View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18349_low_17 (Length: 216)
Name: NF18349_low_17
Description: NF18349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18349_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 30757221 - 30757023
Alignment:
| Q |
1 |
atacaattgaggaacattggttagccataatgagcgccacacatatgttttagagctggtttctcattaaactgaagcagaaggtgatgaaacttctttt |
100 |
Q |
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| T |
30757221 |
atacaattgaggaacattggttagccataatgagcgccacacatatgttttagagctggtttctcattaaactgaagcagaaggtgatgaaacttctttt |
30757122 |
T |
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| Q |
101 |
atttttgttgtttctaaaagtcgaaagaagaaaaataatcgcgaagcatatccaaccccgctcaaagggttcacgttcaccatcatctattcgccaatg |
199 |
Q |
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| T |
30757121 |
atttttgttgtttctaaaagtcgaaagaagaaaaataatcgcgaagcatatccaaccccgctcaaagggttcacgttcaccatcatctattcgccaatg |
30757023 |
T |
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