View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18352_low_18 (Length: 236)
Name: NF18352_low_18
Description: NF18352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18352_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 21732057 - 21731837
Alignment:
| Q |
1 |
tcttttcacacaagtttctcttacctatatcactttacacctcttctccctttgtatttctctcttttattctccgtcacatttcctgttttatctccct |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
21732057 |
tcttttcacacaagtttctcttacctatatcactttacacctcttctccctttgtatttctctcttttattctccgtcacatttcctattttatctccct |
21731958 |
T |
|
| Q |
101 |
gacctaaatctctcgccgagtgttgccaaatagcggctatggtctatggcagtgctacagtgtagcggaatttgaagaaactgttattgttctacgatag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
21731957 |
gacctaaatctctcgccgagtgttgccaaatagcggctatggtctatggcagtgctacagtgtagtggaatttgaagaaactgttattgttctacgatag |
21731858 |
T |
|
| Q |
201 |
tataaactatttagtacaaag |
221 |
Q |
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||||||||||||||||||||| |
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| T |
21731857 |
tataaactatttagtacaaag |
21731837 |
T |
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