View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18353_low_4 (Length: 491)

Name: NF18353_low_4
Description: NF18353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18353_low_4
NF18353_low_4
[»] chr1 (72 HSPs)
chr1 (158-338)||(4692304-4692485)
chr1 (157-340)||(50526341-50526525)
chr1 (158-340)||(9347128-9347312)
chr1 (158-341)||(50615489-50615672)
chr1 (158-341)||(50623317-50623500)
chr1 (158-340)||(9347419-9347602)
chr1 (159-341)||(28634024-28634208)
chr1 (159-341)||(48104681-48104864)
chr1 (159-338)||(42611188-42611370)
chr1 (159-339)||(42611483-42611665)
chr1 (159-339)||(50429950-50430132)
chr1 (158-340)||(21687027-21687211)
chr1 (158-339)||(6703764-6703946)
chr1 (158-282)||(26814696-26814822)
chr1 (159-340)||(999115-999295)
chr1 (158-282)||(20480170-20480295)
chr1 (158-340)||(999392-999576)
chr1 (158-340)||(32162919-32163095)
chr1 (158-339)||(46824148-46824330)
chr1 (159-341)||(46823846-46824021)
chr1 (158-340)||(49317754-49317936)
chr1 (158-340)||(49318035-49318217)
chr1 (158-341)||(27172118-27172298)
chr1 (174-340)||(50949434-50949599)
chr1 (158-267)||(13918448-13918559)
chr1 (158-341)||(20371042-20371221)
chr1 (158-274)||(48105050-48105168)
chr1 (158-340)||(28633722-28633898)
chr1 (158-341)||(6703462-6703637)
chr1 (158-274)||(26815053-26815171)
chr1 (174-340)||(44911045-44911210)
chr1 (158-282)||(13918793-13918919)
chr1 (158-280)||(20371280-20371404)
chr1 (158-280)||(20480542-20480663)
chr1 (159-340)||(44911306-44911488)
chr1 (158-340)||(49318314-49318494)
chr1 (158-340)||(4692024-4692205)
chr1 (158-327)||(21687348-21687518)
chr1 (158-339)||(50429658-50429841)
chr1 (158-282)||(27172468-27172593)
chr1 (161-280)||(32162734-32162849)
chr1 (159-340)||(44223988-44224169)
chr1 (158-282)||(47498303-47498427)
chr1 (158-268)||(39691940-39692052)
chr1 (158-266)||(19008692-19008802)
chr1 (247-340)||(50615290-50615382)
chr1 (247-340)||(50623118-50623210)
chr1 (362-421)||(19007893-19007952)
chr1 (157-228)||(6002874-6002947)
chr1 (436-474)||(19008010-19008048)
chr1 (158-228)||(6002239-6002311)
chr1 (158-210)||(47498493-47498546)
chr1 (158-228)||(49284411-49284483)
chr1 (215-267)||(44223745-44223797)
chr1 (303-340)||(26814834-26814871)
chr1 (303-340)||(26814997-26815034)
chr1 (175-228)||(50949182-50949235)
chr1 (158-203)||(50615242-50615289)
chr1 (158-203)||(50623070-50623117)
chr1 (158-216)||(19007737-19007796)
chr1 (155-208)||(17518602-17518656)
chr1 (303-341)||(48104991-48105029)
chr1 (182-228)||(49285035-49285081)
chr1 (303-341)||(50949289-50949327)
chr1 (199-228)||(6712215-6712244)
chr1 (303-340)||(13918742-13918779)
chr1 (159-208)||(8108724-8108775)
chr1 (356-392)||(21687227-21687263)
chr1 (356-392)||(21687287-21687323)
chr1 (356-392)||(44223937-44223973)
chr1 (356-392)||(50429897-50429933)
chr1 (356-392)||(50949343-50949379)
[»] chr4 (51 HSPs)
chr4 (158-340)||(28196641-28196825)
chr4 (158-340)||(9380309-9380492)
chr4 (158-339)||(169015-169199)
chr4 (174-340)||(169308-169473)
chr4 (158-341)||(39744332-39744517)
chr4 (158-340)||(32703518-32703702)
chr4 (158-282)||(43292039-43292165)
chr4 (158-340)||(48405964-48406147)
chr4 (158-340)||(23539843-23540024)
chr4 (158-294)||(4239280-4239418)
chr4 (174-340)||(25162182-25162347)
chr4 (158-341)||(28196348-28196532)
chr4 (158-340)||(23540121-23540304)
chr4 (158-274)||(293151-293269)
chr4 (150-339)||(39086491-39086683)
chr4 (158-340)||(9023246-9023429)
chr4 (158-340)||(9023556-9023732)
chr4 (158-282)||(9380667-9380793)
chr4 (158-282)||(25161880-25162006)
chr4 (158-392)||(292784-293019)
chr4 (174-280)||(48406313-48406419)
chr4 (158-341)||(26207363-26207546)
chr4 (158-331)||(32703227-32703401)
chr4 (158-282)||(39744032-39744158)
chr4 (176-339)||(12757788-12757951)
chr4 (174-340)||(43292228-43292391)
chr4 (174-294)||(26207660-26207780)
chr4 (174-282)||(44468850-44468957)
chr4 (176-340)||(39912356-39912519)
chr4 (159-282)||(12758130-12758254)
chr4 (158-268)||(39912056-39912166)
chr4 (159-260)||(36096423-36096526)
chr4 (182-260)||(36095845-36095922)
chr4 (158-228)||(50678781-50678853)
chr4 (303-341)||(12758079-12758117)
chr4 (158-228)||(50679404-50679476)
chr4 (159-228)||(43050610-43050681)
chr4 (158-210)||(24775781-24775835)
chr4 (158-218)||(56505695-56505757)
chr4 (303-341)||(39912192-39912230)
chr4 (182-228)||(43051232-43051278)
chr4 (182-228)||(45830176-45830222)
chr4 (303-340)||(25162019-25162056)
chr4 (303-340)||(39744170-39744207)
chr4 (356-392)||(169255-169291)
chr4 (356-392)||(9023445-9023481)
chr4 (356-392)||(12757968-12758004)
chr4 (356-392)||(28196549-28196585)
chr4 (356-392)||(32703426-32703462)
chr4 (356-392)||(39912305-39912341)
chr4 (356-392)||(43292176-43292212)
[»] chr7 (43 HSPs)
chr7 (152-340)||(9035160-9035351)
chr7 (158-340)||(20419192-20419376)
chr7 (159-341)||(36527387-36527569)
chr7 (158-340)||(3204962-3205145)
chr7 (158-340)||(17156969-17157152)
chr7 (148-340)||(48359312-48359503)
chr7 (158-339)||(3204671-3204851)
chr7 (158-339)||(37889128-37889311)
chr7 (158-340)||(10533036-10533219)
chr7 (159-341)||(18863970-18864153)
chr7 (158-339)||(37888835-37889019)
chr7 (158-282)||(22740158-22740284)
chr7 (159-392)||(22740409-22740641)
chr7 (158-294)||(13744147-13744284)
chr7 (158-340)||(37972265-37972448)
chr7 (158-281)||(37971962-37972087)
chr7 (159-282)||(20418891-20419016)
chr7 (174-340)||(38826780-38826947)
chr7 (174-341)||(42418611-42418778)
chr7 (16-129)||(23950240-23950354)
chr7 (158-341)||(29292924-29293108)
chr7 (158-340)||(18864279-18864453)
chr7 (174-341)||(29293214-29293380)
chr7 (159-340)||(42418904-42419079)
chr7 (174-341)||(13741577-13741742)
chr7 (158-340)||(9034869-9035053)
chr7 (160-266)||(48359600-48359707)
chr7 (177-282)||(36527724-36527829)
chr7 (158-218)||(16198967-16199029)
chr7 (158-228)||(44599491-44599563)
chr7 (158-228)||(44600115-44600187)
chr7 (158-228)||(46816291-46816363)
chr7 (182-228)||(13863341-13863387)
chr7 (158-228)||(8643746-8643818)
chr7 (158-228)||(13863937-13864008)
chr7 (158-210)||(18925320-18925372)
chr7 (303-339)||(36527678-36527714)
chr7 (153-210)||(5349731-5349787)
chr7 (303-340)||(20419029-20419066)
chr7 (303-340)||(37972100-37972137)
chr7 (356-392)||(9035069-9035105)
chr7 (356-392)||(20419141-20419177)
chr7 (356-392)||(37889076-37889112)
[»] chr3 (51 HSPs)
chr3 (155-340)||(22429465-22429650)
chr3 (158-340)||(53687890-53688072)
chr3 (158-340)||(36180558-36180739)
chr3 (158-341)||(3353130-3353311)
chr3 (174-340)||(48160202-48160367)
chr3 (158-340)||(40848830-40849013)
chr3 (158-339)||(42673173-42673347)
chr3 (175-340)||(27238486-27238650)
chr3 (175-341)||(24485042-24485199)
chr3 (158-341)||(53688171-53688354)
chr3 (159-282)||(27238826-27238951)
chr3 (174-339)||(3353420-3353585)
chr3 (158-281)||(40848523-40848647)
chr3 (158-341)||(42672980-42673163)
chr3 (158-340)||(47665913-47666096)
chr3 (153-338)||(47666206-47666392)
chr3 (174-341)||(26007201-26007367)
chr3 (158-340)||(44007969-44008152)
chr3 (158-340)||(48159899-48160076)
chr3 (158-282)||(10348725-10348851)
chr3 (158-339)||(10348481-10348664)
chr3 (158-275)||(24485393-24485511)
chr3 (158-282)||(36180916-36181042)
chr3 (159-282)||(53766166-53766290)
chr3 (158-340)||(22429160-22429336)
chr3 (158-282)||(42456122-42456245)
chr3 (159-282)||(26007545-26007670)
chr3 (153-268)||(21896451-21896567)
chr3 (158-268)||(44008341-44008452)
chr3 (158-265)||(8314015-8314124)
chr3 (242-339)||(53766461-53766557)
chr3 (158-217)||(42455792-42455853)
chr3 (237-282)||(42455852-42455897)
chr3 (173-223)||(1928419-1928469)
chr3 (303-341)||(27238776-27238814)
chr3 (303-340)||(26007496-26007533)
chr3 (303-340)||(40848664-40848701)
chr3 (158-218)||(53766569-53766631)
chr3 (158-207)||(8315083-8315133)
chr3 (153-208)||(10293605-10293662)
chr3 (303-341)||(10348674-10348712)
chr3 (158-208)||(17372594-17372644)
chr3 (358-392)||(22429412-22429446)
chr3 (303-341)||(24485324-24485362)
chr3 (306-340)||(42456070-42456104)
chr3 (306-340)||(53766303-53766337)
chr3 (158-218)||(28702280-28702341)
chr3 (242-293)||(21895717-21895769)
chr3 (356-423)||(21896298-21896365)
chr3 (356-392)||(26007381-26007417)
chr3 (356-392)||(36180755-36180791)
[»] chr2 (42 HSPs)
chr2 (159-340)||(8851151-8851333)
chr2 (159-341)||(26692688-26692871)
chr2 (158-282)||(7664599-7664725)
chr2 (159-339)||(19141719-19141898)
chr2 (159-294)||(26692399-26692536)
chr2 (158-340)||(8851460-8851634)
chr2 (158-340)||(17851273-17851454)
chr2 (158-274)||(7979937-7980054)
chr2 (162-337)||(7979573-7979748)
chr2 (158-340)||(16910829-16911014)
chr2 (158-274)||(7664250-7664368)
chr2 (174-340)||(41790510-41790675)
chr2 (158-267)||(16911210-16911320)
chr2 (158-341)||(41790780-41790964)
chr2 (159-341)||(18749729-18749913)
chr2 (174-282)||(6324937-6325045)
chr2 (159-275)||(5793450-5793568)
chr2 (156-268)||(6325287-6325401)
chr2 (158-274)||(17850980-17851097)
chr2 (158-340)||(18750009-18750177)
chr2 (158-259)||(37720206-37720307)
chr2 (156-340)||(19141444-19141620)
chr2 (158-268)||(5378663-5378775)
chr2 (158-268)||(5379899-5380011)
chr2 (153-228)||(38490821-38490897)
chr2 (182-228)||(2638848-2638894)
chr2 (182-228)||(7591830-7591876)
chr2 (158-228)||(2639462-2639534)
chr2 (158-228)||(26841589-26841661)
chr2 (182-228)||(7591229-7591275)
chr2 (159-210)||(18055314-18055367)
chr2 (182-228)||(18296104-18296150)
chr2 (182-228)||(26842218-26842264)
chr2 (303-340)||(7664387-7664424)
chr2 (303-340)||(7664550-7664587)
chr2 (159-208)||(32673143-32673193)
chr2 (307-341)||(37720305-37720339)
chr2 (303-340)||(7979881-7979918)
chr2 (303-339)||(6325217-6325253)
chr2 (156-204)||(15321392-15321440)
chr2 (356-392)||(16911030-16911066)
chr2 (356-392)||(17851170-17851206)
[»] chr5 (46 HSPs)
chr5 (174-341)||(19514546-19514713)
chr5 (159-337)||(2817152-2817331)
chr5 (174-340)||(3888259-3888424)
chr5 (158-340)||(34147143-34147325)
chr5 (158-340)||(22729309-22729491)
chr5 (158-341)||(12498793-12498980)
chr5 (158-340)||(26571034-26571216)
chr5 (158-282)||(43464118-43464243)
chr5 (158-341)||(34147380-34147562)
chr5 (159-341)||(41072082-41072264)
chr5 (158-324)||(12498569-12498736)
chr5 (174-281)||(26570749-26570856)
chr5 (159-288)||(10098861-10098991)
chr5 (159-282)||(21207229-21207354)
chr5 (158-282)||(19514889-19515015)
chr5 (158-273)||(25940523-25940640)
chr5 (158-282)||(22729010-22729134)
chr5 (159-341)||(3888530-3888713)
chr5 (159-262)||(43463759-43463863)
chr5 (155-337)||(2817448-2817629)
chr5 (159-282)||(11316900-11317025)
chr5 (158-340)||(10098521-10098690)
chr5 (174-282)||(37610545-37610652)
chr5 (158-265)||(25940956-25941066)
chr5 (158-340)||(37780322-37780495)
chr5 (174-339)||(37780623-37780776)
chr5 (158-341)||(37610204-37610377)
chr5 (159-341)||(30401885-30402063)
chr5 (158-266)||(42919307-42919416)
chr5 (182-228)||(11351407-11351453)
chr5 (182-260)||(18816980-18817058)
chr5 (158-228)||(18817591-18817663)
chr5 (218-340)||(25940833-25940955)
chr5 (159-228)||(31569910-31569980)
chr5 (159-252)||(11316717-11316812)
chr5 (356-392)||(26570983-26571019)
chr5 (303-339)||(43464070-43464106)
chr5 (182-228)||(11350836-11350881)
chr5 (303-337)||(37610500-37610534)
chr5 (303-337)||(43463904-43463938)
chr5 (303-340)||(21207367-21207404)
chr5 (159-207)||(23011383-23011432)
chr5 (158-208)||(33324838-33324890)
chr5 (356-392)||(10098767-10098803)
chr5 (356-392)||(21207479-21207515)
chr5 (356-392)||(43463959-43463995)
[»] chr6 (26 HSPs)
chr6 (158-339)||(7654418-7654600)
chr6 (174-340)||(33974167-33974333)
chr6 (158-340)||(22754959-22755141)
chr6 (152-340)||(10087728-10087916)
chr6 (158-340)||(2354411-2354593)
chr6 (158-274)||(22684292-22684409)
chr6 (158-274)||(22754659-22754776)
chr6 (174-336)||(29074245-29074406)
chr6 (174-336)||(29079009-29079170)
chr6 (174-336)||(29106818-29106979)
chr6 (159-341)||(32733864-32734047)
chr6 (176-282)||(32733579-32733685)
chr6 (169-341)||(13176634-13176805)
chr6 (158-280)||(13176984-13177107)
chr6 (158-329)||(2354691-2354862)
chr6 (175-282)||(33973885-33973990)
chr6 (158-228)||(33828992-33829064)
chr6 (158-228)||(33829616-33829688)
chr6 (157-217)||(403650-403711)
chr6 (158-208)||(13579651-13579702)
chr6 (303-340)||(22684234-22684271)
chr6 (303-340)||(22754797-22754834)
chr6 (356-392)||(22684124-22684160)
chr6 (356-392)||(22754908-22754944)
chr6 (304-340)||(32733698-32733734)
chr6 (303-339)||(33974002-33974038)
[»] chr8 (49 HSPs)
chr8 (158-341)||(6198963-6199148)
chr8 (158-338)||(24473639-24473820)
chr8 (159-340)||(34498125-34498297)
chr8 (158-340)||(41662523-41662707)
chr8 (158-339)||(37396710-37396896)
chr8 (158-341)||(24473345-24473529)
chr8 (158-341)||(34498423-34498607)
chr8 (158-282)||(17431289-17431415)
chr8 (158-282)||(20861564-20861690)
chr8 (158-340)||(16169476-16169659)
chr8 (159-282)||(25439053-25439176)
chr8 (158-341)||(9623504-9623688)
chr8 (158-282)||(37397071-37397197)
chr8 (159-282)||(15444573-15444698)
chr8 (177-340)||(33726980-33727136)
chr8 (187-282)||(6198691-6198786)
chr8 (158-341)||(15444213-15444397)
chr8 (158-268)||(16169176-16169287)
chr8 (155-218)||(25438791-25438856)
chr8 (158-260)||(9822750-9822854)
chr8 (173-260)||(2856545-2856632)
chr8 (158-228)||(13936725-13936796)
chr8 (158-228)||(9823341-9823413)
chr8 (158-228)||(22851392-22851464)
chr8 (223-341)||(33726734-33726851)
chr8 (158-228)||(39724028-39724100)
chr8 (159-228)||(13027261-13027332)
chr8 (182-228)||(3307366-3307412)
chr8 (158-208)||(18020088-18020138)
chr8 (158-208)||(34313767-34313817)
chr8 (159-208)||(9465874-9465923)
chr8 (158-228)||(13026637-13026709)
chr8 (158-228)||(13937369-13937441)
chr8 (362-427)||(15043572-15043636)
chr8 (303-340)||(37397022-37397059)
chr8 (158-218)||(6092779-6092839)
chr8 (155-216)||(33726693-33726756)
chr8 (303-338)||(6198799-6198834)
chr8 (153-224)||(9623864-9623938)
chr8 (156-268)||(15442763-15442877)
chr8 (303-341)||(9623815-9623853)
chr8 (182-228)||(39723430-39723476)
chr8 (159-205)||(43597803-43597849)
chr8 (158-208)||(15156185-15156237)
chr8 (158-206)||(43162236-43162285)
chr8 (155-208)||(765733-765788)
chr8 (356-392)||(6198910-6198946)
chr8 (303-339)||(16169314-16169350)
chr8 (356-392)||(24473584-24473620)
[»] scaffold0029 (3 HSPs)
scaffold0029 (158-340)||(9907-10091)
scaffold0029 (237-341)||(10216-10319)
scaffold0029 (158-216)||(10311-10369)
[»] scaffold0017 (2 HSPs)
scaffold0017 (158-282)||(185200-185326)
scaffold0017 (158-282)||(184841-184967)
[»] scaffold0069 (2 HSPs)
scaffold0069 (158-340)||(50077-50255)
scaffold0069 (158-280)||(50434-50558)
[»] scaffold0460 (3 HSPs)
scaffold0460 (158-337)||(332-512)
scaffold0460 (158-280)||(693-814)
scaffold0460 (356-392)||(531-567)
[»] scaffold0176 (2 HSPs)
scaffold0176 (158-280)||(19623-19746)
scaffold0176 (158-340)||(19912-20095)
[»] scaffold0041 (2 HSPs)
scaffold0041 (158-340)||(38564-38747)
scaffold0041 (186-339)||(38283-38435)
[»] scaffold0328 (2 HSPs)
scaffold0328 (182-228)||(6775-6821)
scaffold0328 (188-228)||(6186-6226)
[»] scaffold1221 (1 HSPs)
scaffold1221 (158-210)||(1513-1566)
[»] scaffold0802 (2 HSPs)
scaffold0802 (158-208)||(1120-1172)
scaffold0802 (158-208)||(1420-1472)


Alignment Details
Target: chr1 (Bit Score: 102; Significance: 2e-50; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 158 - 338
Target Start/End: Complemental strand, 4692485 - 4692304
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||||||| | | || |||||||||||||||||||    
T  4692485 cttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttacctcctatagtttttcccctttct 4692386  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttt 338  Q
    ||||||||||||| |||||| ||||||  |||||||||||       |||||||||| |||||||||||||||||||||||||    
T  4692385 gattttatggtccccatgacatttagtgctgatgtgtcta-ttttttatcaattaatgtgtgccacgtgtgtaattccatttt 4692304  T

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Target: chr1; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 157 - 340
Target Start/End: Complemental strand, 50526525 - 50526341
Alignment:
Q  157 acttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttc 254  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||||    
T  50526525 acttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 50526426  T
Q  255 tgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||||||||||| |||| |  ||||||||||        |||||||||| |||||||||||||||||| ||||||||    
T  50526425 tgattttatggtccacatgacatttaatgctgatgtgtct-gttttttatcaattaatgtgtgccacgtgtgtaatttcatttttt 50526341  T

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Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 9347128 - 9347312
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  9347128 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 9347227  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| |||||   ||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  9347228 gattttatggtccgcatgacatttagcgctgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 9347312  T

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Target: chr1; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 158 - 341
Target Start/End: Complemental strand, 50615672 - 50615489
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||  | ||||||||| ||||||||||    
T  50615672 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttctg 50615573  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||||| |||||| ||||||  ||||| ||||        |||||||||| ||||||||||||||||||||||||||||    
T  50615572 attttatggtccccatgacatttagtgctgatgcgtct-gttttttatcaattaatgtgtgccacgtgtgtaattccattttttt 50615489  T

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Target: chr1; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 158 - 341
Target Start/End: Complemental strand, 50623500 - 50623317
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||  | ||||||||| ||||||||||    
T  50623500 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttctg 50623401  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||||| |||||| ||||||  ||||| ||||        |||||||||| ||||||||||||||||||||||||||||    
T  50623400 attttatggtccccatgacatttagtgctgatgcgtct-gttttttatcaattaatgtgtgccacgtgtgtaattccattttttt 50623317  T

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Target: chr1; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 9347602 - 9347419
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||  ||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  9347602 cttaattgcactttcccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 9347503  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| | |||||| |||||| ||||||||||||       |||||||||| |||||||| ||||||||||||||||||    
T  9347502 attttatggttcccatgacatttagtgttgatgtgtctatttttttatcaattaatgtgtgccacatgtgtaattccatttttt 9347419  T

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Target: chr1; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 159 - 341
Target Start/End: Complemental strand, 28634208 - 28634024
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  | ||||||||| ||||||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctttctg 28634109  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||||| |||||| ||||||  |||| |||||        |||||||||| ||| ||||||||||||||||||||||||    
T  28634108 attttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtaccacgtgtgtaattccattttttt 28634024  T

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Target: chr1; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 159 - 341
Target Start/End: Original strand, 48104681 - 48104864
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 48104780  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||||| |||||| ||||||  |||| |||||        |||||||||| ||||||||||||||||||||||||||||    
T  48104781 attttatggtccccatgacatttagtgctgatatgtct-gttttttatcaattaatgtgtgccacgtgtgtaattccattttttt 48104864  T

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Target: chr1; HSP #9
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 159 - 338
Target Start/End: Original strand, 42611188 - 42611370
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| |||  ||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||| || ||||||||| ||||||||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgcctcctatagttttccccctttctg 42611287  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtct-annnnnnnatcaattaatttgtgccacgtgtgtaattccatttt 338  Q
    |||||||||| | |||||| |||||| |||||||||||         |||||||||| |||||||||||||||||||||||||    
T  42611288 attttatggttcccatgacatttagtgttgatgtgtctgttttttttatcaattaatatgtgccacgtgtgtaattccatttt 42611370  T

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Target: chr1; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 159 - 339
Target Start/End: Complemental strand, 42611665 - 42611483
Alignment:
Q  159 ttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||  | ||||||||||||||||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccctatagtttttcccctttctg 42611566  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    |||||||||||| ||| || ||||||  ||||||||||        |||||||||| ||||||||||||| ||||||||||||    
T  42611565 attttatggtccccataacatttagtgctgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgcaattccattttt 42611483  T

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Target: chr1; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 159 - 339
Target Start/End: Complemental strand, 50430132 - 50429950
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | |||||||||  |||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctg 50430033  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    |||||||||||| |||||| ||||||  |||| |||||        |||||||||| ||||||||||||||||||||||||||    
T  50430032 attttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaattccattttt 50429950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 21687027 - 21687211
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||  | ||||||||| | |||||||    
T  21687027 cttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctcctttct 21687126  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| ||||||  |||| |||||        |||||||||| |||||||||||||||||||||||||||    
T  21687127 gattttatggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 21687211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 158 - 339
Target Start/End: Complemental strand, 6703946 - 6703764
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||   |||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||    
T  6703946 cttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgcctcatatagttttccccctttct 6703847  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    ||||||||||||| |||||| ||||||  |||| |||||        |||||||||| | |||||||||||||||| |||||||    
T  6703846 gattttatggtcctcatgacatttagtgctgatatgtct-gttttttatcaattaatgtatgccacgtgtgtaatttcattttt 6703764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 26814696 - 26814822
Alignment:
Q  158 cttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  26814696 cttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 26814795  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||||| |||||| ||||||    
T  26814796 gattttatggtccccatgacatttagt 26814822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 159 - 340
Target Start/End: Original strand, 999115 - 999295
Alignment:
Q  159 ttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  | ||||| ||||| |||||||||    
T  999115 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatag-ttttctcctttctga 999213  T
Q  258 ttttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||  |||||| |||||| || ||||||||        |||||||||| |||||||||||||||||||||||||||    
T  999214 ttttatggtctccatgacatttagtgttaatgtgtct-gttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 999295  T

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Target: chr1; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 20480170 - 20480295
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  20480170 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 20480269  T
Q  257 attttatggtccacatgacgtttagt 282  Q
    |||||||||||| |||||| ||||||    
T  20480270 attttatggtccccatgacatttagt 20480295  T

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Target: chr1; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 999576 - 999392
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| ||||| ||| |||||||||||||||||| ||||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  999576 cttaattgcacttttccccctatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctatagttttccccctttctg 999477  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtct-annnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||| |||||| ||||||  ||||| ||||         |||||||||| |||||||||||||||||||||||||||    
T  999476 attttatggtccccatgacatttagtgctgatgcgtctgttttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 999392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 32163095 - 32162919
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  32163095 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccttatagttttccccctttct 32162996  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| ||||||  |||| | | |        |||||||||| ||| |||||||||||||||||||||||    
T  32162995 gattttatggtccccatgacatttagtgctgattttttt--------atcaattaatgtgttccacgtgtgtaattccatttttt 32162919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 158 - 339
Target Start/End: Complemental strand, 46824330 - 46824148
Alignment:
Q  158 cttaattgcactttttcc--ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||||||  |||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||| |    
T  46824330 cttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttttt 46824231  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    ||||||||||||| |||||| ||||||  |||  |||||        |||||||||| |||| |||||||||||||||||||||    
T  46824230 gattttatggtccccatgacatttagtgctgaaatgtct-gttttttatcaattaatgtgtgtcacgtgtgtaattccattttt 46824148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 159 - 341
Target Start/End: Original strand, 46823846 - 46824021
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| |||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctg 46823945  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||| | |||||| |||||| ||||| | |          |||||||||| ||||||||||||||||||||||||||||    
T  46823946 attttatggtacccatgacatttagtgttgattttt---------tatcaattaatgtgtgccacgtgtgtaattccattttttt 46824021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 49317754 - 49317936
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||||| | |  | ||||||||| ||||||||||    
T  49317754 cttaattgcacttttccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctatagttttccccctttctg 49317853  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||| |||||| ||||||  ||||||||||        |||||||||| | || ||||||||||||||||||||||    
T  49317854 attttatggtccccatgacatttagtgctgatgtgtctgtttttttatcaattaatgt-tgtcacgtgtgtaattccatttttt 49317936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 49318217 - 49318035
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||  ||| ||||||||| |||||||||||||||||| |||||||||| |||||||||||| |||  | ||||||||| ||||||||||    
T  49318217 cttaattgcactttcccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccctttctg 49318118  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| | |||||| ||||||  ||||||||||        |||||||||| |||||||||||||||||| ||||||||    
T  49318117 attttatggttcccatgacatttagtgctgatgtgtct-gttatttatcaattaatgtgtgccacgtgtgtaatttcatttttt 49318035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 158 - 341
Target Start/End: Original strand, 27172118 - 27172298
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  27172118 cttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 27172217  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||| | | |||||| |||||   || |||||||        |||||||||| |||||||||||||||||| |||||||||    
T  27172218 attttatgcttcccatgacatttag---tgttgtgtct-gttttttatcaattaatgtgtgccacgtgtgtaatttcattttttt 27172298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 50949599 - 50949434
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    ||||||||||||||||||||||||||||||| | ||| |||| |||||||||||| |||  | |||||||||||||||||||||||||||||| | ||||    
T  50949599 ccctatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgccccctatagtttttcccctttctgattttatggttctcatg 50949500  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    || ||||||  |||||||| |        |||||||||| |||||||||||||||||||||||||||    
T  50949499 acatttagtgctgatgtgtgt-gttatttatcaattaatgtgtgccacgtgtgtaattccatttttt 50949434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 158 - 267
Target Start/End: Original strand, 13918448 - 13918559
Alignment:
Q  158 cttaattgcactttttcc--ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  13918448 cttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 13918547  T
Q  256 gattttatggtc 267  Q
    ||||||||||||    
T  13918548 gattttatggtc 13918559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 158 - 341
Target Start/End: Original strand, 20371042 - 20371221
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  | | ||| |||||||||||||||    
T  20371042 cttaattgcactttccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctgtag-ttttcccctttctga 20371140  T
Q  258 ttttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||||  ||||| ||||||  |||| |||||        |||||||||| ||||  ||||||||||||||||||||||    
T  20371141 ttttatggtccctatgacatttagtgctgatatgtct-gttttttatcaattaatgtgtg--acgtgtgtaattccattttttt 20371221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 48105168 - 48105050
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  48105168 cttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 48105069  T
Q  256 gattttatggtccacatga 274  Q
    ||||||||||||| |||||    
T  48105068 gattttatggtccccatga 48105050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 28633722 - 28633898
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  28633722 cttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 28633821  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||| | |||||| ||||||  || | | | |        |||||||||| |||||||||||||||||||||||||||    
T  28633822 gattttatggttcccatgacatttagtgctggttttttt--------atcaattaatgtgtgccacgtgtgtaattccatttttt 28633898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 341
Target Start/End: Original strand, 6703462 - 6703637
Alignment:
Q  158 cttaattgcactttttcc--ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||||||  |||||||||  |||||||||||||||||||| ||||||||||||||||||||| |||  | ||||||||| ||| |||||    
T  6703462 cttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttccccttttct 6703561  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||||||| |||||| ||||||  || | | |          |||||||||| ||||||||||||||||||||||||||||    
T  6703562 gattttatggtccccatgacatttagtgctggttttt----------atcaattaatgtgtgccacgtgtgtaattccattttttt 6703637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 26815171 - 26815053
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  | |||| |||| |||||||||    
T  26815171 cttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctttct 26815072  T
Q  256 gattttatggtccacatga 274  Q
    ||||||||||||| |||||    
T  26815071 gattttatggtccccatga 26815053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 44911045 - 44911210
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    ||||||| |||| |||||||||||||||||||||||| |||| |||||||||||| |||  | ||||||||| |||||||||||||||||||| | ||||    
T  44911045 ccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatg 44911144  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |  |||||| |||||||||||        ||||||||||  |||||||| |||||||||||||||||    
T  44911145 atatttagtgttgatgtgtct-gttatttatcaattaatgcgtgccacgagtgtaattccatttttt 44911210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 13918919 - 13918793
Alignment:
Q  158 cttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||| |||  | ||||||||| |||| || |    
T  13918919 cttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgccccctatagttttcccccctttt 13918820  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||||| |||||| ||||||    
T  13918819 gattttatggtccccatgacatttagt 13918793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 280
Target Start/End: Complemental strand, 20371404 - 20371280
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcacccc-atagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |||  | ||||||||  |||||||||    
T  20371404 cttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctttct 20371305  T
Q  256 gattttatggtccacatgacgttta 280  Q
    ||||||||||||| |||||| ||||    
T  20371304 gattttatggtccccatgacattta 20371280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 280
Target Start/End: Complemental strand, 20480663 - 20480542
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||  | |  | |||||| |||||||||||||    
T  20480663 cttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgat--ttccccctatagtgtttcccctttctg 20480566  T
Q  257 attttatggtccacatgacgttta 280  Q
    |||||||||||| |||||| ||||    
T  20480565 attttatggtccccatgacattta 20480542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 159 - 340
Target Start/End: Complemental strand, 44911488 - 44911306
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||| ||||||||  ||||||||| ||||||||||||||||||||| || |||| |||||||||||| |||  | ||||||||| | ||||||||    
T  44911488 ttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccctatagttttcctcctttctg 44911389  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| | |||||| |||| |  ||||||||||        |||||||||| ||||||||||||||||||  |||||||    
T  44911388 attttatggttctcatgacatttaatgctgatgtgtct-gttatttatcaattaatgtgtgccacgtgtgtaattttatttttt 44911306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 49318494 - 49318314
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||| |||| ||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||| |    | |||||||||  |||||||||    
T  49318494 cttaattgcatttttccccctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgattttatcccctatagtttt--ccctttctg 49318397  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| | |||||| ||||||  ||||||||||        |||||||||| |||||||| | ||||||||||||||||    
T  49318396 attttatggttcccatgacatttagtgctgatgtgtct-gttttttatcaattaatgtgtgccacatatgtaattccatttttt 49318314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 4692024 - 4692205
Alignment:
Q  158 cttaattgcactttttcc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| ||| ||||||||||  |||||| |||||||||| || ||||||| |||||||| ||| |||  | ||||||||  ||||||||||    
T  4692024 cttaattgcactttctcctctatagtttgctaattgtacgattttgcatcctatagtttaaaacgagccattttgccccctatagtttc-cccctttctg 4692122  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| | |||||| ||||||  ||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  4692123 attttatggttcccatgacatttagtgctgatgtgtct-gttatttatcaattaatgtgtgccacgtgtgtaattccatttttt 4692205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 327
Target Start/End: Complemental strand, 21687518 - 21687348
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||| |||||||| ||| |||| |||| |||||||||||||||| ||| ||||||||||||||||||||| | |    | ||||||| ||||||||||    
T  21687518 cttaatagcacttttccccctataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttttccctctgtagttttccccctttctg 21687419  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgt 327  Q
    |||||||||||| |||||| ||||||  ||||||||||        |||||||||| ||||||||||||||    
T  21687418 attttatggtccccatgacatttagtgctgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgt 21687348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 50429658 - 50429841
Alignment:
Q  158 cttaattgcactttttccct--atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||| |||||| ||||  ||| ||||  ||||||||||||||||||| ||||||||||||||||||||| |||  | |||||||||   |||||||    
T  50429658 cttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcatcctttct 50429757  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtct-annnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    ||||||||||||| |||||| ||||||  ||||||||||         |||||||||  ||||||||||||||||||||||||||    
T  50429758 gattttatggtcc-catgacatttagtgctgatgtgtctgttttttttatcaattaacgtgtgccacgtgtgtaattccattttt 50429841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 27172593 - 27172468
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  | || |||| |||||||||||||||||| ||||| ||||||||||||||||| |||  | ||||||||| |||||||||    
T  27172593 cttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttgc-ccctatagttttccccctttct 27172495  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||||| |||||| ||||||    
T  27172494 gattttatggtccccatgacatttagt 27172468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 32162734 - 32162849
Alignment:
Q  161 aattgcactttttc--cctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgat 258  Q
    ||||||||||||||  ||||||||||| ||||||||| |||||||||||||||||||||||||||| || |     | ||||||||||||||||||||||    
T  32162734 aattgcactttttcttcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagc-atcc-----cctatagtttttcccctttctgat 32162827  T
Q  259 tttatggtccacatgacgttta 280  Q
    |||||||||| |||||| ||||    
T  32162828 tttatggtccccatgacattta 32162849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 159 - 340
Target Start/End: Complemental strand, 44224169 - 44223988
Alignment:
Q  159 ttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    |||||||||||||  ||| | ||||||  |||||||| ||||||||| ||||||||||||||||||||||| ||   | ||||||||| |||||||||||    
T  44224169 ttaattgcactttgccccatgtagtttaccaattgtgtgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttacccctttctga 44224070  T
Q  258 ttttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||  ||||| ||||||  |||| |||||        |||||||||| |||| ||||||||||||| ||||||||    
T  44224069 ttttatggtccttatgacatttagtgctgatatgtct-gttttttatcaattaatgtgtgtcacgtgtgtaatttcatttttt 44223988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 47498303 - 47498427
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    ||||||||||||||  |||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||| |||    |||||||||  |||||| |||    
T  47498303 cttaattgcactttccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacaagcgattttgccctctatagttttctccctttttga 47498402  T
Q  258 ttttatggtccacatgacgtttagt 282  Q
    ||||||||||  |||||| ||||||    
T  47498403 ttttatggtctccatgacatttagt 47498427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 39692052 - 39691940
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||| |||||||||||||||||||||||||||||  ||||||||| | |||| |||  | |||  |||| |||||||||    
T  39692052 cttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttgcaccctatctttttccccctttct 39691953  T
Q  256 gattttatggtcc 268  Q
    |||||||||||||    
T  39691952 gattttatggtcc 39691940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 266
Target Start/End: Complemental strand, 19008802 - 19008692
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||  ||||||||||||||||||||||||||||| ||||| || ||| |||  | |||| |||| |||||||||    
T  19008802 cttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctataattttccccctttct 19008703  T
Q  256 gattttatggt 266  Q
    ||||| |||||    
T  19008702 gatttgatggt 19008692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 50615290 - 50615382
Alignment:
Q  247 cccctttctgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||||||||||||| |||||| |||| |  ||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  50615290 cccctttctgattttatggtccccatgacatttaatgctgatgtgtct-gttttttatcaattaatatgtgccacgtgtgtaattccatttttt 50615382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 50623118 - 50623210
Alignment:
Q  247 cccctttctgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||||||||||||| |||||| |||| |  ||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  50623118 cccctttctgattttatggtccccatgacatttaatgctgatgtgtct-gttttttatcaattaatatgtgccacgtgtgtaattccatttttt 50623210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 421
Target Start/End: Original strand, 19007893 - 19007952
Alignment:
Q  362 ttttcagattttgagaaaatgaggcacgtgaggcttctcataccctcacaaaatcttacc 421  Q
    |||||| ||||| |||||| ||||||||||| ||||||||||||||||||||||| ||||    
T  19007893 ttttcacatttttagaaaaggaggcacgtgatgcttctcataccctcacaaaatcctacc 19007952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 6002947 - 6002874
Alignment:
Q  157 acttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    ||||||||||||||||  |||||||  |||  ||||||||||||||||||||||||  ||||||||||||||||    
T  6002947 acttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccatgtttttaaacgagcgatt 6002874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 436 - 474
Target Start/End: Original strand, 19008010 - 19008048
Alignment:
Q  436 cccccaaatcagaatctctaacttctcaaaatccctaac 474  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19008010 cccccaaatcagaatctctaacttctcaaaatccctaac 19008048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 6002239 - 6002311
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  ||||||||||||| |||||||||||||||  ||||||||||||||||    
T  6002239 cttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgatt 6002311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 47498546 - 47498493
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccat 210  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  47498546 cttaattgcacttttccccctatagtttgtcaattgtgcggttttgcaccccat 47498493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 49284411 - 49284483
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  49284411 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 49284483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 44223745 - 44223797
Alignment:
Q  215 ttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtc 267  Q
    |||||||||||||| |||  | |||||||||||||||||||||||||||||||    
T  44223745 ttaaacgagcgattttgccccctatagtttttcccctttctgattttatggtc 44223797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 26814834 - 26814871
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||||||||||||||||||||||||||    
T  26814834 atcaattaatgtgtgccacgtgtgtaattccatttttt 26814871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 26815034 - 26814997
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||||||||||||||||||||||||||    
T  26815034 atcaattaatgtgtgccacgtgtgtaattccatttttt 26814997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 50949182 - 50949235
Alignment:
Q  175 cctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||| || |||||||||||||||||||| ||| |||| ||||||||||||    
T  50949182 cctatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgatt 50949235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 50615242 - 50615289
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgc 203  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||    
T  50615242 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 50623070 - 50623117
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgc 203  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||    
T  50623070 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 19007737 - 19007796
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagtttt 216  Q
    ||||||||||||||  ||| ||||||||| ||||||||||||||||| ||| ||||||||    
T  19007737 cttaattgcactttcccccctatagtttgccaattgtgcgattttgccccctatagtttt 19007796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 17518656 - 17518602
Alignment:
Q  155 tgacttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcacccc 208  Q
    |||||||||||||||||| ||| |||  |||| ||||||||||||||||||||||    
T  17518656 tgacttaattgcacttttccccctatcttttgccaattgtgcgattttgcacccc 17518602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 341
Target Start/End: Complemental strand, 48105029 - 48104991
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  48105029 atcaattaatgcgtgccacgtgtgtaattccattttttt 48104991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 49285081 - 49285035
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||| ||||||||||||||||||||||||  |||||||| |||||||    
T  49285081 tttgccaattgtgcgattttgcaccccatgtttttaaacaagcgatt 49285035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 341
Target Start/End: Original strand, 50949289 - 50949327
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  50949289 atcaattaatgtgtgtcacgtgtgtaattccattttttt 50949327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 6712215 - 6712244
Alignment:
Q  199 tttgcaccccatagttttaaacgagcgatt 228  Q
    ||||||||||||||||||||||||||||||    
T  6712215 tttgcaccccatagttttaaacgagcgatt 6712244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 13918779 - 13918742
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  13918779 atcaattaatgtgtgtcacgtgtgtaattccatttttt 13918742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 8108724 - 8108775
Alignment:
Q  159 ttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcacccc 208  Q
    ||||||||||||||  |||||||  ||||| |||||||||||||||||||||    
T  8108724 ttaattgcacttttcctccctatcttttgttaattgtgcgattttgcacccc 8108775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 21687227 - 21687263
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  21687227 tggtatttttcagattttgagagaaggaggcacgtga 21687263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 21687323 - 21687287
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| |||| |||||||||    
T  21687323 tggtatttttcagattttgagagaatggggcacgtga 21687287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 44223973 - 44223937
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  44223973 tggtatttttcagattttgagagaaggaggcacgtga 44223937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 50429933 - 50429897
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  50429933 tggtatttttcagattttgagagaaggaggcacgtga 50429897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 50949343 - 50949379
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  50949343 tggtatttttcagattttgagagaaggaggcacgtga 50949379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 7e-50; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 28196825 - 28196641
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  28196825 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 28196726  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| ||||||  ||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  28196725 gattttatggtccccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 28196641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 9380309 - 9380492
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  9380309 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctatagttttccccctttct 9380408  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| |||||||||||| |||||        |||||||||| |||||||||||||||||||||||||||    
T  9380409 gattttatggtcctcatgacatttagtattgatatgtct-gttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 9380492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 169015 - 169199
Alignment:
Q  158 cttaattgcacttttt---ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttc 254  Q
    |||||||||||||||    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||  | ||||||||||||||||||    
T  169015 cttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccctatagtttttcccctttc 169114  T
Q  255 tgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    |||||||||||||| |||||| |||||| |||||||||||        |||||||||| || | |||||||||||||||||||||    
T  169115 tgattttatggtccccatgacatttagtgttgatgtgtctgtttttttatcaattaatgtgagtcacgtgtgtaattccattttt 169199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 169473 - 169308
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||| |||||||||||||| ||||    
T  169473 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttttgattttatggtccccatg 169374  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    || |||||| |||||||||||        |||||||||| |||||||||||||||||| ||||||||    
T  169373 acatttagtgttgatgtgtct-gttttttatcaattaatgtgtgccacgtgtgtaatttcatttttt 169308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 158 - 341
Target Start/End: Complemental strand, 39744517 - 39744332
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  39744517 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 39744418  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||| |||||| |||||| ||||||  |||| |||||        |||||||||| |||| |||||||||||||||||||||||    
T  39744417 gattttgtggtccccatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgtcacgtgtgtaattccattttttt 39744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 32703702 - 32703518
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| ||| |||||    
T  32703702 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccttttct 32703603  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| ||||||  ||||||||||        |||||||||| |||||||| ||||||||||||||||||    
T  32703602 gattttatggtccccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacatgtgtaattccatttttt 32703518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 43292039 - 43292165
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | |||||||||||||||||||    
T  43292039 cttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttct 43292138  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||||| |||||| ||||||    
T  43292139 gattttatggtcctcatgacatttagt 43292165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 48405964 - 48406147
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||||| |||  | |||| |||| ||||||||||    
T  48405964 cttaattgcacttttccccctatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctttctg 48406063  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    | |||||||||| |||||| ||||||  ||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  48406064 actttatggtccccatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 48406147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 23539843 - 23540024
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| |||  | |||| |||| | |||||||||    
T  23539843 cttaattgcactttccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctatatttttcctcctttctga 23539942  T
Q  258 ttttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||| | |||||| ||||||  |||||||||||       |||||||||| |||||||||||||||||||||||||||    
T  23539943 ttttatggttcccatgacatttagtgctgatgtgtcta-ttatttatcaattaatgtgtgccacgtgtgtaattccatttttt 23540024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 158 - 294
Target Start/End: Complemental strand, 4239418 - 4239280
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | |||| |||| |||||||||    
T  4239418 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatatttttccccctttct 4239319  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtct 294  Q
    ||||||||||||| |||||| |||||| ||||| |||||    
T  4239318 gattttatggtccccatgacatttagtgttgatatgtct 4239280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 25162347 - 25162182
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||||||||||| |||  | ||||||||| |||||||||||||||||||||| ||||    
T  25162347 ccctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatg 25162248  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    || ||||||  |||| |||||        |||||||||| |||||||||||||||||||||||||||    
T  25162247 acatttagtgctgatatgtct-gttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 25162182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 158 - 341
Target Start/End: Original strand, 28196348 - 28196532
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||| |||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  28196348 cttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 28196447  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||||||| |||||| |||| |  ||||||||||        |||||||||| ||||||||||||||||||  ||||||||    
T  28196448 gattttatggtccccatgacatttaatgctgatgtgtct-gttttttatcaattaatatgtgccacgtgtgtaattttattttttt 28196532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 23540304 - 23540121
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |  | ||||||||| |||||||||    
T  23540304 cttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctatagttttccccctttct 23540205  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| ||||||  |||||||| |        || ||||||| |||| ||||||||||||||||||||||    
T  23540204 gattttatggtccccatgacatttagtgctgatgtgtgt-gttttttattaattaatgtgtgtcacgtgtgtaattccatttttt 23540121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 293269 - 293151
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  293269 cttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccgtatagttttccccctttct 293170  T
Q  256 gattttatggtccacatga 274  Q
    |||||||||| || |||||    
T  293169 gattttatggcccccatga 293151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 39086683 - 39086491
Alignment:
Q  150 tttaatgacttaattgcactttt-tccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttc 247  Q
    ||||||| ||||||||||||||| |||| ||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||  | ||||||||| |    
T  39086683 tttaatggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctatagttttcc 39086584  T
Q  248 ccctttctgattttatggtccacatgacgtttagtattgatgtgtct-annnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    ||||||||||||||||||||  |||||| ||||||  ||||||||||         |||||||||| ||||| ||||||||||||||||||||    
T  39086583 ccctttctgattttatggtctgcatgacatttagtgctgatgtgtctgttttttttatcaattaatgtgtgctacgtgtgtaattccattttt 39086491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 9023246 - 9023429
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||  | ||||||||| ||||||| |    
T  9023246 cttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccctatagttttccccctttat 9023345  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| |||| |  |||| |||||        |||||||||| |||||||||||||||||| ||||||||    
T  9023346 gattttatggtccccatgacatttaatgctgatatgtct-gttttttatcaattaatgtgtgccacgtgtgtaatttcatttttt 9023429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 9023732 - 9023556
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||  | ||||||||| |||||||||    
T  9023732 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttct 9023633  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| ||| |  |||||| ||| | | | |        |||||||||| |||||||||||||||||||||||||||    
T  9023632 gattttatggtccccatcagatttagtgttggttttttt--------atcaattaatatgtgccacgtgtgtaattccatttttt 9023556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 9380793 - 9380667
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  9380793 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttct 9380694  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||||| |||||| ||||||    
T  9380693 gattttatggtccccatgacatttagt 9380667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 25161880 - 25162006
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  25161880 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 25161979  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    |||| |||||||| |||||| ||||||    
T  25161980 gattgtatggtccccatgacatttagt 25162006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 392
Target Start/End: Original strand, 292784 - 293019
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| ||||||||| |||||||| | ||||||||||||||||||||| |||  | || |||||| |||||||||    
T  292784 cttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgccccctacagttttccccctttct 292883  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttttnnnnnnnnnnnnnn 355  Q
    ||||||||||||| |||||| ||||||  |||| |||||        || ||||||| ||||||||||||||||||||||||||||                  
T  292884 gattttatggtccccatgacatttagtgctgatatgtct-gttttttattaattaatgtgtgccacgtgtgtaattccatttttttaaaaataaaaaaaa 292982  T
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  292983 tggtatttttcagattttgagagaaggaggcacgtga 293019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 174 - 280
Target Start/End: Complemental strand, 48406419 - 48406313
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    ||||||| |||| ||||||||||||||||||||| |||||||||||||||||||| |||  | |||||||||||||||||||||||||||||||| ||||    
T  48406419 ccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatggtccccatg 48406320  T
Q  274 acgttta 280  Q
    || ||||    
T  48406319 acattta 48406313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 158 - 341
Target Start/End: Original strand, 26207363 - 26207546
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||  ||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||| |||  | ||||||||| | ||||||||    
T  26207363 cttaattgcactttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctg 26207462  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||| | |||||| |||| |  |||||||| |        |||||||||| |||||||||||||||||| |||||||||    
T  26207463 attttatggttcccatgacatttaatgctgatgtgt-ttgttatttatcaattaatgtgtgccacgtgtgtaatttcattttttt 26207546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 32703227 - 32703401
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||| |||| ||||||||||||| |||||||| ||||||||||||||||||| |||  | ||||||||| |||||||||    
T  32703227 cttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttct 32703326  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaatt 331  Q
    ||||||||||||| | |||| |||| |  ||||||||||        |||||||||| ||||||||||||||||||    
T  32703327 gattttatggtccccgtgacatttaatgctgatgtgtct-gttttttatcaattaatgtgtgccacgtgtgtaatt 32703401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 39744032 - 39744158
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||||||  ||||||||  ||||||||||||||| ||||||||| |||||||||||||||| |||  | ||||||||| |||||||||    
T  39744032 cttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctatagttttccccctttct 39744131  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||||| | ||| |||||||    
T  39744132 gattttatggtccccgtgatgtttagt 39744158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 12757788 - 12757951
Alignment:
Q  176 ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatgac 275  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||   | |||||||||||| ||||||||||||||||||| |||||     
T  12757788 ctatagtttgtcaattgtgcgattttgcatctcatagttttaaacgagcgattttgtcccctatagtttttcctctttctgattttatggtccccatgat 12757887  T
Q  276 gtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
     ||||||  |||| | | |        |||||||||| |||| |||||||||||||||||||||    
T  12757888 atttagtgctgatatctgtttttttttatcaattaatgtgtggcacgtgtgtaattccattttt 12757951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 43292391 - 43292228
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||| ||||||| |||||||||||||||||| ||||||||||||||||||||||| |||  | ||||| ||||||||||||||||||||| ||||  |||    
T  43292391 ccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatag-ttttcccctttctgattttat-gtcccaatg 43292294  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    || |||||| ||||| |||||        |||||||||| |||||||||||||||||| ||||||||    
T  43292293 acatttagtgttgatatgtct-gttttttatcaattaatgtgtgccacgtgtgtaatttcatttttt 43292228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 26207780 - 26207660
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||||||||||| |||  | ||||||||| | |||||||||||||||||| | ||||    
T  26207780 ccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctgattttatggttcccatg 26207681  T
Q  274 acgtttagtattgatgtgtct 294  Q
    |  |||||| |||||||||||    
T  26207680 atatttagtgttgatgtgtct 26207660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 174 - 282
Target Start/End: Complemental strand, 44468957 - 44468850
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||  | ||||||||| | |||||||||||||||| ||| ||||    
T  44468957 ccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcctcctttctgattttatgatcc-catg 44468859  T
Q  274 acgtttagt 282  Q
    || ||||||    
T  44468858 acatttagt 44468850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 340
Target Start/End: Complemental strand, 39912519 - 39912356
Alignment:
Q  176 ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatgac 275  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||  | ||||||||||| ||||| ||||||||| |||| ||||||    
T  39912519 ctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagtgattttgccacctatagtttttcgcctttatgattttatagtccccatgac 39912420  T
Q  276 gtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
     ||||||  |||| ||||         |||||||||| ||||||||||||||||||  |||||||    
T  39912419 atttagtgctgatatgtc-cgttttttatcaattaatgtgtgccacgtgtgtaattttatttttt 39912356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 12758254 - 12758130
Alignment:
Q  159 ttaattgcactttttc-cctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    |||||||||||||||  ||||||||||| ||||| || | |||||||| |||||||||||||||||| ||| |||  | ||||||||| |||||||||||    
T  12758254 ttaattgcactttttttcctatagtttgccaattatgtgtttttgcacgccatagttttaaacgagcaattttgccccctatagttttccccctttctga 12758155  T
Q  258 ttttatggtccacatgacgtttagt 282  Q
    |||||||||||  ||||| ||||||    
T  12758154 ttttatggtccctatgacatttagt 12758130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 39912056 - 39912166
Alignment:
Q  158 cttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||  |||||||||||| | |||||||||||||| || || |||||||||||||| ||||| |||  | ||||||||| |||||||||    
T  39912056 cttaattgcacttttcctccctatagtttattaattgtgcgattttacatcc-atagttttaaacgaacgattttgcccc-tatagttttccccctttct 39912153  T
Q  256 gattttatggtcc 268  Q
    |||||||||||||    
T  39912154 gattttatggtcc 39912166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 36096526 - 36096423
Alignment:
Q  159 ttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||   ||||||  |||| ||||||||||||||||||||||||  |||||||||||||||| |||  |  ||  |||||||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttttcccctttctg 36096427  T
Q  257 attt 260  Q
    ||||    
T  36096426 attt 36096423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 36095845 - 36095922
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattt 260  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||| |||  | |||  |||||||||||||||||||    
T  36095845 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccctat-ctttttcccctttctgattt 36095922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 50678781 - 50678853
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  50678781 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 50678853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 341
Target Start/End: Complemental strand, 12758117 - 12758079
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  12758117 atcaattaatgtgtgccacgtgtgtaattccattttttt 12758079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 50679476 - 50679404
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| ||||||| ||||||||||||||||  ||||||||||||||||    
T  50679476 cttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgatt 50679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 43050610 - 43050681
Alignment:
Q  159 ttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    ||||||||||||||  |||||||  |||  ||||||||||||||||||||||||  ||||||||||| ||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgtttttaaacgagtgatt 43050681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 24775835 - 24775781
Alignment:
Q  158 cttaattgcactttttcc--ctatagtttgtcaattgtgcgattttgcaccccat 210  Q
    ||||||||||||||| ||  ||||  |||||||||||||||||||||||||||||    
T  24775835 cttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcaccccat 24775781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 56505695 - 56505757
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaa 218  Q
    ||||||||||||||| |||  |||  |||| ||||||||||||||||||||||||| ||||||    
T  56505695 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaa 56505757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 341
Target Start/End: Original strand, 39912192 - 39912230
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  39912192 atcaattaatgtgtgccacgtgtgtaatttcattttttt 39912230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 43051278 - 43051232
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||| |||||||| |||||||||||||||  ||||||||||||||||    
T  43051278 tttgccaattgtgtgattttgcaccccatgtttttaaacgagcgatt 43051232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 45830222 - 45830176
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||||||| ||||||||  ||||||| ||||||||    
T  45830222 tttgtcaattgtgcgattttacaccccatgtttttaaaagagcgatt 45830176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 25162019 - 25162056
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  25162019 atcaattaatgtgtgtcacgtgtgtaattccatttttt 25162056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 39744170 - 39744207
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  39744170 atcaattaatgtgtgccacgtgtgtaattctatttttt 39744207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 169291 - 169255
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  169291 tggtatttttcagattttgagagaaggaggcacgtga 169255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 9023445 - 9023481
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  9023445 tggtatttttcagattttgagagaaggaggcacgtga 9023481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 12757968 - 12758004
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  12757968 tggtatttttcagattttgagagaaggaggcacgtga 12758004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 28196549 - 28196585
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  28196549 tggtatttttcagattttgagagaaggaggcacgtga 28196585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 32703426 - 32703462
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  32703426 tggtatttttcagattttgagagaaggaggcacgtga 32703462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 39912341 - 39912305
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  39912341 tggtatttttcagattttgagagaaggaggcacgtga 39912305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 43292212 - 43292176
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| |||| |||||||||    
T  43292212 tggtatttttcagattttgagagaatggggcacgtga 43292176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 3e-49; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 152 - 340
Target Start/End: Complemental strand, 9035351 - 9035160
Alignment:
Q  152 taatgacttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttt-tcc 248  Q
    ||||| ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||    
T  9035351 taatggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcc 9035252  T
Q  249 cctttctgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||||||||||| ||||| ||||||  ||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  9035251 cctttctgattttatggtccagatgacatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 9035160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 20419376 - 20419192
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  20419376 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 20419277  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| | |||| ||||||  |||| |||||        |||||||||| |||||||||||||||||||||||||||    
T  20419276 gattttatggtccccgtgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 20419192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 159 - 341
Target Start/End: Original strand, 36527387 - 36527569
Alignment:
Q  159 ttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||| | |  | |||||||||||||||||||||    
T  36527387 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcaatttttccccttatagtttttcccctttctga 36527486  T
Q  258 ttttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||| |||| |||||| ||| ||  |||||||||||       |||||||||| ||||||||||||||||||||||||||||    
T  36527487 ttttatagtccccatgacatttggtgatgatgtgtcta-ttttttatcaattaatgtgtgccacgtgtgtaattccattttttt 36527569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 3205145 - 3204962
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  | ||||||||| |||||||||    
T  3205145 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttct 3205046  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| |||||| ||||||| |||        |||||||||| |||||||||||||||||| ||||||||    
T  3205045 gattttatggtccccatgacatttagtgttgatgtatct-gttttttatcaattaatgtgtgccacgtgtgtaatttcatttttt 3204962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 17156969 - 17157152
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||  | ||||||||| |||||||||    
T  17156969 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttct 17157068  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| ||||||  ||||||||||        |||||||||| |||||||||||||||||| ||||||||    
T  17157069 gattttatggtccccatgacatttagtgctgatgtgtct-gttttttatcaattaatgtgtgccacgtgtgtaatttcatttttt 17157152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 148 - 340
Target Start/End: Original strand, 48359312 - 48359503
Alignment:
Q  148 actttaatgacttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagttttt 246  Q
    ||||| ||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |  | ||||| |||     
T  48359312 acttttatggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatag-tttc 48359410  T
Q  247 cccctttctgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||||||||||||| |||||| ||||||  ||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  48359411 cccctttctgattttatggtccccatgacatttagtgctgatgtgtct-gttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 48359503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 3204671 - 3204851
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||  | ||||||||| || ||||||||    
T  3204671 cttaattgcactttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctctttctga 3204770  T
Q  258 ttttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    ||||||||||| |||||| |||| |  |||||||||||       |||||||||| ||||||||||||||||||||||||||    
T  3204771 ttttatggtccccatgacatttattgctgatgtgtcta-ttttttatcaattaatgtgtgccacgtgtgtaattccattttt 3204851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 158 - 339
Target Start/End: Complemental strand, 37889311 - 37889128
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | |||||||||  ||||||||    
T  37889311 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttct 37889212  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    ||||||||||||| |||||| ||||||  ||||||||||        |||||||||  ||||||||||||||||||||||||||    
T  37889211 gattttatggtccccatgacatttagtgctgatgtgtctgtttttttatcaattaacgtgtgccacgtgtgtaattccattttt 37889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 10533036 - 10533219
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  10533036 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 10533135  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| ||||||  |||||||| |        || |||||||||||||||||||||| ||||||||||||    
T  10533136 gattttatggtccccatgacatttagtgctgatgtgt-ttgttttttattaattaatttgtgccacgtgtgtgattccatttttt 10533219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 159 - 341
Target Start/End: Original strand, 18863970 - 18864153
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 18864069  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||||| |||||| ||||||  |||| |||||        |||||||||| |||| ||||||||||||| |||||||||    
T  18864070 attttatggtccccatgacatttagtgctgatatgtct-gttttttatcaattaatgtgtgtcacgtgtgtaatttcattttttt 18864153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 37888835 - 37889019
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  37888835 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 37888934  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtct-annnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    ||||||||||||| |||||| ||||||  ||||||||||         |||||||||  ||||||||||||||||||||||||||    
T  37888935 gattttatggtccccatgacatttagtgctgatgtgtctgttttttttatcaattaacgtgtgccacgtgtgtaattccattttt 37889019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 22740158 - 22740284
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  22740158 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 22740257  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||||| |||||| ||||||    
T  22740258 gattttatggtccccatgacatttagt 22740284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 159 - 392
Target Start/End: Complemental strand, 22740641 - 22740409
Alignment:
Q  159 ttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||||||| |||    
T  22740641 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatag-ttttcccctttatga 22740543  T
Q  258 ttttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttttnnnnnnnnnnnnnntg 357  Q
    || |||||||| |||||| ||||||  |||| |||||        ||||||||||  ||||||||||||||||| |||||||||              ||    
T  22740542 ttctatggtccccatgacatttagtgctgatatgtct-gttttttatcaattaatgcgtgccacgtgtgtaatttcatttttttaaaaataaaaaaaatg 22740444  T
Q  358 gtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||| || |||||||||||    
T  22740443 gtatttttcagattttgagagaaggaggcacgtga 22740409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 158 - 294
Target Start/End: Complemental strand, 13744284 - 13744147
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||| ||    
T  13744284 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttttg 13744185  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtct 294  Q
    |||||||||||| |||||  ||||||  ||||||||||    
T  13744184 attttatggtccccatgatatttagtgctgatgtgtct 13744147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 37972448 - 37972265
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||||     
T  37972448 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttca 37972349  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| ||||||  |||| |||||        |||||||||| |||||| |||| |||||||||||||||    
T  37972348 gattttatggtccccatgacatttagtgctgatatgtct-gttttttatcaattaatgtgtgccgcgtgcgtaattccatttttt 37972265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 37971962 - 37972087
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||   |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | |||||||||||||||||||    
T  37971962 cttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttct 37972061  T
Q  256 gattttatggtccacatgacgtttag 281  Q
    ||||||||||||| |||||| |||||    
T  37972062 gattttatggtccccatgacatttag 37972087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 20418891 - 20419016
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | |||||||||  |||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 20418990  T
Q  257 attttatggtccacatgacgtttagt 282  Q
    |||||||||||| |||||| ||||||    
T  20418991 attttatggtccccatgacatttagt 20419016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 38826947 - 38826780
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| || || |||  | ||||||||| |||||||||||||||||| ||| ||||    
T  38826947 ccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctatagttttccccctttctgattttatgatccccatg 38826848  T
Q  274 acgtttagtattgatgtgtct-annnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    || ||||||  ||||||||||         |||||||||| |||| ||||||||||||||||||||||    
T  38826847 acatttagtgctgatgtgtctgtttcttttatcaattaatgtgtgtcacgtgtgtaattccatttttt 38826780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 174 - 341
Target Start/End: Original strand, 42418611 - 42418778
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    ||||||||||||  ||||||||||||||| | || |||||||||||||||||||| |||  | ||||||||| ||||||||| |||||||||||| ||||    
T  42418611 ccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccctatagttttccccctttctaattttatggtccccatg 42418710  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    || ||||||  |||| |||||        |||||||||| ||||||||||||||||||||||||||||    
T  42418711 acatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaattccattttttt 42418778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 23950240 - 23950354
Alignment:
Q  16 gacattgcattgataaaggagtgaggcatcaaaggaaaagggnnnnnnnnnnn-ttaggatataaattatttaatattccctcatcatagtaatttaata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  23950240 gacattgcattgataaaggagtgaggcatcaaaggaaaagggaaaaaaaaaacattaggatataaattatttaatattccctcatcatagtaatttaata 23950339  T
Q  115 ctccatcttctactt 129  Q
    |||||||||||||||    
T  23950340 ctccatcttctactt 23950354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 158 - 341
Target Start/End: Original strand, 29292924 - 29293108
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||| ||||| |||| |||||||||||| |||  | ||||||||| |||||||||    
T  29292924 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctatagttttccccctttct 29293023  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||||| | |||||| ||||||  ||||||||||        |||||||| | |||||||||||||||||||| |||||||    
T  29293024 gattttatggttcccatgacatttagtgctgatgtgtct-gttatttatcaattattgtgtgccacgtgtgtaattcctttttttt 29293108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 18864453 - 18864279
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||| |||||| ||| ||||||||| |||||||||||||||||||| |||||||||||| |||||||| |||  | ||||||||| ||||||||||    
T  18864453 cttaattgtacttttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctatagttttccccctttctg 18864354  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||| |||||| ||||||  |||| | |          |||||||||| |||||||||||||||||||||||||||    
T  18864353 attttatggtccccatgacatttagtgctgattttt---------tatcaattaatgtgtgccacgtgtgtaattccatttttt 18864279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 174 - 341
Target Start/End: Complemental strand, 29293380 - 29293214
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||||||||||| ||||||||||||||||||| |||| |||| |||||||||||| |||  | ||||||||| |||||||||||||||||||| | ||||    
T  29293380 ccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatg 29293281  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    || |||| |  ||||||||||        |||||||||| |||||||||||||||||| |||||||||    
T  29293280 acatttactgctgatgtgtct-gttatttatcaattaatgtgtgccacgtgtgtaatttcattttttt 29293214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 159 - 340
Target Start/End: Complemental strand, 42419079 - 42418904
Alignment:
Q  159 ttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcacccc-atagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| ||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  42419079 ttaattgcacttttccccctatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 42418980  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||| |||||| ||||||  || | | | |        |||||||||| |||||||||||||||||||||||||||    
T  42418979 attttatggtccccatgacatttagtgctggttttttt--------atcaattaatgtgtgccacgtgtgtaattccatttttt 42418904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 174 - 341
Target Start/End: Original strand, 13741577 - 13741742
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| || |||||||| |||||||||| | ||    
T  13741577 ccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccactttctga-tttatggtccccgtg 13741675  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    || ||||||  |||| |||||        |||||||||| ||||||||||||||||||| ||||||||    
T  13741676 acatttagtgctgatctgtct-gttttttatcaattaatgtgtgccacgtgtgtaattctattttttt 13741742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 9034869 - 9035053
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcacccc-atagttttaaacgagcgattctgcttcatatagtttttcccctttc 254  Q
    ||||||||||||||| |||  |||| |||| ||||||||||||| |||||||| |||||||||||||||||||| |||  | ||||||||| ||||||||    
T  9034869 cttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctatagttttccccctttc 9034968  T
Q  255 tgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||||| |||||| |||| |  ||||||||||        || ||||||| ||||||||||||||||||  |||||||    
T  9034969 tgattttatggtccccatgacatttaatgctgatgtgtct-gttttttattaattaatgtgtgccacgtgtgtaattttatttttt 9035053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 160 - 266
Target Start/End: Complemental strand, 48359707 - 48359600
Alignment:
Q  160 taattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgat 258  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||| |||||||| |||||||||||| |||  | ||||||||| ||||||||||||    
T  48359707 taattgcactttttcccctatagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctatagttttccccctttctgat 48359608  T
Q  259 tttatggt 266  Q
    ||||||||    
T  48359607 tttatggt 48359600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 36527829 - 36527724
Alignment:
Q  177 tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatgacg 276  Q
    ||||||||| ||||| |||||||||||| ||||||||||||||||||||||| |||  | ||||||||| |||||||||||||||||||||  ||||||     
T  36527829 tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtctccatgaca 36527730  T
Q  277 tttagt 282  Q
    ||||||    
T  36527729 tttagt 36527724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 16199029 - 16198967
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaa 218  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||    
T  16199029 cttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccatagttttaa 16198967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 44599491 - 44599563
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  44599491 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 44599563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 44600187 - 44600115
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  44600187 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 44600115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 46816363 - 46816291
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||||||  |||  |||  ||||| ||||||||||||||||||| ||||||||||||||||    
T  46816363 cttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgatt 46816291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 13863341 - 13863387
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  13863341 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 13863387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 8643818 - 8643746
Alignment:
Q  158 cttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||  |||||||  |||  ||||||||||||||||||||||||  | ||||||||||||||    
T  8643818 cttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgatt 8643746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 13864008 - 13863937
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| |||||||||||||| |||||||||| ||||||||||||||||    
T  13864008 cttaattgcacttttcacccctatcttttgccaattgtgcgattt-gcaccccatatttttaaacgagcgatt 13863937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 18925372 - 18925320
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcaccccat 210  Q
    ||||||||||||||| | ||||| ||||  |||||||||||||||||||||||    
T  18925372 cttaattgcacttttcctctatattttgctaattgtgcgattttgcaccccat 18925320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 36527714 - 36527678
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36527714 atcaattaatatgtgccacgtgtgtaattccattttt 36527678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 5349787 - 5349731
Alignment:
Q  153 aatgacttaattgcactttttccctatagtttgtcaattgtgcgattttgcaccccat 210  Q
    |||| ||||||||||||||  ||||||  ||||| |||||||||||||||||||||||    
T  5349787 aatggcttaattgcactttc-ccctatcttttgttaattgtgcgattttgcaccccat 5349731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 20419029 - 20419066
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  20419029 atcaattaatgtgtgtcacgtgtgtaattccatttttt 20419066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 37972100 - 37972137
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  37972100 atcaattaatgtgtgtcacgtgtgtaattccatttttt 37972137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 9035069 - 9035105
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  9035069 tggtatttttcagattttgagagaaggaggcacgtga 9035105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 20419177 - 20419141
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  20419177 tggtatttttcagattttgagagaaggaggcacgtga 20419141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 37889112 - 37889076
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  37889112 tggtatttttcagattttgagagaaggaggcacgtga 37889076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 5e-48; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 155 - 340
Target Start/End: Complemental strand, 22429650 - 22429465
Alignment:
Q  155 tgacttaattgcactttttc-cctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttccccttt 253  Q
    |||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | |||||||||||||||||    
T  22429650 tgacttaattgcactttccctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttccccttt 22429551  T
Q  254 ctgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||||| |||||| ||||||  |||| |||||        |||||||||| |||| ||||||||||||||||||||||    
T  22429550 ctgattttatggtccccatgacatttagtgctgatatgtct-gttttttatcaattaatgtgtgtcacgtgtgtaattccatttttt 22429465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 53687890 - 53688072
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| | |  | ||||||||| |||||||||    
T  53687890 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatagttttccccctttct 53687989  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| |||||  |||||||||||        |||||||||  |||||||||||||||||||||||||||    
T  53687990 gattttatggtccccatgacatttagcgttgatgtgtct--gtttttatcaattaacgtgtgccacgtgtgtaattccatttttt 53688072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 36180558 - 36180739
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||   | ||||||||| |||||||||||    
T  36180558 cttaattgcacatttcccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctatagttttccccctttctga 36180657  T
Q  258 ttttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||| |||||| |||||| ||||| |||||        |||||||||  |||| ||||||||||||||||||||||    
T  36180658 ttttatggtccccatgacatttagtgttgatatgtct-gttttttatcaattaacgtgtgtcacgtgtgtaattccatttttt 36180739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 158 - 341
Target Start/End: Original strand, 3353130 - 3353311
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  | |  | ||||||||| ||||||||||    
T  3353130 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgat--ttccccctatagttttccccctttctg 3353227  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||||| |||||| ||||||| ||||||||||        |||||||||| ||||||  ||||||||||||||||||||    
T  3353228 attttatggtccccatgacatttagtactgatgtgtct-gttttttatcaattaatgtgtgccctgtgtgtaattccattttttt 3353311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 48160367 - 48160202
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | |||||||||||||||||||||||||||| ||| ||||    
T  48160367 ccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatgatccccatg 48160268  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    || |||||| || || | |||        |||||||||| |||||||||||||||||||||||||||    
T  48160267 acatttagtgttaatttttct-gttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 48160202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 40849013 - 40848830
Alignment:
Q  158 cttaattgcactttttccct--atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| ||||  |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||  | |||||||||  ||||||||    
T  40849013 cttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttcaccctttct 40848914  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| |||||| ||||| || ||        |||||||||| |||||||||||||||||||||||||||    
T  40848913 gattttatggtccccatgacatttagtgttgatatgcct-gttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 40848830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 158 - 339
Target Start/End: Complemental strand, 42673347 - 42673173
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  42673347 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 42673248  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    |||||||||||| ||| |  |||||| ||| | | | |        |||||||||| ||||||||||||||||||||||||||    
T  42673247 attttatggtccccatcagatttagtgttggttttttt--------atcaattaatgtgtgccacgtgtgtaattccattttt 42673173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 175 - 340
Target Start/End: Original strand, 27238486 - 27238650
Alignment:
Q  175 cctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatga 274  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||  | ||||||||| |||||||||||||||||||||| |||||    
T  27238486 cctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatga 27238585  T
Q  275 cgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    | ||||||  |||| |||||        |||||||||| ||||||| |||||||||||||||||||    
T  27238586 cttttagtgctgatatgtct-gttttttatcaattaatgtgtgccatgtgtgtaattccatttttt 27238650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 175 - 341
Target Start/End: Original strand, 24485042 - 24485199
Alignment:
Q  175 cctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatga 274  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||  | |||||||||||||||||||||||||||||||| |||||    
T  24485042 cctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccccctatagtttttcccctttctgattttatggtccccatga 24485141  T
Q  275 cgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    | ||||||  |||| | |          |||||||||| ||||||||||||||||||||||||||||    
T  24485142 catttagtgctgattttt---------tatcaattaatgtgtgccacgtgtgtaattccattttttt 24485199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 158 - 341
Target Start/End: Complemental strand, 53688354 - 53688171
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||| |||  | ||||||||| ||||||||||    
T  53688354 cttaattgcactttctcccctatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctatagttttccccctttctg 53688255  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||| | | |||||| |||||| ||||| |||||        |||||||||| |||||||| |||||||||||||||||||    
T  53688254 attttatgattctcatgacatttagtgttgatatgtct-gttatttatcaattaatgtgtgccacatgtgtaattccattttttt 53688171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 27238951 - 27238826
Alignment:
Q  159 ttaattgcactttttccct--atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||| ||||||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttccccctttctg 27238852  T
Q  257 attttatggtccacatgacgtttagt 282  Q
    |||||||||| | |||||| ||||||    
T  27238851 attttatggttcccatgacatttagt 27238826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 174 - 339
Target Start/End: Complemental strand, 3353585 - 3353420
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||  | ||||| ||| |||||||||||||||||||||| ||||    
T  3353585 ccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatag-tttccccctttctgattttatggtccccatg 3353487  T
Q  274 acgtttagtattgatgtgtct-annnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    || ||||||  ||||||||||         |||||||||| ||||||||||||||||||||||||||    
T  3353486 acatttagtgctgatgtgtctgttttttttatcaattaatgtgtgccacgtgtgtaattccattttt 3353420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 40848523 - 40848647
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  40848523 cttaattgcacttttccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 40848622  T
Q  257 attttatggtccacatgacgtttag 281  Q
    |||||||||||| |||||| |||||    
T  40848623 attttatggtccccatgacatttag 40848647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 158 - 341
Target Start/End: Original strand, 42672980 - 42673163
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||  | ||||||||| ||||||| ||    
T  42672980 cttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctttatg 42673079  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||| || |||||| ||||||  |||| ||||         |||||||||| |||||||||||||||||| |||||||||    
T  42673080 attttatggcccccatgacatttagtgctgatatgtc-cgttttttatcaattaatgtgtgccacgtgtgtaatttcattttttt 42673163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 47665913 - 47666096
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||| |||| ||||||| |||| | |  | ||||||||| ||||||| |    
T  47665913 cttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacgagtgattttaccacctatagttttcccccttttt 47666012  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||| | |||||| ||||||  |||||||||||       |||||||||| ||||||||||||||||||| |||||||    
T  47666013 gattttatggttctcatgacatttagtggtgatgtgtcta-ttatttatcaattaatgtgtgccacgtgtgtaattctatttttt 47666096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 153 - 338
Target Start/End: Complemental strand, 47666392 - 47666206
Alignment:
Q  153 aatgacttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccc 250  Q
    |||| ||||||||||||||| |||  ||||||||| ||||||||| |||||||||||||| |||| |||||||||||| |||  | ||||||||| ||||    
T  47666392 aatggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccc 47666293  T
Q  251 tttctgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttt 338  Q
    |||||||||||||||| | |||||| ||||||  |||||||| |        |||||||||| |||||||||||||||||||||||||    
T  47666292 tttctgattttatggttcccatgacatttagtgctgatgtgtgt-gttatttatcaattaatgtgtgccacgtgtgtaattccatttt 47666206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 174 - 341
Target Start/End: Original strand, 26007201 - 26007367
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    ||||||||| |  ||||||||||||||||||| ||||    
T  26007201 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttccatctttctgattttatggtccccatg 26007300  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    || ||||||  |||| | |||        |||||||||| ||||||||||||||||||| ||||||||    
T  26007301 acatttagtgctgatatatct-gttttttatcaattaatgtgtgccacgtgtgtaattctattttttt 26007367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 44007969 - 44008152
Alignment:
Q  158 cttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||  |||||||||||| |||||||||| | |||||| |  |||||||||||||||||||| |||  | |||||||||||||||||||    
T  44007969 cttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttcccctttct 44008068  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||| | |||||| ||||||  |||| |||||        |||||||||| |||| ||||||||||||||||||||||    
T  44008069 gattttatggttcccatgacatttagtgctgatatgtct-gttttttatcaattaatgtgtgtcacgtgtgtaattccatttttt 44008152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 48159899 - 48160076
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  48159899 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 48159998  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||| ||| | |||| |||||| ||  | | | |        |||||||||| |||||||||||||||||||||||||||    
T  48159999 gattttatgatccccgtgacatttagtgttagttttttt-------tatcaattaatgtgtgccacgtgtgtaattccatttttt 48160076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 10348851 - 10348725
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  10348851 cttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 10348752  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
     |||||||||||| | |||| ||||||    
T  10348751 aattttatggtccccgtgacatttagt 10348725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 10348481 - 10348664
Alignment:
Q  158 cttaattgcactttt-tccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||| ||||||||||||||||| | |||||||| |||||| |||||||||||||||| ||   | |||||||||||||||||||    
T  10348481 cttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttgtcccctatagtttttcccctttct 10348580  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    |||||||| |||| |||||| ||||||  |||| |||||        || ||||||| |||||||||||||||||| |||||||    
T  10348581 gattttatagtccccatgacatttagtgctgatatgtctgtttttttattaattaatatgtgccacgtgtgtaatttcattttt 10348664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 24485511 - 24485393
Alignment:
Q  158 cttaattgcactttt-tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||  | |||||| || |||||||||     
T  24485511 cttaattgcacttttctccctatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagtattccccctttcta 24485412  T
Q  257 attttatggtccacatgac 275  Q
    |||||||||||| ||||||    
T  24485411 attttatggtccccatgac 24485393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 36181042 - 36180916
Alignment:
Q  158 cttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |    | ||||||||||||| |||||    
T  36181042 cttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgattttttcccctatagtttttcccttttct 36180943  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||| ||| |||||| ||||||    
T  36180942 gattttatgatccccatgacatttagt 36180916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 53766166 - 53766290
Alignment:
Q  159 ttaattgcactttttcc--ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||| ||| ||| ||| ||    
T  53766166 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatag-tttccccatttttg 53766264  T
Q  257 attttatggtccacatgacgtttagt 282  Q
    |||||||||||  |||||| ||||||    
T  53766265 attttatggtctccatgacatttagt 53766290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 22429160 - 22429336
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||   ||||||| |||| ||||||||||| ||||||||| |||||||||||||||||||| ||   | ||||||||| |||||||||    
T  22429160 cttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctatagttttccccctttct 22429259  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| ||||||  |||| | | |        |||||||||| |||||||| ||||||||||||||||||    
T  22429260 gattttatggtccccatgacatttagtgctgattttttt--------atcaattaatgtgtgccacatgtgtaattccatttttt 22429336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 42456245 - 42456122
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    ||||||||||||||  ||||| ||||   |||||||||||||||||||||||||||||||||||||||||| |||  | ||||| ||| |||||||||||    
T  42456245 cttaattgcactttccccctaaagttccccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatag-tttccccctttctga 42456147  T
Q  258 ttttatggtccacatgacgtttagt 282  Q
    ||||||||||| |||||| ||||||    
T  42456146 ttttatggtccccatgacatttagt 42456122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 26007670 - 26007545
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||||||  ||||||||| ||||||| |||||||||||  |||| |||||||||||||||| |||  | ||||||||| ||||||||||    
T  26007670 ttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctatagttttccccctttctg 26007571  T
Q  257 attttatggtccacatgacgtttagt 282  Q
    |||||||||||| ||| || ||||||    
T  26007570 attttatggtccccataacatttagt 26007545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 268
Target Start/End: Complemental strand, 21896567 - 21896451
Alignment:
Q  153 aatgacttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccct 251  Q
    |||| |||||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||  |  ||  |||||||| |    
T  21896567 aatggcttaattgcattttttcccctatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttgcaccccatcatttttcccat 21896468  T
Q  252 ttctgattttatggtcc 268  Q
    || ||||||||||||||    
T  21896467 ttttgattttatggtcc 21896451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 44008452 - 44008341
Alignment:
Q  158 cttaattgcactttttc-cctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||||   ||||||||||| ||||||||| |||||||||| ||||||||||||||||| ||| | |  | |||||||||  |||||||||    
T  44008452 cttaattgcacttttcatcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctccctttctg 44008353  T
Q  257 attttatggtcc 268  Q
    ||||||||||||    
T  44008352 attttatggtcc 44008341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 265
Target Start/End: Original strand, 8314015 - 8314124
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||   ||||||| |||||||||||||||||||||||||| ||  ||||||||| |||||| |||  | |||  |||| |||||||||    
T  8314015 cttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttgcaccctatcattttccccctttct 8314114  T
Q  256 gattttatgg 265  Q
    ||||||||||    
T  8314115 gattttatgg 8314124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 339
Target Start/End: Complemental strand, 53766557 - 53766461
Alignment:
Q  242 tttttcccctttctgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    ||||||||||||||||||||||||||| |||||| ||||||  |||| |||||        |||||||||| ||||||||||||||||||||||||||    
T  53766557 tttttcccctttctgattttatggtccccatgacatttagtgctgatatgtct-gttttttatcaattaatatgtgccacgtgtgtaattccattttt 53766461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 42455792 - 42455853
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagtttta 217  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||| ||| |||||||||    
T  42455792 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgccccctatagtttta 42455853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 42455852 - 42455897
Alignment:
Q  237 tatagtttttcccctttctgattttatggtccacatgacgtttagt 282  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||    
T  42455852 tatagttttccccctttctgattttatggtccccatgacgtttagt 42455897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 1928469 - 1928419
Alignment:
Q  173 tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgag 223  Q
    |||||||  |||| ||||||||||||||||||||||||| |||||||||||    
T  1928469 tccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgag 1928419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 341
Target Start/End: Complemental strand, 27238814 - 27238776
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  27238814 atcaattaatgtgtgccacgtgtgtaattccattttttt 27238776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 26007533 - 26007496
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||||||||||||||||||||||||||    
T  26007533 atcaattaatgtgtgccacgtgtgtaattccatttttt 26007496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 40848664 - 40848701
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||||||||||||||||||||||||||    
T  40848664 atcaattaatgtgtgccacgtgtgtaattccatttttt 40848701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 53766631 - 53766569
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaa 218  Q
    ||||||||||||||| |||  |||||||||  |||||||| ||||||||||| ||||||||||    
T  53766631 cttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccctatagttttaa 53766569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 8315133 - 8315083
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccc 207  Q
    ||||||||||||||  ||| |||| ||||||||||||||||||||||||||    
T  8315133 cttaattgcactttcccccctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 10293605 - 10293662
Alignment:
Q  153 aatgacttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcacccc 208  Q
    |||| |||||||||| |||||  ||||||  |||||||||||||||||||||||||||    
T  10293605 aatggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcacccc 10293662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 341
Target Start/End: Complemental strand, 10348712 - 10348674
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  10348712 atcaattcatgtgtgccacgtgtgtaattccattttttt 10348674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 17372644 - 17372594
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcacccc 208  Q
    ||||||||||||||| ||||||| |||   |||||||||||||||||||||    
T  17372644 cttaattgcacttttcccctatattttactaattgtgcgattttgcacccc 17372594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 392
Target Start/End: Complemental strand, 22429446 - 22429412
Alignment:
Q  358 gtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||| ||||||||||||||    
T  22429446 gtatttttcagattttgagagaatgaggcacgtga 22429412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 341
Target Start/End: Complemental strand, 24485362 - 24485324
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  24485362 atcaattaatgtgtaccacgtgtgtaattccattttttt 24485324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 340
Target Start/End: Complemental strand, 42456104 - 42456070
Alignment:
Q  306 aattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||| |||||||||||||||||||||||||||    
T  42456104 aattaatgtgtgccacgtgtgtaattccatttttt 42456070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 340
Target Start/End: Original strand, 53766303 - 53766337
Alignment:
Q  306 aattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||| |||||||||||||||||||||||||||    
T  53766303 aattaatgtgtgccacgtgtgtaattccatttttt 53766337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 28702280 - 28702341
Alignment:
Q  158 cttaattgcactttttcc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaa 218  Q
    ||||||| |||||||||| ||||  |||||||||| ||||||||||||| ||||| ||||||    
T  28702280 cttaatttcactttttcctctatcttttgtcaattatgcgattttgcactccatatttttaa 28702341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 21895717 - 21895769
Alignment:
Q  242 tttttcccctttctgattttatggt-ccacatgacgtttagtattgatgtgtc 293  Q
    ||||||||||||||||||||||||| || |||||| ||||||  |||||||||    
T  21895717 tttttcccctttctgattttatggtcccccatgacatttagtgatgatgtgtc 21895769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 423
Target Start/End: Complemental strand, 21896365 - 21896298
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtgaggcttctcata-ccctcacaaaatcttaccac 423  Q
    ||||||||| ||||||||||||||  ||| |||||||  ||||||||| ||||||||||||| ||||||    
T  21896365 tggtatttt-cagattttgagaaagggagtcacgtgacccttctcatacccctcacaaaatcctaccac 21896298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 26007381 - 26007417
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  26007381 tggtatttttcagattttgagagaaggaggcacgtga 26007417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 36180755 - 36180791
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  36180755 tggtatttttcagattttgagagaaggaggcacgtga 36180791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 7e-47; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 159 - 340
Target Start/End: Original strand, 8851151 - 8851333
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 8851250  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||| |||||| |||||| ||||| |||||        |||||||||| |||||||||||||||||||||||||||    
T  8851251 attttatggtccccatgacatttagtgttgatatgtct-gttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 8851333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 159 - 341
Target Start/End: Complemental strand, 26692871 - 26692688
Alignment:
Q  159 ttaattgcactttttccct--atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 26692772  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||||| |||||| ||||||  ||||||||||        |||||||||| |||| ||||||||||||| |||||||||    
T  26692771 attttatggtccccatgacatttagtgctgatgtgtct-gttttttatcaattaatgtgtgtcacgtgtgtaatttcattttttt 26692688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 7664725 - 7664599
Alignment:
Q  158 cttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  7664725 cttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 7664626  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||||| |||||| ||||||    
T  7664625 gattttatggtccccatgacatttagt 7664599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 159 - 339
Target Start/End: Complemental strand, 19141898 - 19141719
Alignment:
Q  159 ttaattgcactttttccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgat 258  Q
    |||||||||||||  |||||||||||| |||||||||||||||||| |||||||||| |||||||||||| |||  | ||||||||| ||||||||||||    
T  19141898 ttaattgcactttccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccctttctgat 19141799  T
Q  259 tttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    |||||||| | |||||| ||||||  |||||||| ||       |||||||||| ||||||||||||||||||||||||||    
T  19141798 tttatggttcccatgacatttagtgctgatgtgttta-ttatttatcaattaatatgtgccacgtgtgtaattccattttt 19141719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 159 - 294
Target Start/End: Original strand, 26692399 - 26692536
Alignment:
Q  159 ttaattgcactttttccct--atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||||    
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctataatttttcccctttctg 26692498  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtct 294  Q
    |||||||||||| || ||| |||| |  ||||||||||    
T  26692499 attttatggtccccaagacatttattgctgatgtgtct 26692536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 8851634 - 8851460
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||| |||||||||||||    
T  8851634 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatag-ttttcccctttct 8851536  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| ||||||  |||| | |          |||||||||| |||||||||||||||||||||||||||    
T  8851535 gattttatggtccccatgacatttagtgctgattttt---------tatcaattaatgtgtgccacgtgtgtaattccatttttt 8851460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 17851454 - 17851273
Alignment:
Q  158 cttaattgcactttttccct--atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||| | |  |||||||| ||||||||||||||| |||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  17851454 cttaattgcacttttttcttttatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 17851355  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| ||||||  |||| |||||        |||||||||| |||||||||||||||||||||||||||    
T  17851354 gattttatggtcc-catgacatttagtgctgatatgtct--gtttttatcaattaatgtgtgccacgtgtgtaattccatttttt 17851273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 7980054 - 7979937
Alignment:
Q  158 cttaattgcactttttcc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||  ||  | ||||||||||||||||||||    
T  7980054 cttaattgcactttttcctctatagtttgctaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccgcctatagtttttcccctttctg 7979955  T
Q  257 attttatggtccacatga 274  Q
    |||||||||||| |||||    
T  7979954 attttatggtccccatga 7979937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 162 - 337
Target Start/End: Original strand, 7979573 - 7979748
Alignment:
Q  162 attgcactttttccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgatttt 261  Q
    ||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| || ||||||||||||    
T  7979573 attgcacttttcccttatagtttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctctttctgatttt 7979672  T
Q  262 atggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattt 337  Q
    ||| |||  ||||| ||||||  |||| |||||        |||||||||| |||| |||||||||||||| ||||    
T  7979673 atgatccctatgacatttagtgctgatatgtctgtttttttatcaattaatgtgtgtcacgtgtgtaattctattt 7979748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 16910829 - 16911014
Alignment:
Q  158 cttaattgcactttttccctat--agtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| ||| ||  |||||| |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||| | |||||||    
T  16910829 cttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttcctcctttct 16910928  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtct-annnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| |||||| ||||| |||||         |||||||||| |||||||||||| |||||| |||||||    
T  16910929 gattttatggtccccatgacatttagtgttgatatgtctgttttttttatcaattaatgtgtgccacgtgtttaattctatttttt 16911014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 7664250 - 7664368
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  | |||| |||| |||||||||    
T  7664250 cttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctttct 7664349  T
Q  256 gattttatggtccacatga 274  Q
    ||||||||||||| |||||    
T  7664350 gattttatggtccccatga 7664368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 41790510 - 41790675
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||  | ||||||||| | |||||||||||||||||| | ||||    
T  41790510 ccctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctgattttatggttctcatg 41790609  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    || |||| |  ||||||||||        |||||||||| ||||||||||||||||||  |||||||    
T  41790610 acatttaatgctgatgtgtct-gttatttatcaattaatgtgtgccacgtgtgtaattttatttttt 41790675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 158 - 267
Target Start/End: Complemental strand, 16911320 - 16911210
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||  ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||   | ||||||||| ||||||||||    
T  16911320 cttaattgcactttcgcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttctg 16911221  T
Q  257 attttatggtc 267  Q
    |||||||||||    
T  16911220 attttatggtc 16911210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 158 - 341
Target Start/End: Complemental strand, 41790964 - 41790780
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||| |||| ||||||||||||||||| |||||| |||| |||||||||||| |||  | ||||||||| || ||||||    
T  41790964 cttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccctatagttttccctctttct 41790865  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||||| | |||||  |||||| |||||||||||        ||||||||||  |||||||| ||||||||||||||||||    
T  41790864 gattttatggttcccatgatatttagtgttgatgtgtct-gttatttatcaattaatgcgtgccacgagtgtaattccattttttt 41790780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 341
Target Start/End: Original strand, 18749729 - 18749913
Alignment:
Q  159 ttaattgcactttttc-cctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    |||||||||||||| | ||| ||||||||||||| || |||||||||||||||||||||||||||  |||| |||  | |||||||||| ||||||||||    
T  18749729 ttaattgcacttttactcctctagtttgtcaattatgtgattttgcaccccatagttttaaacgaatgattttgccccctatagttttt-ccctttctga 18749827  T
Q  258 ttttatggtccacatgacgtttagtattgatgtgtc--tannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||| || ||| || ||||||  |||||||||  |        |||||||||| |||||||||||||||||| |||||||||    
T  18749828 ttttatgggccccataacatttagtgctgatgtgtctgtttttttttatcaattaatgtgtgccacgtgtgtaatttcattttttt 18749913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 174 - 282
Target Start/End: Original strand, 6324937 - 6325045
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||   | ||||||||| || |||||||||||||||| || ||||    
T  6324937 ccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttccctctttctgattttatggcccccatg 6325036  T
Q  274 acgtttagt 282  Q
    || ||||||    
T  6325037 acatttagt 6325045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 5793450 - 5793568
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| |||  | ||||||| |||||||||||||||||| || |||||||||||||||||||| |||  | ||||||||| || |||||||    
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccctatagttttccctctttctg 5793549  T
Q  257 attttatggtccacatgac 275  Q
    |||||||||||| ||||||    
T  5793550 attttatggtccccatgac 5793568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 6325401 - 6325287
Alignment:
Q  156 gacttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttccccttt 253  Q
    ||||||||||||||||| |||  ||||||||| |||||||||||||||||||| |||||| |||||||||||||| |||  | ||||||||| ||| |||    
T  6325401 gacttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctatagttttccccattt 6325302  T
Q  254 ctgattttatggtcc 268  Q
    |||| ||||||||||    
T  6325301 ctgactttatggtcc 6325287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 17850980 - 17851097
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||  | ||||| ||| ||||||| |    
T  17850980 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagtttt-aacgagcgattttgccccctatagatttccccctttat 17851078  T
Q  256 gattttatggtccacatga 274  Q
    ||||||||||||| |||||    
T  17851079 gattttatggtccccatga 17851097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 18750177 - 18750009
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||              ||||||||||    
T  18750177 cttaattgcacttctccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc--------------cccctttctg 18750092  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||| |||||| ||||||  |||||||| |        |||||||||| |||| ||||||||||||||||||||||    
T  18750091 attttatggtccccatgacatttagtgctgatgtgt-ttgttttttatcaattaatgtgtgtcacgtgtgtaattccatttttt 18750009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 259
Target Start/End: Original strand, 37720206 - 37720307
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||| |||||||||||||    
T  37720206 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc-ccctatag-ttttcccctttct 37720303  T
Q  256 gatt 259  Q
    ||||    
T  37720304 gatt 37720307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 156 - 340
Target Start/End: Original strand, 19141444 - 19141620
Alignment:
Q  156 gacttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttccccttt 253  Q
    |||||||||||||||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||||| | | |  | ||||||||| ||||       
T  19141444 gacttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgagcgaatttaccccctatagttttccccc--- 19141539  T
Q  254 ctgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
         |||||| ||| |||||| ||||||  ||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  19141540 -----tttatgatccccatgacatttagtgctgatgtgtct-gttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 19141620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 5378663 - 5378775
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||| |||||| ||||| |||||| |||  | |||| |||  || ||||||    
T  5378663 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccctctttct 5378762  T
Q  256 gattttatggtcc 268  Q
    ||||| |||||||    
T  5378763 gatttgatggtcc 5378775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 5380011 - 5379899
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||  |||||||||||||||||||||| |||||| ||||| |||||| |||  | |||| |||  |||||||||    
T  5380011 cttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccccctttct 5379912  T
Q  256 gattttatggtcc 268  Q
    ||||| |||||||    
T  5379911 gatttgatggtcc 5379899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 38490897 - 38490821
Alignment:
Q  153 aatgacttaattgcactttt-tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||| ||||||||||||||  ||||||||||||  |||||||||||||||||| | ||| |||||||||||||||||    
T  38490897 aatggcttaattgcactttcctccctatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgatt 38490821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 2638848 - 2638894
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  2638848 tttgccaattgtgcgattttgcaccccatatttttaaacgagcgatt 2638894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 7591876 - 7591830
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||    
T  7591876 tttgtcaattgtgcgattttgcaccccatgtttttaaacgagcgatt 7591830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 2639534 - 2639462
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  2639534 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 2639462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 26841589 - 26841661
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  26841589 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 26841661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 7591229 - 7591275
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  7591229 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 7591275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 18055367 - 18055314
Alignment:
Q  159 ttaattgcactttttccctatag--tttgtcaattgtgcgattttgcaccccat 210  Q
    ||||||||||||||||||| ||   |||||||||||||||||||||||||||||    
T  18055367 ttaattgcactttttccctctaccttttgtcaattgtgcgattttgcaccccat 18055314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 18296104 - 18296150
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  18296104 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 18296150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 26842264 - 26842218
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  26842264 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 26842218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 7664387 - 7664424
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||||||||||||||||||||||||||    
T  7664387 atcaattaatgtgtgccacgtgtgtaattccatttttt 7664424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 7664587 - 7664550
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||||||||||||||||||||||||||    
T  7664587 atcaattaatgtgtgccacgtgtgtaattccatttttt 7664550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 32673193 - 32673143
Alignment:
Q  159 ttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcacccc 208  Q
    |||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  32673193 ttaattgcactttttcccctatcttttgccaattgtgcgattttgcacccc 32673143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 37720305 - 37720339
Alignment:
Q  307 attaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||| ||||||||||||||||||||||||||||    
T  37720305 attaatgtgtgccacgtgtgtaattccattttttt 37720339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 7979918 - 7979881
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  7979918 atcaattaatgtgtgccacgtgtgtaattctatttttt 7979881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 6325253 - 6325217
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    |||||||||| |||| |||||||||||||||||||||    
T  6325253 atcaattaatgtgtgtcacgtgtgtaattccattttt 6325217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 15321392 - 15321440
Alignment:
Q  156 gacttaattgcactttttccctatagtttgtcaattgtgcgattttgca 204  Q
    ||||||||||||||||| ||||||  ||||| |||||||| ||||||||    
T  15321392 gacttaattgcacttttcccctatcttttgttaattgtgcaattttgca 15321440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 16911030 - 16911066
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  16911030 tggtatttttcagattttgagagaaggaggcacgtga 16911066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 17851170 - 17851206
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  17851170 tggtatttttcagattttgagagaaggaggcacgtga 17851206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 3e-46; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 174 - 341
Target Start/End: Original strand, 19514546 - 19514713
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||||||||||||||| ||||    
T  19514546 ccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatg 19514645  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    || ||||||  |||| |||||        |||||||||| ||||||||||||||||||||||||||||    
T  19514646 acatttagtgctgatatgtctgtttttgtatcaattaatgtgtgccacgtgtgtaattccattttttt 19514713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 159 - 337
Target Start/End: Original strand, 2817152 - 2817331
Alignment:
Q  159 ttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||| |||||| |||||||||||||||| |||  | |||| |||||||||||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctata-tttttcccctttctg 2817250  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattt 337  Q
    |||||||||||| |||||| |||||| |||||||||||        |||||||||| ||||||||||||||||||||||||    
T  2817251 attttatggtccccatgacatttagtgttgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaattccattt 2817331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 3888259 - 3888424
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||||||||||||||| ||||    
T  3888259 ccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtcc-catg 3888357  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    || ||||||  ||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  3888358 acatttagtgatgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 3888424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 34147143 - 34147325
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||  | ||||||||| |||||||||||    
T  34147143 cttaattgcacttttcccttatagtttatcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttctga 34147242  T
Q  258 ttttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||| | |||| ||||||  |||||| |||        |||||||||| |||| ||||||||||||||||||||||    
T  34147243 ttttatggtccccgtgacatttagtgctgatgtatctgtttttttatcaattaatgtgtgtcacgtgtgtaattccatttttt 34147325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 22729491 - 22729309
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  22729491 cttaattgcacttttccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 22729392  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||  ||||| |||||| ||||| |||||        |||||||||| |||| ||||||||||||||||||||||    
T  22729391 attttatggtccctatgacatttagtgttgatatgtct-gttttttatcaattaatgtgtgtcacgtgtgtaattccatttttt 22729309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 158 - 341
Target Start/End: Complemental strand, 12498980 - 12498793
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||  | ||||||||| |||||||||    
T  12498980 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttccccctttct 12498881  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtc--tannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||||||| |||||| ||||||  |||||||||  |        |||||||||| |||||||||||||||||| |||||||||    
T  12498880 gattttatggtccccatgacatttagtgctgatgtgtctgtttttttttatcaattaatgtgtgccacgtgtgtaatttcattttttt 12498793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 26571216 - 26571034
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| | |||||||    
T  26571216 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctcctttct 26571117  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| ||||||  |||| |||||        |||||||||| |||| ||||||||||||||||||||||    
T  26571116 gattttatggtccccatgacatttagtgctgatatgtct--gtttttatcaattaatgtgtgtcacgtgtgtaattccatttttt 26571034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 43464243 - 43464118
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  43464243 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttccccctttctg 43464144  T
Q  257 attttatggtccacatgacgtttagt 282  Q
    |||||||||||| |||||| ||||||    
T  43464143 attttatggtccccatgacatttagt 43464118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 158 - 341
Target Start/End: Complemental strand, 34147562 - 34147380
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||  | ||||||||| |||||||||    
T  34147562 cttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctatagttttccccctttct 34147463  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||||||| | |||| |||||   ||||||||||        |||||||||| |||| |||||||||||||  ||||||||    
T  34147462 gattttatggtccccgtgacatttag---tgatgtgtctgtttttttatcaattaatgtgtgtcacgtgtgtaattttattttttt 34147380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 159 - 341
Target Start/End: Complemental strand, 41072264 - 41072082
Alignment:
Q  159 ttaattgcactttttc-cctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    |||||| ||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||  | ||||||||| ||||||||| |    
T  41072264 ttaattacacttttcctcctatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttctaa 41072165  T
Q  258 ttttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||||| |||||| ||||||  ||||||||||        ||| |||||| |||| |||||||||||||||||||||||    
T  41072164 ttttatggtccccatgacatttagtgctgatgtgtct-gttttttatcgattaatgtgtgtcacgtgtgtaattccattttttt 41072082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 158 - 324
Target Start/End: Original strand, 12498569 - 12498736
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  12498569 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 12498668  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtg 324  Q
    ||||||||||| | |||||| ||||||  ||||||||||        |||||||||| |||||||||||    
T  12498669 gattttatggttc-catgacatttagtgctgatgtgtctgtctttttatcaattaatgtgtgccacgtg 12498736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 26570749 - 26570856
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   | ||||||||| |||||||||||||||||||||| ||||    
T  26570749 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttctgattttatggtccccatg 26570848  T
Q  274 acgtttag 281  Q
    || |||||    
T  26570849 acatttag 26570856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 10098991 - 10098861
Alignment:
Q  159 ttaattgcactttttc-cctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    | ||||||||| || ||||||||    
T  10098991 ttaattgcacttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctga 10098892  T
Q  258 ttttatggtccacatgacgtttagtattgat 288  Q
    ||||||||||| |||||| ||||||| ||||    
T  10098891 ttttatggtccccatgacatttagtactgat 10098861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 21207229 - 21207354
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | |||||||||  |||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 21207328  T
Q  257 attttatggtccacatgacgtttagt 282  Q
    |||||||||||| |||||| ||||||    
T  21207329 attttatggtccccatgacatttagt 21207354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 19515015 - 19514889
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||  ||| |||  | ||||||||| |||||||||    
T  19515015 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctatagttttccccctttct 19514916  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||| | |||||| ||||||    
T  19514915 gattttatggttcccatgacatttagt 19514889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 158 - 273
Target Start/End: Original strand, 25940523 - 25940640
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||  | |||||||||  ||||||||    
T  25940523 cttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttcaccctttct 25940622  T
Q  256 gattttatggtccacatg 273  Q
    ||||||||||||| ||||    
T  25940623 gattttatggtccccatg 25940640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 22729010 - 22729134
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||||  ||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  22729010 cttaattgcacttttccccctatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttgc-ccctatagttttccccctttctg 22729108  T
Q  257 attttatggtccacatgacgtttagt 282  Q
    |||||||||||| |||||| ||||||    
T  22729109 attttatggtccccatgacatttagt 22729134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 159 - 341
Target Start/End: Complemental strand, 3888713 - 3888530
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||| ||   |||| |||| ||||||| |||||||||||||||||||||||||||||||||| |||  | ||||||||| ||||||||||    
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 3888614  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||||| |||||| |||| |  ||||||||||        |||||||||| |||||||| |||||||||  ||||||||    
T  3888613 attttatggtccccatgacatttaatgctgatgtgtct-gttttttatcaattaatgtgtgccacatgtgtaattttattttttt 3888530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 43463759 - 43463863
Alignment:
Q  159 ttaattgcactttttccct-atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | |||||||||  ||||||||||    
T  43463759 ttaattgcacttttccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctga 43463858  T
Q  258 tttta 262  Q
    |||||    
T  43463859 tttta 43463863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 155 - 337
Target Start/End: Complemental strand, 2817629 - 2817448
Alignment:
Q  155 tgacttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttccccttt 253  Q
    |||||||||||||||||| ||| |||||||||  |||||||||||||| || || |||||||||||||||||||| |||| | ||||  ||| || | ||    
T  2817629 tgacttaattgcacttttccccctatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttgctccctata-atttccctcctt 2817531  T
Q  254 ctgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattt 337  Q
    || |||||||||||| |||||| ||||||| |||||||| |        |||||||||| ||||||||||||||||||||||||    
T  2817530 ctaattttatggtccccatgacatttagtactgatgtgt-ttgtttttcatcaattaatgtgtgccacgtgtgtaattccattt 2817448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 11317025 - 11316900
Alignment:
Q  159 ttaattgcactttttccctat--agtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| |  | |||| |||||||||||||||||||||||| |||||||| |||||||| |||  | ||||||||| || |||||||    
T  11317025 ttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccctatagttttccctctttctg 11316926  T
Q  257 attttatggtccacatgacgtttagt 282  Q
    |||||||||||| |||||| ||||||    
T  11316925 attttatggtccccatgacatttagt 11316900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 10098521 - 10098690
Alignment:
Q  158 cttaattgcactttttcc--ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||              |||||||||    
T  10098521 cttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgc--------------cccctttct 10098606  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||| |||||| ||||||  |||| |||||        |||||||||| |||| ||||||||||||||||||||||    
T  10098607 gattttatggtccccatgacatttagtgatgatatgtct-gttttttatcaattaatgtgtgtcacgtgtgtaattccatttttt 10098690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 282
Target Start/End: Complemental strand, 37610652 - 37610545
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    ||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||| |||  | ||||| ||| |||||||||||||||||||||| ||||    
T  37610652 ccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgccccctatag-tttccccctttctgattttatggtccccatg 37610554  T
Q  274 acgtttagt 282  Q
    || ||||||    
T  37610553 acatttagt 37610545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 158 - 265
Target Start/End: Complemental strand, 25941066 - 25940956
Alignment:
Q  158 cttaattgcactttttcc--ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttt-tcccctttc 254  Q
    ||||||||||||||| ||  ||||||||||| |||| |||||||||||| ||||||||||||||||||||||| |||  | |||||||||  ||||||||    
T  25941066 cttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccccctttc 25940967  T
Q  255 tgattttatgg 265  Q
    |||||||||||    
T  25940966 tgattttatgg 25940956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 37780322 - 37780495
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||  | ||||||||| ||            
T  37780322 cttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccc-------- 37780413  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
      |||||||||| ||| || |||||| ||||| |||||        |||||||||| |||| ||||||||||||||||||||||    
T  37780414 --tttatggtccccataacatttagtgttgatatgtctgtttttttatcaattaatgtgtgtcacgtgtgtaattccatttttt 37780495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 339
Target Start/End: Complemental strand, 37780776 - 37780623
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    ||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||| |||  | ||||| ||| |||||||||||||||||||||| ||||    
T  37780776 ccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgc-ccctatag-tttccccctttctgattttatggtccccatg 37780679  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    || ||||||  |||| | |          |||||||||| ||||||||||||||||||||||||||    
T  37780678 acatttagtgctgattttt----------atcaattaatgtgtgccacgtgtgtaattccattttt 37780623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 158 - 341
Target Start/End: Original strand, 37610204 - 37610377
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||  | ||||||||| ||            
T  37610204 cttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccttatagttttccc-------- 37610295  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
      |||||||||| ||| || |||||| ||||| |||||        |||||||||| |||| |||||||||||||||||||||||    
T  37610296 --tttatggtccccataacatttagtgttgatatgtct-gttttttatcaattaatgtgtgtcacgtgtgtaattccattttttt 37610377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 159 - 341
Target Start/End: Original strand, 30401885 - 30402063
Alignment:
Q  159 ttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||  || |||||||||| ||||||| | |||||||| ||||||||||||||| ||||||| |||  | ||||  ||||||||||| ||    
T  30401885 ttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgccccctata-attttcccctttatg 30401983  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||||| |||||  |||||| ||| | | | |        |||||||||| |||| |||||||||||||||||||||||    
T  30401984 attttatggtccccatgatatttagtgttggttttttt-----tttatcaattaatgtgtgtcacgtgtgtaattccattttttt 30402063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 158 - 266
Target Start/End: Original strand, 42919307 - 42919416
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||| ||||||||| |||| |||  ||||||||||||||| |||| |||  |||||||||||||||| |||  | |||  |||||||||||||||    
T  42919307 cttaattgctctttttcccctatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttgcaccctatcatttttcccctttctg 42919406  T
Q  257 attttatggt 266  Q
    ||||||||||    
T  42919407 attttatggt 42919416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 11351453 - 11351407
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  11351453 tttgccaattgtgcgattttgcaccccatatttttaaacgagcgatt 11351407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 18816980 - 18817058
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattt 260  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||| ||| ||  ||  |||| ||||||||||||||    
T  18816980 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcatcccatctttttccccctttctgattt 18817058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 18817663 - 18817591
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  18817663 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 18817591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 340
Target Start/End: Complemental strand, 25940955 - 25940833
Alignment:
Q  218 aacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtg 317  Q
    ||||||||||| |||  | ||||||||| |||||||||||||||||||||| |||||  | ||||  |||| ||| |        |||||||||| ||||    
T  25940955 aacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgatatatagtgctgatatgtttgtttttttatcaattaatgtgtg 25940856  T
Q  318 ccacgtgtgtaattccatttttt 340  Q
     ||||||||||||||||||||||    
T  25940855 tcacgtgtgtaattccatttttt 25940833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 31569910 - 31569980
Alignment:
Q  159 ttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||| ||| |||  ||||||||||||||||||||||||| |||  ||||||||||| ||||    
T  31569910 ttaattgcacttttccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatt 31569980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 11316717 - 11316812
Alignment:
Q  159 ttaattgcactttttcc--ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctt 252  Q
    |||||||||||||| ||  |||||||||| ||||||| | |||||||| || ||| |||||||||||| ||| |||  | ||||||||| ||||||    
T  11316717 ttaattgcacttttccctcctatagtttgccaattgtacaattttgcatcctataattttaaacgagcaattttgccccctatagttttccccctt 11316812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 26571019 - 26570983
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| ||||||||||||||    
T  26571019 tggtatttttcagattttgagagaatgaggcacgtga 26570983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 43464106 - 43464070
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    |||||||||| ||||||||||||||||||||||||||    
T  43464106 atcaattaatgtgtgccacgtgtgtaattccattttt 43464070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 11350836 - 11350881
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  11350836 tttgccaattgtgc-attttgcaccccatatttttaaacgagcgatt 11350881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 37610534 - 37610500
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattt 337  Q
    |||||||||| ||||||||||||||||||||||||    
T  37610534 atcaattaatgtgtgccacgtgtgtaattccattt 37610500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 43463904 - 43463938
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattt 337  Q
    |||||||||| ||||||||||||||||||||||||    
T  43463904 atcaattaatgtgtgccacgtgtgtaattccattt 43463938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 21207367 - 21207404
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  21207367 atcaattaatgtgtgtcacgtgtgtaattccatttttt 21207404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 23011432 - 23011383
Alignment:
Q  159 ttaattgcactttttccct-atagtttgtcaattgtgcgattttgcaccc 207  Q
    ||||||||||||||||||| ||  ||||| ||||||||||||||||||||    
T  23011432 ttaattgcactttttcccttatcttttgttaattgtgcgattttgcaccc 23011383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 33324890 - 33324838
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcacccc 208  Q
    ||||||||||||||||  ||||||  ||||||||||||| |||||||||||||    
T  33324890 cttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcacccc 33324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 10098803 - 10098767
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| |||||| |||||||    
T  10098803 tggtatttttcagattttgagagaatgagacacgtga 10098767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 21207515 - 21207479
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  21207515 tggtatttttcagattttgagagaaggaggcacgtga 21207479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 43463959 - 43463995
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  43463959 tggtatttttcagattttgagagaaggaggcacgtga 43463995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 158 - 339
Target Start/End: Complemental strand, 7654600 - 7654418
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||| || | |||  | ||||||||| |||||||||    
T  7654600 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctatagttttccccctttct 7654501  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    ||||||||||||| |||||| ||||||  ||||||||||        |||||||||| ||||||||||||||||||||||||||    
T  7654500 gattttatggtccccatgacatttagtgctgatgtgtct-gttttttatcaattaatgtgtgccacgtgtgtaattccattttt 7654418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 33974333 - 33974167
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||||||||||||||  ||||    
T  33974333 ccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtctccatg 33974234  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    || ||||||  |||| |||||        |||||||||| |||||||||||||||||||||||||||    
T  33974233 acatttagtgctgatatgtctgtttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 33974167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 22755141 - 22754959
Alignment:
Q  158 cttaattgcactttttccct--atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| ||||  |||||||||||||| |||||||||||||| ||||||||||||||||||||| |||  | ||||| |||||||||||||    
T  22755141 cttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccctatag-ttttcccctttct 22755043  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||| |||| |||||| ||||||  |||| |||||        |||||||||| |||||||||||||||||||||||||||    
T  22755042 gattttattgtccccatgacatttagtgctgatatgtct-gttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 22754959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 152 - 340
Target Start/End: Complemental strand, 10087916 - 10087728
Alignment:
Q  152 taatgacttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttccc 249  Q
    ||||| ||||||||||||||| |||  | ||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||    
T  10087916 taatggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccc 10087817  T
Q  250 ctttctgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||||||||| | |||||| ||||||  |||| ||| |        ||| |||||| |||||||||||||||||||||||||||    
T  10087816 ctttctgattttatggt-ctcatgacatttagtgctgatatgt-ttgttttttatcgattaatgtgtgccacgtgtgtaattccatttttt 10087728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 2354411 - 2354593
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||| |||| ||| |||||||| |||||||| |||||||||| ||||| |||| |||||||||||| | |  | ||||||||| ||||||||||    
T  2354411 cttaattgcatttttccccctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccctatagttttccccctttctg 2354510  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| | |||||| ||||||  ||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  2354511 attttatggttcccatgacatttagtgctgatgtgtct-gttatttatcaattaatatgtgccacgtgtgtaattccatttttt 2354593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 22684409 - 22684292
Alignment:
Q  158 cttaattgcactttttccct-atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||||||||||| | ||||| |||  | ||||||||||||||||||||    
T  22684409 cttaattgcacttttccccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttcccctttctg 22684310  T
Q  257 attttatggtccacatga 274  Q
    |||||||||||| |||||    
T  22684309 attttatggtccccatga 22684292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 22754659 - 22754776
Alignment:
Q  158 cttaattgcactttttccct-atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||||||||||| | ||||| |||  | ||||||||||||||||||||    
T  22754659 cttaattgcacttttccccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttcccctttctg 22754758  T
Q  257 attttatggtccacatga 274  Q
    |||||||||||| |||||    
T  22754759 attttatggtccccatga 22754776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 174 - 336
Target Start/End: Complemental strand, 29074406 - 29074245
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| | |  | |||||||||  ||||||||||||||||| | | ||||    
T  29074406 ccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattttatgattcccatg 29074307  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatt 336  Q
    || ||||||  ||||||||||        |||||||||| |||| ||||||||||||||||||    
T  29074306 acatttagtgctgatgtgtct-gttatttatcaattaatgtgtgtcacgtgtgtaattccatt 29074245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 174 - 336
Target Start/End: Complemental strand, 29079170 - 29079009
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| | |  | |||||||||  ||||||||||||||||| | | ||||    
T  29079170 ccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattttatgattcccatg 29079071  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatt 336  Q
    || ||||||  ||||||||||        |||||||||| |||| ||||||||||||||||||    
T  29079070 acatttagtgctgatgtgtct-gttatttatcaattaatgtgtgtcacgtgtgtaattccatt 29079009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 174 - 336
Target Start/End: Complemental strand, 29106979 - 29106818
Alignment:
Q  174 ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatg 273  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| | |  | |||||||||  ||||||||||||||||| | | ||||    
T  29106979 ccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattttatgattcccatg 29106880  T
Q  274 acgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatt 336  Q
    || ||||||  ||||||||||        |||||||||| |||| ||||||||||||||||||    
T  29106879 acatttagtgctgatgtgtct-gttatttatcaattaatgtgtgtcacgtgtgtaattccatt 29106818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 341
Target Start/End: Complemental strand, 32734047 - 32733864
Alignment:
Q  159 ttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||  | |||| ||||  |||||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctataattttctccctttctg 32733948  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||| | |||||  ||||||  |||| |||||        || ||||||| |||| ||||||||||||| |||||||||    
T  32733947 attttatggttcccatgatatttagtgctgatatgtct-gtttattattaattaatgtgtgtcacgtgtgtaatttcattttttt 32733864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 32733579 - 32733685
Alignment:
Q  176 ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatgac 275  Q
    |||||||||| ||||| | |||||||||| ||||||||||||||||||| ||| ||| || |||||||||||||||||||||||||||||| | ||||||    
T  32733579 ctatagtttgccaattatacgattttgcatcccatagttttaaacgagcaattttgcctcctatagtttttcccctttctgattttatggttcccatgac 32733678  T
Q  276 gtttagt 282  Q
     ||||||    
T  32733679 atttagt 32733685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 341
Target Start/End: Original strand, 13176634 - 13176805
Alignment:
Q  169 tttttccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtcc 268  Q
    ||||||||||||||||| ||||||| |||||||| | |||||  ||||||| |||||||| |||  | ||||||||| || |||||||||||||||||||    
T  13176634 tttttccctatagtttgccaattgtacgattttgtatcccatgattttaaatgagcgattttgccccctatagttttcccactttctgattttatggtcc 13176733  T
Q  269 acatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
     | |||| ||||||  |||| |||||        |||||||||| |||| |||||||||||||||||||||||    
T  13176734 ccgtgacatttagtgctgatatgtct-gttttttatcaattaatgtgtgtcacgtgtgtaattccattttttt 13176805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 280
Target Start/End: Complemental strand, 13177107 - 13176984
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||| |||||||||| ||| |||||| ||||||||||| |||||| |||| ||||||||||||||||||||| |||  | ||||||| | ||||||||||    
T  13177107 cttagttgcacttttccccctatagtatgtcaattgtgagattttacacctcatagttttaaacgagcgattttgccccttatagttgtccccctttctg 13177008  T
Q  257 attttatggtccacatgacgttta 280  Q
    |||||||||||| |||||| ||||    
T  13177007 attttatggtccccatgacattta 13176984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 158 - 329
Target Start/End: Complemental strand, 2354862 - 2354691
Alignment:
Q  158 cttaattgcactttttcc--ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||| |||| ||  ||||||||||||||||||||||||||||||||||| |||| |||||||| ||| |||  | ||||| ||||||||||  |    
T  2354862 cttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgccccctatag-ttttccccttcat 2354764  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaa 329  Q
    ||||||||||| | |||||| |||| |  ||||||||||        |||||||||| ||||||||||||||||    
T  2354763 gattttatggttcccatgacatttaatgctgatgtgtct-gttatttatcaattaatgtgtgccacgtgtgtaa 2354691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 33973885 - 33973990
Alignment:
Q  175 cctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatga 274  Q
    |||||||||||||| ||||||||||||| ||   ||||||||| |||||||||| ||   | ||||||||||  ||||||| |||||||||||| |||||    
T  33973885 cctatagtttgtcagttgtgcgattttgtactttatagttttacacgagcgattttgtcccctatagttttt--cctttctaattttatggtccccatga 33973982  T
Q  275 cgtttagt 282  Q
    | ||||||    
T  33973983 catttagt 33973990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 33828992 - 33829064
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  33828992 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 33829064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 33829688 - 33829616
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  33829688 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 33829616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 403650 - 403711
Alignment:
Q  157 acttaattgcacttt-ttccctatagtttgtcaattgtgcgattttgcaccccatagtttta 217  Q
    ||||||||||||||| || ||||||||||| ||||| ||| |||||||||| ||||||||||    
T  403650 acttaattgcactttctttcctatagtttgccaattttgcaattttgcacctcatagtttta 403711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 13579702 - 13579651
Alignment:
Q  158 cttaattgcactttt-tccctatagtttgtcaattgtgcgattttgcacccc 208  Q
    ||||||||||||||| ||||||| |||||  |||||||||||||||||||||    
T  13579702 cttaattgcacttttctccctatcgtttgctaattgtgcgattttgcacccc 13579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 22684271 - 22684234
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  22684271 atcaattaatgtgtgtcacgtgtgtaattccatttttt 22684234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 22754797 - 22754834
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  22754797 atcaattaatgtgtgtcacgtgtgtaattccatttttt 22754834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 22684124 - 22684160
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  22684124 tggtatttttcagattttgagagaaggaggcacgtga 22684160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 22754944 - 22754908
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  22754944 tggtatttttcagattttgagagaaggaggcacgtga 22754908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 32733698 - 32733734
Alignment:
Q  304 tcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  32733698 tcaattaatatgtgccacgtgtgtaatttcatttttt 32733734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 33974002 - 33974038
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    |||||||||| || |||||||||||||||||||||||    
T  33974002 atcaattaatgtgcgccacgtgtgtaattccattttt 33974038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 7e-41; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 158 - 341
Target Start/End: Complemental strand, 6199148 - 6198963
Alignment:
Q  158 cttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  6199148 cttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccctttct 6199049  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||| ||| |||||| ||||||  |||  |||||        |||||||||| |||||||| |||||||||||||||||||    
T  6199048 gattttatgatccccatgacatttagtgctgaaatgtctgtttttttatcaattaatgtgtgccacatgtgtaattccattttttt 6198963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 158 - 338
Target Start/End: Complemental strand, 24473820 - 24473639
Alignment:
Q  158 cttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||   | ||||||||| |||||||||    
T  24473820 cttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttct 24473721  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttt 338  Q
    ||||||||||||| |||||| ||||||  |||| |||||        |||||||||| ||||||| |||||||||| ||||||    
T  24473720 gattttatggtccccatgacatttagtgctgatatgtct-gttttttatcaattaatgtgtgccatgtgtgtaatttcatttt 24473639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 159 - 340
Target Start/End: Original strand, 34498125 - 34498297
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||| ||| ||||||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcaccctatag-tttccccctttctg 34498223  T
Q  257 attttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||| |||||| ||||||  |||| | |          |||||||||| |||||||||||||||||||||||||||    
T  34498224 attttatggtccccatgacatttagtgctgattttt----------atcaattaatgtgtgccacgtgtgtaattccatttttt 34498297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 41662523 - 41662707
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||  | |||||||||  ||||||||    
T  41662523 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttctccctttct 41662622  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
     |||||||||| | |||||| ||||||  |||||||| |        |||||||||| |||||||||||||||||||||||||||    
T  41662623 aattttatggttcccatgacatttagtgctgatgtgtttgtttttttatcaattaatgtgtgccacgtgtgtaattccatttttt 41662707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 37396710 - 37396896
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  37396710 cttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 37396809  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatt----tgtgccacgtgtgtaattccattttt 339  Q
    ||||||||||||| |||||| ||||||  |||| |||||        |||||||||||    ||||||||||||||||||||||||||    
T  37396810 gattttatggtccccatgacatttagtgctgatatgtct-gttttttatcaattaattaatgtgtgccacgtgtgtaattccattttt 37396896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 158 - 341
Target Start/End: Original strand, 24473345 - 24473529
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||||||  ||||||||| |||||||| |||||||||||||||| ||||||| |||||||| |||  | ||||||||  |||||||||    
T  24473345 cttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccctatagtttcccccctttct 24473444  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||||||| |||||| ||||||  ||| ||||||        |||||||||  ||||||||||||||||||||||||||||    
T  24473445 gattttatggtccccatgacatttagtgatgacgtgtct-gttttttatcaattaacgtgtgccacgtgtgtaattccattttttt 24473529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 158 - 341
Target Start/End: Complemental strand, 34498607 - 34498423
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||||||||  ||||||||||||||||||||||||||||||||| || |||| |||  | |||| |||| |||||||||    
T  34498607 cttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctatatttttccccctttct 34498508  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||||||| |||||| ||||||  |||| |||||        |||||||||| ||||||||||||||||||||||||||||    
T  34498507 gattttatggtccccatgacatttagtgctgatatgtct-gttttttatcaattaatgtgtgccacgtgtgtaattccattttttt 34498423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 17431289 - 17431415
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  17431289 cttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctatagttttccccctttct 17431388  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||||| |||||| ||||||    
T  17431389 gattttatggtccccatgacatttagt 17431415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 20861690 - 20861564
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||| ||||||||  |||||| || |||||||||||||||||||||||||||||||||||||||||| ||| || |||| |||| |||||||||    
T  20861690 cttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcctcctataattttccccctttct 20861591  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||||| |||||| ||||||    
T  20861590 gattttatggtccccatgacatttagt 20861564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 16169659 - 16169476
Alignment:
Q  158 cttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||  |||||||||||| |||||||||| | |||||| |  |||||||||||||||||||| |||  | |||||||||||||||||||    
T  16169659 cttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttcccctttct 16169560  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||||||| | |||||| ||||||  |||| |||||        |||||||||| |||| ||||||||||||||||||||||    
T  16169559 gattttatggttcccatgacatttagtgctgatatgtct-gttttttatcaattaatgtgtgtcacgtgtgtaattccatttttt 16169476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 25439176 - 25439053
Alignment:
Q  159 ttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    ||||| ||| ||||||| |||    
T  25439176 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatag-tttccccctttttga 25439078  T
Q  258 ttttatggtccacatgacgtttagt 282  Q
    ||||||||||| |||||| ||||||    
T  25439077 ttttatggtccccatgacatttagt 25439053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 341
Target Start/End: Original strand, 9623504 - 9623688
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||||| |  ||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||  | ||||||||| ||  |||||    
T  9623504 cttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctttttct 9623603  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||||||| | |||| ||||||  |||| |||||        |||||||||| |||| ||||||||||||| |||||||||    
T  9623604 gattttatggtccccttgacatttagtgctgatatgtct-gttttttatcaattaatatgtgtcacgtgtgtaatttcattttttt 9623688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 37397197 - 37397071
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||| |||||||||||||||||||||| | |||  | ||||| ||| |||||||||    
T  37397197 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccctatagatttccccctttct 37397098  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||||| |||||| ||||||    
T  37397097 gattttatggtccccatgacatttagt 37397071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 15444698 - 15444573
Alignment:
Q  159 ttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||||||  |||| |||  |||||||||||||||||||||||||||||||||||||||||| |    | ||||||||| || |||||||    
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctg 15444599  T
Q  257 attttatggtccacatgacgtttagt 282  Q
    |||||||||||| |||||| ||||||    
T  15444598 attttatggtccccatgacatttagt 15444573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 177 - 340
Target Start/End: Complemental strand, 33727136 - 33726980
Alignment:
Q  177 tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatgacg 276  Q
    |||||||||  ||||||||||||||||||  ||||||||||||||||||||| |||  | ||||||||| |||||||||||||||||||||| ||||||     
T  33727136 tatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgaca 33727037  T
Q  277 tttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    ||||||  || | | | |        |||||||||| |||||||||||||||||||||||||||    
T  33727036 tttagtgctggttttttt-------tatcaattaatgtgtgccacgtgtgtaattccatttttt 33726980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 6198691 - 6198786
Alignment:
Q  187 caattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatgacgtttagt 282  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||  | ||||||||| ||| |||||||||||||||||| |||||| ||||||    
T  6198691 caattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccatttctgattttatggtccccatgacatttagt 6198786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 158 - 341
Target Start/End: Original strand, 15444213 - 15444397
Alignment:
Q  158 cttaattgcactttttccct--atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||| |||| ||||  |||||||| ||||||| | ||||| ||  |||||||||||||||||||||| |||| | ||||||||| ||||||| |    
T  15444213 cttaattgcatttttcccctctatagtttgccaattgtacaattttacattccatagttttaaacgagcgattttgctccctatagttttccccctttat 15444312  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    ||||||||||||  |||||| ||||||  |||| | |||        |||||||||| |||||||||||||||||| |||||||||    
T  15444313 gattttatggtctccatgacatttagtgctgatatctct-gttttttatcaattaatatgtgccacgtgtgtaatttcattttttt 15444397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 16169176 - 16169287
Alignment:
Q  158 cttaattgcactttttc-cctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||||||||   ||||||||||| ||||||||| |||||||||| ||||||||||||||||| ||| | |  | |||||||||  |||||||||    
T  16169176 cttaattgcacttttcatcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctccctttctg 16169275  T
Q  257 attttatggtcc 268  Q
    ||||||||||||    
T  16169276 attttatggtcc 16169287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 25438791 - 25438856
Alignment:
Q  155 tgacttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaa 218  Q
    |||||||||||||||||| |||  ||||||||| ||||||||||||||||||||||||||||||||    
T  25438791 tgacttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaa 25438856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 158 - 260
Target Start/End: Original strand, 9822750 - 9822854
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||   ||||||  ||| |||||||||||||||||||||||||  |||||||||||||||| |||  |||||  |||| |||||||||    
T  9822750 cttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccatatctttttccccctttct 9822849  T
Q  256 gattt 260  Q
    |||||    
T  9822850 gattt 9822854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 2856545 - 2856632
Alignment:
Q  173 tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattt 260  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||  ||||| |    | ||||||||| ||||||||||||||    
T  2856545 tccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgttcgattttatcccctatagttttccccctttctgattt 2856632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 13936725 - 13936796
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    ||||||||||||||| ||| |||  |||  ||||||||||||||||||||||||| ||||||||||||||||    
T  13936725 cttaattgcacttttccccctatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgatt 13936796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 9823413 - 9823341
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  9823413 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 9823341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 22851392 - 22851464
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||||||||||||||||||||||||||||  |||||||| |||||||    
T  22851392 cttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgatt 22851464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 341
Target Start/End: Original strand, 33726734 - 33726851
Alignment:
Q  223 gcgattctgcttcatatagtttttcccctttctgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacg 322  Q
    |||||| ||| || ||||||||| |||||||||||||||||||||| |||||| ||||||  |||| |||||        |||||| ||| |||| |||     
T  33726734 gcgattttgcctcctatagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtct-gttttttatcaataaatgtgtgtcaca 33726832  T
Q  323 tgtgtaattccattttttt 341  Q
    |||||||||||||||||||    
T  33726833 tgtgtaattccattttttt 33726851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 39724100 - 39724028
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  39724100 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 39724028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 13027332 - 13027261
Alignment:
Q  159 ttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    ||||||||||||||   ||||||  |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 13027261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 3307366 - 3307412
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    ||||||||||||||||||||||| |||||| |||||||| |||||||    
T  3307366 tttgtcaattgtgcgattttgcatcccatatttttaaacaagcgatt 3307412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 18020138 - 18020088
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcacccc 208  Q
    ||||||||||||||| ||||||  ||||| |||||||||||||||||||||    
T  18020138 cttaattgcacttttaccctatcttttgttaattgtgcgattttgcacccc 18020088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 34313767 - 34313817
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcacccc 208  Q
    ||||||||||||||| ||||||  ||||| |||||||||||||||||||||    
T  34313767 cttaattgcacttttcccctatcttttgttaattgtgcgattttgcacccc 34313817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 9465923 - 9465874
Alignment:
Q  159 ttaattgcactttttccctatagtttgtcaattgtgcgattttgcacccc 208  Q
    ||||||||| |||||||||||  ||||| |||||||||||||||||||||    
T  9465923 ttaattgcattttttccctatcttttgttaattgtgcgattttgcacccc 9465874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 13026637 - 13026709
Alignment:
Q  158 cttaattgcacttttt--ccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||||   ||||||  |||| |||||||||||||||||||| |||  ||||||||||||||||    
T  13026637 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgatt 13026709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 13937441 - 13937369
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    ||||||||||||||| |||  |||  |||||||||||||||| ||||||||||||  ||||||||||| ||||    
T  13937441 cttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgatt 13937369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 15043636 - 15043572
Alignment:
Q  362 ttttcagattttgagaaaatgaggcacgtgaggcttctcataccctcacaaaatcttaccacaccc 427  Q
    |||||||||||||||||| | || |||||||  |||||||||||||||||||||| || |||||||    
T  15043636 ttttcagattttgagaaagt-agtcacgtgacccttctcataccctcacaaaatcctaacacaccc 15043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 37397059 - 37397022
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||| |||||||||||||||||||||||||||    
T  37397059 atcaattaatgtgtgccacgtgtgtaattccatttttt 37397022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 6092779 - 6092839
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcaccccatagttttaa 218  Q
    |||||||||| |||  ||||||  ||||||||||||||||||||||| |||||| ||||||    
T  6092779 cttaattgcattttccccctatcttttgtcaattgtgcgattttgcatcccatatttttaa 6092839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 33726693 - 33726756
Alignment:
Q  155 tgacttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagtttt 216  Q
    ||||||||||||||||||||||  ||||||||  |||||||||||||||||  || ||||||||    
T  33726693 tgacttaattgcactttttccccctatagtttaccaattgtgcgattttgcctcctatagtttt 33726756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 338
Target Start/End: Original strand, 6198799 - 6198834
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccatttt 338  Q
    |||||||||| |||||||||||||||||||||||||    
T  6198799 atcaattaatgtgtgccacgtgtgtaattccatttt 6198834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 9623938 - 9623864
Alignment:
Q  153 aatgacttaattgcactttttc-cctatagtttgtcaattgtgcgattttgcacccc--atagttttaaacgagc 224  Q
    |||| |||||||||||||||   ||||||||||| |||| ||| |||||||||||||  ||||||||||||||||    
T  9623938 aatggcttaattgcacttttcatcctatagtttgccaatcgtgtgattttgcaccccatatagttttaaacgagc 9623864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 15442763 - 15442877
Alignment:
Q  156 gacttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttccccttt 253  Q
    |||||||||||| |||| |||  |||| || | |||||||| |||||||||||||||  ||||||||| |||||| |||  | |||  |||| || ||||    
T  15442763 gacttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttgcaccctatccttttcccgcttt 15442862  T
Q  254 ctgattttatggtcc 268  Q
     ||||||||||||||    
T  15442863 gtgattttatggtcc 15442877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 341
Target Start/End: Complemental strand, 9623853 - 9623815
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattttttt 341  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  9623853 atcaattaatgtgtgccacatgtgtaattccattttttt 9623815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 39723430 - 39723476
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||| |||||||||||||||||| |||||  ||||||||||||||||    
T  39723430 tttgccaattgtgcgattttgcatcccatgtttttaaacgagcgatt 39723476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 43597803 - 43597849
Alignment:
Q  159 ttaattgcactttttccctatagtttgtcaattgtgcgattttgcac 205  Q
    ||||||||||||||| ||||| |||||  ||||||||||||||||||    
T  43597803 ttaattgcacttttttcctatcgtttgctaattgtgcgattttgcac 43597849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 15156237 - 15156185
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcacccc 208  Q
    ||||||||||||||| |||  |||  |||||||||||||||||||||||||||    
T  15156237 cttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacccc 15156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 43162236 - 43162285
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcacc 206  Q
    ||||||||||||||| ||| |||| ||||| |||||||||||||||||||    
T  43162236 cttaattgcacttttccccctatattttgttaattgtgcgattttgcacc 43162285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 765733 - 765788
Alignment:
Q  155 tgacttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcacccc 208  Q
    |||||||||||||||||| |||  |||  |||| ||||||||||||||||||||||    
T  765733 tgacttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 765788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 6198946 - 6198910
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  6198946 tggtatttttcagattttgagagaaggaggcacgtga 6198910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 16169314 - 16169350
Alignment:
Q  303 atcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    |||||||||| |||||||| |||||||||||||||||    
T  16169314 atcaattaatgtgtgccacatgtgtaattccattttt 16169350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 24473620 - 24473584
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  24473620 tggtatttttcagattttgagagaaggaggcacgtga 24473584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 82; Significance: 2e-38; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 9907 - 10091
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcacccc-atagttttaaacgagcgattctgcttcatatagtttttcccctttc 254  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||| |||||| |||||||||||||||||||| |||  | ||||||||| ||||||||    
T  9907 cttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctatagttttccccctttc 10006  T
Q  255 tgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||||| ||| || |||||| ||||| |||||        |||||| ||| |||||||||||||||||||||||||||    
T  10007 tgattttatggtccccataacatttagtgttgatatgtct-gttttttatcaatcaatgtgtgccacgtgtgtaattccatttttt 10091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 10319 - 10216
Alignment:
Q  237 tatagtttttcccctttctgattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatt 336  Q
    ||||||||| |||||||||||||||||||||| ||| || |||||| ||||| |||||        |||||| ||| |||||||||||||||||||||||    
T  10319 tatagttttccccctttctgattttatggtccccataacatttagtgttgatatgtct-gttttttatcaatcaatgtgtgccacgtgtgtaattccatt 10221  T
Q  337 ttttt 341  Q
    |||||    
T  10220 ttttt 10216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 10369 - 10311
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcaccccatagtttt 216  Q
    |||||| |||||||| |||||||||||| ||||||| ||||||||||||| ||||||||    
T  10369 cttaatagcacttttcccctatagtttgccaattgtccgattttgcaccctatagtttt 10311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 185326 - 185200
Alignment:
Q  158 cttaattgcactttt--tccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||| || ||||||    
T  185326 cttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctctttct 185227  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||||| |||||| ||||||    
T  185226 gattttatggtccccatgacatttagt 185200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 184841 - 184967
Alignment:
Q  158 cttaattgcactttt-tcc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  184841 cttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttgccacctatagttttccccctttct 184940  T
Q  256 gattttatggtccacatgacgtttagt 282  Q
    ||||||||||||| |||||| ||||||    
T  184941 gattttatggtccccatgacatttagt 184967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 340
Target Start/End: Original strand, 50077 - 50255
Alignment:
Q  158 cttaattgcactttttccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctga 257  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  | | ||| |||||||||||||||    
T  50077 cttaattgcactttccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctgtag-ttttcccctttctga 50175  T
Q  258 ttttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||  ||||| ||||||  |||| |||||        |||||||||| ||||  |||||||||||||||||||||    
T  50176 ttttatggtccctatgacatttagtgctgatatgtct-gttttttatcaattaatgtgtg--acgtgtgtaattccatttttt 50255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 280
Target Start/End: Complemental strand, 50558 - 50434
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcacccc-atagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |||  | ||||||||  |||||||||    
T  50558 cttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctttct 50459  T
Q  256 gattttatggtccacatgacgttta 280  Q
    ||||||||||||| |||||| ||||    
T  50458 gattttatggtccccatgacattta 50434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 74; Significance: 1e-33; HSPs: 3)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 158 - 337
Target Start/End: Original strand, 332 - 512
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  | ||||||||| ||| |||||    
T  332 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttct 431  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattt 337  Q
    ||||||||||||| | |||| ||||||  |||| ||| |        |||||||||| |||| |||||||||||||||||||    
T  432 gattttatggtccccgtgacatttagtgctgatatgt-ttgttttttatcaattaatgtgtgtcacgtgtgtaattccattt 512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 158 - 280
Target Start/End: Complemental strand, 814 - 693
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||  | ||||| ||||| | ||||||    
T  814 cttaattgcactttttcccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgc-ccctatag-ttttctcatttctg 717  T
Q  257 attttatggtccacatgacgttta 280  Q
    |||||||||||| |||||| ||||    
T  716 attttatggtccccatgacattta 693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 531 - 567
Alignment:
Q  356 tggtatttttcagattttgagaaaatgaggcacgtga 392  Q
    |||||||||||||||||||||| || |||||||||||    
T  531 tggtatttttcagattttgagagaaggaggcacgtga 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 280
Target Start/End: Original strand, 19623 - 19746
Alignment:
Q  158 cttaattgcactttttccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctg 256  Q
    |||||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  | |||||||| ||||||||||     
T  19623 cttaattgcaattttccccatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttctcccctttcta 19722  T
Q  257 attttatggtccacatgacgttta 280  Q
    |||||||||||| |||||| ||||    
T  19723 attttatggtccccatgacattta 19746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 20095 - 19912
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||||   ||||| |||  | ||||| ||| ||||||| |    
T  20095 cttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaactgacgattttgccccctatag-tttcccccttttt 19997  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||||||||  ||||| |||||| ||||| |||||        |||||||||| |||| ||| |||||||||| |||||||    
T  19996 gattttatggtccctatgacatttagtgttgatatgtctgtttttttatcaattaatgtgtgtcacctgtgtaattctatttttt 19912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 69; Significance: 9e-31; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 38747 - 38564
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttct 255  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| |||||||| ||||| |||  | ||||||||| |||||||||    
T  38747 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctatagttttccccctttct 38648  T
Q  256 gattttatggtccacatgacgtttagtattgatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccatttttt 340  Q
    |||||||| |||  |||||| ||||||  |||| ||| |        || ||||||| |||||||| ||||||||||||||||||    
T  38647 gattttatagtctccatgacatttagtgctgatatgtgt-gttttttattaattaatgtgtgccacatgtgtaattccatttttt 38564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 186 - 339
Target Start/End: Original strand, 38283 - 38435
Alignment:
Q  186 tcaattgtgcgattttgcaccccatagttttaaacgagcgattctgcttcatatagtttttcccctttctgattttatggtccacatgacgtttagtatt 285  Q
    ||||||||||||||||||| |||||||||||||| |||||||| |||  | ||||||||| || ||||||||||||||||||| |||||| ||||||  |    
T  38283 tcaattgtgcgattttgcatcccatagttttaaatgagcgattttgccccctatagttttccctctttctgattttatggtccccatgacatttagtgct 38382  T
Q  286 gatgtgtctannnnnnnatcaattaatttgtgccacgtgtgtaattccattttt 339  Q
    ||| |||||        |||||||||| ||||||||||||||||||| ||||||    
T  38383 gatatgtct-gttttttatcaattaatgtgtgccacgtgtgtaattcaattttt 38435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 6821 - 6775
Alignment:
Q  182 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  6821 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatt 6775  T

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Target: scaffold0328; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 6186 - 6226
Alignment:
Q  188 aattgtgcgattttgcaccccatagttttaaacgagcgatt 228  Q
    |||||||||||||| ||||||||| ||||||| ||||||||    
T  6186 aattgtgcgattttacaccccatatttttaaatgagcgatt 6226  T

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Target: scaffold1221 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 1513 - 1566
Alignment:
Q  158 cttaattgcactttttcc-ctatagtttgtcaattgtgcgattttgcaccccat 210  Q
    |||||||||||||||||| ||||  |||| |||||||| |||||||||||||||    
T  1513 cttaattgcactttttcctctatcttttgccaattgtgtgattttgcaccccat 1566  T

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Target: scaffold0802 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 1120 - 1172
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcacccc 208  Q
    |||||||||||||||||||  |||  ||||| |||||||||||||||||||||    
T  1120 cttaattgcactttttccccctatcttttgttaattgtgcgattttgcacccc 1172  T

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Target: scaffold0802; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 1472 - 1420
Alignment:
Q  158 cttaattgcactttttccc--tatagtttgtcaattgtgcgattttgcacccc 208  Q
    |||||||||||||||||||  |||  |||| ||||||||||||||||||||||    
T  1472 cttaattgcactttttccccctatcttttgccaattgtgcgattttgcacccc 1420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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