View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18348_low_9 (Length: 388)

Name: NF18348_low_9
Description: NF18348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18348_low_9
NF18348_low_9
[»] chr3 (53 HSPs)
chr3 (1-243)||(25306911-25307156)
chr3 (24-162)||(25278845-25278990)
chr3 (262-372)||(41443107-41443217)
chr3 (165-262)||(25279148-25279245)
chr3 (264-371)||(4494154-4494261)
chr3 (296-372)||(29525942-29526018)
chr3 (272-372)||(34307457-34307557)
chr3 (278-364)||(39713961-39714047)
chr3 (264-372)||(9692772-9692880)
chr3 (264-351)||(5244275-5244362)
chr3 (262-372)||(20547906-20548017)
chr3 (262-372)||(27541418-27541529)
chr3 (264-358)||(34456837-34456931)
chr3 (269-372)||(32362985-32363086)
chr3 (264-351)||(288772-288859)
chr3 (264-351)||(5114124-5114211)
chr3 (264-371)||(27168599-27168706)
chr3 (271-372)||(44856006-44856108)
chr3 (262-323)||(6178391-6178452)
chr3 (262-371)||(33472336-33472445)
chr3 (296-372)||(31104743-31104819)
chr3 (264-351)||(38926674-38926761)
chr3 (264-351)||(41505537-41505624)
chr3 (264-351)||(52254076-52254163)
chr3 (264-314)||(10811182-10811232)
chr3 (296-370)||(32145904-32145978)
chr3 (289-351)||(41309188-41309250)
chr3 (269-351)||(52939702-52939784)
chr3 (264-317)||(26452694-26452747)
chr3 (269-370)||(34064024-34064125)
chr3 (264-372)||(35597208-35597317)
chr3 (262-323)||(45711405-45711466)
chr3 (262-323)||(50314669-50314730)
chr3 (264-371)||(35376998-35377106)
chr3 (264-324)||(52714780-52714840)
chr3 (262-337)||(7668139-7668214)
chr3 (264-351)||(16969504-16969591)
chr3 (264-351)||(19149036-19149123)
chr3 (269-324)||(28700512-28700567)
chr3 (264-323)||(42358604-42358663)
chr3 (264-323)||(55361199-55361258)
chr3 (269-351)||(36670952-36671034)
chr3 (264-351)||(44813180-44813269)
chr3 (264-322)||(48353043-48353101)
chr3 (264-326)||(49761354-49761415)
chr3 (269-314)||(536250-536295)
chr3 (264-372)||(26014858-26014967)
chr3 (264-324)||(26550284-26550344)
chr3 (269-345)||(36755994-36756070)
chr3 (269-317)||(39629810-39629858)
chr3 (264-371)||(39697139-39697246)
chr3 (264-351)||(44413860-44413945)
chr3 (262-314)||(53871007-53871059)
[»] chr4 (58 HSPs)
chr4 (264-372)||(51255793-51255901)
chr4 (264-372)||(38519840-38519948)
chr4 (264-372)||(5386419-5386527)
chr4 (262-372)||(26600115-26600225)
chr4 (264-371)||(18315984-18316091)
chr4 (262-367)||(52204895-52205000)
chr4 (264-372)||(29227159-29227267)
chr4 (264-372)||(51577661-51577769)
chr4 (264-372)||(39158152-39158260)
chr4 (264-372)||(54000745-54000853)
chr4 (262-372)||(41262261-41262371)
chr4 (269-372)||(22813638-22813741)
chr4 (269-372)||(36130269-36130372)
chr4 (262-372)||(14443243-14443353)
chr4 (262-342)||(40348838-40348918)
chr4 (297-372)||(10147005-10147080)
chr4 (264-351)||(10250453-10250540)
chr4 (269-351)||(37997305-37997387)
chr4 (298-372)||(50506470-50506543)
chr4 (270-351)||(1816613-1816694)
chr4 (262-323)||(39440528-39440589)
chr4 (264-364)||(149409-149509)
chr4 (264-372)||(2738184-2738292)
chr4 (269-372)||(26732276-26732380)
chr4 (272-351)||(5622512-5622591)
chr4 (269-324)||(19232098-19232153)
chr4 (264-351)||(43175030-43175117)
chr4 (262-324)||(7632426-7632488)
chr4 (289-351)||(38376428-38376490)
chr4 (264-361)||(5932691-5932788)
chr4 (264-372)||(24575767-24575876)
chr4 (264-372)||(27051002-27051111)
chr4 (262-323)||(37297093-37297154)
chr4 (264-372)||(51986088-51986197)
chr4 (264-324)||(336772-336832)
chr4 (280-372)||(19651835-19651927)
chr4 (269-345)||(21025653-21025729)
chr4 (262-322)||(31574906-31574966)
chr4 (264-371)||(50831672-50831780)
chr4 (264-324)||(50890038-50890098)
chr4 (272-323)||(16019531-16019582)
chr4 (272-351)||(50608562-50608641)
chr4 (269-323)||(11068739-11068793)
chr4 (264-338)||(26910248-26910322)
chr4 (264-326)||(36123422-36123484)
chr4 (264-326)||(38338885-38338946)
chr4 (269-351)||(46213021-46213103)
chr4 (269-351)||(46634151-46634233)
chr4 (264-345)||(23369276-23369357)
chr4 (264-317)||(28458349-28458401)
chr4 (262-351)||(36177950-36178039)
chr4 (296-345)||(42395981-42396030)
chr4 (269-345)||(24509331-24509407)
chr4 (262-314)||(31559583-31559635)
chr4 (264-359)||(32696228-32696323)
chr4 (262-322)||(38381043-38381103)
chr4 (269-369)||(48494832-48494932)
chr4 (264-316)||(49585041-49585093)
[»] chr7 (43 HSPs)
chr7 (264-372)||(12007102-12007210)
chr7 (264-372)||(34978343-34978451)
chr7 (297-372)||(29723841-29723916)
chr7 (264-367)||(32777628-32777731)
chr7 (264-371)||(45419978-45420085)
chr7 (264-371)||(13152639-13152747)
chr7 (264-372)||(27570390-27570498)
chr7 (297-372)||(2008748-2008823)
chr7 (269-372)||(28249486-28249589)
chr7 (282-372)||(15325556-15325646)
chr7 (274-372)||(21103069-21103167)
chr7 (269-371)||(43807730-43807832)
chr7 (272-372)||(33845097-33845197)
chr7 (264-372)||(43081806-43081914)
chr7 (269-368)||(37352162-37352261)
chr7 (264-347)||(47448873-47448956)
chr7 (269-345)||(4292479-4292555)
chr7 (269-372)||(38956534-38956638)
chr7 (262-357)||(46880947-46881042)
chr7 (262-324)||(40854619-40854681)
chr7 (264-361)||(26749051-26749148)
chr7 (296-372)||(3148805-3148881)
chr7 (296-372)||(33057458-33057534)
chr7 (269-351)||(43025391-43025473)
chr7 (269-359)||(49128910-49129000)
chr7 (269-314)||(17945119-17945164)
chr7 (269-313)||(36703847-36703891)
chr7 (272-323)||(31445372-31445423)
chr7 (269-324)||(46578100-46578155)
chr7 (264-326)||(11564940-11565001)
chr7 (289-351)||(22918107-22918169)
chr7 (269-323)||(24532908-24532962)
chr7 (289-351)||(40112892-40112954)
chr7 (264-338)||(41989693-41989767)
chr7 (264-314)||(43942683-43942733)
chr7 (289-351)||(44895510-44895572)
chr7 (264-371)||(7817684-7817790)
chr7 (269-326)||(21559850-21559906)
chr7 (270-351)||(24614254-24614335)
chr7 (264-345)||(35822918-35822999)
chr7 (264-317)||(42584849-42584902)
chr7 (269-345)||(33776411-33776487)
chr7 (273-317)||(34507177-34507221)
[»] chr2 (39 HSPs)
chr2 (264-372)||(11965840-11965948)
chr2 (264-371)||(36587388-36587493)
chr2 (269-372)||(31578486-31578589)
chr2 (264-371)||(37316732-37316839)
chr2 (262-372)||(37731116-37731226)
chr2 (269-372)||(30831806-30831909)
chr2 (270-372)||(8847540-8847642)
chr2 (264-372)||(18254125-18254234)
chr2 (297-369)||(14871951-14872023)
chr2 (264-372)||(37003657-37003765)
chr2 (264-351)||(9207636-9207723)
chr2 (270-372)||(26481006-26481108)
chr2 (278-372)||(44239097-44239191)
chr2 (264-372)||(18510722-18510830)
chr2 (278-351)||(7698231-7698304)
chr2 (264-372)||(19916702-19916810)
chr2 (305-372)||(14877077-14877144)
chr2 (264-351)||(34945028-34945115)
chr2 (264-326)||(29449258-29449320)
chr2 (331-372)||(2427915-2427956)
chr2 (264-333)||(12889788-12889856)
chr2 (264-345)||(28245775-28245855)
chr2 (264-361)||(32944431-32944528)
chr2 (262-351)||(41195628-41195717)
chr2 (264-358)||(20911847-20911942)
chr2 (264-351)||(22416259-22416346)
chr2 (264-351)||(43487425-43487512)
chr2 (264-326)||(36802943-36803004)
chr2 (264-326)||(40937027-40937088)
chr2 (264-313)||(9760064-9760113)
chr2 (264-329)||(19109053-19109118)
chr2 (264-317)||(36774585-36774638)
chr2 (269-314)||(41042305-41042350)
chr2 (264-317)||(42372526-42372579)
chr2 (264-361)||(43057111-43057208)
chr2 (289-372)||(2076640-2076724)
chr2 (264-324)||(9194287-9194347)
chr2 (269-317)||(14328433-14328481)
chr2 (264-324)||(19843531-19843591)
[»] chr1 (40 HSPs)
chr1 (264-372)||(48983584-48983692)
chr1 (264-370)||(47642525-47642631)
chr1 (264-372)||(48858870-48858978)
chr1 (264-372)||(7918978-7919086)
chr1 (264-372)||(40439756-40439864)
chr1 (264-372)||(4213119-4213227)
chr1 (264-367)||(17082664-17082767)
chr1 (270-364)||(23332322-23332416)
chr1 (264-361)||(4857957-4858054)
chr1 (264-372)||(38878817-38878925)
chr1 (264-372)||(42468639-42468747)
chr1 (264-372)||(5771660-5771772)
chr1 (269-372)||(31088232-31088336)
chr1 (270-372)||(35369752-35369855)
chr1 (264-372)||(649815-649924)
chr1 (269-351)||(23645462-23645544)
chr1 (264-372)||(27464973-27465082)
chr1 (264-372)||(33100854-33100963)
chr1 (272-324)||(9988006-9988058)
chr1 (264-351)||(37619590-37619677)
chr1 (264-351)||(44519089-44519176)
chr1 (272-351)||(49065302-49065381)
chr1 (289-351)||(3981964-3982026)
chr1 (264-326)||(33054051-33054112)
chr1 (264-326)||(48220107-48220168)
chr1 (289-343)||(50726194-50726248)
chr1 (264-325)||(18336193-18336253)
chr1 (272-360)||(33076174-33076263)
chr1 (264-317)||(48326014-48326067)
chr1 (262-351)||(48470683-48470772)
chr1 (269-314)||(49660231-49660276)
chr1 (264-371)||(8200122-8200229)
chr1 (273-345)||(11597692-11597764)
chr1 (269-309)||(30735273-30735313)
chr1 (264-324)||(34818009-34818069)
chr1 (270-326)||(35136897-35136952)
chr1 (272-359)||(37588605-37588691)
chr1 (264-351)||(45640347-45640434)
chr1 (272-324)||(48261194-48261246)
chr1 (264-324)||(49570043-49570103)
[»] chr6 (23 HSPs)
chr6 (269-372)||(18065006-18065109)
chr6 (264-369)||(33712367-33712472)
chr6 (264-372)||(8645355-8645463)
chr6 (264-372)||(8505689-8505798)
chr6 (264-357)||(11635466-11635559)
chr6 (296-371)||(5739681-5739756)
chr6 (299-361)||(14910258-14910320)
chr6 (269-372)||(552844-552948)
chr6 (266-345)||(30945862-30945941)
chr6 (289-359)||(3772427-3772497)
chr6 (269-351)||(11612239-11612321)
chr6 (269-351)||(26595400-26595482)
chr6 (264-372)||(34047433-34047542)
chr6 (274-342)||(1156776-1156844)
chr6 (264-324)||(25811803-25811863)
chr6 (272-351)||(5080505-5080584)
chr6 (264-323)||(22079529-22079588)
chr6 (269-323)||(8098563-8098617)
chr6 (296-345)||(3853251-3853300)
chr6 (269-314)||(10335602-10335647)
chr6 (262-371)||(17182144-17182252)
chr6 (272-372)||(32316844-32316945)
chr6 (269-345)||(30956123-30956199)
[»] scaffold0618 (1 HSPs)
scaffold0618 (262-372)||(8869-8979)
[»] chr8 (43 HSPs)
chr8 (262-372)||(44090931-44091041)
chr8 (264-364)||(44061764-44061864)
chr8 (262-372)||(34435653-34435763)
chr8 (271-372)||(33107783-33107884)
chr8 (264-372)||(1068653-1068761)
chr8 (264-372)||(33451481-33451587)
chr8 (269-372)||(5600903-5601006)
chr8 (269-372)||(5639614-5639717)
chr8 (270-372)||(26026949-26027051)
chr8 (269-372)||(15716892-15716995)
chr8 (303-371)||(9629649-9629717)
chr8 (269-372)||(25987703-25987806)
chr8 (269-372)||(44825494-44825597)
chr8 (269-367)||(45405905-45406003)
chr8 (279-364)||(12241134-12241219)
chr8 (262-351)||(22719484-22719573)
chr8 (262-351)||(32501134-32501223)
chr8 (264-351)||(43397827-43397914)
chr8 (264-372)||(28772042-28772148)
chr8 (264-372)||(2730877-2730985)
chr8 (269-372)||(12898845-12898949)
chr8 (264-351)||(10902751-10902838)
chr8 (264-351)||(27325804-27325891)
chr8 (269-351)||(10839420-10839502)
chr8 (269-351)||(31249462-31249544)
chr8 (269-351)||(37449363-37449445)
chr8 (269-326)||(16613686-16613742)
chr8 (268-369)||(37172111-37172212)
chr8 (264-324)||(35067207-35067267)
chr8 (289-371)||(29025331-29025414)
chr8 (264-323)||(36660416-36660475)
chr8 (262-371)||(6991725-6991834)
chr8 (270-351)||(27854706-27854785)
chr8 (264-326)||(30439469-30439530)
chr8 (264-322)||(34718162-34718219)
chr8 (264-345)||(25830189-25830270)
chr8 (262-314)||(33605054-33605104)
chr8 (262-326)||(5277667-5277730)
chr8 (262-322)||(9549166-9549225)
chr8 (269-329)||(10692490-10692550)
chr8 (270-314)||(34873889-34873933)
chr8 (296-344)||(39856116-39856164)
chr8 (264-316)||(43715921-43715973)
[»] scaffold0276 (1 HSPs)
scaffold0276 (262-370)||(1689-1797)
[»] chr5 (40 HSPs)
chr5 (270-372)||(17097718-17097820)
chr5 (264-371)||(11954478-11954585)
chr5 (264-372)||(611911-612019)
chr5 (296-364)||(12739851-12739919)
chr5 (296-364)||(12802674-12802742)
chr5 (264-372)||(21210865-21210973)
chr5 (269-351)||(5168234-5168316)
chr5 (296-372)||(31748415-31748491)
chr5 (264-372)||(42446207-42446315)
chr5 (297-372)||(39195824-39195899)
chr5 (272-372)||(32872814-32872914)
chr5 (272-351)||(13089719-13089798)
chr5 (296-371)||(19981903-19981978)
chr5 (269-371)||(29463047-29463149)
chr5 (264-372)||(26791160-26791269)
chr5 (264-372)||(33037566-33037675)
chr5 (269-372)||(28306048-28306152)
chr5 (262-372)||(7076484-7076595)
chr5 (264-351)||(35646429-35646516)
chr5 (276-343)||(39054645-39054712)
chr5 (272-372)||(7287105-7287206)
chr5 (290-351)||(27487959-27488020)
chr5 (289-370)||(36562971-36563052)
chr5 (264-317)||(38493671-38493724)
chr5 (269-324)||(4719702-4719757)
chr5 (269-372)||(16972016-16972119)
chr5 (272-323)||(19521969-19522020)
chr5 (264-323)||(36738994-36739053)
chr5 (262-371)||(8675350-8675459)
chr5 (289-351)||(14051253-14051315)
chr5 (262-324)||(18660803-18660865)
chr5 (269-370)||(35075496-35075595)
chr5 (264-372)||(1764270-1764379)
chr5 (264-317)||(20770178-20770230)
chr5 (264-345)||(22098302-22098383)
chr5 (272-345)||(33958203-33958276)
chr5 (264-317)||(39195764-39195817)
chr5 (264-324)||(40364615-40364675)
chr5 (264-316)||(41175679-41175730)
chr5 (270-326)||(43196588-43196643)
[»] scaffold0128 (1 HSPs)
scaffold0128 (264-358)||(10983-11075)
[»] scaffold0201 (1 HSPs)
scaffold0201 (264-372)||(8519-8627)
[»] scaffold0432 (1 HSPs)
scaffold0432 (269-357)||(6451-6539)
[»] scaffold0110 (1 HSPs)
scaffold0110 (264-371)||(28244-28351)
[»] scaffold0034 (1 HSPs)
scaffold0034 (297-372)||(101817-101891)
[»] scaffold0056 (1 HSPs)
scaffold0056 (264-372)||(76535-76644)
[»] scaffold0184 (1 HSPs)
scaffold0184 (331-372)||(13473-13514)
[»] scaffold0078 (1 HSPs)
scaffold0078 (331-372)||(59330-59371)
[»] scaffold0041 (1 HSPs)
scaffold0041 (262-351)||(10901-10990)
[»] scaffold0199 (1 HSPs)
scaffold0199 (272-371)||(8722-8822)


Alignment Details
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 25306911 - 25307156
Alignment:
Q  1 tgacttgttatctggaggccaacacatgaacctcttttctgtttcaggaaccttagaacgagtaacattgtttcttcctatataaatcaaagataaaaaa 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25306911 tgacttgttatatggaggccaacacatgaacctcttttctgtttcaggaaccttagaacgagtaacattgtttcttcctatataaatcaaagataaaaaa 25307010  T
Q  101 caaacataaagtagttgttacaaaccatttaaatttaaaaagtagtaaattagtttggatt---tgattattcatgtgaggataatattataatagatta 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||    
T  25307011 caaacataaagtagttgttacaaaccatttaaatttaaaaagtagtaaattagtttggatttactgattattcatgtgaggataatattataatagatta 25307110  T
Q  198 tcatcccttaaaaaggatcaaaccctttaataagatattcaatgta 243  Q
    || ||||||||||| |||||||||||||||||||||||||||||||    
T  25307111 tcgtcccttaaaaaagatcaaaccctttaataagatattcaatgta 25307156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 24 - 162
Target Start/End: Original strand, 25278845 - 25278990
Alignment:
Q  24 acatgaacctcttttctgtttcaggaaccttagaacgagtaacattgtttcttcctatataaatcaaaga-taaaaaacaaacataaagtagttgttaca 122  Q
    ||||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||| || |||||  |||||||||||  |||||||||||||||    
T  25278845 acatgaacctcttttatgtttcaagaaccttagaatgagcaacattgtttcttcctatatagatgaaagacaaaaaaacaaac--aaagtagttgttaca 25278942  T
Q  123 aaccatttaaattt--------aaaaagtagtaaattagtttggattt 162  Q
    |||||||||| |||        ||||||||||||||||| ||||||||    
T  25278943 aaccatttaatttttttttaaaaaaaagtagtaaattaggttggattt 25278990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 41443217 - 41443107
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||||| |||||||||||||||| || |||||| |||||||||||||| ||||||| |||||||| || |||| |||||||||||||||| |||||||||    
T  41443217 attttctctctcatactcacattattcttttactttctctctctattgttttgatttttgtgcaaatacctaaatttctttgtataatttagttgtccaa 41443118  T
Q  362 caagttgtcac 372  Q
     | ||||||||    
T  41443117 aaggttgtcac 41443107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 25279148 - 25279245
Alignment:
Q  165 ttattcatgtgaggataatattataatagattatcatcccttaaaaaggatcaaaccctttaataagatattcaatgtagatcctcaaatataggtta 262  Q
    |||||||||||||| | || ||||||| ||||||||||||||||||| |||||||| ||||||| ||||||| ||| |||||||||||||||||||||    
T  25279148 ttattcatgtgaggttgatgttataattgattatcatcccttaaaaaagatcaaactctttaatgagatatttaatttagatcctcaaatataggtta 25279245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 371
Target Start/End: Complemental strand, 4494261 - 4494154
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||| ||||||||||  | ||||||| |||||| ||||||||||||||| |||||  |||| |||| ||||||||||||||||||||||||||||    
T  4494261 tttctctcttatactcacatcatcattttactttctctttctattgctttgatttttgtgtcactacctaaatttctttgtataatttggttgtccaaca 4494162  T
Q  364 agttgtca 371  Q
    ||||||||    
T  4494161 agttgtca 4494154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 29525942 - 29526018
Alignment:
Q  296 ttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    |||||||||||||| ||||||| |||||| ||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  29525942 ttctctctctattgttttgatttttgtgccactatctaaatttttttgtaaaatttggttgtccaacaagttgtcac 29526018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 372
Target Start/End: Complemental strand, 34307557 - 34307457
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtca 371  Q
    |||||||||||||||| || ||| |||||| |||||||||||| || ||||   |||| |||| |||||||||||||||||||||||||| |||||||||    
T  34307557 tcatactcacattgttcttctactttctctttctattgctttggtttttgtatcactacctaaatttctttgtataatttggttgtccaataagttgtca 34307458  T
Q  372 c 372  Q
    |    
T  34307457 c 34307457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 278 - 364
Target Start/End: Complemental strand, 39714047 - 39713961
Alignment:
Q  278 tcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaa 364  Q
    |||||||||| || ||| |||||||||||||||||||||| |||||  |||||||||  || |||||||||||||||||||||||||    
T  39714047 tcacattgttcttatactttctctctctattgctttgatttttgtgttactatctaaaattttttgtataatttggttgtccaacaa 39713961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 9692772 - 9692880
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||| ||||||| | ||||||| |||||||||||||||||||||| |||||  |||  |||| |||||||||||||||| |||||| || |    
T  9692772 tttctctctcatattcacattatcattttactttctctctctattgctttgatttttgtgtcactgcctaactttctttgtataatttagttgtctaaaa 9692871  T
Q  364 agttgtcac 372  Q
     ||||||||    
T  9692872 ggttgtcac 9692880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 5244275 - 5244362
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| || |||||| ||||||||||||||||||| || |||||| |||| || |||| ||||||| |||||    
T  5244275 tttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattt 5244362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 20548017 - 20547906
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtcca 360  Q
    |||||| ||||||||||||| || |  |||||| |||||||||||||||||||||| |||||| |||| || |||| ||||||| || ||||||||||      
T  20548017 attttctctctcatactcacgttatctttttactttctctctctattgctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcac 20547918  T
Q  361 acaagttgtcac 372  Q
    | ||||||||||    
T  20547917 aaaagttgtcac 20547906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 27541529 - 27541418
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtcca 360  Q
    |||||| |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||| |||| || |||| ||||||| || ||||||||||      
T  27541529 attttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcac 27541430  T
Q  361 acaagttgtcac 372  Q
    | ||||||||||    
T  27541429 aaaagttgtcac 27541418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 358
Target Start/End: Original strand, 34456837 - 34456931
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtc 358  Q
    |||| |||||||||||| ||| |  |||||| |||||||||||||||||| ||| |||||| | || |||| |||||||||||||||| ||||||    
T  34456837 tttctctctcatactcatattatctttttactttctctctctattgctttaatttttgtgccaatacctaaatttctttgtataatttagttgtc 34456931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 32362985 - 32363086
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    ||||||||| ||||||||| |||||| |||||  ||||||||||||||  || ||| |||| |||| | |||||||||||| ||||||||||| || |||    
T  32362985 ctctcatacacacattgttcttttactttctc--tctattgctttgatatttatgccactacctaaatctctttgtataatgtggttgtccaataaattg 32363082  T
Q  369 tcac 372  Q
    ||||    
T  32363083 tcac 32363086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 288772 - 288859
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| || |||||| ||||||||||||||||||| || |||||  ||||||| ||||  |||||| |||||    
T  288772 tttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgtcactatctcatttcttttgtaaaattt 288859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 5114124 - 5114211
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||| ||||||||| |  |||||| |||||||||||||||||||||| |||||  |||| || |||||||||||| |||||    
T  5114124 tttctctctcacactcacattatctttttactttctctctctattgctttgatttttgtgtcactacctcattttctttgtaaaattt 5114211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 371
Target Start/End: Complemental strand, 27168706 - 27168599
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||| ||| || || ||| | ||||||||||| |||||||| |||||| ||||| ||| |  |||||||||||||||||||  || |    
T  27168706 tttctctctcatactcatattattcttctacttcctctctctattactttgatttttgtgccactatttaaatccctttgtataatttggttgtataaga 27168607  T
Q  364 agttgtca 371  Q
    ||||||||    
T  27168606 agttgtca 27168599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 372
Target Start/End: Original strand, 44856006 - 44856108
Alignment:
Q  271 ctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaacaagttgt 369  Q
    ||||||||||||||    |||||| ||||||||||||| |||||||| |||||| |||| || |||| ||||||| || ||||||||||  |||||||||    
T  44856006 ctcatactcacattacctttttactttctctctctatttctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcatacaagttgt 44856105  T
Q  370 cac 372  Q
    |||    
T  44856106 cac 44856108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 6178452 - 6178391
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    |||||| |||||||||||||||| |  |||||| |||||||||||||||||||||| |||||    
T  6178452 attttctctctcatactcacattatgtttttactttctctctctattgctttgatttttgtg 6178391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 371
Target Start/End: Complemental strand, 33472445 - 33472336
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||||| |||||||| ||| |||||| |||||| |||| | |||||| |||||||| ||||   ||||||||| | ||||||||||||||| ||||  ||    
T  33472445 attttctctctcatattcatattgttcttttactttctttttctattactttgatttttgtatcactatctaaatctctttgtataatttgattgtataa 33472346  T
Q  362 caagttgtca 371  Q
     |||||||||    
T  33472345 gaagttgtca 33472336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 31104743 - 31104819
Alignment:
Q  296 ttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    |||||||||||||| ||||||| |||||  |||| |||| |||||| ||||||||| |||||| ||||| |||||||    
T  31104743 ttctctctctattgttttgatttttgtgtcactacctaaatttcttcgtataatttagttgtcaaacaaattgtcac 31104819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 38926674 - 38926761
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||  |||| || |||| ||||||| |||||    
T  38926674 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactaccttatttcctttgtaaaattt 38926761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 41505537 - 41505624
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||  |||| || |||| ||||||| |||||    
T  41505537 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattt 41505624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 351
Target Start/End: Complemental strand, 52254163 - 52254076
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| ||||||||||| ||||||  |||||| ||||||||||||||||||| || |||||  |||| || |||| ||||||| |||||    
T  52254163 tttctctctcatactcgcattgtctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattt 52254076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 10811182 - 10811232
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttg 314  Q
    |||| ||||||||||||||||||  |||||| |||||||||||||||||||    
T  10811182 tttctctctcatactcacattgtgtttttaccttctctctctattgctttg 10811232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 370
Target Start/End: Complemental strand, 32145978 - 32145904
Alignment:
Q  296 ttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtc 370  Q
    |||||||||||||| ||||||| |||||  |||| |||| |||||||||| |||||  || ||||||||||||||    
T  32145978 ttctctctctattgttttgatttttgtgtcactacctaaatttctttgtaaaatttaattatccaacaagttgtc 32145904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 351
Target Start/End: Original strand, 41309188 - 41309250
Alignment:
Q  289 ttttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||| |||||||||||||||||||||| |||||  |||| || |||||||||||| |||||    
T  41309188 ttttactttctctctctattgctttgatttttgtgtcactacctcattttctttgtaaaattt 41309250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 351
Target Start/End: Original strand, 52939702 - 52939784
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||||||||||||  |  |||||| ||||||||||||||||||| || |||||| |||| || |||| ||||||| |||||    
T  52939702 ctctcatactcacatgatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattt 52939784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 26452747 - 26452694
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgatt 317  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||||||||||||    
T  26452747 tttctctctcatactcacattatatttttactttctctctctattgctttgatt 26452694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 370
Target Start/End: Complemental strand, 34064125 - 34064024
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    |||||||||||||||| || || ||| |||| |||||||| |||||||| || |   |||| |||| ||| | ||||||||||| ||||| |||||||||    
T  34064125 ctctcatactcacattatttttctactttctttctctattactttgatttttatatcactacctaagtttatctgtataatttgtttgtctaacaagttg 34064026  T
Q  369 tc 370  Q
    ||    
T  34064025 tc 34064024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 35597208 - 35597317
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| |||||||||||||||| || |||||| |||||||||||||| |||| || |||||  |||| ||  ||| ||||||| || ||||||||||  |     
T  35597208 tttctctctcatactcacattatttttttactttctctctctattgttttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaa 35597307  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  35597308 aagttgtcac 35597317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 45711466 - 45711405
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    |||||| |||||||||||||||| |  |||||| |||||||||||||| |||| ||||||||    
T  45711466 attttctctctcatactcacattatctttttactttctctctctattgttttggttattgtg 45711405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 50314669 - 50314730
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    |||||| |||||||||||||||| |  |||||| ||||||||||||| |||||||| |||||    
T  50314669 attttctctctcatactcacattatgtttttactttctctctctattactttgatttttgtg 50314730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 371
Target Start/End: Complemental strand, 35377106 - 35376998
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| |||||| ||||||||| |  |||||| |||| ||||||||||||||||| |||||| | ||  | |||||||||||| || ||||||||||  |     
T  35377106 tttctctctcacactcacattatgtttttactttctttctctattgctttgatttttgtgccaatacatcattttctttgtaaaattttggttgtcacaa 35377007  T
Q  363 aagttgtca 371  Q
    |||||||||    
T  35377006 aagttgtca 35376998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 52714780 - 52714840
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||| |||||||||| ||||| |  |||||| |||||||||||||||||||||| ||||||    
T  52714780 tttctctctcatacttacattatatttttactttctctctctattgctttgatttttgtgc 52714840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 337
Target Start/End: Complemental strand, 7668214 - 7668139
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattt 337  Q
    |||||| |||| ||||||||||| |  |||||| ||||||||||||||||||| || || ||| ||||||| ||||    
T  7668214 attttctctcttatactcacattatctttttactttctctctctattgctttggtttttatgccactatcttattt 7668139  T

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Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 351
Target Start/End: Complemental strand, 16969591 - 16969504
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| |  |||||| |||||| ||||||| ||||||| || ||| |||| || |||| ||||||| |||||    
T  16969591 tttctctctcatactcacattatctttttactttctctttctattgttttgatttttatgccactacctcatttcctttgtaaaattt 16969504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 19149036 - 19149123
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| |  |||||| |||||||| ||||| |||| || |||||| |||| || |||| ||||||| |||||    
T  19149036 tttctctctcatactcacattatctttttactttctctctttattgttttggtttttgtgccactaactcatttcctttgtaaaattt 19149123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 28700512 - 28700567
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||||||||||||||| |  |||||| ||||||||||||||||||| || ||||||    
T  28700512 ctctcatactcacattatgtttttactttctctctctattgctttggtttttgtgc 28700567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 42358663 - 42358604
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    |||| |||||||||||||||| |  |||||| || ||||||||||||||||||| |||||    
T  42358663 tttctctctcatactcacattatctttttactttatctctctattgctttgatttttgtg 42358604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 55361258 - 55361199
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    |||| |||| ||||||||||| || |||||| ||||||||||||||||||| || |||||    
T  55361258 tttctctcttatactcacattatttttttactttctctctctattgctttggtttttgtg 55361199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 351
Target Start/End: Complemental strand, 36671034 - 36670952
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||||||||||||| |  |||||| || |||||||||||||||| || |||||| |||| || ||||  |||||| |||||    
T  36671034 ctctcatactcacattatctttttactttttctctctattgctttggtttttgtgccactacctcatttcatttgtaaaattt 36670952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 44813180 - 44813269
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctc--tctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| || ||| || |||||  |||||||||||| | || |||||| |||| ||||||| ||||||| |||||    
T  44813180 tttctctctcatactcacattattttttaactttctctctctctattgcttgggtttttgtgccactacctaatttcctttgtaaaattt 44813269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 48353043 - 48353101
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgt 322  Q
    |||| |||||||||||| ||| |  |||||| |||||||||||||||||||||| ||||    
T  48353043 tttctctctcatactcatattatatttttactttctctctctattgctttgatttttgt 48353101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 49761354 - 49761415
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||| |||||||||||||||| || |||||| || |||||||||||||||| || ||||||||    
T  49761354 tttctctctcatactcacattatt-ttttactttatctctctattgctttggtttttgtgcaa 49761415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 536295 - 536250
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttg 314  Q
    |||||| ||||||||| || |||||| |||||||||||||||||||    
T  536295 ctctcacactcacattatttttttactttctctctctattgctttg 536250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 26014858 - 26014967
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| |||||||||||||||| |  |||||| |||||||||||||| |||| || ||||||   || || |||| ||||||| || ||||||||||  |     
T  26014858 tttctctctcatactcacattatctttttactttctctctctattgttttggtttttgtgcccttacctcatttcctttgtaaaattttggttgtcacaa 26014957  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  26014958 aagttgtcac 26014967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 26550284 - 26550344
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||| |||||||| ||||||| | ||||||| ||||||||||||| |||| ||| ||||||    
T  26550284 tttctctctcatattcacattataattttactttctctctctattactttaatttttgtgc 26550344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 36756070 - 36755994
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    ||||||||||| |||| |  |||||  |||||||||||||||||||||| |||||| |  || || |||||||||||    
T  36756070 ctctcatactcgcattatatttttattttctctctctattgctttgatttttgtgccaacatatacttttctttgta 36755994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 39629858 - 39629810
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgatt 317  Q
    |||||||||||||||| |  |||||| |||||||||||||| |||||||    
T  39629858 ctctcatactcacattatgtttttactttctctctctattgttttgatt 39629810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 371
Target Start/End: Complemental strand, 39697246 - 39697139
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatcta-attttctttgtataatttggttgtccaac 362  Q
    |||| ||||||||||||||||  | |||||| || |||||||||||||||| || | |||||| |||| |  ||||||||||| | | ||||||||| |     
T  39697246 tttctctctcatactcacattact-ttttactttatctctctattgctttggttttcgtgcaaatatcaattttttctttgtaaattatggttgtcccaa 39697148  T
Q  363 aagttgtca 371  Q
    |||||||||    
T  39697147 aagttgtca 39697139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 351
Target Start/End: Complemental strand, 44413945 - 44413860
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| |  |||||| ||||||||  ||||||||| || |||||  | ||||| |||||||||||| |||||    
T  44413945 tttctctctcatactcacattatctttttaccttctctct--attgctttggtttttgtgtcaatatctcattttctttgtaaaattt 44413860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 53871059 - 53871007
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttg 314  Q
    |||||| |||||||| ||||||| |  |||||| |||||||||||||||||||    
T  53871059 attttctctctcatattcacattttgtttttaccttctctctctattgctttg 53871007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 51255793 - 51255901
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||  ||||| ||| |||||||||||||||||||||| |||||| ||||||||| |||||||||| |||||||||||||||||    
T  51255793 tttctctctcatactcacatgattattctactttctctctctattgctttgatttttgtgccactatctaaatttctttgtaaaatttggttgtccaaca 51255892  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  51255893 agttgtcac 51255901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 38519840 - 38519948
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||  ||||| ||| |||||||||||||||||||||| |||||| ||||| ||| |||||||||| |||||||||||||||||    
T  38519840 tttctctctcatactcacatgattattctactttctctctctattgctttgatttttgtgccactatttaaatttctttgtaaaatttggttgtccaaca 38519939  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  38519940 agttgtcac 38519948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 5386419 - 5386527
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||| || |||||| |||||||||||||||||||||| |||||  ||||||||| |||||||||||||||| |||||| || |    
T  5386419 tttctctctcatactcacattattcttttactttctctctctattgctttgatttttgtgttactatctaaatttctttgtataatttagttgtctaaaa 5386518  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  5386519 agttgtcac 5386527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 26600225 - 26600115
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||||| ||||||||| ||||||||| || ||| |||| ||||||||||||| |||||||||| ||||||||||| | |||||||||| |||||||||||    
T  26600225 attttctctctcatacacacattgttcttctactttctttctctattgcttttattattgtgccactatctaattctttttgtataatgtggttgtccaa 26600126  T
Q  362 caagttgtcac 372  Q
    ||| |||||||    
T  26600125 caaattgtcac 26600115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 371
Target Start/End: Original strand, 18315984 - 18316091
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||| ||||||||||  | ||||||| |||||| ||||||||||||||| |||||  |||| |||| ||||||||||||||||||||||||||||    
T  18315984 tttctctcttatactcacatcatcattttactttctctttctattgctttgatttttgtgtcactacctaaatttctttgtataatttggttgtccaaca 18316083  T
Q  364 agttgtca 371  Q
    ||||||||    
T  18316084 agttgtca 18316091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 262 - 367
Target Start/End: Original strand, 52204895 - 52205000
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||||| || |||||||||||||||| || ||| |||||||||||||||||||||| |||||  ||||  ||| ||||||| ||||||||||||||||||    
T  52204895 attttctctttcatactcacattgtttttctactttctctctctattgctttgatttttgtgtcactacttaaatttctttttataatttggttgtccaa 52204994  T
Q  362 caagtt 367  Q
    ||||||    
T  52204995 caagtt 52205000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 29227267 - 29227159
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||| ||||||||| || ||| |||||||||||||||||||||  |||||  |||| |||| |||||||||||||| |||||||||||||    
T  29227267 tttctctctcatacacacattgttcttctactttctctctctattgctttgatatttgtgtcactacctaaatttctttgtataatatggttgtccaaca 29227168  T
Q  364 agttgtcac 372  Q
    | |||||||    
T  29227167 aattgtcac 29227159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 51577661 - 51577769
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||| ||| | ||||||| |||||||||||||||||||||| |||||| |||| |||| ||||||| |||||||| ||||||||| |    
T  51577661 tttctctctcatactcatattatcattttactttctctctctattgctttgatttttgtgccactacctaaatttctttatataatttagttgtccaaaa 51577760  T
Q  364 agttgtcac 372  Q
     ||||||||    
T  51577761 ggttgtcac 51577769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 39158152 - 39158260
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||| || || ||| |||||| ||||||| |||| || ||||||  ||| |||| |||||||||||||||||||||||||| |    
T  39158152 tttctctctcatactcacattattcttctactttctctttctattgttttggtttttgtgccgctacctaaatttctttgtataatttggttgtccaata 39158251  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  39158252 agttgtcac 39158260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 54000745 - 54000853
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||| | ||||||| |||||||||||||||||  |||  ||||| |||| |||| |||||||||||||||| ||||||||| |    
T  54000745 tttctctctcatactcacattatcattttactttctctctctattgcttaaatttgtgtgccactacctaaatttctttgtataatttagttgtccaaaa 54000844  T
Q  364 agttgtcac 372  Q
     ||||||||    
T  54000845 ggttgtcac 54000853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 41262371 - 41262261
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||||| ||||| ||||||||||||  || ||| |||| ||||||||||||||||| |||||| | ||||||| ||||||||||| ||||||||||| ||    
T  41262371 attttctctctcttactcacattgtccttctactttctttctctattgctttgatttttgtgccattatctaaatttctttgtattatttggttgtctaa 41262272  T
Q  362 caagttgtcac 372  Q
     | ||||||||    
T  41262271 taggttgtcac 41262261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 269 - 372
Target Start/End: Complemental strand, 22813741 - 22813638
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    ||||| |||||| ||||| ||||||| || ||| ||||||||||||||| |||||  |||| |||| ||||||| ||||||||  |||||||||||||||    
T  22813741 ctctcgtactcatattgtcattttactttttctttctattgctttgatttttgtgtcactacctaaatttctttatataatttaattgtccaacaagttg 22813642  T
Q  369 tcac 372  Q
    ||||    
T  22813641 tcac 22813638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 269 - 372
Target Start/End: Complemental strand, 36130372 - 36130269
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    ||||||||| ||||||||| || ||| || |||||||||||| |||||| |||||  | || |||| |||||||||||||| || |||||||||||||||    
T  36130372 ctctcatacacacattgttcttctactttttctctctattgccttgatttttgtgtcattacctaaatttctttgtataatgtgattgtccaacaagttg 36130273  T
Q  369 tcac 372  Q
    ||||    
T  36130272 tcac 36130269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 372
Target Start/End: Original strand, 14443243 - 14443353
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||||| |||||||||| | ||| ||||||||| |||||||||||||||||| ||| ||  || |||| |||| || ||||||||||||| |||||||||    
T  14443243 attttctctctcatacttatattattattttactttctctctctattgctttaatttttacgccactacctaaattcctttgtataatttagttgtccaa 14443342  T
Q  362 caagttgtcac 372  Q
     | ||||||||    
T  14443343 aaggttgtcac 14443353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 40348838 - 40348918
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttcttt 342  Q
    |||||| |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||  ||||||| |||||||||    
T  40348838 attttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactatctcattttcttt 40348918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 10147080 - 10147005
Alignment:
Q  297 tctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    ||||||||| ||||||| ||| |||||  |||| |||| ||||||||||||||||| |||||||||||||| ||||    
T  10147080 tctctctcttttgcttttatttttgtgtcactacctaaatttctttgtataatttgattgtccaacaagttatcac 10147005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 351
Target Start/End: Complemental strand, 10250540 - 10250453
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||| ||||  | |||||||||||| |||||    
T  10250540 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactacttcattttctttgtaaaattt 10250453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 269 - 351
Target Start/End: Original strand, 37997305 - 37997387
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||||||||||||| |  |||||| |||||||||||||||||||||| |||||  | || || |||||||||||| |||||    
T  37997305 ctctcatactcacattatctttttactttctctctctattgctttgatttttgtgtcaatacctcattttctttgtaaaattt 37997387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 372
Target Start/End: Original strand, 50506470 - 50506543
Alignment:
Q  298 ctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    ||||| |||||||||||||| |||||| |||| |||| |||||||||||||||| ||||||||| | ||||||||    
T  50506470 ctctccctattgctttgatt-ttgtgccactacctaaatttctttgtataatttagttgtccaaaaggttgtcac 50506543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 351
Target Start/End: Complemental strand, 1816694 - 1816613
Alignment:
Q  270 tctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    ||||||||||| ||| | ||||||| || ||||||||||||||||||| |||||  |||| |||||||| ||| ||||||||    
T  1816694 tctcatactcatattatcattttactttatctctctattgctttgatttttgtgtcactacctaattttttttatataattt 1816613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 39440528 - 39440589
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    |||||| || ||||||||||||| | ||||||| |||||||||||||||||||||| |||||    
T  39440528 attttctctttcatactcacattttcattttactttctctctctattgctttgatttttgtg 39440589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 364
Target Start/End: Complemental strand, 149509 - 149409
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||| |  ||  || ||||||||||||||||||  || |||||  |||| |||| |||||||||||| ||| |||||||||||    
T  149509 tttctctctcatactcacattatgtttcaactttctctctctattgctttagtttttgtgtcactacctaaatttctttgtatattttagttgtccaaca 149410  T
Q  364 a 364  Q
    |    
T  149409 a 149409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 2738292 - 2738184
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||| ||||||| |  || ||| ||||||||||||| |||||||| |||||| || | ||||  |||||||||||||||  |||||||| |    
T  2738292 tttctctctcatattcacattatctttctactttctctctctatttctttgattgttgtgccacaacctaaaattctttgtataatttaattgtccaaaa 2738193  T
Q  364 agttgtcac 372  Q
     ||||||||    
T  2738192 ggttgtcac 2738184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 26732276 - 26732380
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaacaagtt 367  Q
    |||||||||||||||| |  |||||  |||||||||||||| |||| || |||||| |||| || |||||||||||| || ||||||||||  | |||||    
T  26732276 ctctcatactcacattatctttttattttctctctctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagtt 26732375  T
Q  368 gtcac 372  Q
    |||||    
T  26732376 gtcac 26732380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 351
Target Start/End: Original strand, 5622512 - 5622591
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    ||||||||||||| |  |||||| || |||||||||||||||| || ||||||||||| || |||| ||||||| |||||    
T  5622512 tcatactcacattatctttttactttttctctctattgctttggtttttgtgcaactacctcatttcctttgtaaaattt 5622591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 19232153 - 19232098
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||||||||||||||| |  |||||| |||||||||||||||||||||| ||||||    
T  19232153 ctctcatactcacattatatttttactttctctctctattgctttgatttttgtgc 19232098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 43175030 - 43175117
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| || |||||| |||||||||||| |||||| || |||||  |||| || |||| ||||||| |||||    
T  43175030 tttctctctcatactcacattatttttttactttctctctctatggctttggtttttgtgtcactacctcatttcctttgtaaaattt 43175117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 324
Target Start/End: Complemental strand, 7632488 - 7632426
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||||| || ||||||||||||| |  |||||| |||||||||||||||||||||| ||||||    
T  7632488 attttctctttcatactcacattatatttttactttctctctctattgctttgatttttgtgc 7632426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 38376490 - 38376428
Alignment:
Q  289 ttttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||| || |||||||||| |||||||| |||||| ||||||| |||||||||||| |||||    
T  38376490 ttttactttttctctctattactttgatttttgtgccactatctcattttctttgtaaaattt 38376428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 361
Target Start/End: Complemental strand, 5932788 - 5932691
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||| |||||||||||||||| |  |||||   ||||| ||||||| ||||||| |||||  |||| |||| ||||||||||||||||  ||||||||    
T  5932788 tttctctctcatactcacattatccttttagtgtctctatctattgttttgatttttgtgtcactacctaaatttctttgtataatttaattgtccaa 5932691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 24575876 - 24575767
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| |||||||||| |||||||  |||||| ||||||||||||||||||| || |||||| | || || |||| |||| || || ||||||||||  |     
T  24575876 tttctctctcatacttacattgtctttttactttctctctctattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaa 24575777  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  24575776 aagttgtcac 24575767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 27051111 - 27051002
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| |||||||||||||||| |  |||||| |||||||| ||||| |||| || |||||  | ||||| |||||||||||| || ||||||||||  |     
T  27051111 tttctctctcatactcacattatctttttaccttctctctttattgttttggtttttgtgtcaatatctcattttctttgtaaaattttggttgtcacaa 27051012  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  27051011 aagttgtcac 27051002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 37297093 - 37297154
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    |||||| |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||    
T  37297093 attttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtg 37297154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 51986088 - 51986197
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| |||||||||||||||| |  |||||| |||||| |||||| ||||| || |||||| |||| || |||| ||||||| || ||||||||||  |     
T  51986088 tttctctctcatactcacattatctttttactttctctatctatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaa 51986187  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  51986188 aagttgtcac 51986197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 336832 - 336772
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||| |||||||| |||||||||  |||| | |||||||||||||||||||||| ||||||    
T  336832 tttctctctcatattcacattgtatttttgctttctctctctattgctttgatttttgtgc 336772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 372
Target Start/End: Complemental strand, 19651927 - 19651835
Alignment:
Q  280 acattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    ||||| || |||||| || | |||||||| |||||||| || ||  |||| |||| |||||||||||||||| ||||||||| | ||||||||    
T  19651927 acattatttttttactttatttctctattactttgatttttatgtcactacctaaatttctttgtataatttagttgtccaaaaggttgtcac 19651835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 21025653 - 21025729
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    ||||| |||||||||| || |||||| ||||||||||||||||||| ||   ||  ||||||||| |||||||||||    
T  21025653 ctctcttactcacattatttttttactttctctctctattgctttggtttccgtataactatctacttttctttgta 21025729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 31574966 - 31574906
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgt 322  Q
    |||||| |||||||||||||||| |  |||||  |||||||||||||||||||||| ||||    
T  31574966 attttctctctcatactcacattatatttttattttctctctctattgctttgatttttgt 31574906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 371
Target Start/End: Complemental strand, 50831780 - 50831672
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatt-tggttgtccaac 362  Q
    ||||||||||||||||||||  |   ||||| |||||||||||||||||||||| |||||  |  | ||  ||||||||||| |||| ||||||||| |     
T  50831780 tttccctctcatactcacatcatgtctttactttctctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtcccaa 50831681  T
Q  363 aagttgtca 371  Q
    |||||||||    
T  50831680 aagttgtca 50831672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 50890098 - 50890038
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||| |||||||||||||||| |  |||| | |||||||||||||||||||||| ||||||    
T  50890098 tttctctctcatactcacattatatttttgctttctctctctattgctttgatttttgtgc 50890038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 16019531 - 16019582
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    ||||||||||||| |  |||||| |||||||||||||||||||||| |||||    
T  16019531 tcatactcacattatatttttactttctctctctattgctttgatttttgtg 16019582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 351
Target Start/End: Complemental strand, 50608641 - 50608562
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    ||||||||||||| || |||||| | ||||||||||| |||||||| |||||  | ||||| |||| ||||||| |||||    
T  50608641 tcatactcacattatttttttacttcctctctctattactttgatttttgtgtcaatatctcatttcctttgtaaaattt 50608562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 11068739 - 11068793
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    |||||||| ||||||| |  |||||| |||||||||||||||||||||| |||||    
T  11068739 ctctcatattcacattatctttttactttctctctctattgctttgatttttgtg 11068793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 338
Target Start/End: Original strand, 26910248 - 26910322
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaatttt 338  Q
    |||| ||||| || ||| ||| || |||||| |||||||||||||||||||||| |||||| |||| || |||||    
T  26910248 tttctctctcgtattcatattatttttttactttctctctctattgctttgatttttgtgccactacctcatttt 26910322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 36123484 - 36123422
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||| |||||||||| ||||| |  |||||| ||||||||||||| |||||||| ||||||||    
T  36123484 tttctctctcatacttacattatatttttactttctctctctattactttgatttttgtgcaa 36123422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 38338946 - 38338885
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||| ||||||||||||||||  | |||||| || ||||||||||||||||||| ||||||||    
T  38338946 tttctctctcatactcacattact-ttttactttatctctctattgctttgatttttgtgcaa 38338885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 351
Target Start/End: Original strand, 46213021 - 46213103
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    ||||| |||||||||| |  |||||| || ||||||| |||||||| || ||||||||||| || |||| ||||||| |||||    
T  46213021 ctctcgtactcacattatctttttactttttctctctgttgctttggtttttgtgcaactacctcatttcctttgtaaaattt 46213103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 351
Target Start/End: Original strand, 46634151 - 46634233
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||||||||||||| |  |||||| |||||| |||||| |||||||| |||||  |||| || |||| ||||||| |||||    
T  46634151 ctctcatactcacattatctttttactttctctttctattactttgatttttgtgtcactacctcatttcctttgtaaaattt 46634233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 23369357 - 23369276
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    |||| ||||| |||||||||| |  |||||| || |||||||||||||||| || |||||| |||| || |||| |||||||    
T  23369357 tttctctctcttactcacattatctttttactttatctctctattgctttggtttttgtgccactacctcatttcctttgta 23369276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 28458401 - 28458349
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgatt 317  Q
    |||| |||||||||||||||| || |||||| || |||||||||||||||||||    
T  28458401 tttctctctcatactcacattatt-ttttactttatctctctattgctttgatt 28458349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 351
Target Start/End: Original strand, 36177950 - 36178039
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||| |||||||||||||||| |  |||||| |||| |||||||||||||| || |||| | |||| || |||| |||| || |||||    
T  36177950 attttctctctcatactcacattatctttttactttctttctctattgctttggtttttgtaccactacctcatttcctttataaaattt 36178039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 42396030 - 42395981
Alignment:
Q  296 ttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    |||||||||||||||||||||| |||||||| || || ||||| ||||||    
T  42396030 ttctctctctattgctttgatttttgtgcaaatacctcattttttttgta 42395981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 24509407 - 24509331
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    |||||||||||||||| || |||||| |||||||||||||  |||| ||   |||  |||||||| |||||||||||    
T  24509407 ctctcatactcacattatttttttactttctctctctattattttggtttccgtgtcactatctatttttctttgta 24509331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 31559583 - 31559635
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttg 314  Q
    |||||| |||||||||||||||| |  |||||| |||||||||||||| ||||    
T  31559583 attttctctctcatactcacattatatttttactttctctctctattgttttg 31559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 359
Target Start/End: Original strand, 32696228 - 32696323
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatcta-attttctttgtataatttggttgtcc 359  Q
    |||| |||||||| |||||||||| |||||| || ||||| ||||||||||||| | |||| | ||||||  ||||||||||| | | |||||||||    
T  32696228 tttctctctcatattcacattgtt-ttttactttatctctttattgctttgattttcgtgccaatatctactttttctttgtaaattatggttgtcc 32696323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 38381103 - 38381043
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgt 322  Q
    |||||| |||||||||| ||||| |  |||||  |||||||||||||||||||||| ||||    
T  38381103 attttctctctcatacttacattatgtttttattttctctctctattgctttgatttttgt 38381043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 369
Target Start/End: Complemental strand, 48494932 - 48494832
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaa--ttttctttgtataatttggttgtccaacaagt 366  Q
    ||||||||| ||||||||| || ||| |||||||| | ||  ||||||| || | | |||||||||  ||||||||||||||  ||||| ||||||||||    
T  48494932 ctctcatacacacattgttcttctacattctctctatttt--tttgatttttataccactatctaaatttttctttgtataaagtggttatccaacaagt 48494835  T
Q  367 tgt 369  Q
    |||    
T  48494834 tgt 48494832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 49585041 - 49585093
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgat 316  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||| |||||||    
T  49585041 tttctctctcatactcacattatatttttactttctctctctattactttgat 49585093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 7e-31; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 12007210 - 12007102
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||  | ||| ||| |||||||||||||||||||||| |||||| ||||||||| |||||||||| |||||||||||||||||    
T  12007210 tttctctctcatactcacatgatcattctactttctctctctattgctttgatttttgtgccactatctaaatttctttgtaaaatttggttgtccaaca 12007111  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  12007110 agttgtcac 12007102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 34978343 - 34978451
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||| |||| |||| |||||||||||||||| ||||||||| |    
T  34978343 tttctctctcatactcacattatccttttactttctctctctattgctttgttttttgtgccactacctaaatttctttgtataatttagttgtccaaaa 34978442  T
Q  364 agttgtcac 372  Q
     ||||||||    
T  34978443 ggttgtcac 34978451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 29723916 - 29723841
Alignment:
Q  297 tctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    ||||||||||||||||||||| |||| | ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  29723916 tctctctctattgctttgatttttgtaccactatctaaatttctttgtaaaatttggttgtccaacaagttgtcac 29723841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 367
Target Start/End: Complemental strand, 32777731 - 32777628
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||| |||  || ||| ||||||||| ||| |||||||| |||||| |||| |||| ||||||||||||||||||||||||||||    
T  32777731 tttctctctcatactcacactgtccttctactttctctctccattactttgatttttgtgccactacctaaatttctttgtataatttggttgtccaaca 32777632  T
Q  364 agtt 367  Q
    ||||    
T  32777631 agtt 32777628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 371
Target Start/End: Complemental strand, 45420085 - 45419978
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||| ||||||| | ||||||| |||||||||||||| ||||||| |||||| |||| |||| |||||||||||||||| ||||||||| |    
T  45420085 tttctctctcatattcacattatcattttactttctctctctattgttttgatttttgtgccactacctaaatttctttgtataatttagttgtccaaaa 45419986  T
Q  364 agttgtca 371  Q
     |||||||    
T  45419985 ggttgtca 45419978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 371
Target Start/End: Original strand, 13152639 - 13152747
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgcttt-gattattgtgcaactatctaattttctttgtataatttggttgtccaac 362  Q
    |||| |||||||||||||||| |  |||||| |||||||||||||||||| |||| |||||| |||| |||| |||||||||||||||| |||||||||     
T  13152639 tttctctctcatactcacattatccttttactttctctctctattgcttttgatttttgtgccactacctaaatttctttgtataatttagttgtccaaa 13152738  T
Q  363 aagttgtca 371  Q
    | |||||||    
T  13152739 aggttgtca 13152747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 27570390 - 27570498
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||  | ||| ||| || | ||||||||||||||||| |||||| |||||| || |||||||||| ||||||||||||||| |    
T  27570390 tttctctctcatactcacatgatcattctactttttttctctattgctttgatttttgtgccactatcaaaatttctttgtaaaatttggttgtccaata 27570489  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  27570490 agttgtcac 27570498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 2008823 - 2008748
Alignment:
Q  297 tctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    ||||||||||||||||||||  |||||| |||| |||| |||||||||||||| ||||||||||||||||||||||    
T  2008823 tctctctctattgctttgatatttgtgccactacctaaatttctttgtataatgtggttgtccaacaagttgtcac 2008748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 269 - 372
Target Start/End: Complemental strand, 28249589 - 28249486
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    |||||||| ||||||| ||||||||  || ||||||| ||||||||||| |||||  ||||  ||| |||||||||||||||| ||||||||| ||||||    
T  28249589 ctctcatattcacattattattttattttatctctcttttgctttgatttttgtgtcactacttaaatttctttgtataatttagttgtccaaaaagttg 28249490  T
Q  369 tcac 372  Q
    ||||    
T  28249489 tcac 28249486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 15325646 - 15325556
Alignment:
Q  282 attgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    |||||| || ||| |||||||||||||| ||| ||| |||||  ||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  15325646 attgttcttctactttctctctctattgtttttatttttgtgtcactatctaaatttttttgtataatgtggttgtccaacaagttgtcac 15325556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 372
Target Start/End: Original strand, 21103069 - 21103167
Alignment:
Q  274 atactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    ||||| ||||| || |||||| || ||||| ||||||||||||| || ||| ||||||||| ||||||||||||| || ||||||||||||||| ||||    
T  21103069 atacttacattatttttttactttatctctttattgctttgatttttatgccactatctaaatttctttgtataagttagttgtccaacaagttatcac 21103167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 371
Target Start/End: Complemental strand, 43807832 - 43807730
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    ||||||||||||||||||| |||||| |||||| ||||||  ||||||| |||||  ||||  ||| | |||||||||||||||||||| |||||| |||    
T  43807832 ctctcatactcacattgttcttttactttctctttctattaatttgatttttgtgtcactacttaaatgtctttgtataatttggttgtacaacaaattg 43807733  T
Q  369 tca 371  Q
    |||    
T  43807732 tca 43807730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 372
Target Start/End: Original strand, 33845097 - 33845197
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtca 371  Q
    |||||| ||||||||| || ||| || | ||||| ||||||||||| |||||  |||| |||| |||||||||||||| |||||||||||||| ||||||    
T  33845097 tcatacacacattgttcttctactttttttctctgttgctttgatttttgtgtcactacctaaatttctttgtataatgtggttgtccaacaaattgtca 33845196  T
Q  372 c 372  Q
    |    
T  33845197 c 33845197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 43081914 - 43081806
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||| |||| ||||||||| || ||| |||||||||||||||||| ||  |||||  |||| |||| |||||||||||||| |||||||| ||||    
T  43081914 tttctctcttatacacacattgttcttctactttctctctctattgctttaatatttgtgtcactacctaaatttctttgtataatgtggttgtctaaca 43081815  T
Q  364 agttgtcac 372  Q
    | |||||||    
T  43081814 aattgtcac 43081806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 269 - 368
Target Start/End: Original strand, 37352162 - 37352261
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    |||||||| ||||||||   || ||| ||||||||||| || ||||||| |||||  |||| |||| ||| |||||||||||||||||||||||||||||    
T  37352162 ctctcatattcacattgcccttctactttctctctctactgttttgatttttgtgtcactacctaaatttatttgtataatttggttgtccaacaagttg 37352261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 347
Target Start/End: Original strand, 47448873 - 47448956
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtata 347  Q
    |||| ||||||||||||||||||  |||||| |||| |||||||||||||| || |||||| |||| |||| ||||||||||||    
T  47448873 tttctctctcatactcacattgtgtttttactttctttctctattgctttggtttttgtgccactacctaaatttctttgtata 47448956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 4292479 - 4292555
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    |||||||||||||||| |  |||||| |||||||||||||||||||||| |||| | | ||| ||||||||||||||    
T  4292479 ctctcatactcacattatgtttttactttctctctctattgctttgatttttgtaccaatatttaattttctttgta 4292555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 372
Target Start/End: Complemental strand, 38956638 - 38956534
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaacaagtt 367  Q
    |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||| |||| || |||| ||||||| || ||||||||||  | |||||    
T  38956638 ctctcatactcacattatctttttactttctctctctattgctttgttttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagtt 38956539  T
Q  368 gtcac 372  Q
    |||||    
T  38956538 gtcac 38956534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 357
Target Start/End: Original strand, 46880947 - 46881042
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgt 357  Q
    |||||| |||||||||||| |||||| || |||  |||||||||||| |||||||| ||  || ||||||||| | || |||||||||||||||||    
T  46880947 attttctctctcatactcatattgttcttctactatctctctctattactttgattttttcgccactatctaaatgtcgttgtataatttggttgt 46881042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 324
Target Start/End: Complemental strand, 40854681 - 40854619
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||||| |||||||||||||||| |  |||||| |||||||||||||||||||||| ||||||    
T  40854681 attttctctctcatactcacattatatttttactttctctctctattgctttgatttttgtgc 40854619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 26749051 - 26749148
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||| ||||||||||||| || || || ||| |||| ||||||||||||||||| |||||| |  | |||| | |||||||||||||| |||||||||    
T  26749051 tttctctctcatactcactttatttttatactttctttctctattgctttgattgttgtgccataacctaaatctctttgtataatttagttgtccaa 26749148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 3148805 - 3148881
Alignment:
Q  296 ttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    ||||||||||||| |||||||  |||||  ||||||||| ||| ||| |||||| ||||||| ||||||||||||||    
T  3148805 ttctctctctattactttgatatttgtgtcactatctaaatttatttatataatgtggttgttcaacaagttgtcac 3148881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 33057458 - 33057534
Alignment:
Q  296 ttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    |||||||||||||||||||||| |||||  | || |||| ||||||||||| ||||||||||| || | ||||||||    
T  33057458 ttctctctctattgctttgatttttgtgttattacctaaatttctttgtattatttggttgtctaataggttgtcac 33057534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 351
Target Start/End: Original strand, 43025391 - 43025473
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||||||||| ||| |  |||||| || |||||||||||||||| || |||||| ||||||| |||| ||||||| |||||    
T  43025391 ctctcatactcatattatctttttactttttctctctattgctttggtttttgtgccactatctcatttcctttgtaaaattt 43025473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 359
Target Start/End: Complemental strand, 49129000 - 49128910
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtcc 359  Q
    ||||||||||||||||||  |||||| |||||||| || |||||||||| |||||  | |  |||  |||||||||||| |||||||||||    
T  49129000 ctctcatactcacattgtgtttttactttctctctttactgctttgatttttgtgttaatgcctatatttctttgtatattttggttgtcc 49128910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 17945119 - 17945164
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttg 314  Q
    |||||||||||||||| || |||||| |||||||||||||||||||    
T  17945119 ctctcatactcacattattcttttactttctctctctattgctttg 17945164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 36703891 - 36703847
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgcttt 313  Q
    |||||||||||||||| || |||||| ||||||||||||||||||    
T  36703891 ctctcatactcacattatttttttactttctctctctattgcttt 36703847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 31445372 - 31445423
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    ||||||||||||| |  |||||| |||||||||||||||||||||| |||||    
T  31445372 tcatactcacattatatttttactttctctctctattgctttgatttttgtg 31445423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 46578155 - 46578100
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||||||| ||||||| | ||||||| |||||||||||||| ||||||| ||||||    
T  46578155 ctctcatattcacattatcattttactttctctctctattgatttgatttttgtgc 46578100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 11564940 - 11565001
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||| |||||||||||||||| || |||||| || ||||||||||||||||||| | ||||||    
T  11564940 tttctctctcatactcacattatt-ttttactttatctctctattgctttgattttcgtgcaa 11565001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 22918169 - 22918107
Alignment:
Q  289 ttttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||| ||||||||||||||||||| || |||||| |||| || |||| ||||||| |||||    
T  22918169 ttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattt 22918107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 24532962 - 24532908
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||    
T  24532962 ctctcatactcacattatgtttttactttctctctctattgctttggtttttgtg 24532908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 40112954 - 40112892
Alignment:
Q  289 ttttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||| ||||||||||||||||||| || |||||| |||| || |||| ||||||| |||||    
T  40112954 ttttactttctctctctattgctttggtttttgtgccactaccttatttcctttgtaaaattt 40112892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 338
Target Start/End: Complemental strand, 41989767 - 41989693
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaatttt 338  Q
    |||| |||||||||||||||| |  |||||| |||||||| |||||||||| || |||||| |||| || |||||    
T  41989767 tttctctctcatactcacattatatttttactttctctctttattgctttggtttttgtgccactacctcatttt 41989693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 43942683 - 43942733
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttg 314  Q
    |||| |||||||||||||||| |  |||||| |||||||||||||||||||    
T  43942683 tttctctctcatactcacattatctttttactttctctctctattgctttg 43942733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 44895572 - 44895510
Alignment:
Q  289 ttttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||| ||||||||||||||||||| || |||||| |||| || |||| ||||||| |||||    
T  44895572 ttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattt 44895510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 371
Target Start/End: Original strand, 7817684 - 7817790
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatcta-attttctttgtataatttggttgtccaac 362  Q
    |||| |||||||||||||||| ||  ||||| || ||||||||||||||||||| | |||||| |||| |  ||||||||||| | | ||||||||  |     
T  7817684 tttctctctcatactcacattatt--tttactttatctctctattgctttgattttcgtgcaaatatccactttttctttgtaaattatggttgtcacat 7817781  T
Q  363 aagttgtca 371  Q
    |||||||||    
T  7817782 aagttgtca 7817790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 21559850 - 21559906
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||||||||||||||| || |||||| || ||||||||||||||||||| | ||||||    
T  21559850 ctctcatactcacattatt-ttttactttatctctctattgctttgattttcgtgcaa 21559906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 351
Target Start/End: Complemental strand, 24614335 - 24614254
Alignment:
Q  270 tctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    ||||||||||||||| | ||||||  ||||| ||||||||||||| || |||||  |||| || |||| ||||||| |||||    
T  24614335 tctcatactcacattatcattttattttctcactctattgctttggtttttgtgtcactacctcatttcctttgtaaaattt 24614254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 35822999 - 35822918
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    |||| |||||| |||| |||| |  |||||| |||||||||||||||||||||| |||||| | ||  || |||||||||||    
T  35822999 tttctctctcacactcgcattatatttttactttctctctctattgctttgatttttgtgccaatacatatttttctttgta 35822918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 42584849 - 42584902
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgatt 317  Q
    |||| |||||||||||||||| |  |||||| || |||||||||||||||||||    
T  42584849 tttctctctcatactcacattatatttttactttatctctctattgctttgatt 42584902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 33776411 - 33776487
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    |||||||||||||||| || ||| || ||||||||||||| ||||| || | |||  |||||||| ||| |||||||    
T  33776411 ctctcatactcacattattttttaactttctctctctattactttggttttcgtgtcactatctattttcctttgta 33776487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 34507221 - 34507177
Alignment:
Q  273 catactcacattgttattttacgttctctctctattgctttgatt 317  Q
    |||||||||||| |  |||||| ||||||||||||||||||||||    
T  34507221 catactcacattatatttttactttctctctctattgctttgatt 34507177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 7e-31; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 11965840 - 11965948
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||| ||||||||| || ||| |||||||||||||||||||||| |||||| ||||||||| ||||| |||||||| |||||||||||||    
T  11965840 tttctctctcatacacacattgttcttctactttctctctctattgctttgatttttgtgccactatctaaatttctatgtataatgtggttgtccaaca 11965939  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  11965940 agttgtcac 11965948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 264 - 371
Target Start/End: Complemental strand, 36587493 - 36587388
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||| | |||||||  ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||| ||||||||| |    
T  36587493 tttctctctcatactcacattatcattttac--tctctctctattgctttgatttttgtgccactatctaaatttctttgtataatttagttgtccaaaa 36587396  T
Q  364 agttgtca 371  Q
     |||||||    
T  36587395 ggttgtca 36587388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 31578486 - 31578589
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    |||||||||||||||| || |||||| || ||||||||||||||||||| |||||  |||| |||| ||||||||||||| || ||||||||||||||||    
T  31578486 ctctcatactcacattattcttttactttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataagttagttgtccaacaagttg 31578585  T
Q  369 tcac 372  Q
    ||||    
T  31578586 tcac 31578589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 371
Target Start/End: Complemental strand, 37316839 - 37316732
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||| ||||||||| || ||| |||||||||||||||||||||  |||||  |||| |||| |||||||||||||| |||||||||||||    
T  37316839 tttctctctcatacacacattgttcttctactttctctctctattgctttgatatttgtgtcactacctaaatttctttgtataatgtggttgtccaaca 37316740  T
Q  364 agttgtca 371  Q
    ||||||||    
T  37316739 agttgtca 37316732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 37731226 - 37731116
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||||| ||||||||| ||||||||| || ||| ||| |||||||||||||||||  |||||| |||| |||| |||||||||||||| ||||||| |||    
T  37731226 attttctctctcatacacacattgttcttctactttcgctctctattgctttgatatttgtgccactacctaaatttctttgtataatgtggttgtgcaa 37731127  T
Q  362 caagttgtcac 372  Q
    |||||||||||    
T  37731126 caagttgtcac 37731116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 30831806 - 30831909
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    ||||||||||||||||||| || ||| ||||||||||||| |||||||| |||||| ||||||||| |  |||||||||||||| ||||  || ||||||    
T  30831806 ctctcatactcacattgttcttctactttctctctctattactttgatttttgtgccactatctaaatccctttgtataatttgattgtataagaagttg 30831905  T
Q  369 tcac 372  Q
    ||||    
T  30831906 tcac 30831909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 8847540 - 8847642
Alignment:
Q  270 tctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgt 369  Q
    |||||||| |||||| || || ||| |||||||||||||||||||||  || | | ||||||||| ||||||||||||||  ||||||||||||||||||    
T  8847540 tctcatacacacattattcttctactttctctctctattgctttgatatttataccactatctaaatttctttgtataatgcggttgtccaacaagttgt 8847639  T
Q  370 cac 372  Q
    |||    
T  8847640 cac 8847642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 18254234 - 18254125
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||| ||||||| |||| ||||||| || ||||||||||  |     
T  18254234 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactatctcatttcctttgtaaaattttggttgtcacaa 18254135  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  18254134 aagttgtcac 18254125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 14871951 - 14872023
Alignment:
Q  297 tctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgt 369  Q
    ||||||||||||| ||||||| |||||| |||| |||| ||||||||||||||||| ||||| ||||||||||    
T  14871951 tctctctctattgttttgatttttgtgccactacctaaatttctttgtataatttgattgtctaacaagttgt 14872023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 37003657 - 37003765
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||||||||||||| || ||| |||||||| |||| |||||||| || ||| |||||||||    |||||||||||||||||||  || |    
T  37003657 tttctctctcatactcacattgttcttctacattctctctttattactttgatttttatgccactatctaaacccctttgtataatttggttgtataaga 37003756  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  37003757 agttgtcac 37003765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 9207636 - 9207723
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| || |||||| ||||||||||||||||||| || |||||| |||| || |||| ||||||| |||||    
T  9207636 tttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattt 9207723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 26481108 - 26481006
Alignment:
Q  270 tctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgt 369  Q
    |||||||||||| ||||| || ||| |||| |||||||| |||||||| |||||  ||||||||| |  |||||||||||||||||||  || |||||||    
T  26481108 tctcatactcacgttgtttttctactttctttctctattactttgatttttgtgtcactatctaaatccctttgtataatttggttgtataagaagttgt 26481009  T
Q  370 cac 372  Q
    |||    
T  26481008 cac 26481006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 372
Target Start/End: Original strand, 44239097 - 44239191
Alignment:
Q  278 tcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    ||||||| ||||||||  || ||||||||||||||||||| |||||  |||  |||| |||||||||||||||| ||||||||| || |||||||    
T  44239097 tcacattattattttattttatctctctattgctttgatttttgtgtcactgcctaaatttctttgtataatttagttgtccaaaaaattgtcac 44239191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 18510722 - 18510830
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||||||||| ||||||||||||  || ||| ||||||||||| | |||||||| |||||  | || |||| ||||||||||| ||||||||||| || |    
T  18510722 tttccctctcttactcacattgtccttctactttctctctctacttctttgatttttgtgtcattacctaaatttctttgtattatttggttgtctaata 18510821  T
Q  364 agttgtcac 372  Q
     ||||||||    
T  18510822 ggttgtcac 18510830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 7698231 - 7698304
Alignment:
Q  278 tcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    ||||||| || |||||| |||||| ||||||||||||||| |||||| |||| ||||||| ||||||| |||||    
T  7698231 tcacattatttttttactttctctttctattgctttgatttttgtgccactacctaatttcctttgtaaaattt 7698304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 19916702 - 19916810
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||| ||||||||| || ||| |||||||||||||  ||||||  |||||  |||  |||| |||||||||||||| | ||| |||||||    
T  19916702 tttctctctcatacacacattgttcttctactttctctctctattattttgatatttgtgtcactgcctaaatttctttgtataatgtagttatccaaca 19916801  T
Q  364 agttgtcac 372  Q
    | |||||||    
T  19916802 aattgtcac 19916810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 372
Target Start/End: Original strand, 14877077 - 14877144
Alignment:
Q  305 tattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    ||||| ||||||| |||||| |||| |||| |||||||||  |||||||||||| |||||||||||||    
T  14877077 tattgttttgatttttgtgccactacctaaatttctttgttaaatttggttgtctaacaagttgtcac 14877144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 351
Target Start/End: Complemental strand, 34945115 - 34945028
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||  |  |||||| |||||||||||||||||||||| |||||| |||| || ||||  |||||| |||||    
T  34945115 tttctctctcatactcacatgatctttttactttctctctctattgctttgatttttgtgccactacctcatttcttttgtaaaattt 34945028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 29449258 - 29449320
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||| |||||||| ||||||||    
T  29449258 tttctctctcatactcacattatatttttactttctctctctattactttgatttttgtgcaa 29449320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 2427956 - 2427915
Alignment:
Q  331 ctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  2427956 ctaattttctttgtataatttagttgtccaacaaattgtcac 2427915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 12889856 - 12889788
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatcta 333  Q
    |||| |||||||||||||||| || |||||  || ||||||||||||||||||| |||||||| ||||||    
T  12889856 tttctctctcatactcacattatt-ttttaatttatctctctattgctttgatttttgtgcaaatatcta 12889788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 28245775 - 28245855
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    |||| |||||||||||||||| || |||||| || |||||||||||||||| || | |||||| || ||| |||||||||||    
T  28245775 tttctctctcatactcacattatt-ttttactttatctctctattgctttggttttcgtgcaaatacctatttttctttgta 28245855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 361
Target Start/End: Complemental strand, 32944528 - 32944431
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||| |||||||| ||||||| |  |||||| || ||||||||||||||||||| |||||  |||| |||| ||| ||| ||||||||  ||||||||    
T  32944528 tttctctctcatagtcacattctccttttactttttctctctattgctttgatttttgtgtcactacctaaatttttttatataatttaattgtccaa 32944431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 351
Target Start/End: Original strand, 41195628 - 41195717
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||| ||||||||||||||||    |||||| ||||||||||||||||||| || |||||  | ||||| |||| ||||||| |||||    
T  41195628 attttctctctcatactcacattacctttttactttctctctctattgctttggtttttgtgtcaatatctcatttcctttgtaaaattt 41195717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 358
Target Start/End: Original strand, 20911847 - 20911942
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatcta-attttctttgtataatttggttgtc 358  Q
    |||| |||||||||||| ||| || |||||| || |||||||||||||||| ||   |||||| ||||||  ||||||||||| ||| ||||||||    
T  20911847 tttctctctcatactcaaattatttttttactttatctctctattgctttggtttccgtgcaaatatctattttttctttgtaaaatatggttgtc 20911942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 22416259 - 22416346
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| ||| |||||| ||||| |  |||||| ||||||||||||||||||| || |||||| |||  || |||||||||||| |||||    
T  22416259 tttctctcccatacttacattatctttttactttctctctctattgctttggtttttgtgccactgcctcattttctttgtaaaattt 22416346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 43487425 - 43487512
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| ||||||| |||||||| || |||||| |||| |||||||||||||| || |||||  |||| || |||| ||||||| |||||    
T  43487425 tttctctctcatgctcacattatttttttactttctttctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattt 43487512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 36802943 - 36803004
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||| |||||||||||||||| || |||||| || |||||||||| |||||||| ||||||||    
T  36802943 tttctctctcatactcacattatt-ttttactttatctctctattactttgatttttgtgcaa 36803004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 40937088 - 40937027
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||| |||||||||||||||| || |||||| || ||||||||||||||||||| | ||||||    
T  40937088 tttctctctcatactcacattatt-ttttactttatctctctattgctttgattttcgtgcaa 40937027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 9760064 - 9760113
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgcttt 313  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||||||||    
T  9760064 tttctctctcatactcacattatctttttactttctctctctattgcttt 9760113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 19109118 - 19109053
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaacta 329  Q
    |||| |||||||||| ||||| |  |||||  |||||||||||||||||||||| |||||| ||||    
T  19109118 tttctctctcatacttacattatctttttattttctctctctattgctttgatttttgtgccacta 19109053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 36774585 - 36774638
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgatt 317  Q
    |||| |||||||| ||||||| |  |||||| ||||||||||||||||||||||    
T  36774585 tttctctctcatattcacattatatttttactttctctctctattgctttgatt 36774638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 41042305 - 41042350
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttg 314  Q
    |||||||||||||||| |  |||||| |||||||||||||||||||    
T  41042305 ctctcatactcacattatctttttactttctctctctattgctttg 41042350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 42372526 - 42372579
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgatt 317  Q
    |||| |||||||||||||||| || |||||| || |||||||||| ||||||||    
T  42372526 tttctctctcatactcacattatttttttactttatctctctattcctttgatt 42372579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 43057111 - 43057208
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||| |||| ||||||||||| | ||||||  || | ||||||||||||||||| |||||  ||||  ||| ||| ||| |||||||| |||||||||    
T  43057111 tttctctcttatactcacattatcattttattttttttctctattgctttgatttttgtgtcactacttaaatttatttatataatttagttgtccaa 43057208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 372
Target Start/End: Original strand, 2076640 - 2076724
Alignment:
Q  289 ttttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaacaagttgtcac 372  Q
    |||||| |||||| ||||||||||||||| |||||  | || || |||||||||||| || ||||||||||  | ||||||||||    
T  2076640 ttttactttctctttctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcac 2076724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 9194287 - 9194347
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||| |||||||||||||||| |  |||||| |||||||||||||| |||| || ||||||    
T  9194287 tttctctctcatactcacattatctttttactttctctctctattgttttggtttttgtgc 9194347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 14328433 - 14328481
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgatt 317  Q
    |||||||||||||||| |  |||||| |||||||||| |||||||||||    
T  14328433 ctctcatactcacattatatttttactttctctctctgttgctttgatt 14328481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 19843531 - 19843591
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||| |||||||||||| ||| |  |||| | |||||||||||||||||||||| ||||||    
T  19843531 tttctctctcatactcagattatatttttcctttctctctctattgctttgatttttgtgc 19843591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 48983692 - 48983584
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||  ||||| ||| |||||| ||||||||||||||| |||||| | ||||||| |||||||||| |||||||||||||||||    
T  48983692 tttctctctcatactcacatgattattctactttctctttctattgctttgatttttgtgccattatctaaatttctttgtaaaatttggttgtccaaca 48983593  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  48983592 agttgtcac 48983584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 47642631 - 47642525
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||| | || |||| |||||| ||||||||||| ||| |||||  ||||||||| ||||||||||||||||||||||||||||    
T  47642631 tttctctctcatactcacattatcatattactttctctttctattgctttaatttttgtgtcactatctaaatttctttgtataatttggttgtccaaca 47642532  T
Q  364 agttgtc 370  Q
    |||||||    
T  47642531 agttgtc 47642525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 48858870 - 48858978
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||| | ||||||| | |||||||||||||||||||| |||||  ||||||||| |||||||||||||||| ||||||||| |    
T  48858870 tttctctctcatactcacattatcattttacttcctctctctattgctttgatttttgtgtcactatctaaatttctttgtataatttagttgtccaaaa 48858969  T
Q  364 agttgtcac 372  Q
     ||||||||    
T  48858970 ggttgtcac 48858978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 7919086 - 7918978
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||| |||||  || ||| || |||||||||| |||||||| |||||| |||| |||| ||||||||||||||||||||||| ||||    
T  7919086 tttctctctcatactcatattgtccttctactttatctctctattactttgatttttgtgccactacctaaatttctttgtataatttggttgtctaaca 7918987  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  7918986 agttgtcac 7918978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 40439864 - 40439756
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||| ||||||||| || ||| |||||||||||||||||||||  |||||  |||| |||| |||||||||||||| |||||||||||||    
T  40439864 tttctctctcatacacacattgttcttctactttctctctctattgctttgatatttgtgacactacctaaatttctttgtataatgtggttgtccaaca 40439765  T
Q  364 agttgtcac 372  Q
    | |||||||    
T  40439764 aattgtcac 40439756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 4213119 - 4213227
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||||||||||||| || ||| ||||||||||||| |||||||| |||||  ||||||||| | | ||| ||||||||||||||  || |    
T  4213119 tttctctctcatactcacattgttcttctaccttctctctctattactttgatttttgtgtcactatctaaatctttttatataatttggttgtataaga 4213218  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  4213219 agttgtcac 4213227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 367
Target Start/End: Complemental strand, 17082767 - 17082664
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||| |||||| || || ||  ||||||||||||| |||||||  |||||| |||| |||| |||||||||||||| |||||||||||||    
T  17082767 tttctctctcatacacacattattcttctattttctctctctattactttgatatttgtgccactacctaaatttctttgtataatatggttgtccaaca 17082668  T
Q  364 agtt 367  Q
    ||||    
T  17082667 agtt 17082664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 364
Target Start/End: Original strand, 23332322 - 23332416
Alignment:
Q  270 tctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaa 364  Q
    |||||||| ||||||||| |||||| ||  |||||||||||||||||  |||||  |||| |||| |||||||||||||| ||||||||||||||    
T  23332322 tctcatacacacattgtttttttacttttactctctattgctttgatatttgtgttactacctaaatttctttgtataatgtggttgtccaacaa 23332416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 4857957 - 4858054
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||| ||||||| | ||||||||| || ||| |||||||||||||||||||||  |||||| ||||  ||| |||||||||||||| |||||||||||    
T  4857957 tttctctctcatgcacacattgttcttctactttctctctctattgctttgatatttgtgccactacttaaatttctttgtataatgtggttgtccaa 4858054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 38878925 - 38878817
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||  ||||||||| || ||| || ||| ||||||||||||||| |||||  |||| |||| ||||||| |||||| | |||||||||||    
T  38878925 tttctctctcatatacacattgttcttctactttttctttctattgctttgatttttgtgtcactacctaaatttctttatataatatagttgtccaaca 38878826  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  38878825 agttgtcac 38878817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 42468639 - 42468747
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||| ||||| ||||||||| || ||||| ||||| ||| ||| |||||  |||| |||| ||||||||||||| || |||||||||||    
T  42468639 tttctctctcatacttacattattattttactttatctctttattgttttaatttttgtgtcactacctaaatttctttgtataagttagttgtccaaca 42468738  T
Q  364 agttgtcac 372  Q
    | |||||||    
T  42468739 aattgtcac 42468747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 5771772 - 5771660
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctat----tgctttgattattgtgcaactatctaattttctttgtataatttggttgtcc 359  Q
    |||| |||||||||||||||| | ||||||| ||||||||||||    |||||||||| || ||| |||| |||| |||||||||||||||| ||||||     
T  5771772 tttctctctcatactcacattatcattttactttctctctctatctattgctttgatttttctgccactacctaaatttctttgtataatttagttgtct 5771673  T
Q  360 aacaagttgtcac 372  Q
    || | ||||||||    
T  5771672 aaaaggttgtcac 5771660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 31088232 - 31088336
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaacaagtt 367  Q
    |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||| |||| || ||||| |||||| || ||||||||||  | |||||    
T  31088232 ctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactacctcattttttttgtaaaattttggttgtcacaaaagtt 31088331  T
Q  368 gtcac 372  Q
    |||||    
T  31088332 gtcac 31088336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 35369752 - 35369855
Alignment:
Q  270 tctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaacaagttg 368  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||| |||||  |||| || |||| |||| || || ||||||||||  | ||||||    
T  35369752 tctcatactcacattgtctttttactttctctctctattgctttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttg 35369851  T
Q  369 tcac 372  Q
    ||||    
T  35369852 tcac 35369855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 649815 - 649924
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||  |||| || |||| ||||||| || ||||||||||  |     
T  649815 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaa 649914  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  649915 aagttgtcac 649924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 351
Target Start/End: Original strand, 23645462 - 23645544
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||||||||||||| |  |||||| |||||||||||||| |||| || |||||| |||| || |||| ||||||| |||||    
T  23645462 ctctcatactcacattatctttttactttctctctctattgttttggtttttgtgccactacctcatttcctttgtaaaattt 23645544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 27465082 - 27464973
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| |||||||||||||||  |  |||||| || |||||||||||||||| || |||||| |||| || |||| ||||||| || ||||||||||  |     
T  27465082 tttctctctcatactcacatgatctttttactttgtctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaa 27464983  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  27464982 aagttgtcac 27464973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 33100854 - 33100963
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| |||||||||||||||| |  |||||| |||||||||||||| ||||||| |||||  |||| || |||| |||| || || ||||||||||  |     
T  33100854 tttctctctcatactcacattatctttttactttctctctctattgttttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaa 33100953  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  33100954 aagttgtcac 33100963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 9988006 - 9988058
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    ||||||||||||| |  |||||| |||||||||||||||||||||| ||||||    
T  9988006 tcatactcacattatatttttactttctctctctattgctttgatttttgtgc 9988058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 37619590 - 37619677
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| |  |||||  ||||||||||||||| |||||| |||||| | || || |||| ||||||| |||||    
T  37619590 tttctctctcatactcacattatctttttaatttctctctctattgcgttgatttttgtgccaatacctcatttcctttgtaaaattt 37619677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 351
Target Start/End: Complemental strand, 44519176 - 44519089
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||| ||||| ||||| |  |||||| |||||||||||||||||||||| |||||| | || || |||| ||||||| |||||    
T  44519176 tttctctcttatacttacattatctttttactttctctctctattgctttgatttttgtgctaatacctcatttcctttgtaaaattt 44519089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 351
Target Start/End: Complemental strand, 49065381 - 49065302
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    ||||||||||||| |  |||||| ||||||||||||||||||| || |||||| | ||  | |||||||||||| |||||    
T  49065381 tcatactcacattatgtttttactttctctctctattgctttggtttttgtgccaatacttcattttctttgtaaaattt 49065302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 3982026 - 3981964
Alignment:
Q  289 ttttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||| |||||||||||||| |||| ||||||||  | ||||| |||||||||||| |||||    
T  3982026 ttttactttctctctctattgttttggttattgtgtcaatatctcattttctttgtaaaattt 3981964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 33054112 - 33054051
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||| |||||||||||||||| || |||||| || ||||||||| ||||||||| ||||||||    
T  33054112 tttctctctcatactcacattatt-ttttactttatctctctatggctttgatttttgtgcaa 33054051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 48220168 - 48220107
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||| |||||||||||||||| || |||||| || |||||||||| |||||||| ||||||||    
T  48220168 tttctctctcatactcacattatt-ttttactttatctctctatttctttgatttttgtgcaa 48220107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 50726248 - 50726194
Alignment:
Q  289 ttttacgttctctctctattgctttgattattgtgcaactatctaattttctttg 343  Q
    |||||| |||||||||||||| ||||||| |||||| |||| || ||||||||||    
T  50726248 ttttactttctctctctattgttttgatttttgtgccactacctcattttctttg 50726194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 18336193 - 18336253
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgca 325  Q
    |||| ||||||||||||||||  | |||||| || ||||||||||||||||||| |||||||    
T  18336193 tttctctctcatactcacattagt-ttttactttatctctctattgctttgatttttgtgca 18336253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 360
Target Start/End: Original strand, 33076174 - 33076263
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatt-tggttgtcca 360  Q
    ||||||||||||| |  |||||  ||||||||||||| |||||||  |||||| | ||  |||||||||||||| |||| ||||||||||    
T  33076174 tcatactcacattatatttttattttctctctctattactttgatatttgtgccaatacataattttctttgtaaaattgtggttgtcca 33076263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 48326014 - 48326067
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgatt 317  Q
    |||| |||||||||| ||||| || |||||| || |||||||||||||||||||    
T  48326014 tttctctctcatacttacattatttttttactttatctctctattgctttgatt 48326067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 351
Target Start/End: Original strand, 48470683 - 48470772
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||| ||||||||||||||||    |||||| |||||||||||||| |||| ||  ||||| | ||||| |||| ||||||| |||||    
T  48470683 attttctctctcatactcacattacctttttactttctctctctattgttttggtttctgtgccaatatctcatttcctttgtaaaattt 48470772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 49660231 - 49660276
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttg 314  Q
    |||||||||||||||| || |||||| ||||||||||||| |||||    
T  49660231 ctctcatactcacattatttttttactttctctctctattactttg 49660276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 371
Target Start/End: Original strand, 8200122 - 8200229
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatcta-attttctttgtataatttggttgtccaac 362  Q
    |||| |||||||||||||||| || |||||| || || ||||||||||||| || | |||||||||  ||  ||||||||||| | | ||||||||| |     
T  8200122 tttctctctcatactcacattatt-ttttactttatccctctattgctttggttttcgtgcaactacgtactttttctttgtaaattatggttgtcccat 8200220  T
Q  363 aagttgtca 371  Q
    |||||||||    
T  8200221 aagttgtca 8200229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 345
Target Start/End: Original strand, 11597692 - 11597764
Alignment:
Q  273 catactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    |||||||||||| |  |||||| |||||||||||||| |||| || | |||| | |||||| |||||||||||    
T  11597692 catactcacattatgtttttactttctctctctattgttttggttttcgtgctaatatctacttttctttgta 11597764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 30735313 - 30735273
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattg 309  Q
    |||||||||||||||| || |||||| ||||||||||||||    
T  30735313 ctctcatactcacattatttttttactttctctctctattg 30735273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 34818069 - 34818009
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||| |||||||||||| ||| |  |||||| |||||| ||||||||||||||| ||||||    
T  34818069 tttctctctcatactcatattatatttttactttctctttctattgctttgatttttgtgc 34818009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 35136897 - 35136952
Alignment:
Q  270 tctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||||||||||||||  | |||||| || ||||||||||||||||||| ||||||||    
T  35136897 tctcatactcacattact-ttttactttatctctctattgctttgatttttgtgcaa 35136952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 359
Target Start/End: Complemental strand, 37588691 - 37588605
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatcta-attttctttgtataatttggttgtcc 359  Q
    ||||||||||||  || |||||| || ||||||||||||||||||| | |||||| |||| | |||||||||||| | |||||||||||    
T  37588691 tcatactcacataatt-ttttactttatctctctattgctttgattttcgtgcaa-tatcaatattttctttgtaaattttggttgtcc 37588605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 45640347 - 45640434
Alignment:
Q  264 tttccctctcatactcacattgttatttta-cgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| || ||||  | || ||||||||||||||||||| |||||| | ||||| | |||||||||| |||||    
T  45640347 tttctctctcatactcacattattttttttgctttatctctctattgctttgatttttgtgccaatatctca-tttctttgtaaaattt 45640434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 48261194 - 48261246
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    ||||||||||||| |  |||||| ||||||||||||||||||| || ||||||    
T  48261194 tcatactcacattatgtttttactttctctctctattgctttggtttttgtgc 48261246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 49570043 - 49570103
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||| |||||||| ||||||| |  |||||| |||||||||||||| ||||||| ||||||    
T  49570043 tttctctctcatattcacattatatttttactttctctctctattgttttgatttttgtgc 49570103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 7e-28; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 269 - 372
Target Start/End: Complemental strand, 18065109 - 18065006
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    ||||||||| ||||||||| || ||| |||||||||||||||||||||  |||||| |||| |||| |||||||||||||| ||||||||||||||||||    
T  18065109 ctctcatacacacattgttcttctactttctctctctattgctttgatatttgtgccactacctaaatttctttgtataatgtggttgtccaacaagttg 18065010  T
Q  369 tcac 372  Q
    ||||    
T  18065009 tcac 18065006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 369
Target Start/End: Original strand, 33712367 - 33712472
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||| ||||||||| || ||| |||||||||| ||||||||||  ||||||||||| |||| |||||||||||||| |||||||||||||    
T  33712367 tttctctctcatacacacattgttcttctactttctctctctgttgctttgatatttgtgcaactacctaaatttctttgtataatgtggttgtccaaca 33712466  T
Q  364 agttgt 369  Q
    ||||||    
T  33712467 agttgt 33712472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 8645355 - 8645463
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||||||||||||  || |  |||| |||| |||||||||||||||| ||||||||| |    
T  8645355 tttctctctcatactcacattatccttttactttctctctctattgctttgatttatgcgtcactacctaaatttctttgtataatttagttgtccaaaa 8645454  T
Q  364 agttgtcac 372  Q
     ||||||||    
T  8645455 ggttgtcac 8645463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 8505798 - 8505689
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt-ggttgtccaac 362  Q
    |||| |||||||| ||||||| |  |||||| || ||||||||||||||||||| |||| |||||| |||| ||||||||||||||||  |||||||||     
T  8505798 tttctctctcatattcacattatccttttactttttctctctattgctttgatttttgtacaactacctaaatttctttgtataatttaagttgtccaaa 8505699  T
Q  363 aagttgtcac 372  Q
    || |||||||    
T  8505698 aaattgtcac 8505689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 357
Target Start/End: Complemental strand, 11635559 - 11635466
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgt 357  Q
    |||| |||||||| |||||||| | || ||  ||||||||||||| |||||||| |||||| ||||||||| | ||||||||||||||||||||    
T  11635559 tttctctctcatattcacattgctcttctattttctctctctattactttgatttttgtgccactatctaaatctctttgtataatttggttgt 11635466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 296 - 371
Target Start/End: Complemental strand, 5739756 - 5739681
Alignment:
Q  296 ttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtca 371  Q
    |||||| ||||||||||||||| |||||  |||| |||||||||||| | ||||||| ||||||||||||||||||    
T  5739756 ttctctttctattgctttgatttttgtgtcactacctaattttctttatttaatttgattgtccaacaagttgtca 5739681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 299 - 361
Target Start/End: Original strand, 14910258 - 14910320
Alignment:
Q  299 tctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    ||||||||||||||||||| |||||  |||| |||| |||||||||||||||| |||||||||    
T  14910258 tctctctattgctttgatttttgtgtcactacctaaatttctttgtataatttagttgtccaa 14910320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 552844 - 552948
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaacaagtt 367  Q
    |||||||| ||||||| |  |||||| ||||||||||||||||||| || |||||| |||| || |||| ||||||| || ||||||||||  | |||||    
T  552844 ctctcatattcacattatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagtt 552943  T
Q  368 gtcac 372  Q
    |||||    
T  552944 gtcac 552948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 345
Target Start/End: Original strand, 30945862 - 30945941
Alignment:
Q  266 tccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    ||||||||||||||||||| | ||||||| || ||| ||||||| ||||||| | |||| | |||||| |||||||||||    
T  30945862 tccctctcatactcacattatgattttactttatctatctattgatttgattttcgtgccaatatctacttttctttgta 30945941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 359
Target Start/End: Original strand, 3772427 - 3772497
Alignment:
Q  289 ttttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtcc 359  Q
    |||||| || ||| ||||||| ||||||| |||||  ||||||||| |||||||||||| |||||||||||    
T  3772427 ttttaccttttctttctattgatttgatttttgtgtcactatctaaatttctttgtatattttggttgtcc 3772497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 351
Target Start/End: Original strand, 11612239 - 11612321
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| ||||||||||| |  |||||| |||| ||||||||||||| ||| |||||||| || || |||||||||||| |||||    
T  11612239 ctcttatactcacattatctttttactttctttctctattgctttaatttttgtgcaaatacctcattttctttgtaaaattt 11612321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 351
Target Start/End: Original strand, 26595400 - 26595482
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||  | || || |||||||||||| |||||    
T  26595400 ctctcatactcacattatgtttttactttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattt 26595482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 34047433 - 34047542
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| |||||||||||||||| |  |||||  || |||||||||||||||| || |||||| | |||||  ||||||||||| || ||||||||||  |     
T  34047433 tttctctctcatactcacattatctttttatcttatctctctattgctttggtttttgtgccaatatctctttttctttgtaaaattttggttgtcacaa 34047532  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  34047533 aagttgtcac 34047542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 1156776 - 1156844
Alignment:
Q  274 atactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttcttt 342  Q
    ||||||||||| || |||||| ||||||||||||| ||||| || |||||| ||||||| |||| ||||    
T  1156776 atactcacattatttttttactttctctctctattactttggtttttgtgccactatctcatttccttt 1156844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 25811863 - 25811803
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||||||||| || ||||||    
T  25811863 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgc 25811803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 351
Target Start/End: Complemental strand, 5080584 - 5080505
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    ||||||||||||| || |||||| ||||||||||||||||||  || |||||  |||| || |||| ||||||| |||||    
T  5080584 tcatactcacattatttttttactttctctctctattgctttagtttttgtgtcactacctcatttcctttgtaaaattt 5080505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 22079588 - 22079529
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    |||| |||||| ||||||||| |  |||||| |||||||||||||||||||||| |||||    
T  22079588 tttctctctcacactcacattatgtttttactttctctctctattgctttgatttttgtg 22079529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 8098617 - 8098563
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||    
T  8098617 ctctcatactcacattttctttttactttctctctctattgctttggtttttgtg 8098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 3853300 - 3853251
Alignment:
Q  296 ttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    |||||||||||||||||||||| |||||  | ||||| ||||||||||||    
T  3853300 ttctctctctattgctttgatttttgtgtcaatatctcattttctttgta 3853251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 10335602 - 10335647
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttg 314  Q
    |||||||||||||||| || |||||| ||||||||||||| |||||    
T  10335602 ctctcatactcacattatttttttactttctctctctattactttg 10335647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 371
Target Start/End: Original strand, 17182144 - 17182252
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||||| |||||||| |||| ||||| |  ||| || |||||||||| |||||||| || ||| ||||||||| |  |||||||||||||| ||||  ||    
T  17182144 attttctctctcatattcacgttgtt-tactactttttctctctattactttgatttttatgccactatctaaatccctttgtataatttgattgtataa 17182242  T
Q  362 caagttgtca 371  Q
     |||||||||    
T  17182243 gaagttgtca 17182252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 372
Target Start/End: Complemental strand, 32316945 - 32316844
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaacaagttgtc 370  Q
    ||||||||||||| |  |||||| || |||||||||||||||| || |||||  | || || |||||||||||| || ||||||||||  | ||||||||    
T  32316945 tcatactcacattatctttttactttatctctctattgctttggtttttgtgtcagtacctcattttctttgtaaaattttggttgtcacaaaagttgtc 32316846  T
Q  371 ac 372  Q
    ||    
T  32316845 ac 32316844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 30956123 - 30956199
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    |||| ||| ||||||| | ||||||| || ||||||||||| ||||||  | |||| | ||||||||||||||||||    
T  30956123 ctcttatattcacattatcattttactttatctctctattgatttgatcttcgtgccaatatctaattttctttgta 30956199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 8979 - 8869
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||||| ||||||||| ||||||||| || ||| |||||||||||||||||||||| |||||  |||| |||| |||||||||||||| |||||||||||    
T  8979 attttctctctcatacacacattgttcttctactttctctctctattgctttgatttttgtgtcactacctaaatttctttgtataatgtggttgtccaa 8880  T
Q  362 caagttgtcac 372  Q
     ||||||||||    
T  8879 aaagttgtcac 8869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 262 - 372
Target Start/End: Original strand, 44090931 - 44091041
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||||| ||||||||| ||||||||| || ||| |||||||||||||||||||||| |||||  |||| |||| |||||||||||||| |||||||||||    
T  44090931 attttctctctcatacacacattgttcttctactttctctctctattgctttgatttttgtgtcactacctaaatttctttgtataatgtggttgtccaa 44091030  T
Q  362 caagttgtcac 372  Q
     ||||||||||    
T  44091031 aaagttgtcac 44091041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 44061764 - 44061864
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||| | ||||||| |||||| ||| ||||||||||| |||||  ||||||||| ||||||||||||||||||||||||||||    
T  44061764 tttctctctcatactcacattatcattttactttctctttctgttgctttgatttttgtgtcactatctaaatttctttgtataatttggttgtccaaca 44061863  T
Q  364 a 364  Q
    |    
T  44061864 a 44061864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 34435763 - 34435653
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||||| ||||||||| ||||||||| || ||| ||| |||||||||||||||||  |||||| |||| |||| |||||||||||||| ||||||| |||    
T  34435763 attttctctctcatacacacattgttcttctactttcgctctctattgctttgatatttgtgccactacctaaatttctttgtataatgtggttgtgcaa 34435664  T
Q  362 caagttgtcac 372  Q
    |||||||||||    
T  34435663 caagttgtcac 34435653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 372
Target Start/End: Complemental strand, 33107884 - 33107783
Alignment:
Q  271 ctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtc 370  Q
    ||||||| ||||||||| || ||| |||||||||| ||||||||||  ||||||||||| |||| |||||||||||||| |||||||||||||| |||||    
T  33107884 ctcatacacacattgttcttctactttctctctctgttgctttgatatttgtgcaactacctaaatttctttgtataatgtggttgtccaacaaattgtc 33107785  T
Q  371 ac 372  Q
    ||    
T  33107784 ac 33107783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 1068653 - 1068761
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||| ||||||||| || ||| |||||||||||||||||||||  ||||   |||| |||| |||||||||||||| |||||||||||||    
T  1068653 tttctctctcatacacacattgttcttctactttctctctctattgctttgatatttgtaacactacctaaatttctttgtataatgtggttgtccaaca 1068752  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  1068753 agttgtcac 1068761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 33451587 - 33451481
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||||||||||||  || ||| |||||||||||||||||||||| |||||| |||| |||| ||||||||||||||||| ||||| ||||    
T  33451587 tttctctctcatactcacattgtc-ttctactttctctctctattgctttgatttttgtgccactacctaa-tttctttgtataatttgattgtctaaca 33451490  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  33451489 agttgtcac 33451481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 269 - 372
Target Start/End: Complemental strand, 5601006 - 5600903
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    |||||||||||||||  ||||| ||| |||||||| ||||||||||||| |||||  || |||||| |||||||||| |||||||||||||||||||||     
T  5601006 ctctcatactcacatgattattctactttctctctttattgctttgatttttgtgtcaccatctaaatttctttgtaaaatttggttgtccaacaagtta 5600907  T
Q  369 tcac 372  Q
    ||||    
T  5600906 tcac 5600903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 5639614 - 5639717
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    |||||||||||||||  ||||| ||| |||||||| ||||||||||||| |||||  || |||||| |||||||||| |||||||||||||||||||||     
T  5639614 ctctcatactcacatgattattctactttctctctttattgctttgatttttgtgtcaccatctaaatttctttgtaaaatttggttgtccaacaagtta 5639713  T
Q  369 tcac 372  Q
    ||||    
T  5639714 tcac 5639717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 26026949 - 26027051
Alignment:
Q  270 tctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgt 369  Q
    ||||||||||||||| | ||||||  |||||| ||||||||||| ||| ||||   ||||||||| ||||||||||||||||||||| ||||||||||||    
T  26026949 tctcatactcacattatcattttattttctctttctattgctttaatttttgtatcactatctaaatttctttgtataatttggttggccaacaagttgt 26027048  T
Q  370 cac 372  Q
    |||    
T  26027049 cac 26027051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 372
Target Start/End: Complemental strand, 15716995 - 15716892
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    |||||||||  |||||||| || ||| |||||||||||||||||||||  ||||   |||| |||| |||||||||||||| ||||||||||||||||||    
T  15716995 ctctcatacatacattgttcttctactttctctctctattgctttgatatttgtatcactacctaaatttctttgtataatgtggttgtccaacaagttg 15716896  T
Q  369 tcac 372  Q
    ||||    
T  15716895 tcac 15716892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 303 - 371
Target Start/End: Original strand, 9629649 - 9629717
Alignment:
Q  303 tctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtca 371  Q
    ||||||| ||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  9629649 tctattgttttgatttttgtgcaattatccaaatttctttgtataatttggttgtccaacaagttgtca 9629717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 269 - 372
Target Start/End: Complemental strand, 25987806 - 25987703
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    |||||||||||||||| | ||| ||| || ||||||||||||||||||| |||||  |||| |||| |||||||||||||||| ||||| ||| | ||||    
T  25987806 ctctcatactcacattatcattctactttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataatttagttgttcaaaaggttg 25987707  T
Q  369 tcac 372  Q
    ||||    
T  25987706 tcac 25987703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 44825494 - 44825597
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    |||||||||||||||| ||  | ||| |||||||||||||||||||||| ||||  |  ||||||| ||||||||||||||||| ||||| | |||||||    
T  44825494 ctctcatactcacattatttatctactttctctctctattgctttgatttttgtatatttatctaaatttctttgtataatttgattgtcaatcaagttg 44825593  T
Q  369 tcac 372  Q
    ||||    
T  44825594 tcac 44825597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 367
Target Start/End: Complemental strand, 45406003 - 45405905
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagtt 367  Q
    |||||||||||||||||   || ||| |||||||||||||| ||||||| |||||  | ||| ||| ||| ||||||||||||||||||||||||||||    
T  45406003 ctctcatactcacattgcccttctactttctctctctattgttttgatttttgtgttattatataaatttatttgtataatttggttgtccaacaagtt 45405905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 364
Target Start/End: Original strand, 12241134 - 12241219
Alignment:
Q  279 cacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaa 364  Q
    ||||||||| || ||| || ||||||||||||||||||| || ||  ||||||||| |||||||||||||| ||||||||||||||    
T  12241134 cacattgttcttctacattatctctctattgctttgatttttatgtcactatctaaatttctttgtataatgtggttgtccaacaa 12241219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 351
Target Start/End: Original strand, 22719484 - 22719573
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||| ||||||| |||||||| |  |||||| ||||||||||||||||||| || ||||||||||| || |||||||||||| |||||    
T  22719484 attttctctctcatgctcacattatctttttactttctctctctattgctttggtttttgtgcaactacctcattttctttgtaaaattt 22719573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 351
Target Start/End: Complemental strand, 32501223 - 32501134
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| |||||||| |||||  |||| || |||| ||||||| |||||    
T  32501223 attttctctctcatactcacattatttttttacgttctctctctattactttgatttttgtgtcactacctcatttcctttgtaaaattt 32501134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 43397827 - 43397914
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| || |||||| |||||| |||||| ||||| || |||||| ||||||| |||||||||||| |||||    
T  43397827 tttctctctcatactcacattatttttttactttctctttctattactttggtttttgtgccactatctcattttctttgtaaaattt 43397914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 28772148 - 28772042
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||| ||| || | |||||||  ||||||| ||||| ||||||| |||||| |||| |||| |||||||||||||||| ||||||||| |    
T  28772148 tttctctctcatacccactttatcattttac--tctctctttattgttttgatttttgtgccactacctaaatttctttgtataatttagttgtccaaaa 28772051  T
Q  364 agttgtcac 372  Q
     ||||||||    
T  28772050 ggttgtcac 28772042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 2730985 - 2730877
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||| ||||||| |  |||||| ||||||||| | |||||||||| |||||| ||||||||| ||| |||||||||||| ||| | ||| |    
T  2730985 tttctctctcatattcacattatctttttactttctctctcaactgctttgatttttgtgccactatctaaatttatttgtataatttagttattcaaaa 2730886  T
Q  364 agttgtcac 372  Q
     ||||||||    
T  2730885 ggttgtcac 2730877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 372
Target Start/End: Complemental strand, 12898949 - 12898845
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaacaagtt 367  Q
    |||||||||||||||| |  |||||| || |||||||||||||||| || ||| || ||||||| |||| ||||||| || ||||||||||  | |||||    
T  12898949 ctctcatactcacattatctttttactttatctctctattgctttggtttttgcgccactatctcatttcctttgtaaaattttggttgtcacaaaagtt 12898850  T
Q  368 gtcac 372  Q
    |||||    
T  12898849 gtcac 12898845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 10902751 - 10902838
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||| ||||||||| |  |||||| |||||||||||||||||||||| |||||| | ||  | |||||||||||| |||||    
T  10902751 tttctctctcacactcacattatgtttttactttctctctctattgctttgatttttgtgccaatacatcattttctttgtaaaattt 10902838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 27325804 - 27325891
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||  |  |||||| ||||||||||||||||||| || |||||| |||| || |||| ||||||| |||||    
T  27325804 tttctctctcatactcacatgatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattt 27325891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 351
Target Start/End: Complemental strand, 10839502 - 10839420
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||||||| ||||| |  |||||| |||||| |||||||||||| || |||||| | ||| |||||||||||||| |||||    
T  10839502 ctctcatacttacattatgtttttactttctctatctattgctttggtttttgtgccaatatttaattttctttgtaaaattt 10839420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 351
Target Start/End: Complemental strand, 31249544 - 31249462
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||||||||||||| |  |||||| ||||||||||||||||||| || |||| | |||| || |||| ||||||| |||||    
T  31249544 ctctcatactcacattatctttttactttctctctctattgctttggtttttgtaccactacctcatttcctttgtaaaattt 31249462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 351
Target Start/End: Complemental strand, 37449445 - 37449363
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||||||||||||| |  |||||| |||| |||||||||||||| || |||||| |||| || |||| ||||||| |||||    
T  37449445 ctctcatactcacattatctttttactttctgtctctattgctttggtttttgtgctactacctcatttcctttgtaaaattt 37449363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 16613686 - 16613742
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||||||||||||||| || |||||| || ||||||||||||||||||| ||||||||    
T  16613686 ctctcatactcacattatt-ttttactttatctctctattgctttgatttttgtgcaa 16613742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 369
Target Start/End: Original strand, 37172111 - 37172212
Alignment:
Q  268 cctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagtt 367  Q
    ||||||||||| ||| |||  || ||  |||||| || ||| |||||||| |||||  | || |||| ||||||||||||||||||||||||||||| ||    
T  37172111 cctctcatacttacactgtccttctattttctctttccattactttgatttttgtgtcattacctaaatttctttgtataatttggttgtccaacaaatt 37172210  T
Q  368 gt 369  Q
    ||    
T  37172211 gt 37172212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 35067207 - 35067267
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||||||||| || ||||||    
T  35067207 tttctctctcatactcacattatatttttactttctctctctattgctttggtttttgtgc 35067267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 371
Target Start/End: Original strand, 29025331 - 29025414
Alignment:
Q  289 ttttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaacaagttgtca 371  Q
    |||||| ||||||||||||||||||| || |||||  | || || |||||||||||| || ||||||||||| | |||||||||    
T  29025331 ttttaccttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtca 29025414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 36660475 - 36660416
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    |||| |||||||||| ||||| |  |||||| ||||||||||||||||||| ||||||||    
T  36660475 tttctctctcatacttacattatctttttactttctctctctattgctttggttattgtg 36660416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 371
Target Start/End: Complemental strand, 6991834 - 6991725
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatcta-attttctttgtataatttggttgtcca 360  Q
    |||||| |||||||||||||||| || |||||| || ||||||| |||||||| || |||||||  || |||  ||||||||||| ||| ||||||||      
T  6991834 attttctctctcatactcacattatt-ttttactttatctctcttttgctttggtttttgtgcatataactactttttctttgtaaaatatggttgtcat 6991736  T
Q  361 acaagttgtca 371  Q
    | |||||||||    
T  6991735 ataagttgtca 6991725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 351
Target Start/End: Complemental strand, 27854785 - 27854706
Alignment:
Q  270 tctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    ||||||||||||||| |  |||||| ||||||||  |||| ||||||| |||||| | ||| |||||||||||||| |||||    
T  27854785 tctcatactcacattatgtttttactttctctct--attgttttgatttttgtgccaatatttaattttctttgtaaaattt 27854706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 30439530 - 30439469
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||| |||||||||||||||| || |||||| || ||||||||||||||||||| | ||||||    
T  30439530 tttctctctcatactcacattatt-ttttactttatctctctattgctttgattttcgtgcaa 30439469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 34718162 - 34718219
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgt 322  Q
    |||| |||||||||||||||| || |||||| || ||||||||||||||||||| ||||    
T  34718162 tttctctctcatactcacattatt-ttttactttatctctctattgctttgatttttgt 34718219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 25830270 - 25830189
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||| |||||||  |||||| | ||  || |||||||||||    
T  25830270 tttctctctcatactcacattatatttttactttctctctctattactttgatatttgtgccaatacatacttttctttgta 25830189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 33605104 - 33605054
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttg 314  Q
    |||||| ||||||||||||||||||  ||||||  ||||||||||||||||||    
T  33605104 attttctctctcatactcacattgtgtttttac--tctctctctattgctttg 33605054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 5277730 - 5277667
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    |||||| |||||||||||||||| || |||||  || ||||||||||||||||||| | ||||||    
T  5277730 attttctctctcatactcacattatt-ttttattttatctctctattgctttgattttcgtgcaa 5277667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 9549225 - 9549166
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgt 322  Q
    |||||| |||||||||||||||| || |||||| || |||||||||||| |||||| ||||    
T  9549225 attttctctctcatactcacattatt-ttttactttatctctctattgcattgatttttgt 9549166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 10692490 - 10692550
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaacta 329  Q
    |||||||||||||||| |  |||||| |||||||||||||| |||| || |||||| ||||    
T  10692490 ctctcatactcacattatctttttactttctctctctattgttttggtttttgtgccacta 10692550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 34873889 - 34873933
Alignment:
Q  270 tctcatactcacattgttattttacgttctctctctattgctttg 314  Q
    ||||||||| ||||| || |||||| |||||||||||||||||||    
T  34873889 tctcatactaacattatttttttactttctctctctattgctttg 34873933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 39856116 - 39856164
Alignment:
Q  296 ttctctctctattgctttgattattgtgcaactatctaattttctttgt 344  Q
    |||||||||||||||||||||| |||||  | |||||| ||||||||||    
T  39856116 ttctctctctattgctttgatttttgtgtcaatatctatttttctttgt 39856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 43715921 - 43715973
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgat 316  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||| |||||||    
T  43715921 tttctctctcatactcacattatatttttactttctctctctattactttgat 43715973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 262 - 370
Target Start/End: Original strand, 1689 - 1797
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaa 361  Q
    |||||| ||||||||||| |||| | ||||||| |||||||| ||||||||||||| |||||| ||||||||| |||||||||||||||| |||||||||    
T  1689 attttctctctcatactctcattatcattttactttctctctttattgctttgatttttgtgccactatctaaatttctttgtataatttagttgtccaa 1788  T
Q  362 caagttgtc 370  Q
     | ||||||    
T  1789 aaggttgtc 1797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 17097820 - 17097718
Alignment:
Q  270 tctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgt 369  Q
    ||||||||||||||||| ||| ||| |||||| |||||| |||||||| |||||  |||| ||||||||||||||||||||| |||||||||||| ||||    
T  17097820 tctcatactcacattgtcattctactttctctttctattactttgatttttgtgtcactacctaattttctttgtataatttagttgtccaacaaattgt 17097721  T
Q  370 cac 372  Q
    |||    
T  17097720 cac 17097718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 371
Target Start/End: Original strand, 11954478 - 11954585
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||||||||||||  |||| |||||||| |||||||| |||||| ||||||||| |  ||||||||||||| |||||  || |    
T  11954478 tttctctctcatactcacattgttattttattttctttctctattactttgatttttgtgccactatctaagtcactttgtataatttagttgtataaga 11954577  T
Q  364 agttgtca 371  Q
    ||||||||    
T  11954578 agttgtca 11954585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 611911 - 612019
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| |||||||||||||||| | ||||||  ||||||||||| |||||||||| |||||  |||| |||| |||||||||||||||| |||||| || |    
T  611911 tttctctctcatactcacattatcattttattttctctctctactgctttgatttttgtgtcactacctaaatttctttgtataatttagttgtctaaaa 612010  T
Q  364 agttgtcac 372  Q
     ||||||||    
T  612011 ggttgtcac 612019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 12739851 - 12739919
Alignment:
Q  296 ttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaa 364  Q
    |||||||||||||||||||||| ||||||  ||| |||| |||||||||||||||||||||||||||||    
T  12739851 ttctctctctattgctttgatttttgtgcttctacctaaatttctttgtataatttggttgtccaacaa 12739919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 12802674 - 12802742
Alignment:
Q  296 ttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaa 364  Q
    |||||||||||||||||||||| ||||||  ||| |||| |||||||||||||||||||||||||||||    
T  12802674 ttctctctctattgctttgatttttgtgcttctacctaaatttctttgtataatttggttgtccaacaa 12802742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 21210865 - 21210973
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||| |||||| || || ||| |||||||||||||||||| ||| |||| | |||| |||| |||||||||||||| ||||||| ||| |    
T  21210865 tttctctctcatacacacattattcttctactttctctctctattgctttaatttttgtactactacctaaatttctttgtataatgtggttgttcaata 21210964  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  21210965 agttgtcac 21210973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 351
Target Start/End: Original strand, 5168234 - 5168316
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||||||||||||| |  |||||| |||||||||||||||||||||| |||||| |||| || |||||||||||| |||||    
T  5168234 ctctcatactcacattatctttttactttctctctctattgctttgatttttgtgccactacctcattttctttgtaaaattt 5168316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 31748415 - 31748491
Alignment:
Q  296 ttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    |||||| ||||||||||||||| |||||| || | |||| ||||||||||||||||| |||||||| ||||||||||    
T  31748415 ttctctatctattgctttgatttttgtgctacaacctaaatttctttgtataatttgattgtccaataagttgtcac 31748491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 42446315 - 42446207
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||| ||||||||||||  || ||| || ||||||||||||||||||| |||||| | || |||| ||||||||||| ||||||||||| || |    
T  42446315 tttctctctcttactcacattgtccttctactttttctctctattgctttgatttttgtgccattacctaaatttctttgtattatttggttgtctaata 42446216  T
Q  364 agttgtcac 372  Q
     ||||||||    
T  42446215 ggttgtcac 42446207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 39195824 - 39195899
Alignment:
Q  297 tctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    ||||||||||||||||||||| ||||   |||| |||| |||||||||||||| |||||||||||||| |||||||    
T  39195824 tctctctctattgctttgatttttgtatcactacctaaatttctttgtataatgtggttgtccaacaaattgtcac 39195899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 372
Target Start/End: Complemental strand, 32872914 - 32872814
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtca 371  Q
    |||||||||||||||| |  ||| |||| | ||||||||||||| | |||||  |||| |||| ||||||| |||| |||| ||||||||||||||||||    
T  32872914 tcatactcacattgttctcatactttctttttctattgctttgacttttgtgttactacctaaatttctttttatattttgattgtccaacaagttgtca 32872815  T
Q  372 c 372  Q
    |    
T  32872814 c 32872814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 351
Target Start/End: Complemental strand, 13089798 - 13089719
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    ||||||||||||| | ||| ||| || ||||||||||||||||||| |||||  |||| |||| ||||||||||||||||    
T  13089798 tcatactcacattatcattctactttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataattt 13089719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 371
Target Start/End: Complemental strand, 19981978 - 19981903
Alignment:
Q  296 ttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtca 371  Q
    |||||| |||||| |||||||| |||||| ||||||||| ||| ||||||||||||  ||||||||||| ||||||    
T  19981978 ttctctttctattactttgatttttgtgccactatctaaatttttttgtataatttaattgtccaacaaattgtca 19981903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 371
Target Start/End: Original strand, 29463047 - 29463149
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaat-tttctttgtataatttggttgtccaacaagtt 367  Q
    |||||||||||||||| |  |||||  |||||||||||||||||||||| |||||| | || || || |||||||||||| || |||||||| |||||||    
T  29463047 ctctcatactcacattttgtttttattttctctctctattgctttgatttttgtgccaata-ctcatatttctttgtatatttaggttgtcccacaagtt 29463145  T
Q  368 gtca 371  Q
    ||||    
T  29463146 gtca 29463149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 26791269 - 26791160
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| ||||||| |||||||| |  |||||| ||||||||||||||||||| || |||||| |||| || |||| ||||||| || ||||||||||  |     
T  26791269 tttctctctcatgctcacattatctttttactttctctctctattgctttggtttttgtgccactaactcatttcctttgtaaaattttggttgtcacaa 26791170  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  26791169 aagttgtcac 26791160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 33037566 - 33037675
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| |||||||||||||||| |  |||||| || ||||||||||||||||||| |||||  |||| || |||| ||||||| || ||||||||||  |     
T  33037566 tttctctctcatactcacattatctttttactttttctctctattgctttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaa 33037665  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  33037666 aagttgtcac 33037675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 372
Target Start/End: Complemental strand, 28306152 - 28306048
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaacaagtt 367  Q
    |||||||||||||||| |  | |||| ||||||||||||||||||| |  |||||| |||| || |||||||||||| || ||||||||||  | |||||    
T  28306152 ctctcatactcacattatcttcttactttctctctctattgctttggtctttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagtt 28306053  T
Q  368 gtcac 372  Q
    |||||    
T  28306052 gtcac 28306048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 7076595 - 7076484
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtcca 360  Q
    |||||| |||||||||||| ||| || |||||| ||||||||||||||||||| || |||||| | ||  | |||| ||||||| || ||||||||||      
T  7076595 attttctctctcatactcatattatttttttactttctctctctattgctttggtttttgtgccattacttcatttcctttgtaaaattttggttgtcac 7076496  T
Q  361 acaagttgtcac 372  Q
    | ||||||||||    
T  7076495 aaaagttgtcac 7076484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 35646429 - 35646516
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||| |||||||||||||||| || |||||| |||||||| |||||||||| || |||||  |||| || |||| ||||||| |||||    
T  35646429 tttctctctcatactcacattatttttttactttctctctatattgctttggtttttgtgtcactacctcatttcctttgtaaaattt 35646516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 39054645 - 39054712
Alignment:
Q  276 actcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttg 343  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||||| ||| | ||||||||||    
T  39054645 actcacattatgtttttactttctctctctattgctttgatttttgtgcaaatatatcattttctttg 39054712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 372
Target Start/End: Complemental strand, 7287206 - 7287105
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaacaagttgtc 370  Q
    ||||||||||||| |  |||||| |||||||||||||| |||| || |||||  |||| || |||||||||||| || ||||||||||  | ||||||||    
T  7287206 tcatactcacattatatttttactttctctctctattgttttggtttttgtgtcactacctcattttctttgtaaaattttggttgtcacaaaagttgtc 7287107  T
Q  371 ac 372  Q
    ||    
T  7287106 ac 7287105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 351
Target Start/End: Original strand, 27487959 - 27488020
Alignment:
Q  290 tttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    ||||| ||||||||||||||||||| || |||||| | ||| |||||||||||||| |||||    
T  27487959 tttactttctctctctattgctttggtttttgtgccaatatttaattttctttgtaaaattt 27488020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 370
Target Start/End: Complemental strand, 36563052 - 36562971
Alignment:
Q  289 ttttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtc 370  Q
    |||||| ||||||||||||||||| | || |||||  | || || | ||||||||| || ||||||||||||||||||||||    
T  36563052 ttttactttctctctctattgcttaggtttttgtgtcaataccttaatttctttgtgtagtttggttgtccaacaagttgtc 36562971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 38493671 - 38493724
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgatt 317  Q
    |||| |||||||||||||||| | ||||||| || |||||||||||||||||||    
T  38493671 tttctctctcatactcacattataattttactttatctctctattgctttgatt 38493724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 4719702 - 4719757
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||||||||||||||| |  |||||| || ||||||||||||||||||| ||||||    
T  4719702 ctctcatactcacattatgtttttactttttctctctattgctttgatttttgtgc 4719757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 372
Target Start/End: Complemental strand, 16972119 - 16972016
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    |||||||| | |||||||| || ||| ||||||||||||| |||||||| |||||  | | ||||| |  |||||||||||||| ||||  || ||||||    
T  16972119 ctctcatatttacattgttcttctactttctctctctattactttgatttttgtgtcagtctctaaatccctttgtataatttgattgtataagaagttg 16972020  T
Q  369 tcac 372  Q
    ||||    
T  16972019 tcac 16972016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 19522020 - 19521969
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    ||||||||||||| |  |||||| |||||||||||||||||||||| |||||    
T  19522020 tcatactcacattatctttttactttctctctctattgctttgatttttgtg 19521969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 36738994 - 36739053
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtg 323  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||||||||| || |||||    
T  36738994 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtg 36739053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 371
Target Start/End: Complemental strand, 8675459 - 8675350
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatcta-attttctttgtataatttggttgtcca 360  Q
    |||||| ||||||||||||||||  | |||||| || ||||||||||||||||||| | |||||| || | |  ||||||||||| | | |||||||||     
T  8675459 attttctctctcatactcacattact-ttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtccc 8675361  T
Q  361 acaagttgtca 371  Q
    | |||||||||    
T  8675360 aaaagttgtca 8675350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 14051315 - 14051253
Alignment:
Q  289 ttttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||| |||||||||||||| |||| || |||||| |||| || |||||||||||| |||||    
T  14051315 ttttactttctctctctattgttttggtttttgtgccactacctcattttctttgtaaaattt 14051253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 18660803 - 18660865
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||||| ||||||||||||| || |  |||||| ||||||||||||||||||| || ||||||    
T  18660803 attttctctctcatactcacgttatctttttactttctctctctattgctttggtttttgtgc 18660865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 370
Target Start/End: Complemental strand, 35075595 - 35075496
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttg 368  Q
    |||||||||||||||| |  |||||  || ||||||||||||||||||| |||| | | ||||||| ||| ||||||||   |||||||| || ||||||    
T  35075595 ctctcatactcacattatattttta--ttttctctctattgctttgatttttgtaccaatatctaaatttgtttgtatatgatggttgtctaagaagttg 35075498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 1764270 - 1764379
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| |||||||||||||||| |  |||||| |||||||| |||||||||| || || ||| |||| || |||| |||| || || ||||||||||  |     
T  1764270 tttctctctcatactcacattttctttttactttctctctttattgctttggtttttatgccactacctcatttcctttctaaaattttggttgtcacaa 1764369  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  1764370 aagttgtcac 1764379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 20770178 - 20770230
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgatt 317  Q
    |||| |||||||||||||||| || |||||| || |||||||||||||||||||    
T  20770178 tttctctctcatactcacattatt-ttttactttatctctctattgctttgatt 20770230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 22098302 - 22098383
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    |||| |||||||||||||||| |  |||||| ||||||||||||| |||||||  |||||| | ||  || |||||||||||    
T  22098302 tttctctctcatactcacattatatttttactttctctctctattactttgatatttgtgccaatacatacttttctttgta 22098383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 33958276 - 33958203
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgta 345  Q
    ||||||||||||| |  |||||| ||||||||||||||||||| || |||||  | |||||  |||||||||||    
T  33958276 tcatactcacattatatttttactttctctctctattgctttggtttttgtgtcaatatctctttttctttgta 33958203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 39195764 - 39195817
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgatt 317  Q
    |||| |||||||||  |||||||| || ||| ||||||||||||||||||||||    
T  39195764 tttctctctcatacagacattgttcttctactttctctctctattgctttgatt 39195817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 40364615 - 40364675
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgc 324  Q
    |||| |||||||||||||||| |  || ||| ||||||||||||| |||||||| ||||||    
T  40364615 tttctctctcatactcacattatatttctactttctctctctattactttgatttttgtgc 40364675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 41175730 - 41175679
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgat 316  Q
    |||| |||||||||||||||| || |||||| || ||||||||||||||||||    
T  41175730 tttctctctcatactcacattatt-ttttactttatctctctattgctttgat 41175679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 43196643 - 43196588
Alignment:
Q  270 tctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaa 326  Q
    ||||||||||||||| || |||||| || ||||||||||||||||||| | ||||||    
T  43196643 tctcatactcacattatt-ttttactttatctctctattgctttgattttcgtgcaa 43196588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 358
Target Start/End: Original strand, 10983 - 11075
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtc 358  Q
    |||| |||||||||||||||| | |||||||  ||||||||||||||||||||| |||||| |||| |||| |||||||||||||||| ||||||    
T  10983 tttctctctcatactcacattatcattttac--tctctctctattgctttgatttttgtgccactaactaaatttctttgtataatttagttgtc 11075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 8519 - 8627
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||||||||||||  || ||| |||||| ||||||||||||||| |||||  || | |||| ||||||| |||||||| |||||| ||||    
T  8519 tttctctctcatactcacattgtccttctactttctctttctattgctttgatttttgtgtcaccaactaaatttctttatataatttagttgtctaaca 8618  T
Q  364 agttgtcac 372  Q
    |||||||||    
T  8619 agttgtcac 8627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 357
Target Start/End: Complemental strand, 6539 - 6451
Alignment:
Q  269 ctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgt 357  Q
    ||||||||||||||||||| || ||| ||||||||||||| |||||||| |||||  ||||||||| |  ||||||||| |||||||||    
T  6539 ctctcatactcacattgttcttctactttctctctctattactttgatttttgtgtcactatctaaatccctttgtatagtttggttgt 6451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 371
Target Start/End: Complemental strand, 28351 - 28244
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaaca 363  Q
    |||| ||||||||| ||||||||| || ||| ||||||||||||| |||||||| || ||| ||||| ||| ||||| | |||||  |||||||| ||||    
T  28351 tttctctctcatacacacattgttcttctactttctctctctattactttgatttttatgccactatataaatttctatatataacgtggttgtctaaca 28252  T
Q  364 agttgtca 371  Q
    ||||||||    
T  28251 agttgtca 28244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 101891 - 101817
Alignment:
Q  297 tctctctctattgctttgattattgtgcaactatctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    ||||||||||||||||||||| || ||  |||| |||| |||||||||||||||||||||| ||||||||||||||    
T  101891 tctctctctattgctttgatttttatgtcactacctaaatttctttgtataatttggttgt-caacaagttgtcac 101817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 76644 - 76535
Alignment:
Q  264 tttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaac 362  Q
    |||| ||||||||| |||||| |  ||| || ||||||||||||||||||| || |||||| |||| || |||| ||||||| || ||||||||||  |     
T  76644 tttctctctcatacccacattatcttttcactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaa 76545  T
Q  363 aagttgtcac 372  Q
    ||||||||||    
T  76544 aagttgtcac 76535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 13514 - 13473
Alignment:
Q  331 ctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    |||| |||||||||||||||| ||||||||| ||||||||||    
T  13514 ctaaatttctttgtataatttagttgtccaataagttgtcac 13473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 372
Target Start/End: Original strand, 59330 - 59371
Alignment:
Q  331 ctaattttctttgtataatttggttgtccaacaagttgtcac 372  Q
    |||| |||||||||||||||| ||||||||| ||||||||||    
T  59330 ctaaatttctttgtataatttagttgtccaataagttgtcac 59371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 351
Target Start/End: Complemental strand, 10990 - 10901
Alignment:
Q  262 attttccctctcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataattt 351  Q
    |||||| | |||||||||||||| |  |||||| |||||||||||||  ||||||| |||||  |||| || ||||||||| || |||||    
T  10990 attttctccctcatactcacattatctttttactttctctctctattattttgatttttgtgttactacctcattttctttataaaattt 10901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 371
Target Start/End: Original strand, 8722 - 8822
Alignment:
Q  272 tcatactcacattgttattttacgttctctctctattgctttgattattgtgcaactatctaattttctttgtataa-tttggttgtccaacaagttgtc 370  Q
    ||||||||| ||| |  ||||||||||||||||| |||||||| || |||||  |||| || |||| ||||||| || ||||||||||  | ||||||||    
T  8722 tcatactcatattatctttttacgttctctctctgttgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcataaaagttgtc 8821  T
Q  371 a 371  Q
    |    
T  8822 a 8822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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