View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18348_low_7 (Length: 433)

Name: NF18348_low_7
Description: NF18348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18348_low_7
NF18348_low_7
[»] chr5 (15 HSPs)
chr5 (96-412)||(11081555-11081871)
chr5 (349-406)||(1427692-1427749)
chr5 (352-412)||(23766855-23766915)
chr5 (352-412)||(23816703-23816763)
chr5 (352-408)||(41973467-41973523)
chr5 (346-412)||(23732159-23732225)
chr5 (347-412)||(23769639-23769704)
chr5 (347-412)||(23819487-23819552)
chr5 (350-401)||(3181713-3181764)
chr5 (354-401)||(20292995-20293042)
chr5 (354-405)||(2067052-2067103)
chr5 (354-401)||(20301443-20301490)
chr5 (354-401)||(20305856-20305903)
chr5 (354-401)||(20310260-20310307)
chr5 (62-94)||(6402077-6402109)
[»] chr3 (52 HSPs)
chr3 (18-412)||(4142127-4142521)
chr3 (18-412)||(4157937-4158331)
chr3 (18-412)||(3754267-3754658)
chr3 (209-412)||(3745866-3746066)
chr3 (219-412)||(2678392-2678582)
chr3 (221-412)||(2686305-2686496)
chr3 (349-400)||(803223-803274)
chr3 (349-412)||(989391-989454)
chr3 (349-403)||(997571-997625)
chr3 (349-403)||(1013961-1014015)
chr3 (354-406)||(2442039-2442091)
chr3 (349-412)||(1007456-1007519)
chr3 (349-412)||(1022484-1022547)
chr3 (354-401)||(2456249-2456296)
chr3 (354-405)||(2502148-2502199)
chr3 (354-401)||(2644366-2644413)
chr3 (354-401)||(2659156-2659203)
chr3 (354-401)||(13498224-13498271)
chr3 (352-406)||(2696731-2696785)
chr3 (352-401)||(968669-968718)
chr3 (356-409)||(2459277-2459330)
chr3 (353-401)||(9608348-9608396)
chr3 (354-406)||(12133097-12133149)
chr3 (354-401)||(754613-754660)
chr3 (354-401)||(771503-771550)
chr3 (354-401)||(7324435-7324482)
chr3 (354-401)||(7942485-7942532)
chr3 (354-401)||(9561989-9562036)
chr3 (355-401)||(2492083-2492129)
chr3 (355-401)||(2631358-2631404)
chr3 (352-401)||(1891068-1891117)
chr3 (355-400)||(7442982-7443027)
chr3 (364-405)||(44001605-44001646)
chr3 (352-412)||(1931147-1931207)
chr3 (352-412)||(1940572-1940632)
chr3 (78-130)||(2678671-2678723)
chr3 (62-98)||(23231271-23231307)
chr3 (366-401)||(746387-746422)
chr3 (355-406)||(768328-768379)
chr3 (354-401)||(2476634-2476681)
chr3 (354-401)||(7334243-7334290)
chr3 (356-407)||(7398177-7398228)
chr3 (354-401)||(7430540-7430587)
chr3 (354-401)||(9565833-9565880)
chr3 (354-401)||(37753349-37753396)
chr3 (354-397)||(43991960-43992003)
chr3 (352-406)||(7432053-7432107)
chr3 (354-395)||(956381-956422)
chr3 (61-130)||(2686584-2686653)
chr3 (62-115)||(23235146-23235199)
chr3 (352-412)||(1936973-1937033)
chr3 (357-397)||(9587193-9587233)
[»] scaffold0200 (1 HSPs)
scaffold0200 (352-408)||(775-831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (353-401)||(89142-89190)
[»] chr7 (5 HSPs)
chr7 (354-406)||(1078159-1078211)
chr7 (211-334)||(1078246-1078369)
chr7 (353-401)||(1421173-1421221)
chr7 (358-406)||(3927063-3927111)
chr7 (353-401)||(39298976-39299024)
[»] chr8 (1 HSPs)
chr8 (349-412)||(19727876-19727939)
[»] chr2 (10 HSPs)
chr2 (354-409)||(36577366-36577421)
chr2 (354-406)||(7160753-7160805)
chr2 (364-406)||(6538844-6538886)
chr2 (354-399)||(33026657-33026702)
chr2 (354-406)||(7156191-7156243)
chr2 (353-399)||(33038159-33038205)
chr2 (357-406)||(7168689-7168738)
chr2 (61-130)||(11237394-11237463)
chr2 (354-406)||(11237693-11237745)
chr2 (355-399)||(33020314-33020358)
[»] chr4 (4 HSPs)
chr4 (352-406)||(20019771-20019825)
chr4 (364-412)||(55419792-55419840)
chr4 (75-130)||(20020041-20020096)
chr4 (357-412)||(22672120-22672175)
[»] chr1 (3 HSPs)
chr1 (353-395)||(23896147-23896189)
chr1 (354-401)||(24629215-24629262)
chr1 (353-406)||(51381454-51381507)
[»] chr6 (10 HSPs)
chr6 (357-406)||(370784-370833)
chr6 (358-410)||(1470918-1470970)
chr6 (356-407)||(19119065-19119116)
chr6 (356-407)||(19126359-19126410)
chr6 (360-406)||(1442107-1442153)
chr6 (358-408)||(1459538-1459588)
chr6 (353-407)||(17368365-17368419)
chr6 (355-401)||(24417490-24417536)
chr6 (62-107)||(17368086-17368131)
chr6 (358-406)||(7564750-7564798)
[»] scaffold0015 (1 HSPs)
scaffold0015 (353-401)||(32333-32381)
[»] scaffold1004 (1 HSPs)
scaffold1004 (355-401)||(2144-2190)
[»] scaffold0760 (1 HSPs)
scaffold0760 (355-401)||(4639-4685)


Alignment Details
Target: chr5 (Bit Score: 293; Significance: 1e-164; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 96 - 412
Target Start/End: Original strand, 11081555 - 11081871
Alignment:
Q  96 aatatttggagaaccattcaggattatccttttggcggtcttattgttcccgttatgaaaggggaatttatgagtggcacaattaatttggttgttctct 195  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  11081555 aatatttggagaaccattcaggattatctttttggcggtcttattgttcccgttatgaaaggggaatttgtgagtggcgcaattaatttggttgttctct 11081654  T
Q  196 aatggtgttgggaatgtccacgctttattctttgtttcgatttggcaaaggagtcttatcaaaagatttcacctcctaatttggaaggggtggatgtgtg 295  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11081655 aatggtgttgggaatgtccacgctttattgtttgtttcgatttggcaaaggagtcttatcaaaagatttcacctcctaatttggaaggggtggatgtgcg 11081754  T
Q  296 taacttgtcggctttgggtgttttgagggattgcttgtgtgtgacgactactagtgatgatgtttgggttatgaaggagtatggaaataaagagtcttgg 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11081755 taacttgtcggctttgggtgttttgagggattgcttgtgtgtgacgactactagtgatgatgtttgggttatgaaggagtatggaaataaagagtcttgg 11081854  T
Q  396 actaaactgtttactat 412  Q
    |||||| ||||||||||    
T  11081855 actaaattgtttactat 11081871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 1427749 - 1427692
Alignment:
Q  349 gtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  1427749 gtgatgatgtttgggttatgaaagagtatggaaatacagagtcttggattaaactgtt 1427692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 412
Target Start/End: Complemental strand, 23766915 - 23766855
Alignment:
Q  352 atgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||| |||| |||||    
T  23766915 atgatgtttggattatgaaagaatatggaaataaagagtcttggactaaattgttcactat 23766855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 412
Target Start/End: Complemental strand, 23816763 - 23816703
Alignment:
Q  352 atgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||| |||| |||||    
T  23816763 atgatgtttggattatgaaagaatatggaaataaagagtcttggactaaattgttcactat 23816703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 408
Target Start/End: Complemental strand, 41973523 - 41973467
Alignment:
Q  352 atgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgttta 408  Q
    |||||||||||||||||||||| |||| |||||||| ||| ||||||||||||||||    
T  41973523 atgatgtttgggttatgaaggaatatgaaaataaagtgtcatggactaaactgttta 41973467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 23732159 - 23732225
Alignment:
Q  346 ctagtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    ||||| ||||||||||| |||||||||| ||||| ||||||| |||||||| ||||||||| |||||    
T  23732159 ctagtaatgatgtttggattatgaaggaatatgggaataaagcgtcttggaataaactgttcactat 23732225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 412
Target Start/End: Complemental strand, 23769704 - 23769639
Alignment:
Q  347 tagtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    |||| ||||||||||| |||||||||| ||||| ||||||| ||||||||||||| |||| |||||    
T  23769704 tagtaatgatgtttggattatgaaggaatatgggaataaagcgtcttggactaaattgttcactat 23769639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 412
Target Start/End: Complemental strand, 23819552 - 23819487
Alignment:
Q  347 tagtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    |||| ||||||||||| |||||||||| ||||| ||||||| ||||||||||||| |||| |||||    
T  23819552 tagtaatgatgtttggattatgaaggaatatgggaataaagcgtcttggactaaattgttcactat 23819487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 3181713 - 3181764
Alignment:
Q  350 tgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||| ||||    
T  3181713 tgatgatgtttggcttatgaaggaatatggaaatgaagagtcttggattaaa 3181764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 401
Target Start/End: Original strand, 20292995 - 20293042
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  20292995 gatgtttggattatgaaggaatatggaattaaagagtcttggactaaa 20293042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 405
Target Start/End: Complemental strand, 2067103 - 2067052
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgt 405  Q
    ||||||||| ||||||||||||||||||||  || |||||||| ||||||||    
T  2067103 gatgtttggattatgaaggagtatggaaatgtagggtcttggattaaactgt 2067052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Original strand, 20301443 - 20301490
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| |||||||||| |||| || |||||||||||||||||||    
T  20301443 gatgtttggattatgaaggaatatgcaattaaagagtcttggactaaa 20301490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Original strand, 20305856 - 20305903
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||| ||| |||||||||| ||||||| |||||||||||||||||||    
T  20305856 gatgtctggattatgaaggaatatggaattaaagagtcttggactaaa 20305903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Original strand, 20310260 - 20310307
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||| ||| |||||||||| ||||||| |||||||||||||||||||    
T  20310260 gatgtctggattatgaaggaatatggaattaaagagtcttggactaaa 20310307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 6402109 - 6402077
Alignment:
Q  62 caaaactcaagtaatggttcatactttgggtac 94  Q
    |||||||||||| ||||||||||||||||||||    
T  6402109 caaaactcaagttatggttcatactttgggtac 6402077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 18 - 412
Target Start/End: Complemental strand, 4142521 - 4142127
Alignment:
Q  18 gttcttgactaccaatttcttgatgaggatgatagttttgttaacaaaactcaagtaatggttcatactttgggtactaatatttggagaaccattcagg 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4142521 gttcttgactaccaatttcttgatgaggattatagttttgttaacaaaactcaagtaatggttcatactttgggtactaatatatggagaaccattcagg 4142422  T
Q  118 attatccttttggcggtcttattgttcccgttatgaaaggggaatttatgagtggcacaattaatttggttgttctctaatgg-tgttgggaatgtccac 216  Q
    | ||||||||||| ||||||  |||||| |||| ||| ||||||||| |||||||||||||||||| ||||||||||  | |  |  | ||||||||||     
T  4142421 agtatccttttggaggtcttcctgttccagttaagaagggggaatttgtgagtggcacaattaatt-ggttgttctccgaagaatcattggaatgtccat 4142323  T
Q  217 gctttattctttgtttcgatttggcaaaggagtcttatcaaaagatttcacctcctaatttggaaggggtggatgtgtgtaacttgtcggctttgggtgt 316  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  || ||||||||| |||||||||    
T  4142322 gctttattgtttcttttgatttggcaaaggagtcttatcaaaagatttcacctcctaatttgggaggggtggatgttggtgacttgtcggttttgggtgt 4142223  T
Q  317 tttgagggattgcttgtgtgtgacgactactagtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    |||||||||||||||||| ||||||||| || |  ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||| |||||    
T  4142222 tttgagggattgcttgtgcgtgacgacttctggctatgatgtttggcttatgaaggaatatggaaataaagagtcttggactaaattgttcactat 4142127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 412
Target Start/End: Complemental strand, 4158331 - 4157937
Alignment:
Q  18 gttcttgactaccaatttcttgatgaggatgatagttttgttaacaaaactcaagtaatggttcatactttgggtactaatatttggagaaccattcagg 117  Q
    |||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4158331 gttcttgaatacctagttcttgatgaggatgatagtttttttaacaaaactcaagtaaaggttcatactttgggtactaatatttggagaaccattcagg 4158232  T
Q  118 attatccttttggcggtcttattgttcccgttatgaaaggggaatttatgagtggcacaattaatttggttgttctctaatg----gtgttgggaatgtc 213  Q
    | |||| ||||||||||||||||||||||   ||||| ||||||||| ||||||| || ||||||| ||||||||||||| |    ||  ||||||| ||    
T  4158231 actatcattttggcggtcttattgttccc---atgaagggggaatttgtgagtggtacgattaatt-ggttgttctctaaagagcagttctgggaatatc 4158136  T
Q  214 cacgctttattctttgtttcgatttggcaaaggagtcttatcaaaagatttcacctcctaatttggaaggggtggatgtgtgtaacttgtcggctttggg 313  Q
    || |||||||| |||  || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  4158135 catgctttattgtttcatttgatttggcaaaggagtcttatcaaaagatttcacctcctaatttgggaggggtggatgtgtgtgacttgtcggctttggg 4158036  T
Q  314 tgttttgagggattgcttgtgtgtgacgactactagtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    ||||||||||||||||||||| ||||| ||| || || ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||| |||||    
T  4158035 tgttttgagggattgcttgtgcgtgaccacttctggttatgatgtttggcttatgaaggaatatggaaataaagagtcttggactaaattgttcactat 4157937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 18 - 412
Target Start/End: Original strand, 3754267 - 3754658
Alignment:
Q  18 gttcttgactaccaatttcttgatgaggatgatagttttgttaacaaaactcaagtaatggttcatactttgggtactaatatttggagaaccattcagg 117  Q
    ||||||| ||||| | |||||||||||||| |||| ||| ||||||||| | |||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  3754267 gttcttgcctacctagttcttgatgaggattataggttttttaacaaaaataaagtaaaggttcatactttgggtactaatatatggagaaccatccagg 3754366  T
Q  118 attatccttttggcggtcttattgttcccgttatgaaaggggaatttatgagtggcacaattaatttggttgttctctaatgg-tgttgggaatgtccac 216  Q
    | ||||||||||| ||||||  |||||| |||||||| ||||||||| |||||||||||||||||| ||||||| ||  | |  |  | |||||||||||    
T  3754367 actatccttttggaggtcttcctgttccagttatgaagggggaatttgtgagtggcacaattaatt-ggttgttgtccgaagaatcatcggaatgtccac 3754465  T
Q  217 gctttattctttgtttcgatttggcaaaggagtcttatcaaaagatttcacctcctaatttggaaggggtggatgtgtgtaacttgtcggctttgggtgt 316  Q
    |||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||| ||||    
T  3754466 gctttattgtttcttttgatttggcaaaggagtcatatcaaaagatttcacctcctaatttgggaggggtggatgtgtgtgacatgtcggctttgagtgt 3754565  T
Q  317 tttgagggattgcttgtgtgtgacgactactagtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    |||||||||||||||||| ||   |||| || ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  3754566 tttgagggattgcttgtgcgt---gacttctggtgttgatgtttgggttatgaaggaatatggaaataaagagtcttggactaaattgtttactat 3754658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 209 - 412
Target Start/End: Original strand, 3745866 - 3746066
Alignment:
Q  209 atgtccacgctttattctttgtttcgatttggcaaaggagtcttatcaaaagatttcacctcctaatttggaaggggtggatgtgtgtaacttgtcggct 308  Q
    ||||||| |||||||| ||| ||| ||||||||||||||| ||| |||||||||||||||||||| | | | |||| | ||||||||| |||||||| ||    
T  3745866 atgtccatgctttattgtttcttttgatttggcaaaggagacttttcaaaagatttcacctcctagtattggagggatagatgtgtgtgacttgtcgtct 3745965  T
Q  309 ttgggtgttttgagggattgcttgtgtgtgacgactactagtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgttta 408  Q
    ||||||||||| |||||||||||||| ||   |||| || |||||||| ||||| |||||||||| |||| |||  ||||||||||||||||| |||| |    
T  3745966 ttgggtgttttaagggattgcttgtgcgt---gacttctggtgatgatatttggattatgaaggaatatgcaaagcaagagtcttggactaaattgttga 3746062  T
Q  409 ctat 412  Q
    ||||    
T  3746063 ctat 3746066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 412
Target Start/End: Complemental strand, 2678582 - 2678392
Alignment:
Q  219 tttattctttgtttcgatttggcaaaggagtcttatcaaaagatttcacctcctaatttggaaggggtggatgtgtgtaacttgtcggctttgggtgttt 318  Q
    |||||| ||| ||| ||||||||||| ||||||||||||||| | |||||||||| ||  | |||||   ||||| ||||  || |  | ||||||||||    
T  2678582 tttattgtttcttttgatttggcaaaagagtcttatcaaaagctatcacctcctagttatggaggggcaaatgtgggtaaaatgcctaccttgggtgttt 2678483  T
Q  319 tgagggattgcttgtgtgtgacgactactagtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    ||| ||||||||||||  ||||   |  | ||||||||||||||||||||||  | |||||||| |||||||| ||||||||| |||| |||||    
T  2678482 tgaaggattgcttgtgcttgac---ttgtggtgatgatgtttgggttatgaaacaatatggaaaaaaagagtcatggactaaattgttcactat 2678392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 412
Target Start/End: Complemental strand, 2686496 - 2686305
Alignment:
Q  221 tattctttgtttcgatttggcaaaggagtcttatcaaaagatttcacctcctaatttggaaggggtggatgtgtgtaacttgtcggctttgggtgttttg 320  Q
    |||| ||| ||| ||||||||||| ||||||||||||||||| || ||||||| ||  | |||||| ||||| |||||| ||    | ||||||||||||    
T  2686496 tattgtttcttttgatttggcaaaagagtcttatcaaaagatatcccctcctagttatggaggggtagatgtctgtaacatgcttaccttgggtgttttg 2686397  T
Q  321 agggattgcttgtgtgtgacgactactagtgatgatgtttggg---ttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    |||||||| |||||  |||   ||  | |||||||||||||||   |||||||||| |||||||| ||||||||||||| |||| |||| |||||    
T  2686396 agggattgtttgtgcttga--tct-gtggtgatgatgtttgggttattatgaaggaatatggaaaaaaagagtcttggaataaattgttcactat 2686305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 349 - 400
Target Start/End: Complemental strand, 803274 - 803223
Alignment:
Q  349 gtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaa 400  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  803274 gtgatgatgtttgggttatgaaagaatatggaaataaagagtcttggactaa 803223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 989391 - 989454
Alignment:
Q  349 gtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    |||||||||||||||| ||||| ||||| |||||||||||||||||||||||| |||| |||||    
T  989391 gtgatgatgtttgggtaatgaaagagtacggaaataaagagtcttggactaaattgttcactat 989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 403
Target Start/End: Original strand, 997571 - 997625
Alignment:
Q  349 gtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaact 403  Q
    |||||| ||||||||| |||||||| |||||||||||||||||||||||||||||    
T  997571 gtgatgttgtttgggtaatgaaggaatatggaaataaagagtcttggactaaact 997625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 403
Target Start/End: Original strand, 1013961 - 1014015
Alignment:
Q  349 gtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaact 403  Q
    |||||| ||||||||| |||||||| |||||||||||||||||||||||||||||    
T  1013961 gtgatgttgtttgggtaatgaaggaatatggaaataaagagtcttggactaaact 1014015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 406
Target Start/End: Original strand, 2442039 - 2442091
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  2442039 gatgtttggattatgaaggagtatggaaataaagattcttggactaaattgtt 2442091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 1007456 - 1007519
Alignment:
Q  349 gtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    |||||||||||||||| |||||||| ||||||||||| ||||| ||||||||| |||| |||||    
T  1007456 gtgatgatgtttgggtaatgaaggaatatggaaataacgagtcctggactaaattgttcactat 1007519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 1022484 - 1022547
Alignment:
Q  349 gtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    |||||||||||||||| |||||||| ||||||||||| ||||| ||||||||| |||| |||||    
T  1022484 gtgatgatgtttgggtaatgaaggaatatggaaataacgagtcatggactaaattgttcactat 1022547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 401
Target Start/End: Original strand, 2456249 - 2456296
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  2456249 gatgtttgggttatgaaggaatatggaaataaagactcttggactaaa 2456296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 405
Target Start/End: Original strand, 2502148 - 2502199
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgt 405  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||||||||    
T  2502148 gatgtttggattatgaaggagtatggaaataaggagttttggactaaactgt 2502199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 2644413 - 2644366
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  2644413 gatgtttggattatgaaggagtatggaaatcaagagtcttggactaaa 2644366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 2659203 - 2659156
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  2659203 gatgtttggattatgaaggagtatggaaatcaagagtcttggactaaa 2659156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 401
Target Start/End: Original strand, 13498224 - 13498271
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||    
T  13498224 gatgtttggattatgaaggaatatggaaataaagagtcttggactaaa 13498271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 352 - 406
Target Start/End: Complemental strand, 2696785 - 2696731
Alignment:
Q  352 atgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||| ||||    
T  2696785 atgatgtttggattatgaaggaatatggaaataaagagtcttggattaaattgtt 2696731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 401
Target Start/End: Original strand, 968669 - 968718
Alignment:
Q  352 atgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||||||||||||||||  |||||||||||||||| |||||||||    
T  968669 atgatgtttgggttatgaaggaacatggaaataaagagtcatggactaaa 968718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 409
Target Start/End: Original strand, 2459277 - 2459330
Alignment:
Q  356 tgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttac 409  Q
    ||||||| |||||||||| ||||||||||||||||||||||| ||| |||||||    
T  2459277 tgtttggattatgaaggaatatggaaataaagagtcttggacaaaattgtttac 2459330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 9608396 - 9608348
Alignment:
Q  353 tgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||    
T  9608396 tgatgtttgggttatgaaggaatatggaaatatagattcttggactaaa 9608348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 406
Target Start/End: Original strand, 12133097 - 12133149
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||||| ||||    
T  12133097 gatgtttgggttatgagggagtatggaaatagagagtcgtggactaaattgtt 12133149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 754660 - 754613
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| ||||||||||||||||| || |||||||||||||||||    
T  754660 gatgtttggattatgaaggagtatggagatcaagagtcttggactaaa 754613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 771550 - 771503
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||||||    
T  771550 gatgtttgggttatgaaggaatatggaaatacagactcttggactaaa 771503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 7324482 - 7324435
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||||    
T  7324482 gatgtttggattatgaaggactacggaaataaagagtcttggactaaa 7324435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 401
Target Start/End: Original strand, 7942485 - 7942532
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| |||||||||||||||| |||||||||||||||| ||||    
T  7942485 gatgtttggattatgaaggagtatggtaataaagagtcttggattaaa 7942532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 9562036 - 9561989
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  9562036 gatgtttggattatgaatgagtatggaaatcaagagtcttggactaaa 9561989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 401
Target Start/End: Original strand, 2492083 - 2492129
Alignment:
Q  355 atgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||||    
T  2492083 atgtttggattatgaaggagtatggaaatcgagagtcttggactaaa 2492129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 401
Target Start/End: Original strand, 2631358 - 2631404
Alignment:
Q  355 atgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    |||||||| |||||||||| ||||||||| |||||||||||||||||    
T  2631358 atgtttggattatgaaggaatatggaaatcaagagtcttggactaaa 2631404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 1891117 - 1891068
Alignment:
Q  352 atgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||||| ||||||||||  ||||||||||||| ||||||||||||    
T  1891117 atgatgtttggattatgaaggaacatggaaataaagactcttggactaaa 1891068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 7443027 - 7442982
Alignment:
Q  355 atgtttgggttatgaaggagtatggaaataaagagtcttggactaa 400  Q
    |||||||| | |||||||||||||||||| ||||||||||||||||    
T  7443027 atgtttggatcatgaaggagtatggaaatcaagagtcttggactaa 7442982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 44001605 - 44001646
Alignment:
Q  364 ttatgaaggagtatggaaataaagagtcttggactaaactgt 405  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  44001605 ttatgaaggaatatggaattaaagagtcttggactaaactgt 44001646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 412
Target Start/End: Complemental strand, 1931207 - 1931147
Alignment:
Q  352 atgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    |||||||||||||||||| |||  ||||||||||||| || ||||||||| |||| |||||    
T  1931207 atgatgtttgggttatgatggaacatggaaataaagactcctggactaaattgttcactat 1931147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 412
Target Start/End: Complemental strand, 1940632 - 1940572
Alignment:
Q  352 atgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    ||||||||||||||||||||||  |||||||| |||| || ||||||||| |||| |||||    
T  1940632 atgatgtttgggttatgaaggaacatggaaatcaagactcgtggactaaattgttcactat 1940572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 2678723 - 2678671
Alignment:
Q  78 gttcatactttgggtactaatatttggagaaccattcaggattatccttttgg 130  Q
    ||||||||||||||| ||||||||||||||| |||||| || | |||||||||    
T  2678723 gttcatactttgggttctaatatttggagaaacattcaagagtttccttttgg 2678671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 23231307 - 23231271
Alignment:
Q  62 caaaactcaagtaatggttcatactttgggtactaat 98  Q
    ||||||||||| |||||||||||||||||||||||||    
T  23231307 caaaactcaaggaatggttcatactttgggtactaat 23231271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 401
Target Start/End: Complemental strand, 746422 - 746387
Alignment:
Q  366 atgaaggagtatggaaataaagagtcttggactaaa 401  Q
    |||||||||||||||||| |||||||||||||||||    
T  746422 atgaaggagtatggaaatcaagagtcttggactaaa 746387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 406
Target Start/End: Complemental strand, 768379 - 768328
Alignment:
Q  355 atgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    |||||||| ||||||| ||||| |||||| ||||||||||||||||| ||||    
T  768379 atgtttggattatgaatgagtacggaaatgaagagtcttggactaaattgtt 768328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Original strand, 2476634 - 2476681
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| |||||||  | |||||||||||||||||||||||||||    
T  2476634 gatgtttggattatgaaacactatggaaataaagagtcttggactaaa 2476681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 7334290 - 7334243
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| | |||||||| || ||||||||||||||||||||||||    
T  7334290 gatgtttggatcatgaaggactacggaaataaagagtcttggactaaa 7334243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 407
Target Start/End: Complemental strand, 7398228 - 7398177
Alignment:
Q  356 tgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgttt 407  Q
    ||||||| | |||||||||||||||||| |||||||||||| |||| |||||    
T  7398228 tgtttggttgatgaaggagtatggaaatgaagagtcttggattaaattgttt 7398177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 7430587 - 7430540
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| |||||||| |||||||||||||| |||||| |||||||    
T  7430587 gatgtttggattatgaagaagtatggaaataaaaagtcttagactaaa 7430540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 9565880 - 9565833
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| ||||||||||||| ||| || |||||||||||||||||    
T  9565880 gatgtttggattatgaaggagtacggagatcaagagtcttggactaaa 9565833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 37753396 - 37753349
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| ||||| |||| |||||||| ||||||||||||||||||    
T  37753396 gatgtttggattatggaggaatatggaaagaaagagtcttggactaaa 37753349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 397
Target Start/End: Original strand, 43991960 - 43992003
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggac 397  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||    
T  43991960 gatgtttggattatgaaggaatatggaaatatagagtcttggac 43992003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 406
Target Start/End: Complemental strand, 7432107 - 7432053
Alignment:
Q  352 atgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    |||||||||||  ||||||||| |||||||||||||| || ||||||||| ||||    
T  7432107 atgatgtttggagtatgaaggaatatggaaataaagaatcgtggactaaattgtt 7432053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 395
Target Start/End: Original strand, 956381 - 956422
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttgg 395  Q
    ||||||||| |||||||||| |||||||| ||||||||||||    
T  956381 gatgtttggattatgaaggaatatggaaaaaaagagtcttgg 956422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 2686653 - 2686584
Alignment:
Q  61 acaaaactcaagtaatggttcatactttgggtactaatatttggagaaccattcaggattatccttttgg 130  Q
    ||||| || |||||| |||||||||||||||| |||||||||||| || ||| || || | |||||||||    
T  2686653 acaaatctgaagtaaaggttcatactttgggttctaatatttggaaaaacatccatgagtttccttttgg 2686584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 23235199 - 23235146
Alignment:
Q  62 caaaactcaagtaatggttcatactttgggtactaatatttggagaaccattca 115  Q
    |||||||||||  ||||||||||||||||||||||||   |||||||| |||||    
T  23235199 caaaactcaaggcatggttcatactttgggtactaattcatggagaacaattca 23235146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 412
Target Start/End: Complemental strand, 1937033 - 1936973
Alignment:
Q  352 atgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    |||||||||||||||||||||| |||  ||||||||| || ||| ||||| |||| |||||    
T  1937033 atgatgtttgggttatgaaggaatataaaaataaagaatcctggtctaaattgttcactat 1936973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 397
Target Start/End: Complemental strand, 9587233 - 9587193
Alignment:
Q  357 gtttgggttatgaaggagtatggaaataaagagtcttggac 397  Q
    |||||| |||||||||| ||||||||||||||| |||||||    
T  9587233 gtttggattatgaaggaatatggaaataaagagccttggac 9587193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 408
Target Start/End: Complemental strand, 831 - 775
Alignment:
Q  352 atgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgttta 408  Q
    |||||||||||||||||||||| |||| |||||||| ||| ||||||||||||||||    
T  831 atgatgtttgggttatgaaggaatatgaaaataaagtgtcatggactaaactgttta 775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 401
Target Start/End: Original strand, 89142 - 89190
Alignment:
Q  353 tgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||    
T  89142 tgatatttgggttatgaaggaatatggaaataaagagtcttggactaaa 89190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 406
Target Start/End: Complemental strand, 1078211 - 1078159
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  1078211 gatgtttgggttatgaaggagtatggaaatagagagtcgtggactaaattgtt 1078159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 334
Target Start/End: Complemental strand, 1078369 - 1078246
Alignment:
Q  211 gtccacgctttattctttgtttcgatttggcaaaggagtcttatcaaaagatttcacctcctaatttggaaggggtggatgtgtgtaacttgtcggcttt 310  Q
    |||| ||||||||| ||| ||| ||||||| ||| || |||||||||||| |||  |||||| |||  | |||||| ||||||||| |||| |  || ||    
T  1078369 gtcctcgctttattgtttcttttgatttgggaaaagaatcttatcaaaaggttttgcctcctgattatggaggggtagatgtgtgtcacttcttagcctt 1078270  T
Q  311 gggtgttttgagggattgcttgtg 334  Q
    |||||| |||||||||||||||||    
T  1078269 gggtgtgttgagggattgcttgtg 1078246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 1421221 - 1421173
Alignment:
Q  353 tgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    |||||||||| |||||||||| || ||||||||||||||||||| ||||    
T  1421221 tgatgtttggcttatgaaggaatacggaaataaagagtcttggattaaa 1421173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 406
Target Start/End: Original strand, 3927063 - 3927111
Alignment:
Q  358 tttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    |||||||||||||||| |||||||||||| | |||||||||||| ||||    
T  3927063 tttgggttatgaaggattatggaaataaaaattcttggactaaattgtt 3927111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 401
Target Start/End: Original strand, 39298976 - 39299024
Alignment:
Q  353 tgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||||||||    
T  39298976 tgatgtttgggttttgaaggaatgtggaaataaagagtcctggactaaa 39299024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 19727876 - 19727939
Alignment:
Q  349 gtgatgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    |||||||||||||||||||||  || |||| |||||||||||| |||||||||||||| |||||    
T  19727876 gtgatgatgtttgggttatgacagaatatgcaaataaagagtcatggactaaactgttcactat 19727939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 409
Target Start/End: Original strand, 36577366 - 36577421
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttac 409  Q
    ||||||||| |||||||||| |||||||||||||||||||||| |||| |||||||    
T  36577366 gatgtttggattatgaaggaatatggaaataaagagtcttggattaaattgtttac 36577421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 406
Target Start/End: Complemental strand, 7160805 - 7160753
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||| ||||    
T  7160805 gatgtttggcttatgaaggagtatggaaataatgattcttggactaaattgtt 7160753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 406
Target Start/End: Original strand, 6538844 - 6538886
Alignment:
Q  364 ttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    ||||||||||||||||||||||||| |||||||||||| ||||    
T  6538844 ttatgaaggagtatggaaataaagattcttggactaaattgtt 6538886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 33026657 - 33026702
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggacta 399  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||    
T  33026657 gatgtttgggttatgaagcaatatggaaataaaaagtcttggacta 33026702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 406
Target Start/End: Complemental strand, 7156243 - 7156191
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    ||||||||| |||||||||||||||||||| |||| |||||| ||||| ||||    
T  7156243 gatgtttggcttatgaaggagtatggaaatgaagattcttgggctaaattgtt 7156191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 33038159 - 33038205
Alignment:
Q  353 tgatgtttgggttatgaaggagtatggaaataaagagtcttggacta 399  Q
    |||||||||| |||||||||| |||||||| ||| ||||||||||||    
T  33038159 tgatgtttggattatgaaggaatatggaaacaaaaagtcttggacta 33038205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 7168738 - 7168689
Alignment:
Q  357 gtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    |||||| |||||||||| ||||||||||| || |||||||||||| ||||    
T  7168738 gtttggcttatgaaggaatatggaaataacgattcttggactaaattgtt 7168689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 11237394 - 11237463
Alignment:
Q  61 acaaaactcaagtaatggttcatactttgggtactaatatttggagaaccattcaggattatccttttgg 130  Q
    ||||||||||||| | ||| |||||||||||||| ||| |||||||||  ||||| ||||  ||||||||    
T  11237394 acaaaactcaagtgaaggtccatactttgggtaccaatttttggagaaggattcatgatttaccttttgg 11237463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 406
Target Start/End: Original strand, 11237693 - 11237745
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    ||||||||| ||||| ||||||||||||||| |||  ||||||||||| ||||    
T  11237693 gatgtttggcttatggaggagtatggaaatagagaaacttggactaaattgtt 11237745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 33020314 - 33020358
Alignment:
Q  355 atgtttgggttatgaaggagtatggaaataaagagtcttggacta 399  Q
    |||| ||| |||||||||| |||||||||||| ||||||||||||    
T  33020314 atgtgtggattatgaaggaatatggaaataaaaagtcttggacta 33020358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 406
Target Start/End: Complemental strand, 20019825 - 20019771
Alignment:
Q  352 atgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    ||||||||||||| |||||||| ||||||| | ||||||||||||||||| ||||    
T  20019825 atgatgtttgggtcatgaaggaatatggaattcaagagtcttggactaaattgtt 20019771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 412
Target Start/End: Original strand, 55419792 - 55419840
Alignment:
Q  364 ttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    |||||||||  |||||||||||||| |||||||||||| ||||||||||    
T  55419792 ttatgaaggtttatggaaataaagattcttggactaaattgtttactat 55419840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 20020096 - 20020041
Alignment:
Q  75 atggttcatactttgggtactaatatttggagaaccattcaggattatccttttgg 130  Q
    ||||||||||| |||||||||||| |||||| || ||||||||| | |||||||||    
T  20020096 atggttcataccttgggtactaatttttggaaaagcattcaggagtgtccttttgg 20020041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 412
Target Start/End: Complemental strand, 22672175 - 22672120
Alignment:
Q  357 gtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttactat 412  Q
    |||||||| |||||||| ||||||||||| || |||||||||||| |||| |||||    
T  22672175 gtttgggtaatgaaggaatatggaaataaggaatcttggactaaattgttcactat 22672120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 395
Target Start/End: Complemental strand, 23896189 - 23896147
Alignment:
Q  353 tgatgtttgggttatgaaggagtatggaaataaagagtcttgg 395  Q
    |||||||||| |||||||||| |||||||||||||||||||||    
T  23896189 tgatgtttggcttatgaaggaatatggaaataaagagtcttgg 23896147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 24629262 - 24629215
Alignment:
Q  354 gatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| |||||||||| || ||||||||||||||||||| ||||    
T  24629262 gatgtttggcttatgaaggaatacggaaataaagagtcttggattaaa 24629215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 406
Target Start/End: Complemental strand, 51381507 - 51381454
Alignment:
Q  353 tgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    |||| ||||| ||||||| || ||||||||| ||||||||||||||||| ||||    
T  51381507 tgatatttggattatgaaagaatatggaaatgaagagtcttggactaaattgtt 51381454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000006; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 370833 - 370784
Alignment:
Q  357 gtttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    ||||||||||||||| | |||||||||||||| |||||||||||| ||||    
T  370833 gtttgggttatgaagaattatggaaataaagattcttggactaaattgtt 370784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 1470970 - 1470918
Alignment:
Q  358 tttgggttatgaaggagtatggaaataaagagtcttggactaaactgtttact 410  Q
    ||||||||||||| || |||||||||||||| |||||| ||||| ||||||||    
T  1470970 tttgggttatgaaagattatggaaataaagattcttggtctaaattgtttact 1470918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 407
Target Start/End: Original strand, 19119065 - 19119116
Alignment:
Q  356 tgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgttt 407  Q
    ||||||| | |||||||| ||||||||| ||||||||||||||||| |||||    
T  19119065 tgtttggttgatgaaggaatatggaaatgaagagtcttggactaaattgttt 19119116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 407
Target Start/End: Original strand, 19126359 - 19126410
Alignment:
Q  356 tgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgttt 407  Q
    ||||||| | |||||||| ||||||||| ||||||||||||||||| |||||    
T  19126359 tgtttggttgatgaaggaatatggaaatgaagagtcttggactaaattgttt 19126410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 406
Target Start/End: Complemental strand, 1442153 - 1442107
Alignment:
Q  360 tgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    |||||||||||||| ||||||| |||||| |||||||||||| ||||    
T  1442153 tgggttatgaaggattatggaattaaagattcttggactaaattgtt 1442107  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 1459588 - 1459538
Alignment:
Q  358 tttgggttatgaaggagtatggaaataaagagtcttggactaaactgttta 408  Q
    ||||||||||||| || | |||||||||||| |||||||||||| ||||||    
T  1459588 tttgggttatgaaagattttggaaataaagaatcttggactaaattgttta 1459538  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 407
Target Start/End: Original strand, 17368365 - 17368419
Alignment:
Q  353 tgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaactgttt 407  Q
    |||||||||| | ||||| |||||||||||| ||| ||||||||||||| |||||    
T  17368365 tgatgtttggctgatgaaagagtatggaaatgaagggtcttggactaaattgttt 17368419  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 401
Target Start/End: Complemental strand, 24417536 - 24417490
Alignment:
Q  355 atgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    |||||||| ||||||| || |||||||||||||| ||||||||||||    
T  24417536 atgtttggattatgaaagaatatggaaataaagaatcttggactaaa 24417490  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 17368086 - 17368131
Alignment:
Q  62 caaaactcaagtaatggttcatactttgggtactaatatttggaga 107  Q
    ||||||||||| |||| ||||||||||||||||| ||| |||||||    
T  17368086 caaaactcaaggaatgattcatactttgggtactgatacttggaga 17368131  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 406
Target Start/End: Complemental strand, 7564798 - 7564750
Alignment:
Q  358 tttgggttatgaaggagtatggaaataaagagtcttggactaaactgtt 406  Q
    |||||||||||||||| |||||||| || || |||||||||||| ||||    
T  7564798 tttgggttatgaaggattatggaaacaaggattcttggactaaattgtt 7564750  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 32381 - 32333
Alignment:
Q  353 tgatgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    |||||||||| |||||||||| |||||||||||||| ||||||| ||||    
T  32381 tgatgtttggcttatgaaggaatatggaaataaagactcttggattaaa 32333  T

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Target: scaffold1004 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1004
Description:

Target: scaffold1004; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 401
Target Start/End: Original strand, 2144 - 2190
Alignment:
Q  355 atgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| ||||||||| |||||||||  ||||||||||||||||    
T  2144 atgtttgggctatgaaggaatatggaaatgtagagtcttggactaaa 2190  T

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Target: scaffold0760 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0760
Description:

Target: scaffold0760; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 401
Target Start/End: Original strand, 4639 - 4685
Alignment:
Q  355 atgtttgggttatgaaggagtatggaaataaagagtcttggactaaa 401  Q
    ||||||||| ||||||||| |||||||||  ||||||||||||||||    
T  4639 atgtttgggctatgaaggaatatggaaatgtagagtcttggactaaa 4685  T

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