View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18351_low_6 (Length: 333)
Name: NF18351_low_6
Description: NF18351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18351_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 38084387 - 38084613
Alignment:
| Q |
1 |
caaaactcttctattgctctctgaatccatcatcatcatttcaggatctgtcaaacactctccaatggttttggtacaaaccctctttgtgattactact |
100 |
Q |
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| T |
38084387 |
caaaactcttctattgctctctgaatccatcatcatcatttcaggatctgtcaaacactctccaatggttttggtacaaaccctctttgtgattactact |
38084486 |
T |
|
| Q |
101 |
gcatcatttatttcactgtgtttcaacagattgaggtcaacagtagttggtaaaagggaagtgcagattggaagataggtgtgaaagagaagtgttagaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
38084487 |
gcatcatttatttcactgtgtttcaacagattgaggtcaacagtagttggtaagagggaagtgcagattggaagataggcgtgaaagagaagtgttagaa |
38084586 |
T |
|
| Q |
201 |
agaggaagatggtggaagtgaatctga |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
38084587 |
agaggaagatggtggaagtgaatctga |
38084613 |
T |
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