View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1834_high_22 (Length: 233)
Name: NF1834_high_22
Description: NF1834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1834_high_22 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 48448920 - 48449129
Alignment:
| Q |
5 |
ttacactgtgtggtagaatttaatactagtgcttttgaaattggaacaagtcttttttccttcctaacatatcggtttaaagttagatctcttaaatatg |
104 |
Q |
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| T |
48448920 |
ttacactgtttggtagaatttaatactagtgcttttgaaattggaacaagtcttttttccttcctaacatatcggtttaaagttagatctcttaaatatg |
48449019 |
T |
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| Q |
105 |
cgacaattccgagaaaaataatgcacaaccttagacgtaacctctactaactaaatttaatgaaggaacaaagaatgtgacatgtttttcctcctctttg |
204 |
Q |
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| T |
48449020 |
cgacaattccgagaaaaataatgcacaaccttagacgtaacctctactaactaaatttaatgaaggaacaaagaatgtgacatgtttttcctcctctttg |
48449119 |
T |
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| Q |
205 |
atagatcgat |
214 |
Q |
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|||||||||| |
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| T |
48449120 |
atagatcgat |
48449129 |
T |
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