237 gacttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgt 8972336  T
Q  359 tgcatttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    |||||||||||| |||||||| ||||||| ||||||||||||    
T  8972337 tgcatttttcgttctaccccctattttatcctccaaaaacgc 8972378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 261 - 385
Target Start/End: Complemental strand, 1978652 - 1978528
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  1978652 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttg 1978553  T
Q  361 catttttcgtcctaccccccatttt 385  Q
    ||||||| |||||||| || |||||    
T  1978552 cattttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 262 - 418
Target Start/End: Original strand, 8425358 - 8425514
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    |||||||||||||||||||| |||||||||  ||||||||||| ||||| | || |||||||| | ||||||||||| ||||||||||||||| ||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttgc 8425456  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 418  Q
    ||||||||||||||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 14432684 - 14432525
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||| ||||||||||||||||||||  |||||| |||||||||| |||| |||||||| | || |||| ||| |||||||||| ||||||||||    
T  14432684 cttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttg 14432585  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||| ||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  14432584 catttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 259 - 399
Target Start/End: Complemental strand, 15552598 - 15552459
Alignment:
Q  259 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 358  Q
    ||||||||||||||||||||| |  ||||||||  ||||||||||| || ||| |||||||||||| | |||||||  ||| ||||||||||||||||||    
T  15552598 gacttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgt 15552500  T
Q  359 tgcatttttcgtcctaccccccattttattctccaaaaacg 399  Q
    || |||||||||||||||| |||||||   |||||||||||    
T  15552499 tgtatttttcgtcctaccctccattttgccctccaaaaacg 15552459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 28143573 - 28143400
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||| |||||||||||||||  |||||     ||||||||| ||||||||||  ||| ||||  |||||||  |||| | || |||||| ||| |||    
T  28143573 cttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgttt-ttg 28143475  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    || |||| |||||||  || |||||   ||||| |||||||||||||||||||||||||||||||||||||||||    
T  28143474 cagttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 151; Significance: 1e-79; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 4795 - 4969
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  4795 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 4894  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4895 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 5336 - 5179
Alignment:
Q  259 gacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgt 358  Q
    |||||||||||||||||||||||||||||||||  || |||||||||||||| || |||||||||| | || ||||||||  ||||||||||||||||||    
T  5336 gacttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgt 5237  T
Q  359 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||    || ||||| |  ||||| ||||||||| |||||||||||||||    
T  5236 tgcatttttcgtcct----cctattttcaaactccagaaacgcagaaaaatgacagttttag 5179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 4750 - 4576
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||    
T  4750 cttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttg 4651  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4650 catttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 298 - 419
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  298 cacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaa 396  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  397 acgcagagaaatgacagttttag 419  Q
    | |||||||||||||||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 147; Significance: 2e-77; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 253 - 435
Target Start/End: Original strand, 64296 - 64478
Alignment:
Q  253 aattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcat 352  Q
    ||||||| ||||||||||||||||||||||||||||||   |||||||||||||| ||||| |||||||||| | |||||||||||||||||||||||||    
T  64296 aattaaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcat 64395  T
Q  353 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  64396 ttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 64478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 262 - 374
Target Start/End: Complemental strand, 64847 - 64735
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  362 atttttcgtccta 374  Q
    |||||||||||||    
T  64747 atttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 254 - 435
Target Start/End: Complemental strand, 205918 - 205738
Alignment:
Q  254 attaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatt 353  Q
    |||||| ||||||||||||||| ||||||   |||||    |||||||||| ||||||||||  ||| ||||  |||||||| |||| | || ||||||     
T  205918 attaagtcttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatg 205819  T
Q  354 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||| ||||| |||| |||||||  || |||||   ||||||||||||||||||||| |||||||||||||||||||||||||    
T  205818 ttt-ttgcagttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 19176833 - 19176659
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  19176833 cttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 19176734  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  19176733 catttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 250 - 435
Target Start/End: Complemental strand, 9930211 - 9930026
Alignment:
Q  250 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 349  Q
    |||||| ||| |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||    
T  9930211 taaaataaaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactat 9930112  T
Q  350 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  9930111 catttttgttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccccctatgct 9930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 252 - 435
Target Start/End: Original strand, 12571856 - 12572040
Alignment:
Q  252 aaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatca 351  Q
    ||||| || |||||||||||||||||||||||||||||||  |||||||||||||||| || ||||||||||| | |||||||||||| |||||||||||    
T  12571856 aaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatca 12571955  T
Q  352 tttttgttgcatttttcgtcct-accccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12571956 tttttgttgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 261 - 432
Target Start/End: Original strand, 41681136 - 41681306
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  41681136 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 41681235  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 432  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  41681236 catttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttaaacataccccctat 41681306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 44831788 - 44831614
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| | |||||||||||  ||||||||||||||||||||    
T  44831788 cttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttgttg 44831689  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44831688 catttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 44831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 262 - 435
Target Start/End: Original strand, 33328161 - 33328334
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| || ||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33328261 atttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 33328334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 263 - 435
Target Start/End: Original strand, 13224645 - 13224816
Alignment:
Q  263 taattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgca 362  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||| | ||||||||  ||||||||||||||||||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  363 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 13224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 31133222 - 31133396
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||| | |||||||| ||||||||| ||||||||||||||    
T  31133222 cttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttgttg 31133321  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  31133322 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacctcttatgct 31133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 261 - 433
Target Start/End: Original strand, 11656457 - 11656630
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||   ||||||||||||||||||||| |||||||||||    
T  11656457 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttgttg 11656556  T
Q  361 catttttcgtcctaccccccattttattctcc-aaaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  11656557 catttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccccttatg 11656630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 9178178 - 9178005
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| || |||||| |||||| | |||||||||||||||||| ||||||||||||||    
T  9178178 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgttg 9178079  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||| || || |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  9178078 catttttcatctta-cccccattttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 13225182 - 13225023
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  13225182 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 13225083  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  13225082 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 262 - 419
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||| ||  |||| |  ||||| ||||||||||||||| |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 19176292 - 19176451
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  19176292 cttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 19176391  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||| ||| || ||||| |  ||||| |||||||||||||||||| ||||||    
T  19176392 catttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 255 - 419
Target Start/End: Original strand, 44831243 - 44831408
Alignment:
Q  255 ttaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattt 354  Q
    ||||| |||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||    
T  44831243 ttaaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcattt 44831342  T
Q  355 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  44831343 ttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 262 - 435
Target Start/End: Complemental strand, 4630328 - 4630161
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||| || |||||||||||  ||||||||||| |||||||||  |||||||| | || | |||||||||||||||||      ||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattat------tgttgc 4630235  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4630234 atttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccccctatgct 4630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 250 - 419
Target Start/End: Complemental strand, 11657011 - 11656841
Alignment:
Q  250 taaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattat 349  Q
    |||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||||| | |||||||||| | ||||||| ||||||||||||||    
T  11657011 taaaataaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattat 11656912  T
Q  350 catttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||  |||||||||    
T  11656911 catttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 262 - 419
Target Start/End: Complemental strand, 12572393 - 12572235
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||| | ||||||||||||||||||||||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||  |||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 261 - 417
Target Start/End: Complemental strand, 34541091 - 34540934
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||    
T  34541091 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttg 34540992  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttt 417  Q
    |||||||||||||||| || ||||| |  ||  | |||||||||||||||| ||||||    
T  34540991 catttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatgatagtttt 34540934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 33328683 - 33328524
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||| ||| |||||||| |  ||||| ||||||||||||||| |||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 306 - 433
Target Start/End: Complemental strand, 33743417 - 33743290
Alignment:
Q  306 tggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagaga 405  Q
    |||| ||||| |||||||| | |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagaga 33743318  T
Q  406 aatgacagttttagacctaccccctatg 433  Q
    ||| |||||||||||||||| |||||||    
T  33743317 aataacagttttagacctactccctatg 33743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 41681677 - 41681518
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||    
T  41681677 cttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 41681578  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    ||||||||||||||||  | ||||| |  ||||| |||||||||||||||  ||||||||    
T  41681577 catttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttag 41681518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 261 - 418
Target Start/End: Complemental strand, 31133763 - 31133605
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  31133763 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttg 31133664  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 418  Q
    ||||||||||| |||| || ||||| |  ||||| ||| ||||||||||||| ||||||    
T  31133663 catttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 261 - 419
Target Start/End: Original strand, 33742924 - 33743082
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||| | ||| |||||||| ||||||||||||||||| ||    
T  33742924 cttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttttgatg 33743022  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| || | ||| |||||||||||||||||||||||||    
T  33743023 catttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 261 - 413
Target Start/End: Original strand, 4629799 - 4629952
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||| |||||||  | ||||||||||||  || |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||    
T  4629799 cttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcatttttattg 4629898  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacag 413  Q
    ||||||||||| |||| || ||||| |  ||||| ||||||| |||||||||||    
T  4629899 catttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 261 - 367
Target Start/End: Complemental strand, 11337065 - 11336959
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||||||||| | || ||||||||| ||||||||||||||||||||    
T  11337065 cttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttgttg 11336966  T
Q  361 cattttt 367  Q
    |||||||    
T  11336965 cattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 262 - 397
Target Start/End: Original strand, 10918129 - 10918264
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||| |||| |||||||||||||| | ||||||||||| ||||| ||||   |||||| | | |||||  ||||||||| |||||||||||||||    
T  10918129 ttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttttgttgc 10918228  T
Q  362 atttttcgtcctaccccccattttattctccaaaaa 397  Q
    ||||||| || ||||||||||||||| |||||||||    
T  10918229 atttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 338 - 400
Target Start/End: Original strand, 43958264 - 43958326
Alignment:
Q  338 tccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacgc 43958326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 400
Target Start/End: Complemental strand, 8074094 - 8073956
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||| ||| ||||||||||||||||||||||  || |||||||| || || || |||||||||| | |||||||   |||||||||||||| ||||||||    
T  8074094 cttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttgttg 8073996  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    |||||| ||||  | |||||||||||  ||||||||||||    
T  8073995 cattttacgtcaaaacccccattttaccctccaaaaacgc 8073956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 419
Target Start/End: Original strand, 9177724 - 9177793
Alignment:
Q  351 atttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||||| ||| ||| |||||||| |  ||||| ||||| |||||||||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttag 9177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 18805292 - 18805337
Alignment:
Q  389 ctccaaaaacgcagagaaatgacagttttagacctaccccctatgc 434  Q
    ||||| |||| |||||||||||||||||||||| ||||||||||||    
T  18805292 ctccagaaacacagagaaatgacagttttagacttaccccctatgc 18805337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 10919740 - 10919700
Alignment:
Q  250 taaaattaagacttaattacacttttggtcctcgtgttttg 290  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  10919740 taaaattaaggcttaattatacttttggtcctcgtgttttg 10919700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 291
Target Start/End: Original strand, 9177669 - 9177699
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttgg 291  Q
    |||||||||||||||||||||||||||||||    
T  9177669 cttaattacacttttggtcctcgtgttttgg 9177699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 43958208 - 43958254
Alignment:
Q  258 agacttaattacacttttggtcctcgtgttttggtttactcacgaaa 304  Q
    ||||||||||| |||||||||| |||||||||| | |||||||||||    
T  43958208 agacttaattatacttttggtcttcgtgttttgatctactcacgaaa 43958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 145; Significance: 4e-76; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 261 - 433
Target Start/End: Original strand, 1669 - 1841
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||||||    
T  1669 cttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttgttg 1768  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1769 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 2210 - 2051
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  2210 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 2111  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  2110 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 134216 - 134042
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||| ||||||||||| | | ||||||||| ||||||||||| |||||||||||    
T  134216 cttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttgttg 134117  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  134116 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 134042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 134; Significance: 1e-69; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 258 - 435
Target Start/End: Original strand, 752 - 928
Alignment:
Q  258 agacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttg 357  Q
    |||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| |||||    
T  752 agacttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttg 850  T
Q  358 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||    
T  851 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccccttatgct 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 261 - 428
Target Start/End: Complemental strand, 1284 - 1116
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  1284 cttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 1185  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    ||| |||||||||||| || ||||| |  | ||| ||||||||| ||||| |||||||||||| |||||    
T  1184 catctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccacccc 1116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 130; Significance: 3e-67; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 262 - 435
Target Start/End: Complemental strand, 10414 - 10242
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  10314 atttttcgtcctac-ccccattttattctccaaaaattcagagaaatgacagttttaaacctaccccctatgct 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 257 - 366
Target Start/End: Original strand, 9930 - 10039
Alignment:
Q  257 aagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 356  Q
    |||| ||||||||| |||||||||||||||||| |  || ||||||||||| || ||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  9930 aagatttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaatttt 10029  T
Q  357 gttgcatttt 366  Q
    ||| ||||||    
T  10030 gttacatttt 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 128; Significance: 5e-66; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 261 - 435
Target Start/End: Complemental strand, 42701 - 42528
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||| |||||||| |||||||||||||| |||||| ||||||| | |||||||||||||| | ||||||||||||||||| ||||||||||||||     
T  42701 cttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgttt 42602  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42601 catttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 42528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 262 - 428
Target Start/End: Original strand, 42172 - 42339
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    |||||||||||||| || ||||||||||||| || ||||||||||| ||||||| |||||||| | |||||||||||| |||||||||||||||||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  362 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctacccc 428  Q
    |||||| ||| |||| || ||||| |  || || ||||||||||||||||||||||||||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctacccc 42339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 118; Significance: 5e-60; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 278 - 435
Target Start/End: Original strand, 10640 - 10797
Alignment:
Q  278 tcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccc 377  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  378 cccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 435  Q
     ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  10740 tccattttattctccaaaaatgcagagaaatgacagttttagacgtaccccctatgct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 261 - 419
Target Start/End: Complemental strand, 11166 - 11007
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11166 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 11067  T
Q  361 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    |||||||||||||||| || ||||| |  ||| | ||||||||||||||  |||||||||    
T  11066 catttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttag 11007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 116; Significance: 8e-59; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 251 - 426
Target Start/End: Original strand, 18827 - 19001
Alignment:
Q  251 aaaattaagacttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatc 350  Q
    ||||| ||| ||| |||||||||||||||||  ||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  18827 aaaataaaggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatc 18926  T
Q  351 atttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 426  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  18927 atttttgttgcatttttcatccta-cccccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 19164 - 19069
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcattttt 356  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  19164 cttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 328 - 435
Target Start/End: Original strand, 16565 - 16672
Alignment:
Q  328 aacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 427  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16565 aacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 16664  T
Q  428 cctatgct 435  Q
    ||||||||    
T  16665 cctatgct 16672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 276 - 419
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  276 ggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 375  Q
    |||||||||||||||  ||||||||||||||| ||| ||| |||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  376 cccccatttt-attctccaaaaacgcagagaaatgacagttttag 419  Q
    | || ||||| |  ||||| |||||||||||||| ||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 263 - 385
Target Start/End: Complemental strand, 28784 - 28662
Alignment:
Q  263 taattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgca 362  Q
    ||||||||||||||||| |||||||||||  |||| |||||||||||| ||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  28784 taattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 28685  T
Q  363 tttttcgtcctaccccccatttt 385  Q
     |||||||||| |||||||||||    
T  28684 gttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 262 - 400
Target Start/End: Complemental strand, 62000 - 61862
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||   || ||||| |||||||||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  362 atttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  61900 atttttcgtcctaccccccattttgtcctccaaaaacgc 61862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 61030 - 61102
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaa 333  Q
    ||||| |||||||||| ||||||||||||||  ||||||||||| || ||||||| |||||||||| ||||||    
T  61030 cttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 261 - 401
Target Start/End: Original strand, 569 - 709
Alignment:
Q  261 cttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttg 360  Q
    |||||||||||||||| ||||||||||||||  ||||||||||| || || ||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  569 cttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgttg 668  T
Q  361 catttttcgtcctaccccccattttattctccaaaaacgca 401  Q
     ||||||||||  ||| ||||||| || |||||||||||||    
T  669 tatttttcgtctcacctcccatttgatcctccaaaaacgca 709  T

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Target: scaffold0076 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  262 ttaattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgc 361  Q
    |||||||||||||||||| || ||||||||| |||| |||||||||||||| ||||||||||| | | ||||||||||||||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  362 a 362  Q
    |    
T  8451 a 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 263 - 400
Target Start/End: Original strand, 454 - 589
Alignment:
Q  263 taattacacttttggtcctcgtgttttggtttactcacgaaactggtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgca 362  Q
    |||||||| |||||||| |||||||||||  ||||||||||| ||||| ||  ||||||||| | |||| ||  ||||||||||||||||||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  363 tttttcgtcctaccccccattttattctccaaaaacgc 400  Q
    |||||||||||| | |||||||||| ||| ||||||||    
T  553 tttttcgtccta-cacccattttatcctcaaaaaacgc 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 401
Target Start/End: Complemental strand, 7784 - 7691
Alignment:
Q  308 gtcctgcccttttaaaatataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgca 401  Q
    ||||| ||||||||||| | |||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacgca 7691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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