View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18355_high_2 (Length: 556)

Name: NF18355_high_2
Description: NF18355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18355_high_2
NF18355_high_2
[»] chr1 (21 HSPs)
chr1 (199-524)||(21906021-21906346)
chr1 (199-523)||(27430928-27431252)
chr1 (202-524)||(34307583-34307905)
chr1 (199-524)||(48999050-48999370)
chr1 (198-524)||(5049095-5049422)
chr1 (199-524)||(22070145-22070470)
chr1 (198-524)||(48596489-48596807)
chr1 (350-521)||(17967464-17967636)
chr1 (353-524)||(25094960-25095132)
chr1 (208-524)||(9022867-9023181)
chr1 (353-469)||(23664295-23664411)
chr1 (198-260)||(36296357-36296418)
chr1 (199-260)||(26221341-26221401)
chr1 (199-260)||(42721895-42721955)
chr1 (199-260)||(1347107-1347167)
chr1 (199-260)||(28946200-28946260)
chr1 (199-259)||(23664516-23664576)
chr1 (200-260)||(9956586-9956645)
chr1 (156-200)||(19043477-19043521)
chr1 (443-524)||(12027671-12027754)
chr1 (199-260)||(32179178-32179238)
[»] chr3 (22 HSPs)
chr3 (197-524)||(19156734-19157060)
chr3 (199-524)||(53077104-53077430)
chr3 (199-523)||(27941653-27941976)
chr3 (197-524)||(15760500-15760826)
chr3 (197-524)||(25071276-25071610)
chr3 (318-524)||(10994286-10994493)
chr3 (293-524)||(52447877-52448110)
chr3 (291-524)||(24927987-24928212)
chr3 (298-524)||(1698158-1698386)
chr3 (197-260)||(6025146-6025208)
chr3 (396-524)||(11640128-11640257)
chr3 (199-259)||(10994521-10994581)
chr3 (198-260)||(22917792-22917853)
chr3 (199-260)||(23045262-23045322)
chr3 (199-260)||(31885335-31885395)
chr3 (197-260)||(1420193-1420255)
chr3 (198-260)||(1424343-1424404)
chr3 (199-260)||(30376917-30376977)
chr3 (199-260)||(52447788-52447849)
chr3 (200-260)||(10993472-10993531)
chr3 (199-243)||(36640723-36640766)
chr3 (199-260)||(9467857-9467916)
[»] chr6 (21 HSPs)
chr6 (197-523)||(22012252-22012577)
chr6 (199-524)||(1603013-1603337)
chr6 (198-524)||(34043180-34043511)
chr6 (199-459)||(21442393-21442652)
chr6 (295-524)||(1422692-1422922)
chr6 (291-524)||(1131505-1131740)
chr6 (291-524)||(18675086-18675320)
chr6 (291-524)||(26213000-26213234)
chr6 (291-524)||(15059902-15060134)
chr6 (199-524)||(20990100-20990404)
chr6 (428-524)||(13758914-13759009)
chr6 (291-524)||(26817095-26817325)
chr6 (199-260)||(14677386-14677446)
chr6 (200-263)||(18674997-18675060)
chr6 (199-263)||(15059811-15059875)
chr6 (202-257)||(34040410-34040465)
chr6 (199-260)||(1131416-1131477)
chr6 (199-260)||(31475159-31475219)
chr6 (199-260)||(33516980-33517040)
chr6 (397-517)||(3229335-3229454)
chr6 (198-260)||(9534317-9534377)
[»] chr2 (27 HSPs)
chr2 (197-523)||(44314179-44314504)
chr2 (197-523)||(44322358-44322683)
chr2 (199-524)||(19685439-19685760)
chr2 (197-524)||(33015330-33015656)
chr2 (203-524)||(6221032-6221353)
chr2 (291-524)||(41826101-41826334)
chr2 (199-524)||(2553702-2554023)
chr2 (291-517)||(22576128-22576353)
chr2 (291-524)||(11199422-11199653)
chr2 (291-476)||(27861989-27862175)
chr2 (291-431)||(7443894-7444035)
chr2 (199-260)||(2565275-2565335)
chr2 (198-260)||(18781563-18781624)
chr2 (199-260)||(90715-90775)
chr2 (199-260)||(22576381-22576442)
chr2 (210-259)||(40709902-40709951)
chr2 (199-260)||(45277867-45277927)
chr2 (199-259)||(41826362-41826422)
chr2 (199-260)||(7880714-7880774)
chr2 (199-260)||(18582944-18583004)
chr2 (459-524)||(14903926-14903991)
chr2 (199-260)||(19674457-19674517)
chr2 (199-260)||(38696798-38696858)
chr2 (435-524)||(30386729-30386820)
chr2 (459-517)||(41302590-41302648)
chr2 (203-260)||(14903684-14903741)
chr2 (460-524)||(19091320-19091384)
[»] chr5 (24 HSPs)
chr5 (199-524)||(2676608-2676932)
chr5 (202-524)||(18888714-18889035)
chr5 (198-524)||(13382737-13383063)
chr5 (291-524)||(23962585-23962817)
chr5 (18-200)||(37161021-37161209)
chr5 (199-517)||(9409696-9410013)
chr5 (199-517)||(42879239-42879555)
chr5 (199-524)||(39537526-39537845)
chr5 (291-524)||(13490122-13490357)
chr5 (291-524)||(5578745-5578977)
chr5 (410-524)||(16040323-16040438)
chr5 (389-518)||(40583478-40583607)
chr5 (410-516)||(13826364-13826471)
chr5 (443-524)||(20892404-20892486)
chr5 (199-260)||(5579005-5579066)
chr5 (199-260)||(13490034-13490095)
chr5 (199-260)||(38490702-38490762)
chr5 (199-259)||(7849977-7850036)
chr5 (199-259)||(41869418-41869477)
chr5 (200-263)||(33922688-33922751)
chr5 (198-259)||(14652123-14652183)
chr5 (199-260)||(43324107-43324167)
chr5 (197-250)||(6950351-6950403)
chr5 (464-524)||(13821005-13821063)
[»] chr7 (30 HSPs)
chr7 (199-524)||(8389436-8389760)
chr7 (199-524)||(4539512-4539833)
chr7 (291-524)||(31072661-31072897)
chr7 (199-524)||(18667012-18667335)
chr7 (291-524)||(20394922-20395157)
chr7 (293-524)||(35478114-35478346)
chr7 (293-524)||(13753850-13754082)
chr7 (291-387)||(43824059-43824155)
chr7 (197-260)||(13753757-13753820)
chr7 (199-260)||(19312328-19312388)
chr7 (199-260)||(43823964-43824025)
chr7 (194-260)||(48238111-48238176)
chr7 (198-260)||(48636359-48636420)
chr7 (199-260)||(8069234-8069294)
chr7 (199-260)||(31072928-31072988)
chr7 (314-524)||(8114049-8114260)
chr7 (341-524)||(5770659-5770844)
chr7 (199-260)||(15680108-15680168)
chr7 (202-263)||(20395182-20395243)
chr7 (199-243)||(45446447-45446491)
chr7 (461-524)||(8604730-8604793)
chr7 (199-260)||(135357-135417)
chr7 (199-260)||(35478375-35478436)
chr7 (199-250)||(12379303-12379353)
chr7 (373-511)||(44733341-44733480)
chr7 (214-260)||(6189784-6189830)
chr7 (198-240)||(44733169-44733211)
chr7 (443-524)||(9420341-9420422)
chr7 (199-260)||(37549174-37549234)
chr7 (199-259)||(10016130-10016189)
[»] chr8 (23 HSPs)
chr8 (198-524)||(31597164-31597489)
chr8 (199-524)||(3762339-3762664)
chr8 (199-524)||(1981234-1981563)
chr8 (318-524)||(45117226-45117433)
chr8 (291-524)||(16729465-16729697)
chr8 (199-517)||(7973125-7973442)
chr8 (293-524)||(7263769-7264001)
chr8 (295-524)||(39905965-39906193)
chr8 (291-524)||(4432208-4432442)
chr8 (291-524)||(40971178-40971409)
chr8 (417-524)||(18327212-18327320)
chr8 (199-263)||(45117137-45117201)
chr8 (291-425)||(18327047-18327180)
chr8 (199-263)||(40971089-40971153)
chr8 (199-260)||(6927923-6927983)
chr8 (198-259)||(16729377-16729438)
chr8 (197-260)||(4432470-4432533)
chr8 (198-261)||(7264029-7264092)
chr8 (199-260)||(11995099-11995159)
chr8 (464-524)||(11648889-11648949)
chr8 (199-260)||(3509847-3509907)
chr8 (199-263)||(9137186-9137249)
chr8 (200-260)||(39905874-39905934)
[»] scaffold0093 (1 HSPs)
scaffold0093 (199-524)||(50565-50895)
[»] chr4 (25 HSPs)
chr4 (199-524)||(10095159-10095485)
chr4 (295-521)||(7413883-7414109)
chr4 (295-521)||(7459964-7460190)
chr4 (197-516)||(39480396-39480716)
chr4 (291-517)||(36213469-36213693)
chr4 (199-507)||(6261771-6262079)
chr4 (291-524)||(52458748-52458983)
chr4 (291-524)||(52460005-52460240)
chr4 (199-260)||(14192704-14192764)
chr4 (436-524)||(3665598-3665686)
chr4 (198-260)||(38052594-38052655)
chr4 (198-260)||(51337306-51337367)
chr4 (381-488)||(9922021-9922130)
chr4 (199-260)||(28143836-28143896)
chr4 (199-263)||(7414124-7414188)
chr4 (199-263)||(7460205-7460269)
chr4 (197-260)||(14033715-14033777)
chr4 (199-240)||(36213396-36213437)
chr4 (199-260)||(49242563-49242623)
chr4 (199-263)||(29283368-29283431)
chr4 (443-524)||(51758336-51758419)
chr4 (463-524)||(10142049-10142110)
chr4 (464-524)||(13957158-13957218)
chr4 (432-518)||(22594151-22594239)
chr4 (199-259)||(56367272-56367331)
[»] scaffold0308 (1 HSPs)
scaffold0308 (199-466)||(12287-12550)
[»] scaffold0016 (9 HSPs)
scaffold0016 (291-524)||(88244-88479)
scaffold0016 (291-524)||(88720-88955)
scaffold0016 (291-524)||(87769-88003)
scaffold0016 (291-524)||(89196-89430)
scaffold0016 (291-494)||(87326-87530)
scaffold0016 (199-260)||(88030-88091)
scaffold0016 (199-260)||(89456-89517)
scaffold0016 (199-260)||(88506-88567)
scaffold0016 (199-260)||(88982-89043)
[»] scaffold0601 (1 HSPs)
scaffold0601 (199-260)||(6428-6489)
[»] scaffold0743 (1 HSPs)
scaffold0743 (200-258)||(3684-3741)
[»] scaffold0116 (1 HSPs)
scaffold0116 (199-260)||(40460-40520)


Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 199 - 524
Target Start/End: Original strand, 21906021 - 21906346
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||         |||||||       |||||| |    
T  21906021 cagggccggccctagggcataggccgcgagtgcgacggcctagggtccatgccggtaggggg-cccaaaaagttttttaaggtaagggggtgtatataaa 21906119  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||    
T  21906120 attatttggatttcggggggtatatatagaaaaattctcttcaaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtctttttggc 21906219  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaa-aatttggttgttcttgataatatgctcaaa 497  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| ||    
T  21906220 ccttttagtgagatttgttatatatatcccatgtaacacaaaattttctatatacaccctcatataaaagaatttggttgttcttgataatatgctccaa 21906319  T
Q  498 attttattatcgaagaaattggtgata 524  Q
    | |||||||||||||||||||||||||    
T  21906320 aatttattatcgaagaaattggtgata 21906346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 199 - 523
Target Start/End: Complemental strand, 27431252 - 27430928
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  |          |||||||       ||||||||    
T  27431252 cagggctggccctagggcataggccgcgagtgtgacggcctaggacccatgccggtagggggtcca-attttttttttaaggtaagagggtgtatataga 27431154  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  27431153 aatatttggatttcgggagatatatatagaaaaattctcttcaaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtatttttggc 27431054  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatgctcaaa 497  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||    
T  27431053 ccttttagtgagatttactatatatatcccatgtaacacaaaattttctatatacaccctcctataaaaaaatttagttgttcttgataatatgctcaaa 27430954  T
Q  498 attttattatcgaagaaattggtgat 523  Q
    | ||||||||||||||||||||||||    
T  27430953 agtttattatcgaagaaattggtgat 27430928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 202 - 524
Target Start/End: Complemental strand, 34307905 - 34307583
Alignment:
Q  202 ggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatatagaaat 301  Q
    ||||||||||||| ||||||||||||||| |||||||||||| |||||||| ||||||| ||  ||         |||||||        ||||||||||    
T  34307905 ggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccgttagggggcccaaaaaaaaaatttaaggtaagggggtgcatatagaaat 34307807  T
Q  302 atttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggccct 401  Q
    |||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||    
T  34307806 atttggatttcggggggtatatatagaagaattctcttcaaaggtccaaactttgacatgataaaggaatgggctgacatctgttagtatttttggctct 34307707  T
Q  402 tttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatgctcaaaatt 500  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |    
T  34307706 tttagtgagatttgctatatatatcccatgtaacacaaaattttctatatacaccctcctataaaaaaaattggttgttcttgataatatgctcaaaaat 34307607  T
Q  501 ttattatcgaagaaattggtgata 524  Q
    ||||||||||||||||||||||||    
T  34307606 ttattatcgaagaaattggtgata 34307583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 199 - 524
Target Start/End: Original strand, 48999050 - 48999370
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||| |||||| |||||| ||  |||||         |||||||       ||||||||    
T  48999050 cagggtcggccatagggcataggccgcgagtgcgacggcctagggcccatgctggtaggagg--cccaaattttttttaaggtaagggggtgtatataga 48999147  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  48999148 aatatttggattttggggggtatatatagaaaagttctcttcaaagacccaaactttgacatgataaaggaatgggctgacatctgttagtatttttggc 48999247  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataatatgctcaaaa 498  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  48999248 ccttttagtgagatttgctatatatatcccatgtaacac--aattttctatatacaccctcctataaaaaatttggttgttcttgataatatgct-aaaa 48999344  T
Q  499 ttttattatcgaagaaattggtgata 524  Q
     |||||||||||||||||||||||||    
T  48999345 atttattatcgaagaaattggtgata 48999370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 198 - 524
Target Start/End: Original strand, 5049095 - 5049422
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatatag 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| ||         | ||||        |||||||    
T  5049095 acagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtaggggg-cccaaatttttttttacggtacgggggtgtatatag 5049193  T
Q  298 aaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcgg 397  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| | ||||||||||||| |||||| ||    
T  5049194 aaatatttggatttcgggg-gtatatatagaaaaattctcttcaaaggcccaaactttgacatgataaaggaattgactgacatctgttaatatttttgg 5049292  T
Q  398 cccttttagtgagatttgctatatatatct--catgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctc 494  Q
    |||||||||||||||||||||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  5049293 cccttttagtgagatttgctatatatatattccatgtaacacaaaattttctatatacaccctcctataaaaaaaattggttgttcttgataatatgctc 5049392  T
Q  495 aaaattttattatcgaagaaattggtgata 524  Q
    |||| |||||||||||||||||||||||||    
T  5049393 aaaaatttattatcgaagaaattggtgata 5049422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 199 - 524
Target Start/End: Original strand, 22070145 - 22070470
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||| ||| ||         ||| |||       ||||||||    
T  22070145 cagggccggccctagggcataggccgtgagtgcgacggcctagggcccatgccggtaggggg-cccaaaaaaaaaattaagataagggggtgtatataga 22070243  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||| | |    
T  22070244 aatatttggatttaggggggtgtatatagacaaattctctgcaaaggcccaaactttgacatgataaaggaatgggctaacatctgttagtatttttgac 22070343  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctcaaa 497  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||||| ||||||    
T  22070344 ccttttagtgagatttgctatatatattccatgtaacacaaaaatttctatatacatcctcctataaaaaaatttggttgttcttgataatatactcaaa 22070443  T
Q  498 attttattatcgaagaaattggtgata 524  Q
    | |||||||||||||||||||||||||    
T  22070444 aatttattatcgaagaaattggtgata 22070470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 198 - 524
Target Start/End: Complemental strand, 48596807 - 48596489
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatatag 297  Q
    ||||||||||||||| |||||||| |||||||| |||||||||| | ||||||| |||||||||||  ||         |||||||       |||||||    
T  48596807 acagggccggccctaaggcataggtcgcgagtgcgacggcctagagcccatgccagtagggggtcc--aaaaaaattttaaggtaagggggtgtatatag 48596710  T
Q  298 aaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcgg 397  Q
    ||||||||||||||| |||| ||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||    
T  48596709 aaatatttggatttcaggggatatatatagaaaaattctctgcaaaggcccaaactttgacatgataaaggaatgggctgatatctgttagtatttttgg 48596610  T
Q  398 cccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataatatgctcaaa 497  Q
     ||||||||||||||||| |||||||||| |||||||||||||  ||||  |||| |||||||||||||||||    |||||||||||||||||||||||    
T  48596609 tccttttagtgagatttgttatatatatcccatgtaacacaaatatttc--tatacaccctcctataaaaaat----ttgttcttgataatatgctcaaa 48596516  T
Q  498 attttattatcgaagaaattggtgata 524  Q
    | |||||||||||||||||| ||||||    
T  48596515 aatttattatcgaagaaatttgtgata 48596489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 350 - 521
Target Start/End: Complemental strand, 17967636 - 17967464
Alignment:
Q  350 aactttgacaagataaaggaatgggctgacatctgttagtattttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctat 449  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  17967636 aactttgacatgataaaggaatgggctgacatctgttagtatttttggcccttttagtgagatttgctatatatatctcatataacacaaaaatttctat 17967537  T
Q  450 atataccctcctataa-aaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtg 521  Q
    ||| |||||||||||| |||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  17967536 atacaccctcctataaaaaaaattggttgttcttgataatatgctaaaaaatttattatcgaagaaattggtg 17967464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 353 - 524
Target Start/End: Original strand, 25094960 - 25095132
Alignment:
Q  353 tttgacaagataaaggaatgggctgacatctgttagtattttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatata 452  Q
    ||||||| |||| || |||||||||| |||||||| | |||| |||| |||||| ||||||||||||||||||| |||| | ||||||  ||| ||||||    
T  25094960 tttgacatgatatagtaatgggctgaaatctgttaatgtttttggcctttttagagagatttgctatatatatcccatgcagcacaaatatttatatata 25095059  T
Q  453 taccctcctat-aaaaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
     |||||||||| |||||| ||||||| |||| ||||||||||| ||| ||||| |||||||||||||||||||    
T  25095060 caccctcctataaaaaaaattggttgatcttaataatatgctcgaaaatttatcatcgaagaaattggtgata 25095132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 208 - 524
Target Start/End: Original strand, 9022867 - 9023181
Alignment:
Q  208 ccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatatagaaatatttgg 307  Q
    ||||||||||||||||| ||||| || ||||||||| ||||||||||||||||  || ||         |||||||       |||||||||||||||||    
T  9022867 ccctagggcataggccgggagtgcgatggcctagggcccatgccggtaggggg--ccaaaaaaatttttaaggtaagggggtgtatatagaaatatttgg 9022964  T
Q  308 atttcggggggtatatatagaaaacttctcttcaaagg-cccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggcccttttag 406  Q
     |||  || |||||||||||  || ||||||  ||||| ||||||| |||||| ||| |||   || ||| |||| ||||| | |||| || |||||| |    
T  9022965 -tttttggaggtatatatagcgaaattctctgaaaaggccccaaacattgacatgatgaagtgttgagctaacatttgttaatgtttttggtccttttgg 9023063  T
Q  407 tgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatgctcaaaattttatt 505  Q
     |  |||||||||||||| | |||||| ||||||| |||| ||||| |||| |||||||     ||||||||||||| ||||| ||| ||||| ||||||    
T  9023064 cgcaatttgctatatataccccatgtagcacaaaaatttcaatatacaccc-cctataattttttttggttgttcttaataatgtgcgcaaaaatttatt 9023162  T
Q  506 atcgaagaaattggtgata 524  Q
    ||||||||||||| |||||    
T  9023163 atcgaagaaattgatgata 9023181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 469
Target Start/End: Complemental strand, 23664411 - 23664295
Alignment:
Q  353 tttgacaagataaaggaatgggctgacatctgttagtattttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatata 452  Q
    ||||||| |||| || |||||||||| |||||||| | |||| |||  |||||| |||||||| |||||||||| |||| | ||||||  ||||||||||    
T  23664411 tttgacatgatatagtaatgggctgaaatctgttaatgtttttggcatttttagagagatttgttatatatatcccatgcagcacaaatatttctatata 23664312  T
Q  453 taccctcctataaaaaa 469  Q
     ||| ||||||||||||    
T  23664311 caccttcctataaaaaa 23664295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 36296357 - 36296418
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  36296357 acagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 36296418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 26221341 - 26221401
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||||    
T  26221341 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgtcggtaggggg 26221401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 42721895 - 42721955
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  42721895 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 42721955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 1347167 - 1347107
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| ||||||  ||||||||    
T  1347167 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgctcgtaggggg 1347107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 28946260 - 28946200
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||||| |||||| ||||||||| || ||||||||||||||||    
T  28946260 cagggccggccctagg-cataggccacgagtgcgacggcctaaggcccatgccggtaggggg 28946200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 23664576 - 23664516
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggg 259  Q
    ||||||||||||||||||||| ||| |||||| |||||||||||| || || |||||||||    
T  23664576 cagggccggccctagggcatacgccacgagtgcgacggcctagggcccttgtcggtagggg 23664516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 9956586 - 9956645
Alignment:
Q  200 agggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||||||||||||| || |||||||||||| |||||||||||| ||||||  ||||||||    
T  9956586 agggccggccctagg-cacaggccgcgagtgcgacggcctagggcccatgctcgtaggggg 9956645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 19043477 - 19043521
Alignment:
Q  156 aacccacgctttagaggaaactccgccgtggggctgccattaaca 200  Q
    |||||||| |||| ||||||||||||||| |||||||||||||||    
T  19043477 aacccacgttttaaaggaaactccgccgtagggctgccattaaca 19043521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 524
Target Start/End: Original strand, 12027671 - 12027754
Alignment:
Q  443 tttctatatataccctcc-tataaaaaatttggttgttcttgataatatg-ctcaaaattttattatcgaagaaattggtgata 524  Q
    |||||||||| ||| ||| |||||||||  ||||||||||| |||||||| |  |||| |||||||||||| ||||||||||||    
T  12027671 tttctatatacaccgtccctataaaaaaaatggttgttcttaataatatgccaaaaaaatttattatcgaataaattggtgata 12027754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 32179238 - 32179178
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||  |||||  ||||||||    
T  32179238 cagggccggccttagg-cataggccgcgagtgcgacggcctagggctcatgctcgtaggggg 32179178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 206; Significance: 1e-112; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 197 - 524
Target Start/End: Original strand, 19156734 - 19157060
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatata 296  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||  |||||         |||||||       ||||||    
T  19156734 aacagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtaggggg--cccaaaaaatctttaaggtaagggggtgtatata 19156831  T
Q  297 gaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcg 396  Q
    ||||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  19156832 gaaatatttggatttcgggggatatatatagaaaaattctctgtaaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtatttttg 19156931  T
Q  397 gcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctca 495  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  19156932 gcccttttagtgagatttgctatatatatcccatgtaacacaaatatttctatatacaccctcctataaaaaaatttggttgttcttgataatatgctca 19157031  T
Q  496 aaattttattatcgaagaaattggtgata 524  Q
    ||| ||||||||||||||||||| |||||    
T  19157032 aaaatttattatcgaagaaattgatgata 19157060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 199 - 524
Target Start/End: Complemental strand, 53077430 - 53077104
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnn-tatatag 297  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||||||| ||||||| ||| ||         |||||||        |||||||    
T  53077430 cagggccggccctagggcataggccacgagtgcgacggcctagggcccatgccgataggggg-cccaaaataatttttaaggtaaggggggtgtatatag 53077332  T
Q  298 aaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcgg 397  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||||||| ||    
T  53077331 aaatatttggatttcggagggtatatatagaaaaattctcttcaaaggcccaaactctgacatgataaaggaatgagctgatatctgttagtatttttgg 53077232  T
Q  398 cccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatgctcaa 496  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  53077231 ctcttttagtgagatttgctatatatatcccatgtaacacaaaattttctatatacaccctcctataaaaaaatttggttgttcttgataatatgctcaa 53077132  T
Q  497 aattttattatcgaagaaattggtgata 524  Q
    || |||||||||||||||||||||||||    
T  53077131 aaatttattatcgaagaaattggtgata 53077104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 199 - 523
Target Start/End: Complemental strand, 27941976 - 27941653
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||  |||||         |||||||       ||||||||    
T  27941976 cagggccggccctagggcataagccgcgagtgcgacggcctagggcccatgccggtaggggg--cccaaaaagaatttaaggtaagggggtgtatataga 27941879  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||||||||||||||||| ||||  |||||| |||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| |||    
T  27941878 aatatttggatttcggggggtatatattgaaattttctctgcaaaggcccaaactttgacatgataaaggaatgagctgacatcagttagtatttttggc 27941779  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctcaaa 497  Q
    |||||||||||||||||||||||||||| ||||||||||||||   | |||||| |||||||| | ||||||||||||||||||||||||||||||||||    
T  27941778 ccttttagtgagatttgctatatatatcccatgtaacacaaaaaaatttatatacaccctcctgtaaaaaaatttggttgttcttgataatatgctcaaa 27941679  T
Q  498 attttattatcgaagaaattggtgat 523  Q
    | ||||||||||||||||||||||||    
T  27941678 aatttattatcgaagaaattggtgat 27941653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 197 - 524
Target Start/End: Original strand, 15760500 - 15760826
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatata 296  Q
    |||||||  |||||| |||||||||||||||||| |||||||||||| |||||||||||||||  ||| ||         |||||||       ||||||    
T  15760500 aacagggttggcccttgggcataggccgcgagtgcgacggcctagggcccatgccggtagggg--cccaaaattgtttttaaggtaagggggtgtatata 15760597  T
Q  297 gaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcg 396  Q
    ||||||||||||||||||||||||| ||||||||  |||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||||||||      
T  15760598 gaaatatttggatttcggggggtatgtatagaaatattctctgcaaaggcccaaactttgacatgttaaaggaatggactgacatctgttagtatttttt 15760697  T
Q  397 gcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctca 495  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  15760698 gcccttttagtgagatttgctatatatatcccatgtaacacaaaaatttctatatacaccctcctataaaaaaatttggttgatcttgataatatgctca 15760797  T
Q  496 aaattttattatcgaagaaattggtgata 524  Q
    ||| ||||||||||||||||| |||||||    
T  15760798 aaaatttattatcgaagaaataggtgata 15760826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 197 - 524
Target Start/End: Original strand, 25071276 - 25071610
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatata 296  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||| ||  ||         |||||||       ||||||    
T  25071276 aacagggccggccctagggcataggccgcgagtgcgacggcctagggcccaagccggtagggggcccaaaaaaaaaatttaaggtaaaggggtgtatata 25071375  T
Q  297 gaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcg 396  Q
    ||||||||||||||| ||||| | ||||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25071376 gaaatatttggatttaggggg-tgtatatagaaaa-ttctctgcaaaggcctaaactttgacatgataaaggaatgggctgacatctgttagtattttcg 25071473  T
Q  397 gcccttttagtgagatttgctatatata--------tctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataa 487  Q
    |||||||||||||||||||| |||||||        || |||||||||||||| |||||||||| |||||||||| |||||| |||||||||||||||||    
T  25071474 gcccttttagtgagatttgccatatatatcccatattcccatgtaacacaaaaatttctatatacaccctcctataaaaaaaattggttgttcttgataa 25071573  T
Q  488 tatgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||||||| |||||||||||||||||||||||||    
T  25071574 tatgctcaaaaatttattatcgaagaaattggtgata 25071610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 318 - 524
Target Start/End: Complemental strand, 10994493 - 10994286
Alignment:
Q  318 gtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggcccttttagtgagatttgct 417  Q
    |||||||||||||| || ||| |||||||||||||||| ||| ||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||    
T  10994493 gtatatatagaaaaattatctgcaaaggcccaaactttaacatgataaaggaatgggctgacatttgttaatatttttggctcttttagtgagatttgct 10994394  T
Q  418 atatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaat 516  Q
    ||||||||| |||||||||||||| |||||||||| |||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  10994393 atatatatcccatgtaacacaaaaatttctatatacaccctcctataaaaaaatttggttgttcttggtaatacgctcaaaaatttattatcgaagaaat 10994294  T
Q  517 tggtgata 524  Q
    ||||||||    
T  10994293 tggtgata 10994286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 293 - 524
Target Start/End: Original strand, 52447877 - 52448110
Alignment:
Q  293 tatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgtt-agtat 391  Q
    |||||||||||||||||||  |||||||||||||| ||| ||||||  |||||||||| |||||||| | || || |||||||||| |||| || | | |    
T  52447877 tatagaaatatttggattttagggggtatatatagtaaaattctctgaaaaggcccaatctttgacatgttatagaaatgggctgaaatctattaattgt 52447976  T
Q  392 tttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatat 490  Q
    |||  ||||| |||||||||||  |||||||||||  ||| | ||||||| |||||||||| ||||||||||||     ||||| ||||||| |||||||    
T  52447977 tttttgccctattagtgagattcactatatatatcctatgcagcacaaaaatttctatatacaccctcctataattttttttggatgttcttaataatat 52448076  T
Q  491 gctcaaaattttattatcgaagaaattggtgata 524  Q
    |||  ||| |||||||||||||||||| ||||||    
T  52448077 gcttgaaaatttattatcgaagaaattagtgata 52448110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 291 - 524
Target Start/End: Complemental strand, 24928212 - 24927987
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||||||||||||||||||  |||||||||||||| ||| |||||   ||||||         |||| | || || |||||||||| |||| ||| |     
T  24928212 tatatagaaatatttggattttagggggtatatatagtaaaattctcaaaaaaggc---------gacatgttatagaaatgggctgaaatctattaatg 24928122  T
Q  391 ttttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaa-tttggttgttcttgataata 489  Q
    ||||  |||||||||||||||||||||||||||||| |||| | ||||||  |||||||||| |||||||||||||||| ||||| | | ||| ||||||    
T  24928121 ttttttgcccttttagtgagatttgctatatatatcccatgcagcacaaatatttctatatacaccctcctataaaaaattttggctttacttaataata 24928022  T
Q  490 tgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||  ||| |||||||||||||||||| ||||||    
T  24928021 tgcttgaaaatttattatcgaagaaattagtgata 24927987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 298 - 524
Target Start/End: Original strand, 1698158 - 1698386
Alignment:
Q  298 aaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcc-caaactttgacaagataaaggaatgggctgacatctgttagtattttcg 396  Q
    |||||||||| ||| ||||||||| ||||| ||| |||  |  ||||||| ||||| |||||| ||| || |  |||||||| |||||||| | | || |    
T  1698158 aaatatttggttttgggggggtatttatagtaaaattcgttgaaaaggcctcaaacattgacatgatgaaaggctgggctgaaatctgttaatgtatttg 1698257  T
Q  397 gcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctca 495  Q
    |||||| | ||| ||||| ||||||||| | |||||| |||||||  ||||||||| || ||||||| |||||| ||||||||| || |||||||||| |    
T  1698258 gcccttctggtgcgatttcctatatataccccatgtagcacaaaaaattctatatacactctcctataaaaaaaattggttgttattaataatatgctaa 1698357  T
Q  496 aaattttattatcgaagaaattggtgata 524  Q
    | | |||||||||||||||||| ||||||    
T  1698358 agaatttattatcgaagaaattagtgata 1698386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 6025208 - 6025146
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  6025208 aacagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccggtaggggg 6025146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 524
Target Start/End: Complemental strand, 11640257 - 11640128
Alignment:
Q  396 ggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaa-aaatttggttgttcttgataatatgctc 494  Q
    ||||||||| | | ||||||||||||| |||||||||| |||| ||  ||||||||| |||||| |||||| |||||||||| || || || || |||||    
T  11640257 ggcccttttggcgtgatttgctatatacatctcatgtagcacataaacttctatatacaccctcatataaataaatttggttatttttaattatgtgctc 11640158  T
Q  495 aaaattttattatcgaagaaattggtgata 524  Q
    |||| ||||||| | || ||||||||||||    
T  11640157 aaaaatttattagcaaacaaattggtgata 11640128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 10994581 - 10994521
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggg 259  Q
    |||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| |||||    
T  10994581 cagggccggccctagggcataggccgcgagtgcgacggtctagggcccatgccggcagggg 10994521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 22917792 - 22917853
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||  ||||||||    
T  22917792 acagggccggccctagg-cataggccgcgagtgtgacggcctagggcccatgctcgtaggggg 22917853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 23045322 - 23045262
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  23045322 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 23045262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 31885395 - 31885335
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  31885395 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 31885335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 1420255 - 1420193
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||| ||||||  ||||||||    
T  1420255 aacagggccggccctagg-cataggctgcgagtgcgacggcctagggcccatgctcgtaggggg 1420193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 1424343 - 1424404
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||||  |||||||| | ||| |||||||||||| ||||||||||||||||    
T  1424343 acagggccggccctaggt-ataggccgggggtgcgacggcctagggcccatgccggtaggggg 1424404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 30376917 - 30376977
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||| ||||||| ||||||||||||||| |||||||||||| ||||||  ||||||||    
T  30376917 cagggccgaccctagg-cataggccgcgagtgcgacggcctagggcccatgctcgtaggggg 30376977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 52447788 - 52447849
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||| ||||||||||||||||||||| |||| |||| ||||| | || |||||||||||||    
T  52447788 cagggacggccctagggcataggccgcaagtgcgacgacctagagcccttgccggtaggggg 52447849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 260
Target Start/End: Complemental strand, 10993531 - 10993472
Alignment:
Q  200 agggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||| |||||||||| ||||||||| ||||||||||||||| || |||||||| |||||||    
T  10993531 agggtcggccctagg-cataggccgagagtgtgacggcctaaggcccatgccgttaggggg 10993472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 36640723 - 36640766
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctaggg 243  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||    
T  36640723 cagggccggccctagg-cataggccgcgagtgcgacggcctaggg 36640766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 9467916 - 9467857
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||| | ||| |||||||||||| ||||||| ||||||||    
T  9467916 cagggccggccctagg-cataggccggg-gtgcgacggcctagggcccatgcccgtaggggg 9467857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 201; Significance: 1e-109; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 197 - 523
Target Start/End: Complemental strand, 22012577 - 22012252
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatata 296  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||   ||         |||||||       ||||||    
T  22012577 aacagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggggtct--aaaaaaattttaaggtaagggggtgtatata 22012480  T
Q  297 gaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcg 396  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  22012479 gaaatatttggatttcagggggtatatatagaaattttctctgcaaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtatttttg 22012380  T
Q  397 gcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctca 495  Q
    ||| |||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| | ||||||||||||||||||||||||||||||||    
T  22012379 gcctttttagtgagatttgctatatatatcccatgtaacacaaaaatttctatatacaccctcctgtaaaaaaatttggttgttcttgataatatgctca 22012280  T
Q  496 aaattttattatcgaagaaattggtgat 523  Q
    ||| ||||||||||||||||||||||||    
T  22012279 aaaatttattatcgaagaaattggtgat 22012252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 199 - 524
Target Start/End: Original strand, 1603013 - 1603337
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  ||         |||||||       ||||||||    
T  1603013 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggggtcc--aaaaaatctttaaggtaagggggtgtatataga 1603110  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  1603111 aatatttggatttcgggggatatatatagaaaaattctctataaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtatttttggc 1603210  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctcaaa 497  Q
    |||||||||||||||| ||||||||||| |||||||||||||  |||||||||| |||||||||| |||||||||||||||||||||||||||||| |||    
T  1603211 ccttttagtgagattttctatatatatcccatgtaacacaaatatttctatatacaccctcctataaaaaaatttggttgttcttgataatatgcttaaa 1603310  T
Q  498 attttattatcgaagaaattggtgata 524  Q
    | |||||||||||||||||||||||||    
T  1603311 aatttattatcgaagaaattggtgata 1603337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 198 - 524
Target Start/End: Original strand, 34043180 - 34043511
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatatag 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||         |||||||       |||||||    
T  34043180 acagggccggccctagggcataggccgcgagtgtgacggcctagggcccatgccggtaggggg--cccaaaaattttttaaggtaagggagtgtatatag 34043277  T
Q  298 aaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcgg 397  Q
    |||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  |    
T  34043278 aaatatttggatttcgggggttatatatagaaaaattctctgtaaaggcccaaactttgacatgataaagaaatgggttgacatctgttagtatttttag 34043377  T
Q  398 cccttttagtgagatttgc------tatatatatctcatgtaacacaaaattttctatatataccctcctataaa-aaatttggttgttcttgataatat 490  Q
    || ||||||||||||||||      |||||||||| |||||||||||||  |||||||||| |||||||||||||    |||||||||||||||||||||    
T  34043378 ccattttagtgagatttgctatatatatatatatcccatgtaacacaaatatttctatatacaccctcctataaatttttttggttgttcttgataatat 34043477  T
Q  491 gctcaaaattttattatcgaagaaattggtgata 524  Q
    |||||||| |||||||||||||||||||||||||    
T  34043478 gctcaaaaatttattatcgaagaaattggtgata 34043511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 199 - 459
Target Start/End: Original strand, 21442393 - 21442652
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnn-tatatag 297  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||  |||||         ||| |||        |||||||    
T  21442393 cagggccggccctagagcataggccgcgagtgcgacggcctagggtccatgccggtaggggg--cccaaattttttttaagataagggaggtgtatatag 21442490  T
Q  298 aaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcgg 397  Q
    |||||||||||||||||||| ||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  21442491 aaatatttggatttcgggggatatatatagaaacattctctgcaaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtatttttgg 21442590  T
Q  398 cccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctc 459  Q
    ||||||||||||||||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  21442591 cccttttagtgagatttgctatatatatcccatgtaacacaaatatttctatatacaccctc 21442652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 295 - 524
Target Start/End: Original strand, 1422692 - 1422922
Alignment:
Q  295 tagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtatttt 394  Q
    ||||||||||||||||| ||||   |||||||| ||| ||||||  ||||||||||||||||||| |||| |||||| |||||| |||||||| | ||||    
T  1422692 tagaaatatttggattttggggataatatatagcaaaattctctgaaaaggcccaaactttgacatgatataggaattggctgaaatctgttaatgtttt 1422791  T
Q  395 cggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaa-aaatttggttgttcttgataatatgct 493  Q
     |||| |||||||||||||||||||||||||| |||| | ||||||| |||||||||| |||||||||||||    ||||||||||||| ||||||||||    
T  1422792 tggcctttttagtgagatttgctatatatatcccatgcagcacaaaactttctatatacaccctcctataaatttttttggttgttcttaataatatgct 1422891  T
Q  494 caaaattttattatcgaagaaattggtgata 524  Q
    | ||| |||||||||||||||||||||||||    
T  1422892 cgaaaatttattatcgaagaaattggtgata 1422922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 291 - 524
Target Start/End: Original strand, 1131505 - 1131740
Alignment:
Q  291 tatatagaaatatttggat-ttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagt 389  Q
    ||||||||||||||||||| || ||||||| | ||||||||| ||||||  |||||||||| |||| ||  |||| |||||||||||||  ||||||| |    
T  1131505 tatatagaaatatttggatattgggggggtgtgtatagaaaatttctctgaaaaggcccaatctttaacgtgatataggaatgggctgaattctgttaat 1131604  T
Q  390 attttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataat 488  Q
     |||| | ||||||||| ||||||||||||||||||| |||| | ||||||| |||||||||| |||||||||| |||||| |||||||||||| |||||    
T  1131605 gtttttgacccttttagagagatttgctatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaaattggttgttcttaataat 1131704  T
Q  489 atgctcaaaattttattatcgaagaaattggtgata 524  Q
    |||||| ||| |||||||||||||||||||||||||    
T  1131705 atgctcgaaaatttattatcgaagaaattggtgata 1131740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 291 - 524
Target Start/End: Original strand, 18675086 - 18675320
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||||||||||||  |||| ||||  ||||||||| ||||||||||  ||||||||||| ||||||| |||| |||||| |||||| |||||||| |     
T  18675086 tatatagaaatatttaaattttggggaatatatatagcaaacttctctgaaaaggcccaaattttgacatgatataggaattggctgaaatctgttaatg 18675185  T
Q  391 ttttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaa-aatttggttgttcttgataata 489  Q
    |||| |||||||||||||||||||||||||||||||  ||| |  |||||| |||||||||| | |||||| ||||| ||||||||||||||| ||||||    
T  18675186 tttttggcccttttagtgagatttgctatatatatcctatgcagtacaaaaatttctatatacatcctcctgtaaaacaatttggttgttcttaataata 18675285  T
Q  490 tgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||| ||| |||||  ||||||||||||||||||    
T  18675286 tgctcgaaaatttatcgtcgaagaaattggtgata 18675320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 291 - 524
Target Start/End: Complemental strand, 26213234 - 26213000
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggccc-aaactttgacaagataaaggaatgggctgacatctgttagt 389  Q
    |||||||||||||||   |||  |||||||||||||| ||| ||||||  |||| ||| |||| |||||| ||||||||  || ||||| |||||||| |    
T  26213234 tatatagaaatatttaatttttagggggtatatatagcaaaattctctgaaaagaccccaaacattgacatgataaagggctgagctgaaatctgttaat 26213135  T
Q  390 attttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataata 489  Q
    ||||| ||||| | | | | ||||||||||||||||| ||||||  |||||  |||||||||| ||||| |||||||||| |||| | ||||||||||||    
T  26213134 atttttggcccgtctggcgcgatttgctatatatatcccatgtagtacaaatatttctatatacaccctactataaaaaaattggctattcttgataata 26213035  T
Q  490 tgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||||||||||||||||||||||||| |||||    
T  26213034 tgctcaaaattttattatcgaagaaattgatgata 26213000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 291 - 524
Target Start/End: Original strand, 15059902 - 15060134
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    ||||||||||||||||| |||  |||| ||||||||| ||| ||||||  |||  | ||||| |||||| ||| ||||  | |||||| || |||||       
T  15059902 tatatagaaatatttggttttttggggttatatatagtaaaattctctaaaaaacctcaaacattgacatgatgaagggtttggctgaaatttgttaagg 15060001  T
Q  391 ttttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataatat 490  Q
    |||| ||||||||| | | |||| |||||||||| |  ||||| ||| |||||| ||||||| ||||||||||||||||||||||||||||| ||||| |    
T  15060002 tttttggcccttttggcgtgattcgctatatatacccaatgtagcacgaaattt-ctatatacaccctcctataaaaaatttggttgttcttaataatgt 15060100  T
Q  491 gctcaaaattttattatcgaagaaattggtgata 524  Q
    |||||||  ||||||  |||||| ||||||||||    
T  15060101 gctcaaatatttattgacgaagacattggtgata 15060134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 199 - 524
Target Start/End: Original strand, 20990100 - 20990404
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||   |||||         || |||        | ||||||    
T  20990100 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccttgccggtagggg---cccaaattttttttaatgta--ggggtgtttataga 20990194  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    |||||||||||||  |||||||||||||| ||  ||||||  |||||||||| |||||||| | || || |||||||||| |||| ||                
T  20990195 aatatttggattttagggggtatatatagtaacattctctgaaaaggcccaatctttgacatgttatagaaatgggctgaaatctatt------------ 20990282  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaat-ttggttgttcttgataatatgctcaaa 497  Q
         |||||||||| |||||||||||  |||| | ||||||| |||||||||| ||| ||||||||||||  |||||||||||| ||||||||||  ||    
T  20990283 -----tagtgagattcgctatatatattccatgcagcacaaaaatttctatatacaccatcctataaaaaaaattggttgttcttaataatatgcttgaa 20990377  T
Q  498 attttattatcgaagaaattggtgata 524  Q
    | |||||||||||||||||| ||||||    
T  20990378 aatttattatcgaagaaattagtgata 20990404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 428 - 524
Target Start/End: Complemental strand, 13759009 - 13758914
Alignment:
Q  428 catgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
    |||||| ||||||| |||||||||| ||||||  |||||||| | |||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  13759009 catgtagcacaaaaatttctatatacaccctctaataaaaaaat-ggttgttcttaataatatgctcaaaaatttattatcgaagaaattggtgata 13758914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 524
Target Start/End: Original strand, 26817095 - 26817325
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggccc-aaactttgacaagataaaggaatgggctgacatctgttagt 389  Q
    |||||||||||||||| |||| |||||||| |||||| ||| ||||||  |||||||  |||| | |||| ||| || |  |||||||| |||||||| |    
T  26817095 tatatagaaatatttg-attttggggggtaaatatagcaaaattctctggaaaggccttaaacatggacatgatgaatggctgggctgaaatctgttaat 26817193  T
Q  390 attttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataata 489  Q
     |||| |||| |||||  | ||||| ||||||||| |  ||||| ||||||  |||||||||| ||||| ||| ||||||  |   ||||||| ||||      
T  26817194 gtttttggccattttaacgtgattttctatatatacccaatgtagcacaaatatttctatatacacccttctaaaaaaaaaat---tgttcttaataagg 26817290  T
Q  490 tgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||||| ||||||||||||||||||| |||||    
T  26817291 tgctcaaaaatttattatcgaagaaattgatgata 26817325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 14677386 - 14677446
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  14677386 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccggtaggggg 14677446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 18674997 - 18675060
Alignment:
Q  200 agggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtcc 263  Q
    ||||||||||||| ||||||||||||| ||| |||||||||||| || ||||||||||||||||    
T  18674997 agggccggccctaaggcataggccgcgggtgcgacggcctagggcccttgccggtagggggtcc 18675060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 15059811 - 15059875
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtcc 263  Q
    ||||||||||||||||||||| |||| |||||  ||||||||||| ||||| |||||||||||||    
T  15059811 cagggccggccctagggcatatgccgggagtgcaacggcctagggcccatgtcggtagggggtcc 15059875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 34040465 - 34040410
Alignment:
Q  202 ggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagg 257  Q
    ||||||||||||||||||| || |||||| |||||||||||| |||||||||||||    
T  34040465 ggccggccctagggcatagaccacgagtgcgacggcctagggcccatgccggtagg 34040410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 1131416 - 1131477
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||||||||||||  ||||| |||||||||| | || |||||||||||||    
T  1131416 cagggccggccctagggcataggccaagagtgcgacggcctagagcccttgccggtaggggg 1131477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 31475219 - 31475159
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| ||||||  ||||||||    
T  31475219 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgctcgtaggggg 31475159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 33517040 - 33516980
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||||| ||||||  ||||||||||| ||||||||||||||||    
T  33517040 cagggccggccctagg-cataggccacgagtgcaacggcctagggcccatgccggtaggggg 33516980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 517
Target Start/End: Complemental strand, 3229454 - 3229335
Alignment:
Q  397 gcccttttagtgagatttgctatatata-tctcatgtaacacaaaattttctatatataccctc-ctataaaa-aatttggttgttcttgataatatgct 493  Q
    ||||||||||||||||||| |||||||| |||| | |||||||||  ||||    ||||||||| |||||||| || |||||| ||||| ||||| |||     
T  3229454 gcccttttagtgagatttgttatatatactctcgtataacacaaaggtttc----tataccctctctataaaataaattggtttttcttaataatgtgcc 3229359  T
Q  494 caaaattttattatcgaagaaatt 517  Q
     |||| ||||||||||||||||||    
T  3229358 aaaaaatttattatcgaagaaatt 3229335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 9534377 - 9534317
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| || ||||||| ||||||||    
T  9534377 acagggccggccctagg-cataggccgcgagtgcgacggcctaagg-ccatgcccgtaggggg 9534317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 201; Significance: 1e-109; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 197 - 523
Target Start/End: Complemental strand, 44314504 - 44314179
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatata 296  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||   ||         |||||||       ||||||    
T  44314504 aacagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggggtct--aaaaaaattttaaggtaagggggtgtatata 44314407  T
Q  297 gaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcg 396  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  44314406 gaaatatttggatttcagggggtatatatagaaattttctctgcaaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtatttttg 44314307  T
Q  397 gcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctca 495  Q
    ||| |||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| | ||||||||||||||||||||||||||||||||    
T  44314306 gcctttttagtgagatttgctatatatatcccatgtaacacaaaaatttctatatacaccctcctgtaaaaaaatttggttgttcttgataatatgctca 44314207  T
Q  496 aaattttattatcgaagaaattggtgat 523  Q
    ||| ||||||||||||||||||||||||    
T  44314206 aaaatttattatcgaagaaattggtgat 44314179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 197 - 523
Target Start/End: Complemental strand, 44322683 - 44322358
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatata 296  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||   ||         |||||||       ||||||    
T  44322683 aacagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggggtct--aaaaaaattttaaggtaagggggtgtatata 44322586  T
Q  297 gaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcg 396  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  44322585 gaaatatttggatttcagggggtatatatagaaattttctctgcaaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtatttttg 44322486  T
Q  397 gcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctca 495  Q
    ||| |||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| | ||||||||||||||||||||||||||||||||    
T  44322485 gcctttttagtgagatttgctatatatatcccatgtaacacaaaaatttctatatacaccctcctgtaaaaaaatttggttgttcttgataatatgctca 44322386  T
Q  496 aaattttattatcgaagaaattggtgat 523  Q
    ||| ||||||||||||||||||||||||    
T  44322385 aaaatttattatcgaagaaattggtgat 44322358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 199 - 524
Target Start/End: Original strand, 19685439 - 19685760
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||         |||||||       ||||||||    
T  19685439 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtaggagg--cccaaattttttttaaggtaagggggtgtatataga 19685536  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||||||| ||||||||||||  ||    
T  19685537 aatatttggattttggggggtatatatagaaaatttctcttcaaagatccaaactttgacatgataaaggaatgggctgacatttgttagtattttttgc 19685636  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataatatgctcaaaa 498  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  19685637 ccttttagtgagatttgctatatatatcccatgtaacac--aattttctatatacaccctcctataaaaaatttggttgttcttgataatatgctaaaaa 19685734  T
Q  499 ttttattatcgaagaaattggtgata 524  Q
     |||||||||||||||||||||||||    
T  19685735 atttattatcgaagaaattggtgata 19685760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 197 - 524
Target Start/End: Complemental strand, 33015656 - 33015330
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatata 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||         |||||||       ||||||    
T  33015656 aacagggccggccctagggcataggccgcgagtgtgacggcctagggcccatgccggtaggggg--cccaaaatttttttaaggtaagggggtgtatata 33015559  T
Q  297 gaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcg 396  Q
    ||||||||||||||||||||| ||||||||||||| |||||   ||||||||||||||||||| | ||||| |||||||||||||||||||||||||| |    
T  33015558 gaaatatttggatttcgggggatatatatagaaaaattctcagtaaaggcccaaactttgacatggtaaagaaatgggctgacatctgttagtatttttg 33015459  T
Q  397 gcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatgctca 495  Q
    ||||||||||||||||||| |||||||||| |||||||||||||  |||||||||| |||||||||||| |||||||| |||||||||||||||||||||    
T  33015458 gcccttttagtgagatttgttatatatatcccatgtaacacaaatatttctatatacaccctcctataaaaaaatttgcttgttcttgataatatgctca 33015359  T
Q  496 aaattttattatcgaagaaattggtgata 524  Q
    ||| |||||||||||||||||||||||||    
T  33015358 aaaatttattatcgaagaaattggtgata 33015330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 203 - 524
Target Start/End: Original strand, 6221032 - 6221353
Alignment:
Q  203 gccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatatagaaata 302  Q
    ||||||||||| |||||||||||||||| ||||||||| || | ||||||||||||||  |||||         |||||||       ||||||||| ||    
T  6221032 gccggccctagagcataggccgcgagtgcgacggcctaaggcctatgccggtaggggg--cccaaaaaatctttaaggtaaggaggtgtatatagaagta 6221129  T
Q  303 tttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggccctt 402  Q
    ||||||||||||||| ||||||||||||| ||||||  |||||| |||||||||||| |||||||||||||||||||||||||||||||||| || ||||    
T  6221130 tttggatttcgggggatatatatagaaaaattctctgtaaaggctcaaactttgacatgataaaggaatgggctgacatctgttagtatttttgggcctt 6221229  T
Q  403 ttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat--aaaaaatttggttgttcttgataatatgctcaaaatt 500  Q
    |||||||||||| ||||||||||| |||||||||||||  |||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  6221230 ttagtgagattttctatatatatcccatgtaacacaaatatttctatatacaccctcctataaaaaaaatttggttgttcttgataatatgctcaaaaat 6221329  T
Q  501 ttattatcgaagaaattggtgata 524  Q
    ||||||||||||||||||||||||    
T  6221330 ttattatcgaagaaattggtgata 6221353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 291 - 524
Target Start/End: Complemental strand, 41826334 - 41826101
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||||||||||||||||||  |||||||||||||| ||| ||||||  |||||||||| |||||||| | || || |||||||||| |||| ||| |     
T  41826334 tatatagaaatatttggattttagggggtatatatagtaaaattctctgaaaaggcccaatctttgacatgttatagaaatgggctgaaatctattaatg 41826235  T
Q  391 ttttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataata 489  Q
    |||| | |||||||||||||||| |||||||||||| |||| | ||||||| |||||||||| |||||||||||| |||| |||||||||||| ||||||    
T  41826234 tttttg-cccttttagtgagattcgctatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaaattggttgttcttaataata 41826136  T
Q  490 tgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||  ||| |||||||||||||||||| ||||||    
T  41826135 tgcttgaaaatttattatcgaagaaattagtgata 41826101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 199 - 524
Target Start/End: Original strand, 2553702 - 2554023
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| || ||||||||||||  ||| |          ||||||        ||||||||    
T  2553702 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgccggtagggg--cccaattttttttttaaggta--ggggtatatataga 2553797  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    |||||||||||||  |||||||||||||| ||| ||||||  |||||||||| |||||||| | || || |||||||||| |||| ||| | |||| | |    
T  2553798 aatatttggattttagggggtatatatagtaaaattctctgaaaaggcccaatctttgacatgttatagaaatgggctgaaatctattaatgtttttg-c 2553896  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctcaaa 497  Q
    ||||||||||||||| |||||||||||| |||| | ||||||| |||||||||| |||||||||| |||||| |||||||||||| ||||||| ||  ||    
T  2553897 ccttttagtgagattcgctatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaaattggttgttcttaataatatacttgaa 2553996  T
Q  498 attttattatcgaagaaattggtgata 524  Q
    | |||||||||||||||||| ||||||    
T  2553997 aatttattatcgaagaaattagtgata 2554023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 291 - 517
Target Start/End: Complemental strand, 22576353 - 22576128
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||||||||||||||||||  ||||||| |||||| ||| ||||||  ||||||||||||||||||| ||||||| |||||||||| |||||||| |     
T  22576353 tatatagaaatatttggatttgtgggggtacatatagcaaaattctctg-aaaggcccaaactttgacatgataaagcaatgggctgaaatctgttaatg 22576255  T
Q  391 ttttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaattt-ggttgttcttgataata 489  Q
    | || |||| | |||||||||||| ||||||||||| |||||   |||||  |||||||||| ||||||||||||  | ||| |||||||||| ||||||    
T  22576254 tgtttggcc-tcttagtgagatttactatatatatcccatgtggtacaaatatttctatatacaccctcctataattatttttggttgttcttaataata 22576156  T
Q  490 tgctcaaaattttattatcgaagaaatt 517  Q
    ||||||||| ||||||||||||||||||    
T  22576155 tgctcaaaaatttattatcgaagaaatt 22576128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 291 - 524
Target Start/End: Complemental strand, 11199653 - 11199422
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    ||||||||||||||||||||| ||||| ||||||||| ||| ||||||  ||||||||||||||||||| |||||| || | |||||| |||||||| |     
T  11199653 tatatagaaatatttggattttggggg-tatatatagcaaaattctctg-aaaggcccaaactttgacatgataaaagactaggctgaaatctgttattg 11199556  T
Q  391 ttttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataatat 490  Q
    |||| ||||||||||  ||||||| ||||||||| | |||||| || |||  |||||||||| || ||||| ||     ||| ||||||||| |||||||    
T  11199555 tttttggcccttttaacgagattttctatatataccacatgtagcataaatatttctatatacactctcctctatttttttttgttgttcttaataatat 11199456  T
Q  491 gctcaaaattttattatcgaagaaattggtgata 524  Q
    ||| |||| |||||||||||||||||| ||||||    
T  11199455 gctaaaaaatttattatcgaagaaattagtgata 11199422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 291 - 476
Target Start/End: Complemental strand, 27862175 - 27861989
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagt- 389  Q
    |||||| |||||||||||||| ||||||||||||||| ||| ||| ||  ||||||||||||||||| | |||| || ||| |||||| ||||| || |     
T  27862175 tatataaaaatatttggattttggggggtatatatagtaaaattcactgaaaaggcccaaactttgatatgatatagaaataggctgaaatctggtaatg 27862076  T
Q  390 attttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaa-aatttggtt 476  Q
     ||||  |||||||||||| ||||| ||||||||||| |||| | ||||||| |||||||||| |||||||||||||| |||||||||    
T  27862075 tttttttgcccttttagtgcgattttctatatatatcccatgcagcacaaaa-tttctatatacaccctcctataaaataatttggtt 27861989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 291 - 431
Target Start/End: Original strand, 7443894 - 7444035
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagt- 389  Q
    |||||| |||||||||||||| || |||||||||||| ||| ||| |   ||||||||||||||||| | |||| ||||||||||||| |||||||| |     
T  7443894 tatataaaaatatttggattttggtgggtatatatagcaaaattcaccgaaaaggcccaaactttgatatgatataggaatgggctgaaatctgttaatg 7443993  T
Q  390 attttcggcccttttagtgagatttgctatatatatctcatg 431  Q
     ||||  |||||||||||  ||||||||||||||||| ||||    
T  7443994 tttttttgcccttttagttcgatttgctatatatatcccatg 7444035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 2565275 - 2565335
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  2565275 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccggtaggggg 2565335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 18781624 - 18781563
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  18781624 acagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 18781563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 90775 - 90715
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  90775 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 90715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 22576442 - 22576381
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||||| |||||||||||||||||  ||||| |||||||||||| ||||||||||||||||    
T  22576442 cagggccagccctagggcataggccatgagtgcgacggcctagggcccatgccggtaggggg 22576381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 40709951 - 40709902
Alignment:
Q  210 ctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggg 259  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  40709951 ctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggg 40709902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 45277927 - 45277867
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  45277927 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 45277867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 41826422 - 41826362
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggg 259  Q
    ||||||||||||||||||||||||| |||||  |||||||||||| || ||||||||||||    
T  41826422 cagggccggccctagggcataggccacgagtacgacggcctagggcccttgccggtagggg 41826362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 7880774 - 7880714
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||||| |||||| |||||||||||| |||||||| |||||||    
T  7880774 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccgttaggggg 7880714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 18583004 - 18582944
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| ||||||  ||||||||    
T  18583004 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgctcgtaggggg 18582944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 459 - 524
Target Start/End: Original strand, 14903926 - 14903991
Alignment:
Q  459 cctataaaaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||||||| |||||||||||| ||||| |||  ||||  ||||||||||||||||| ||||||    
T  14903926 cctataaaaaaattggttgttcttaataatgtgccaaaaaaattattatcgaagaaatttgtgata 14903991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 19674457 - 19674517
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||| | | |||| |||||||||||| ||||||||||||||||    
T  19674457 cagggccggccctagg-cataggtcacaagtgcgacggcctagggcccatgccggtaggggg 19674517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 38696798 - 38696858
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||| ||||||  ||||||||    
T  38696798 cagggccggccctagg-cataggctgcgagtgcgacggcctagggcccatgctcgtaggggg 38696858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 524
Target Start/End: Original strand, 30386729 - 30386820
Alignment:
Q  435 cacaaaattttctatatataccct-cctata-aaaaatttggttgttcttgataatatgctcaaaat-tttattatcgaagaaattggtgata 524  Q
    |||||||||||||||||| ||||| |||||| ||| |||||||||||||| ||||| ||| |||||| | |||||| ||||||||| ||||||    
T  30386729 cacaaaattttctatatacaccctccctatacaaagatttggttgttcttaataatgtgc-caaaatatatattattgaagaaatttgtgata 30386820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 517
Target Start/End: Complemental strand, 41302648 - 41302590
Alignment:
Q  459 cctataaaaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaatt 517  Q
    ||||||||||||||| || ||||| ||||| |||  |||| ||||||||||||||||||    
T  41302648 cctataaaaaatttgatttttctttataatgtgccaaaaaatttattatcgaagaaatt 41302590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 14903684 - 14903741
Alignment:
Q  203 gccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||| ||||||||| | ||| ||||||||| || || |||||||||||||    
T  14903684 gccggccctaggccataggccgggggtgcgacggcctatggcccttgccggtaggggg 14903741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 524
Target Start/End: Complemental strand, 19091384 - 19091320
Alignment:
Q  460 ctataaaaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||| ||||||||||||||||| ||||| ||   |||| |||||||||||| |||||| |||||    
T  19091384 ctatagaaaatttggttgttcttaataatgtgtcaaaaaatttattatcgaaaaaattgatgata 19091320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 199 - 524
Target Start/End: Original strand, 2676608 - 2676932
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||  |||||         |||||||       ||||||||    
T  2676608 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtaggggg--cccaaaaaatctttaaggtaagggggtgtatataga 2676705  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  2676706 aatatttggatttcgggggatatatatagaaaaattctctataaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtatttttggc 2676805  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctcaaa 497  Q
    |||||||||||||||| ||||||||||| |||||||||||||  |||||||||| |||||||||| |||||||||||||||||||||||||||||| |||    
T  2676806 ccttttagtgagattttctatatatatcccatgtaacacaaatatttctatatacaccctcctataaaaaaatttggttgttcttgataatatgcttaaa 2676905  T
Q  498 attttattatcgaagaaattggtgata 524  Q
    | |||||||||||||||||||||||||    
T  2676906 aatttattatcgaagaaattggtgata 2676932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 202 - 524
Target Start/End: Original strand, 18888714 - 18889035
Alignment:
Q  202 ggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatatagaaat 301  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| | | ||         |||||||       |||||||||||    
T  18888714 ggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtaggggg-ctcaaaaaaaaatttaaggtaagggggtgtatatagaaat 18888812  T
Q  302 atttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggccct 401  Q
    |||||||||| ||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||    
T  18888813 atttggatttaggggg-tgtatatagaaaacttctctgcaaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtattttttgccct 18888911  T
Q  402 tttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctcaaaatt 500  Q
    |||||||||||||| || ||||||| |||||||||||||| |||||||||| |||||||||| |||||| |||||||||||||||||||||||||||| |    
T  18888912 tttagtgagatttgttagatatatcccatgtaacacaaaaatttctatatacaccctcctataaaaaaaattggttgttcttgataatatgctcaaaaat 18889011  T
Q  501 ttattatcgaagaaattggtgata 524  Q
    ||||||||||||||||| ||||||    
T  18889012 ttattatcgaagaaatttgtgata 18889035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 198 - 524
Target Start/End: Complemental strand, 13383063 - 13382737
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatatag 297  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| ||||||| ||| ||         |||||||        ||||||    
T  13383063 acagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccgttaggggg-cccaaaattttttttaaggtaagggggtgcatatag 13382966  T
Q  298 aaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcgg 397  Q
    |||||||||||||| | ||| ||||||||||| | |||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||| ||    
T  13382965 aaatatttggattttgagggatatatatagaagaattctcttcaaaggctcaaactttgacatgataaaggaatgagctgacatctgttagtatttttgg 13382866  T
Q  398 cccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa--aaaatttggttgttcttgataatatgctca 495  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  13382865 cccttttagtgagatttgctatatatatcccatgtaacacaaaattttctatatacaccctcctataaaaaaaaattggttgttcttgataatatgctca 13382766  T
Q  496 aaattttattatcgaagaaattggtgata 524  Q
    ||| ||||||||| |||||||||||||||    
T  13382765 aaaatttattatctaagaaattggtgata 13382737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 291 - 524
Target Start/End: Original strand, 23962585 - 23962817
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||| | ||||||||||||||||||||| ||||||    
T  23962585 tatatagaaatatttggatttcggggggtatatataaaaaa-ttctctgcaaaggcccaaactttgacatgctaaaggaatgggctgacatctattagta 23962683  T
Q  391 ttttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaa-aatttggttgttcttgataata 489  Q
    || | | |||||||||||||||||||||||||||||  ||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  23962684 ttgttg-cccttttagtgagatttgctatatatatccaatgtaacacaaacatttctatatacaccctcctataaaaaaatttggttgttcttgataata 23962782  T
Q  490 tgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||||| |||||||||||||||||||||||||    
T  23962783 tgctcaaaaatttattatcgaagaaattggtgata 23962817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 37161021 - 37161209
Alignment:
Q  18 attaaagctatcacaacttttaattcatctaaattcccttcatacaaccaccaacttgatgtatatatattatttggaaacaactgtttgagaccctctg 117  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  37161021 attaaagctatcgcaacttttaattcatctaaattcccttcatacaaccaccaacttgatgtgtatatattatttagaaacaactgtttgagaccctctg 37161120  T
Q  118 ccgataacagaaagagaaatggtgacaaagggtcacc------caacccacgctttagaggaaactccgccgtggggctgccattaaca 200  Q
    |||  ||||||||||||||||||||||||||||||||      |||||||||||||||||||||||| |||||||||||||||||||||    
T  37161121 ccgccaacagaaagagaaatggtgacaaagggtcaccctgccgcaacccacgctttagaggaaactctgccgtggggctgccattaaca 37161209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 199 - 517
Target Start/End: Complemental strand, 9410013 - 9409696
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||  ||         |||||         ||||||||    
T  9410013 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgtcggtagggggtcca-aaagtttttttaaggtg-tagggggtatataga 9409916  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||| ||||||||||||||| ||| || |||  ||||||| ||||||||||| |||||||||||||||||| |||||||| | |||| |||    
T  9409915 aatatttggattttggggggtatatatagcaaaattatctgaaaaggcctaaactttgacatgataaaggaatgggctgaaatctgttaatgtttttggc 9409816  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatgctcaaa 497  Q
    ||||||||||||||||  |||||||||| |||||  ||||||  |||||||||| ||||||||||||     ||||||||||||| |||||||||| |||    
T  9409815 ccttttagtgagatttattatatatatcccatgtggcacaaatatttctatatacaccctcctataattttttttggttgttcttaataatatgctaaaa 9409716  T
Q  498 attttattatcgaagaaatt 517  Q
    | ||||||||||||||||||    
T  9409715 aatttattatcgaagaaatt 9409696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 199 - 517
Target Start/End: Original strand, 42879239 - 42879555
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||  ||| ||         |||||         ||||||||    
T  42879239 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggg--cccaaaagtttttttaaggtg-tagggtgtatataga 42879335  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    |||||||||||||  |||||||||||||| ||| || |||  ||||||||||||||||| | |||||||||||||||||| |||||||| | |||| |||    
T  42879336 aatatttggattttagggggtatatatagcaaaattatctgaaaaggcccaaactttgagatgataaaggaatgggctgaaatctgttaatgtttttggc 42879435  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatgctcaaa 497  Q
    |||||||||||||||| ||||||||||| |||||   |||||  |||||||||| ||||||||||||     |||| |||||||| ||||||||||||||    
T  42879436 ccttttagtgagatttactatatatatcccatgtggtacaaatatttctatatacaccctcctataactttttttgattgttcttaataatatgctcaaa 42879535  T
Q  498 attttattatcgaagaaatt 517  Q
    | ||||||||||||||||||    
T  42879536 aatttattatcgaagaaatt 42879555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 199 - 524
Target Start/End: Complemental strand, 39537845 - 39537526
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| |  |||||||||||||  |||||         ||||  |       ||| || |    
T  39537845 cagggccggccctagggcataggccgcaagtgcgacggcctagggcctttgccggtaggggg--cccaaattttttttaagg--agggggtgtatgtaaa 39537750  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||| ||||| ||||||||| ||| ||||||  |||||| |||||||||||| |||| |  |||||||||| |||||||  | |||| |||    
T  39537749 aatatttggattttggggg-tatatatagcaaaattctctgaaaaggcgcaaactttgacatgatataaaaatgggctgaaatctgtttatttttttggc 39537651  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaat-ttggttgttcttgataatatgctcaaa 497  Q
    ||||| |||||||||||||||||||||| |||| | |||||||||| ||||||| ||||||||||||||||  ||| |||||||| ||||||||||| ||    
T  39537650 ccttt-agtgagatttgctatatatatcccatgcagcacaaaattt-ctatatacaccctcctataaaaaacattgattgttcttaataatatgctcgaa 39537553  T
Q  498 attttattatcgaagaaattggtgata 524  Q
    | | |||||||||||||||||||||||    
T  39537552 aatatattatcgaagaaattggtgata 39537526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 291 - 524
Target Start/End: Original strand, 13490122 - 13490357
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||| |||||||||||||| |||||| |||||||| ||| ||| ||  |||||| |||| ||||| | |||| |||||||| |||| |||||||| |     
T  13490122 tatataaaaatatttggattttggggggaatatatagcaaaattcactgaaaaggctcaaaatttgatatgatataggaatggactgaaatctgttaatg 13490221  T
Q  391 ttttcg-gcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaa--aatttggttgttcttgataa 487  Q
    ||||   |||||||||||| ||||||||||||||||| |||| | |||| ||||| ||||| | ||||||||||||||  ||||||||||||||| ||||    
T  13490222 tttttttgcccttttagtgtgatttgctatatatatcccatgcagcacacaattt-ctatacacaccctcctataaaaaaaatttggttgttcttaataa 13490320  T
Q  488 tatgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  13490321 tatgctcgaaaatttattatcgaagaaattggtgata 13490357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 291 - 524
Target Start/End: Complemental strand, 5578977 - 5578745
Alignment:
Q  291 tatatagaaatatttggatttcgg-ggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagt 389  Q
    ||||||||||||||| ||||| || ||||||| ||||  ||| |||| |  ||||| ||||||||||| |||||| |||||||| |||| |||||||| |    
T  5578977 tatatagaaatatttagattttggaggggtatgtatatcaaaattctttgaaaaggtccaaactttgataagatataggaatggactgaaatctgttaat 5578878  T
Q  390 attttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataata 489  Q
     |||| ||||||||||| ||||| ||||||||||||| |||||| ||||||| | |||||||| |||||| | ||||||| ||||||||||   ||||||    
T  5578877 gtttttggcccttttagagagatatgctatatatatcccatgtagcacaaaaatatctatatacaccctcgtgtaaaaaaattggttgttc--aataata 5578780  T
Q  490 tgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||| ||| ||||||||| |||||||||||||||    
T  5578779 tgctcgaaaatttattatcaaagaaattggtgata 5578745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 410 - 524
Target Start/End: Complemental strand, 16040438 - 16040323
Alignment:
Q  410 gatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatgctcaaaattttattatc 508  Q
    ||||||||||||||||| |||||| ||||||  |||||||||| |||||||||||| |||| |||||||||||| ||||| ||||||||| ||| ||||     
T  16040438 gatttgctatatatatcccatgtagcacaaatatttctatataaaccctcctataaaaaaaattggttgttcttaataatgtgctcaaaaatttgttatt 16040339  T
Q  509 gaagaaattggtgata 524  Q
    ||||||||| ||||||    
T  16040338 gaagaaattagtgata 16040323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 389 - 518
Target Start/End: Original strand, 40583478 - 40583607
Alignment:
Q  389 tattttcggcccttttagtgagatttgctatatatat-ctcatgtaacacaaaattttctatatataccct-cctataaaaaatttggttgttcttgata 486  Q
    |||||| |||||||||   |||||||||||||||||| ||||  |||||||||| ||||||| |||||||| ||||||||||||||| || |||||||||    
T  40583478 tattttaggccctttttacgagatttgctatatatatcctcaaataacacaaaa-tttctatttataccctccctataaaaaatttgatttttcttgata 40583576  T
Q  487 atatgctcaaaattttattatcgaagaaattg 518  Q
    || ||   |||| |||||||||||||||||||    
T  40583577 atgtg-gaaaaaatttattatcgaagaaattg 40583607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 410 - 516
Target Start/End: Complemental strand, 13826471 - 13826364
Alignment:
Q  410 gatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaat-ttggttgttcttgataatatgctcaaaattttattatc 508  Q
    ||||||||||||||| | |||||| |||||   |||||||||| |||||| | |||||||  |||||||||||| ||||| ||||||||| |||| ||||    
T  13826471 gatttgctatatataccccatgtagcacaagtatttctatatacaccctcttgtaaaaaaaattggttgttcttaataatgtgctcaaaaatttactatc 13826372  T
Q  509 gaagaaat 516  Q
    ||||||||    
T  13826371 gaagaaat 13826364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 443 - 524
Target Start/End: Complemental strand, 20892486 - 20892404
Alignment:
Q  443 tttctatatataccctcctataaa-aaatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||||||||||||||||||||    |||| |||||||| |||||||||||||||  |||||||||||| |||||||||||    
T  20892486 tttctatatataccctcctataaatttttttgattgttcttaataatatgctcaaaaaattattatcgaagtaattggtgata 20892404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 5579066 - 5579005
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||| || |||||||||||||    
T  5579066 cagggccggccctagggcataggccacgagtgcgacgggctagggcccttgccggtaggggg 5579005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 13490034 - 13490095
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||| | ||||||||||||||| |||||||||||| || |||||||||||||    
T  13490034 cagggccggccctaagccataggccgcgagtgcgacggcctagggcccttgccggtaggggg 13490095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 38490702 - 38490762
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  38490702 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 38490762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 7849977 - 7850036
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggg 259  Q
    |||||||||||||||| |||||||| |||||| |||||||||||| |||||||||||||||    
T  7849977 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtagggg 7850036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 41869418 - 41869477
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggg 259  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| ||||||  |||||||    
T  41869418 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgctcgtagggg 41869477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 33922751 - 33922688
Alignment:
Q  200 agggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtcc 263  Q
    ||||||||||||||| ||||||||| | ||  |||||||||||||||  |||||||||||||||    
T  33922751 agggccggccctaggccataggccgggggtacgacggcctagggtcctagccggtagggggtcc 33922688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 14652183 - 14652123
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggg 259  Q
    |||||||||| |||||| |||||||| |||||| || ||||||||| |||||||||||||||    
T  14652183 acagggccggtcctagg-cataggccacgagtgcgatggcctagggcccatgccggtagggg 14652123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 43324167 - 43324107
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||| | ||| |||||||||||| ||||||| ||||||||    
T  43324167 cagggccggccctagg-cataggccgggggtgcgacggcctagggcccatgcccgtaggggg 43324107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 6950351 - 6950403
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgc 250  Q
    ||||||||||| |||||| |||||||| |||||| |||||||||||| ||||||    
T  6950351 aacagggccggtcctagg-cataggccacgagtgcgacggcctagggcccatgc 6950403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 524
Target Start/End: Complemental strand, 13821063 - 13821005
Alignment:
Q  464 aaaaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||||||||||||||| ||||| || ||||||  |||||||||||||||||| |||||    
T  13821063 aaaaaatttggttgttcttaataat-tg-tcaaaaaattattatcgaagaaattgatgata 13821005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 196; Significance: 1e-106; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 199 - 524
Target Start/End: Complemental strand, 8389760 - 8389436
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||  |||||         |||||||       ||||||||    
T  8389760 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtaggggg--cccaaaaaatctttaaggtaagggggtgtatataga 8389663  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||||||||| ||| ||||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  8389662 aatatttggatttcgggggatatgtatagaaaaattctctgtaaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtatttttggc 8389563  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatgctcaaa 497  Q
    ||||||||||| |||| ||||||||||| |||||||||||||  |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  8389562 ccttttagtgaaattttctatatatatcccatgtaacacaaatatttctatatacaccctcctataaaaaaatttggttgttcttgataatatgctcaaa 8389463  T
Q  498 attttattatcgaagaaattggtgata 524  Q
    | |||||||||||||||||||||||||    
T  8389462 aatttattatcgaagaaattggtgata 8389436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 199 - 524
Target Start/End: Original strand, 4539512 - 4539833
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||  |||||         |||||||       ||||||||    
T  4539512 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccgggaggggg--cccaaattttttttaaggtaagggggtgtatataga 4539609  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||| ||||| | ||||||||| | |||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||    
T  4539610 aatatttggatttaggggg-tgtatatagaataattctctgcaaaggcccaaactttgacatgctaaaggaatgggctgacatctgttagtatttttcgc 4539708  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctcaaa 497  Q
    |||||||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||| |||||| |||||||||||||||||||||||||||    
T  4539709 ccttttagtgagatttgctatatatatcccatgtaacacaaa--tttctatatacaccctcctataaaaaaaattggttgttcttgataatatgctcaaa 4539806  T
Q  498 attttattatcgaagaaattggtgata 524  Q
    | |||||||||||||||||||||||||    
T  4539807 aatttattatcgaagaaattggtgata 4539833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 291 - 524
Target Start/End: Complemental strand, 31072897 - 31072661
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    ||||||||||||||||||||| || |||||||||||||||  ||||||| |||||||||||| |||||| |||||||||||||| ||| |||||||||||    
T  31072897 tatatagaaatatttggattttggagggtatatatagaaacattctctttaaaggcccaaacattgacatgataaaggaatgggttgatatctgttagta 31072798  T
Q  391 ttttcggcccttttagtgagatttgctatat--atatctcatgtaacacaaaattttctatatataccctcctataaaaaa-tttggttgttcttgataa 487  Q
    |||| ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||    
T  31072797 tttttggcccttttagtgagatttgctatatatatatcccatgtaacacaaaattttctatatacacactcctataaaaaattttggttgttcttgataa 31072698  T
Q  488 tatgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  31072697 tatgctcaaaaatttattatcgaagaaatttgtgata 31072661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 199 - 524
Target Start/End: Original strand, 18667012 - 18667335
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| || ||||||||||||| ||| ||         ||||||        | ||||||    
T  18667012 cagggccggccctagggcataggccacgagtgcgacggcctagggcccttgccggtaggggg-cccaaatttttttttaaggta--ggggtgtttataga 18667108  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    |||||||||||||  |||||||||||||| ||  ||||||  |||||||||| |||||||| | || || |||||||||| |||| ||| | ||||  ||    
T  18667109 aatatttggattttagggggtatatatagtaacattctctgaaaaggcccaatctttgacatgttatagaaatgggctgaaatctattaatgttttttgc 18667208  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaa-aatttggttgttcttgataatatgctcaaa 497  Q
    ||| |||||||||||||||||||||||| |||| | ||||||| |||||||||| || ||||||||||| || |||||| ||||| ||||||||||  ||    
T  18667209 cctattagtgagatttgctatatatatcccatgcagcacaaaaatttctatatacactctcctataaaagaaattggttattcttaataatatgcttgaa 18667308  T
Q  498 attttattatcgaagaaattggtgata 524  Q
    | |||||||||||||||||| ||||||    
T  18667309 aatttattatcgaagaaattagtgata 18667335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 291 - 524
Target Start/End: Complemental strand, 20395157 - 20394922
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    ||||||||||||||||||||| ||||| ||| ||||| ||  ||||||  |||| |||||| ||||||| |||| ||||||||||||| |||||||| |     
T  20395157 tatatagaaatatttggattttggggg-tatgtatagcaacattctctgaaaagccccaaattttgacatgatataggaatgggctgaaatctgttaatg 20395059  T
Q  391 ttttcggcccttttagtgagatttgctatat--atatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataa 487  Q
    ||||||||| |||||| ||||||||||||||  ||||| |||| | ||||||  |||||||||| |||||||||| |||||| |||||||||| | ||||    
T  20395058 ttttcggcctttttagagagatttgctatatatatatcccatgcagcacaaatatttctatatacaccctcctataaaaaaaattggttgttcctaataa 20394959  T
Q  488 tatgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  20394958 tatgctcgaaaatttattatcgaagaaattggtgata 20394922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 293 - 524
Target Start/End: Complemental strand, 35478346 - 35478114
Alignment:
Q  293 tatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtatt 392  Q
    |||||||||||||||||||  |||||||||||||| ||| ||||||  ||||| |||| |||||||| | || || ||||| |||| |||| ||| | ||    
T  35478346 tatagaaatatttggattttagggggtatatatagtaaaattctctaaaaaggtccaatctttgacatgttatagaaatggactgaaatctattaatgtt 35478247  T
Q  393 ttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatg 491  Q
    ||  ||||| ||||||||||| |||||||||||| |||| | ||||||| |||||||||| |||||||||||| |||| |||||||||||| ||||||||    
T  35478246 ttttgccctattagtgagattcgctatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaaattggttgttcttaataatatg 35478147  T
Q  492 ctcaaaattttattatcgaagaaattggtgata 524  Q
    ||  ||| |||||||||||||||||| ||||||    
T  35478146 cttgaaaatttattatcgaagaaattagtgata 35478114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 293 - 524
Target Start/End: Original strand, 13753850 - 13754082
Alignment:
Q  293 tatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtatt 392  Q
    ||||||| |||||||||||  |||||||||||||| ||| ||||||  |||||||||| |||| ||| | || || |||| ||||| |||| ||| | ||    
T  13753850 tatagaagtatttggatttttgggggtatatatagtaaaattctctgaaaaggcccaatctttaacatgttatagaaatgagctgaaatctattaatgtt 13753949  T
Q  393 ttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatg 491  Q
    ||  ||||| |||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||||||||| |||||| |||||||||||| ||||||||    
T  13753950 ttttgccctattagtgagattcactatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaaattggttgttcttaataatatg 13754049  T
Q  492 ctcaaaattttattatcgaagaaattggtgata 524  Q
    ||  ||| ||||||||| |||||| | ||||||    
T  13754050 cttgaaaatttattatcaaagaaaatagtgata 13754082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 291 - 387
Target Start/End: Original strand, 43824059 - 43824155
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgtta 387  Q
    ||||||||||||||||||||| |||||||||||||||||   ||||||  ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  43824059 tatatagaaatatttggattttggggggtatatatagaagtattctctgaaaaggcccaaactttgacatgataaaggaatgggctgaaatctgtta 43824155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 13753757 - 13753820
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||||    
T  13753757 aacagggccggccctagggcataggccgcgagtgcgacagcctagggcccttgccggtaggggg 13753820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 19312388 - 19312328
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||    
T  19312388 cagggccggccctagg-cataggccgtgagtgcgacggcctagggtccatgccggtaggggg 19312328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 43823964 - 43824025
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||||||| ||||||||||||||| |||||| |||||||||||| ||||||||||||||||    
T  43823964 cagggccggtcctagggcataggccacgagtgcgacggcctagggcccatgccggtaggggg 43824025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 48238111 - 48238176
Alignment:
Q  194 attaacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||| |||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  48238111 attagcagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 48238176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 48636359 - 48636420
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  48636359 acagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 48636420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 8069234 - 8069294
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  8069234 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 8069294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 31072988 - 31072928
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||||||||    
T  31072988 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatcccggtaggggg 31072928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 314 - 524
Target Start/End: Complemental strand, 8114260 - 8114049
Alignment:
Q  314 gggggtatatatagaaaacttctcttcaaaggcc-caaactttgacaagataaaggaatgggctgacatctgttagtattttcggcccttttagtgagat 412  Q
    |||||||||||||| ||| ||| | | ||||||| ||||| |||||| ||| ||||  | ||||||  ||||||| | |||| |||||||||||    ||    
T  8114260 gggggtatatatagcaaagttcacat-aaaggcctcaaacattgacatgatgaagggcttggctgaagtctgttaatgtttttggcccttttagcacaat 8114162  T
Q  413 ttgctatatatatctcatgtaacacaaaattttctatatataccct-cctataaaaaatttggttgttcttgataatatgctcaaaattttattatcgaa 511  Q
    ||||||||| || | | | |||||||||  |||||||||| ||  | ||||||||||| |||||||||||| ||||| |||  ||||  |||||||||||    
T  8114161 ttgctatatgtaccccctataacacaaagatttctatatacacatttcctataaaaaaattggttgttcttaataatgtgccaaaaaaattattatcgaa 8114062  T
Q  512 gaaattggtgata 524  Q
     ||||||||||||    
T  8114061 taaattggtgata 8114049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 341 - 524
Target Start/End: Original strand, 5770659 - 5770844
Alignment:
Q  341 aaaggcccaaact-ttgacaagataaaggaatgggctgacatctgttagtattttcggcccttttagtgagatttgctatatatatctcatgtaacacaa 439  Q
    ||||||||||| | |||||| ||| |||| ||||||| |  ||||||| |||||| ||||||||| | |||||||  ||||||   ||| | ||||||||    
T  5770659 aaaggcccaaaatattgacatgatgaagggatgggctcaagtctgttaatattttaggcccttttggcgagatttattatatacc-ctcgtataacacaa 5770757  T
Q  440 aattttctatatataccctc-ctataaaa-aatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
    |  |||||||||| |||||  ||| |||| ||||||||| ||||| ||||| |||  |||| |||||||||||||||||||| ||||    
T  5770758 agatttctatatacaccctttctacaaaaaaatttggtttttcttaataatgtgccaaaaaatttattatcgaagaaattggcgata 5770844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 15680168 - 15680108
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| ||||||  ||||||||    
T  15680168 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgctcgtaggggg 15680108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 20395243 - 20395182
Alignment:
Q  202 ggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtcc 263  Q
    |||| ||||||||||||||||| |||||| |||||||||||  || ||||||||||||||||    
T  20395243 ggccagccctagggcataggccacgagtgcgacggcctaggtcccttgccggtagggggtcc 20395182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 45446491 - 45446447
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctaggg 243  Q
    |||||||||||||||| |||||||||||||||||||| |||||||    
T  45446491 cagggccggccctaggccataggccgcgagtgtgacgacctaggg 45446447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 461 - 524
Target Start/End: Complemental strand, 8604793 - 8604730
Alignment:
Q  461 tataaaaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
    |||||||||||||||||||||| ||||| |||   |||  ||||||||||||||||||||||||    
T  8604793 tataaaaaatttggttgttcttaataatgtgccagaaaaattattatcgaagaaattggtgata 8604730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 135357 - 135417
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||| || ||||| |||||||||||| ||||||| ||||||||    
T  135357 cagggccggccctagg-cataggtcgggagtgcgacggcctagggcccatgcctgtaggggg 135417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 35478436 - 35478375
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||  || ||| |||||||||    
T  35478436 cagggccagccctagggcataggccgcgagtgcgacggactaggacccttgctggtaggggg 35478375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 12379303 - 12379353
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgc 250  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||| ||||||    
T  12379303 cagggccggcccaagg-cataggccgcgagtgcgacggcctagggcccatgc 12379353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 511
Target Start/End: Original strand, 44733341 - 44733480
Alignment:
Q  373 ggctgacatctgttagtattttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaa-att 471  Q
    |||||| |||||||| | ||||  || ||||| | | |||||||| |||||| | || ||| ||||||  |||||||||| ||| | ||||||||| |||    
T  44733341 ggctgaaatctgttaatgttttttgctcttttggcgtgatttgctgtatataccccacgtagcacaaatatttctatatacaccatactataaaaagatt 44733440  T
Q  472 tggttgttcttgataatatgctcaaaattttattatcgaa 511  Q
    ||||||||||| ||||| || | |||| | ||||||||||    
T  44733441 tggttgttcttaataatgtgttgaaaaatctattatcgaa 44733480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 6189830 - 6189784
Alignment:
Q  214 ggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||||    
T  6189830 ggcataggccacgagtgcgacggcctagggcccatgccagtaggggg 6189784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 240
Target Start/End: Original strand, 44733169 - 44733211
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggccta 240  Q
    |||||||||||||||||||||||| || ||||| |||||||||    
T  44733169 acagggccggccctagggcataggtcgggagtgcgacggccta 44733211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 524
Target Start/End: Original strand, 9420341 - 9420422
Alignment:
Q  443 tttctatatataccctcctataaaaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||||||||||||||| ||||||| || ||||||||| | ||| |||   ||| ||||||||| ||||  |||||||||    
T  9420341 tttctatatataccctcctttaaaaaaattagttgttcttaaaaatgtgccataaaatttattatcaaagagcttggtgata 9420422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 37549234 - 37549174
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||  | ||| |||||||||||| ||||||| ||||||||    
T  37549234 cagggccggccctagg-cataggccaggggtgcgacggcctagggcccatgcccgtaggggg 37549174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 10016189 - 10016130
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggg 259  Q
    |||||||||||||||| |||||||||   ||| |||||||||||| ||||||| |||||||    
T  10016189 cagggccggccctagg-cataggccggaggtgcgacggcctagggcccatgcccgtagggg 10016130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 198 - 524
Target Start/End: Original strand, 31597164 - 31597489
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatatag 297  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| |||||||  | |||         |||||||        ||||||    
T  31597164 acagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccgttaggggg--ctcaaattttttttaaggtaagggggtgcatatag 31597260  T
Q  298 aaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcgg 397  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  31597261 aaatatttggatttcgggaggtatatatagaagaattctcttcaaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtatttttgg 31597360  T
Q  398 cccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaa--aatttggttgttcttgataatatgctca 495  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||    ||||||||||||||||||||||||||    
T  31597361 cccttttagtgagatttgctatatatatcccatgtaacacaaaagtttctatatacaccctcctataaaatttttttggttgttcttgataatatgctca 31597460  T
Q  496 aaattttattatcgaagaaattggtgata 524  Q
    ||| |||||||||||||||||||||||||    
T  31597461 aaaatttattatcgaagaaattggtgata 31597489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 199 - 524
Target Start/End: Original strand, 3762339 - 3762664
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| |          |||||||       ||||||||    
T  3762339 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtaggggg-cccaattttttttttaaggtaacggggtgtatataga 3762437  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||||  |||||||||||||||||  | ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  3762438 aatatttggatttcaaggggtatatatagaaaaaatttctgcaaaggcccaaactttgacaagataaaggaatgggttgacatctgttagtatttttggc 3762537  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctcaaa 497  Q
    ||||||||||||||||||||||||||||  ||||||||||||  |||||||| | |||||||||| |||||||||||||||||||||||||||||| |||    
T  3762538 ccttttagtgagatttgctatatatatcatatgtaacacaaatatttctatacacaccctcctataaaaaaatttggttgttcttgataatatgcttaaa 3762637  T
Q  498 attttattatcgaagaaattggtgata 524  Q
    | |||||||||||||||||||||||||    
T  3762638 aatttattatcgaagaaattggtgata 3762664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 199 - 524
Target Start/End: Original strand, 1981234 - 1981563
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||  | |||         |||||||       ||||||||    
T  1981234 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtaggggg--ctcaaattttttttaaggtaagggggtgtatataga 1981331  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    |||||||||||||| |||  ||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  1981332 aatatttggatttctgggaatatatatagaaacattctctgcaaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtatttttggc 1981431  T
Q  399 ccttttagtgagatttgctatatatatctc--atgtaacacaaaattttctatatataccctcctataaaaaa-tttggttgttcttgataatatgctca 495  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||  |||||||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  1981432 ccttttagtgagatttgctatatatatatcccatgtaacacaaatatttctatatacaccctcctataaaaaaatttggttgttcttgattatatgctca 1981531  T
Q  496 aaat---tttattatcgaagaaattggtgata 524  Q
    |||    | |||||||||||||||||||||||    
T  1981532 aaaaaaatgtattatcgaagaaattggtgata 1981563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 318 - 524
Target Start/End: Original strand, 45117226 - 45117433
Alignment:
Q  318 gtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggcccttttagtgagatttgct 417  Q
    |||||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  45117226 gtatatatagaaaaattatctgcaaaggcccaaactttgacatgataaaggaatgggctgacatttgttagtatttttggctcttttagtgagatttgct 45117325  T
Q  418 atatatatctcatgtaacacaaaattttctatatataccctcctataaaaa-atttggttgttcttgataatatgctcaaaattttattatcgaagaaat 516  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  45117326 atatatatcccatgtaacacaaaaatttctatatacaccctcctataaaaatatttggttgttcttgataatatgctcaaaaatttattatcgaagaaat 45117425  T
Q  517 tggtgata 524  Q
    ||||||||    
T  45117426 tggtgata 45117433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 291 - 524
Target Start/End: Original strand, 16729465 - 16729697
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    ||||||||||||||||||||| | | ||||| ||||| |||  | |||  ||||||||||||||||||| |||| ||||||||||||| |||||||| |     
T  16729465 tatatagaaatatttggatttggagcggtatgtatagcaaaactatctg-aaaggcccaaactttgacatgatataggaatgggctgaaatctgttaatg 16729563  T
Q  391 ttttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataatat 490  Q
    |||| ||||||||||| ||||||||||||||||||| |||| | ||||||| |||||||||| |||||||||||||||| ||||||||| || |||||||    
T  16729564 tttttggcccttttagagagatttgctatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaattggttgtttttaataatat 16729663  T
Q  491 gctcaaaattttattatcgaagaaattggtgata 524  Q
    |||| ||| |||||||||||||||||||||||||    
T  16729664 gctcgaaaatttattatcgaagaaattggtgata 16729697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 199 - 517
Target Start/End: Complemental strand, 7973442 - 7973125
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||| ||| ||         |||||         ||||||||    
T  7973442 cagggccggccctagggcataggccacgagtgcgacggcctagggcccatgccggtaggggg-cccaaaagtttttttaaggtg-tagggggtatataga 7973345  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||| ||||||||||||||| ||| ||||||  |||||| |||||||||||| ||| ||||||||| |||| |||||||  | |||| |||    
T  7973344 aatatttggattttggggggtatatatagcaaaattctctgaaaaggctcaaactttgacatgattaaggaatggactgaaatctgttgatgtttttggc 7973245  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatgctcaaa 497  Q
    |||||||||||||||| ||||||||||  |||||  ||||||  |||||||||| ||||||||||||     ||||||||||||| ||||||||||||||    
T  7973244 ccttttagtgagatttactatatatattccatgtggcacaaatatttctatatacaccctcctataattttttttggttgttcttaataatatgctcaaa 7973145  T
Q  498 attttattatcgaagaaatt 517  Q
    | ||||||||||||||||||    
T  7973144 aatttattatcgaagaaatt 7973125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 293 - 524
Target Start/End: Complemental strand, 7264001 - 7263769
Alignment:
Q  293 tatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtatt 392  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||  ||||| |||| |||||||| | || || ||||| |||| |||| ||| | ||    
T  7264001 tatagaaatatttggattttagggggtatatatagtaaacttctctaaaaaggtccaatctttgacatgttatagaaatggactgaaatctattaatgtt 7263902  T
Q  393 ttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatg 491  Q
    ||  ||||| |||||||||||||||||||||||| |||| | ||||||| |||||||||| |||||||||||| |||| |||||||||||| ||||||||    
T  7263901 ttttgccctattagtgagatttgctatatatatcccatgcagcacaaaaatttctatatacaccctcctataaaaaaaattggttgttcttaataatatg 7263802  T
Q  492 ctcaaaattttattatcgaagaaattggtgata 524  Q
     |  ||| |||||||||||||||||| ||||||    
T  7263801 tttgaaaatttattatcgaagaaattagtgata 7263769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 295 - 524
Target Start/End: Original strand, 39905965 - 39906193
Alignment:
Q  295 tagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtatttt 394  Q
    ||||||||||||||||| ||||||||||||||| ||  ||||||  |||||| |||||||||||| |||| || ||||| |||| |||||||  | ||||    
T  39905965 tagaaatatttggattttggggggtatatatagcaacattctctgaaaaggctcaaactttgacatgatatagaaatggactgaaatctgttgatgtttt 39906064  T
Q  395 cggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgct 493  Q
     ||||| |||||||||||||||||||||||||||||| | ||||||| ||||||||||  ||||| ||| ||||||||||||||||||| |||||||| |    
T  39906065 tggccc-tttagtgagatttgctatatatatctcatgcagcacaaaa-tttctatataccccctcatataaaaaaatttggttgttcttaataatatggt 39906162  T
Q  494 caaaattttattatcgaagaaattggtgata 524  Q
    | ||| | ||||||| |||||||||||||||    
T  39906163 cgaaaatatattatcaaagaaattggtgata 39906193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 291 - 524
Target Start/End: Complemental strand, 4432442 - 4432208
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||| |||||||||||||| ||||||||||||||| ||| |||  |  ||||||||||||||||| | |||| ||||||||||||| |||||||  |     
T  4432442 tatataaaaatatttggattttggggggtatatatagcaaagttcattgaaaaggcccaaactttgatatgatataggaatgggctgaaatctgtttatg 4432343  T
Q  391 ttttcg-gcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaa-tttggttgttcttgataat 488  Q
    ||||   ||||||||||||  |||||||||||||||| |||| | |||||||||| ||||||| |||||||||||||||| ||||||||||||| | |||    
T  4432342 tttttttgcccttttagtgcaatttgctatatatatcccatgcagcacaaaattt-ctatatacaccctcctataaaaaaatttggttgttcttaaaaat 4432244  T
Q  489 atgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||  || ||||||||||||||||||| |||||    
T  4432243 atgctcggaaatttattatcgaagaaattgatgata 4432208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 291 - 524
Target Start/End: Original strand, 40971178 - 40971409
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||||| ||||||||||||  |||||||||||||| ||| ||||||  |||||||||| |||||||| | || || |||||| ||| |||| ||| |     
T  40971178 tatatagatatatttggattttagggggtatatatagtaaaattctctgaaaaggcccaatctttgacatgttatagaaatgggttgaaatctattaatg 40971277  T
Q  391 ttttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataatat 490  Q
    ||||  ||||||||||||||||| | |||||||||  |||| | ||||||| || ||||||| |||||| ||||||||| |||| ||||||| |||||||    
T  40971278 tttt-tgcccttttagtgagattcgttatatatattccatgcagcacaaaaattcctatatacaccctcttataaaaaa-ttggctgttcttaataatat 40971375  T
Q  491 gctcaaaattttattatcgaagaaattggtgata 524  Q
    |||  ||| |||||||| ||||||||| ||||||    
T  40971376 gcttgaaaatttattattgaagaaattagtgata 40971409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 417 - 524
Target Start/End: Original strand, 18327212 - 18327320
Alignment:
Q  417 tatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaat-ttggttgttcttgataatatgctcaaaattttattatcgaagaaa 515  Q
    |||||||||| |||||| || |||  |||||||||| ||||||||||||||||  || ||||||||| ||||||||||||||| ||||||||||||||||    
T  18327212 tatatatatcccatgtagcagaaacatttctatatacaccctcctataaaaaaaattagttgttcttaataatatgctcaaaaatttattatcgaagaaa 18327311  T
Q  516 ttggtgata 524  Q
    ||| |||||    
T  18327312 ttgatgata 18327320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 45117137 - 45117201
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtcc 263  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  45117137 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggggtcc 45117201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 425
Target Start/End: Original strand, 18327047 - 18327180
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||||||||| |||||||| |||| || ||||||| ||| ||||||   |||| ||||||||||||| ||| ||||||||||| || |||||||| |     
T  18327047 tatatagaaatagttggattttggggtgtctatatagcaaaattctctgacaaggaccaaactttgacatgattaaggaatgggc-gaaatctgttaatg 18327145  T
Q  391 ttttcggcccttttagtgagatttgctatatatat 425  Q
    |||| | ||||||||||||||||| ||||||||||    
T  18327146 tttttgccccttttagtgagatttactatatatat 18327180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 40971089 - 40971153
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtcc 263  Q
    |||||||||||||||||||||||||||||||| || ||||||||| || ||| ||||||||||||    
T  40971089 cagggccggccctagggcataggccgcgagtgcgatggcctagggcccttgctggtagggggtcc 40971153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 6927983 - 6927923
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  6927983 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 6927923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 16729377 - 16729438
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggg 259  Q
    |||||||||||||||||||||||| | |||||| |||||||||||| || ||||||||||||    
T  16729377 acagggccggccctagggcataggtcacgagtgcgacggcctagggcccttgccggtagggg 16729438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 4432533 - 4432470
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||| |||||    
T  4432533 aacagggccggcccaagggcataggccgcaattgcgacggcctagggtccttgccggtgggggg 4432470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 261
Target Start/End: Complemental strand, 7264092 - 7264029
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggt 261  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||| || ||| ||||||||||    
T  7264092 acagggccggccctagggcataggccacgagtgcgacggtctagggcccttgctggtagggggt 7264029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 11995159 - 11995099
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||||| |||||| || ||||||||| ||||||||||||||||    
T  11995159 cagggccggccctagg-cataggccacgagtgcgatggcctagggcccatgccggtaggggg 11995099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 524
Target Start/End: Complemental strand, 11648949 - 11648889
Alignment:
Q  464 aaaaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
    |||||| |||||||||||| ||||| |||| ||||||||||||||||  ||||||||||||    
T  11648949 aaaaaaattggttgttcttaataatgtgctaaaaattttattatcgataaaattggtgata 11648889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 3509847 - 3509907
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||  ||||| | ||||||||    
T  3509847 cagggtcggccctagg-cataggccgcgagtgcgacggcctaggacccatgtctgtaggggg 3509907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 9137186 - 9137249
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtcc 263  Q
    |||| ||||||||||| ||||||||| | ||| |||| | |||||||||||||| ||||||||||    
T  9137186 caggaccggccctagg-cataggccgggggtgcgacgacttagggtccatgccgttagggggtcc 9137249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 39905874 - 39905934
Alignment:
Q  200 agggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||| ||||||| ||||||||||||||||  ||||||||| || || | |||||||||||    
T  39905874 agggctggccctacggcataggccgcgagttcgacggcctacggcccttaccggtaggggg 39905934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 199 - 524
Target Start/End: Original strand, 50565 - 50895
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnn-----aaggtaannnnnnntat 293  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||  ||||||||||||||| ||| ||              |||||||       |||    
T  50565 cagggccggccctagggcataggccgcaagtgcgacggcctagggcacatgccggtaggggg-cccaaactttttttttttttaaggtaagggggtgtat 50663  T
Q  294 atagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattt 393  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  50664 atagaaatatttggatttcggggggtatatataaaaaaattctcatcaaaggcccaaactttgacatgataaaggaatgggctgacatctgttagtatta 50763  T
Q  394 tcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgc 492  Q
    | ||| |||||||||||||||| |||||||||| | ||||||||||||||||||||||| |||||||| | ||||||||||| | |||||||||||||||    
T  50764 ttggctcttttagtgagatttgttatatatatcccctgtaacacaaaattttctatatacaccctcctttaaaaaaatttggcttttcttgataatatgc 50863  T
Q  493 tcaaaattttattatcgaagaaattggtgata 524  Q
    |||||| |||||||| ||||||||||||||||    
T  50864 tcaaaaatttattattgaagaaattggtgata 50895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 8e-87; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 199 - 524
Target Start/End: Complemental strand, 10095485 - 10095159
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||   |||||         |||||||       ||||||||    
T  10095485 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggga--cccaaattttttttaaggtaagagggtgtatataga 10095388  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    |||||||||||||| |||  ||||||||||||  |||||| |||||| ||||||||||||| |||||| ||||||||||||||||||||||||||| |||    
T  10095387 aatatttggatttctgggaatatatatagaaacattctctgcaaaggtccaaactttgacatgataaatgaatgggctgacatctgttagtatttttggc 10095288  T
Q  399 ccttttagtgagatttgctatat--atatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgctca 495  Q
    | |||||||||||||||||||||  ||||| |||||||||||||  |||||||||  |||||||||| |||||||||||||||||||||| |||||||||    
T  10095287 ctttttagtgagatttgctatatatatatcccatgtaacacaaatatttctatatgcaccctcctataaaaaaatttggttgttcttgattatatgctca 10095188  T
Q  496 aaattttattatcgaagaaattggtgata 524  Q
    ||| | |||||||||||||||||||||||    
T  10095187 aaaatgtattatcgaagaaattggtgata 10095159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 295 - 521
Target Start/End: Complemental strand, 7414109 - 7413883
Alignment:
Q  295 tagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtatttt 394  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  7414109 tagaaatatttggatttcggggggtatata-agaaacattctcttcaaaggcctaaactttgacatgataaagaaatgggctgacatctgttagtatttt 7414011  T
Q  395 cggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgct 493  Q
     ||||||||||||||||||||||||||||||| ||| |||||||||  |||||||||| |||||| ||| ||||||||||||||||||| ||||||||||    
T  7414010 tggcccttttagtgagatttgctatatatatcccatataacacaaatatttctatatacaccctcttataaaaaaatttggttgttcttcataatatgct 7413911  T
Q  494 caaaattttattatcgaagaaattggtg 521  Q
     |||| |||| |||||||||||||||||    
T  7413910 aaaaaatttactatcgaagaaattggtg 7413883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 295 - 521
Target Start/End: Complemental strand, 7460190 - 7459964
Alignment:
Q  295 tagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtatttt 394  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  7460190 tagaaatatttggatttcggggggtatata-agaaacattctcttcaaaggcctaaactttgacatgataaagaaatgggctgacatctgttagtatttt 7460092  T
Q  395 cggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataatatgct 493  Q
     ||||||||||||||||||||||||||||||| ||| |||||||||  |||||||||| |||||| ||| ||||||||||||||||||| ||||||||||    
T  7460091 tggcccttttagtgagatttgctatatatatcccatataacacaaatatttctatatacaccctcttataaaaaaatttggttgttcttcataatatgct 7459992  T
Q  494 caaaattttattatcgaagaaattggtg 521  Q
     |||| |||| |||||||||||||||||    
T  7459991 aaaaaatttactatcgaagaaattggtg 7459964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 197 - 516
Target Start/End: Complemental strand, 39480716 - 39480396
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaag-gtaannnnnnntatat 295  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||  ||         ||| |||        |||||    
T  39480716 aacagggccggccctagggcataggccgcgagtgcgacggcctagggcccatgccggtagggggcccaaaagtttttttaaagtgta---gggggtatat 39480620  T
Q  296 agaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttc 395  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||  ||||||||||||||||||| |||||||||||||||||| |||||||| | ||||     
T  39480619 agaaatatttggattttggggggtatatatagcaaaattctctgaaaaggcccaaactttgacatgataaaggaatgggctgaaatctgttaatgttttt 39480520  T
Q  396 ggcccttttagtgagatttgc--tatatatatctcatgtaacacaaaattttctatatataccctcctataa-aaaatttggttgttcttgataatatgc 492  Q
     |||||||||||||||||| |  |||||||||| |||||  ||||||  |||||||||| ||||||||| ||     ||||||||||||| |||||||||    
T  39480519 tgcccttttagtgagatttactatatatatatcccatgtggcacaaatatttctatatacaccctcctacaattttttttggttgttcttaataatatgc 39480420  T
Q  493 tcaaaattttattatcgaagaaat 516  Q
    |||||| ||||||||| |||||||    
T  39480419 tcaaaaatttattatcaaagaaat 39480396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 291 - 517
Target Start/End: Original strand, 36213469 - 36213693
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    ||||||||||||||||||||| || || ||||||||| ||| || |||  ||||||||||||||||||| |||||||||||||||||| |||||||| |     
T  36213469 tatatagaaatatttggattttggagg-tatatatagtaaaattatctgaaaaggcccaaactttgacatgataaaggaatgggctgaaatctgttaatg 36213567  T
Q  391 ttttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataatat 490  Q
    |||| |||||||||||||||||||  |||||||||| |||||   |||||  |||||||||| |||||||||| ||   |||  |||||||| |||||||    
T  36213568 tttttggcccttttagtgagatttattatatatatcccatgtggtacaaatatttctatatacaccctcctat-aattttttttttgttcttaataatat 36213666  T
Q  491 gctcaaaattttattatcgaagaaatt 517  Q
    |||||||||||||||||||||||||||    
T  36213667 gctcaaaattttattatcgaagaaatt 36213693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 199 - 507
Target Start/End: Complemental strand, 6262079 - 6261771
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||| ||| ||         |||||         ||||||||    
T  6262079 cagggccggccctagggcataggccgcgagtgcgacggcctaagg-ccatgccggtaggggg-cccaaaagtttttttaaggtg-tagggtgtatataga 6261983  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaa-ggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcgg 397  Q
    |||||| |||||| || ||||||||||||  || ||||||  ||| |||||||||||||||| |||||||||||||||||| |||||||| | |||| ||    
T  6261982 aatattaggattttggagggtatatatagtcaaattctctgaaaaaggcccaaactttgacatgataaaggaatgggctgaaatctgttaatgtttttgg 6261883  T
Q  398 cccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataa--aaaatttggttgttcttgataatatgctca 495  Q
    ||||||||||||||||| ||||||||||| |||||  ||||||  |||||||||| ||||||||||||      ||| ||||||||| ||||||||||||    
T  6261882 cccttttagtgagatttactatatatatcccatgtggcacaaatatttctatatacaccctcctataattttttttttgttgttcttaataatatgctca 6261783  T
Q  496 aaattttattat 507  Q
    ||| ||||||||    
T  6261782 aaaatttattat 6261771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 291 - 524
Target Start/End: Original strand, 52458748 - 52458983
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaag--gcccaaactttgacaagataaaggaatgggctgacatctgttag 388  Q
    ||||||||||||||| | ||| ||| | ||||||||| ||| ||||||  |||   || ||||  |||||| ||| ||||  |||||||| ||||||||     
T  52458748 tatatagaaatattttgtttttgggagctatatatagcaaaattctctaaaaaaaagctcaaatattgacatgatgaagggctgggctgaaatctgttaa 52458847  T
Q  389 tattttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataat 488  Q
    | ||||  |||||||| | |  |||||||||||||||| |||||| ||||||  |||||||||| |||||||||||| ||| |||||||||||| |||||    
T  52458848 tgttttttgcccttttggcgcaatttgctatatatatcccatgtatcacaaacatttctatatacaccctcctataataaaattggttgttcttaataat 52458947  T
Q  489 atgctcaaaattttattatcgaagaaattggtgata 524  Q
     ||||||||| ||||| |||||||||||| ||||||    
T  52458948 gtgctcaaaaatttatcatcgaagaaatttgtgata 52458983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 291 - 524
Target Start/End: Original strand, 52460005 - 52460240
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaag--gcccaaactttgacaagataaaggaatgggctgacatctgttag 388  Q
    ||||||||||||||||  ||| ||| | ||||||||| ||| ||||||  |||   || ||||  |||||| ||| ||||  |||||||| ||||||||     
T  52460005 tatatagaaatatttgatttttgggagctatatatagcaaaattctctaaaaaaaagctcaaatattgacatgatgaagggctgggctgaaatctgttaa 52460104  T
Q  389 tattttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaatttggttgttcttgataat 488  Q
    | ||||  |||||||| | |  |||||||||||||||| |||||| ||||||  |||||||||| |||||||||||| ||| |||||||||||| |||||    
T  52460105 tgttttttgcccttttggcgcaatttgctatatatatcccatgtatcacaaacatttctatatacaccctcctataataaaattggttgttcttaataat 52460204  T
Q  489 atgctcaaaattttattatcgaagaaattggtgata 524  Q
     ||||||||| ||||| |||||||||||| ||||||    
T  52460205 gtgctcaaaaatttatcatcgaagaaatttgtgata 52460240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 14192764 - 14192704
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  14192764 cagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgccggtaggggg 14192704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 524
Target Start/End: Complemental strand, 3665686 - 3665598
Alignment:
Q  436 acaaaattttctatatataccctcctataaaaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
    |||||| |||||| |||||||||| |||||||||||||| |||| || ||||| ||||||||| ||||||||| || ||| ||||||||    
T  3665686 acaaaaatttctacatataccctcttataaaaaatttggctgttgttaataatgtgctcaaaaatttattatcaaataaaatggtgata 3665598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 38052594 - 38052655
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| ||||||| ||||||||    
T  38052594 acagggccggccctagg-cataggccgcgagtgcgacggcctaggggccatgcccgtaggggg 38052655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 51337306 - 51337367
Alignment:
Q  198 acagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  51337306 acagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 51337367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 488
Target Start/End: Complemental strand, 9922130 - 9922021
Alignment:
Q  381 tctgttagtattttcggcccttttagtgagatttgctatatata-tctcatgtaacacaaaattttctatatataccct-cctataaaaaatttggttgt 478  Q
    ||||||| | |||||||||||||||||||| |||||||||||||  ||| | |||||||||  |||||||||| ||| | ||||||||||| |||||| |    
T  9922130 tctgttaatgttttcggcccttttagtgagttttgctatatataccctcgtataacacaaagatttctatatacaccatccctataaaaaaattggtttt 9922031  T
Q  479 tcttgataat 488  Q
    |||| |||||    
T  9922030 tcttaataat 9922021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 28143896 - 28143836
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  28143896 cagggccggccctagg-cataggccacgagtgcgacggcctagggcccatgccggtaggggg 28143836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 7414188 - 7414124
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtcc 263  Q
    ||||||||| ||||||| ||||||| |||||| |||||||||| | |||||||||||||||||||    
T  7414188 cagggccggtcctaggggataggccacgagtgcgacggcctagagcccatgccggtagggggtcc 7414124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 7460269 - 7460205
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtcc 263  Q
    ||||||||| ||||||| ||||||| |||||| |||||||||| | |||||||||||||||||||    
T  7460269 cagggccggtcctaggggataggccacgagtgcgacggcctagagcccatgccggtagggggtcc 7460205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 14033777 - 14033715
Alignment:
Q  197 aacagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||| ||||||  ||||||||    
T  14033777 aacagggccggccctagg-cataggccgcgagtgcgacggcctagggcccatgctcgtaggggg 14033715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 36213396 - 36213437
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggccta 240  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  36213396 cagggccggccctagggcataggccgcgaatgcgacggccta 36213437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 49242563 - 49242623
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||| || |||| ||||||||    
T  49242563 cagggccggccctagg-cataggccgggagtgcgacggcctagggcccttgcccgtaggggg 49242623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 29283431 - 29283368
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtcc 263  Q
    |||||||||||||| | ||||||||| | ||| |||||||||||| || ||||||||||||||||    
T  29283431 cagggccggccctatg-cataggccgtgggtgcgacggcctagggcccttgccggtagggggtcc 29283368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 524
Target Start/End: Original strand, 51758336 - 51758419
Alignment:
Q  443 tttctatatataccctcc-tataaaaaat-ttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
    |||||||||| ||||||| |||||||||  || ||||||||| ||||| |||  |||| |||||||||||||||||| ||||||    
T  51758336 tttctatatacaccctccctataaaaaaaattagttgttcttaataatgtgccaaaaaatttattatcgaagaaatttgtgata 51758419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 524
Target Start/End: Original strand, 10142049 - 10142110
Alignment:
Q  463 taaaaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
    |||||| ||||||||||||| ||||| |||  ||||  |||||||||||||||||| |||||    
T  10142049 taaaaagtttggttgttcttaataatgtgccaaaaaaattattatcgaagaaattgatgata 10142110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 524
Target Start/End: Original strand, 13957158 - 13957218
Alignment:
Q  464 aaaaaatttggttgttcttgataatatgctcaaaattttattatcgaagaaattggtgata 524  Q
    |||||| |||||||||||| ||||| ||||  |||  ||||||||||||||||| ||||||    
T  13957158 aaaaaaattggttgttcttaataatgtgctagaaaaattattatcgaagaaattagtgata 13957218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 432 - 518
Target Start/End: Original strand, 22594151 - 22594239
Alignment:
Q  432 taacacaaaattttctatatataccctcct-ataaaaaat-ttggttgttcttgataatatgctcaaaattttattatcgaagaaattg 518  Q
    |||||||||  |||||||||| ||| |||| ||||||||  |||||| ||||| ||||| |||  |||| |||||||||||||||||||    
T  22594151 taacacaaagatttctatatacaccttccttataaaaaaaattggtttttcttaataatgtgcctaaaaatttattatcgaagaaattg 22594239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 56367331 - 56367272
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggg 259  Q
    |||||||||||||||| |||||||||   ||| |||||||||||| ||||||| |||||||    
T  56367331 cagggccggccctagg-cataggccggaggtgcgacggcctagggcccatgcccgtagggg 56367272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 199 - 466
Target Start/End: Complemental strand, 12550 - 12287
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtagggggtccccaannnnnnnnnaaggtaannnnnnntatataga 298  Q
    |||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| ||| ||         |||||||       ||||||||    
T  12550 cagggccggccctagggcataggccgcgagtgcgacgtcctagggcccatgccggtaggggg-cccaaaattttttttaaggtaagggggtgtatataga 12452  T
Q  299 aatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagtattttcggc 398  Q
    ||||||||||||   | |||||||||||||||| |||||||||||| |||||| || |||| |||||||||||||| |||||||||||| || ||| |||    
T  12451 aatatttggattc--gtgggtatatatagaaaaattctcttcaaag-cccaaaattcgacatgataaaggaatgggttgacatctgttaatacttttggc 12355  T
Q  399 ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaa 466  Q
    | ||||||||| |||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||    
T  12354 ctttttagtgatatttgctatatatatcccatgtaacacaaaattttctacatacaccctcctataaa 12287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 98; Significance: 5e-48; HSPs: 9)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 291 - 524
Target Start/End: Complemental strand, 88479 - 88244
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||| |||||||||||||| ||||||||||||||| ||| ||| ||  ||||||||||||||||| | |||| || |||||||||| |||||||| |     
T  88479 tatataaaaatatttggattttggggggtatatatagcaaaattcactgaaaaggcccaaactttgatatgatatagaaatgggctgaaatctgttaatg 88380  T
Q  391 ttttcg-gcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaat--ttggttgttcttgataa 487  Q
    ||||   | |||||||||| ||||||||||||||||| |||| | |||||||||| ||||||| ||||||||||||||||   ||| |||||||| ||||    
T  88379 tttttttgaccttttagtgcgatttgctatatatatcacatgcagcacaaaattt-ctatatacaccctcctataaaaaaaaattgattgttcttaataa 88281  T
Q  488 tatgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||| ||| |||||||||||||||||| ||||||    
T  88280 tatgctcgaaaatttattatcgaagaaatttgtgata 88244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 291 - 524
Target Start/End: Complemental strand, 88955 - 88720
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||| |||||||||||||| ||||||||||||||| ||| ||| ||  ||||||||||||||||| | |||| || |||||||||| |||||||| |     
T  88955 tatataaaaatatttggattttggggggtatatatagcaaaattcactgaaaaggcccaaactttgatatgatatagaaatgggctgaaatctgttaatg 88856  T
Q  391 ttttcg-gcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaat--ttggttgttcttgataa 487  Q
    ||||   | |||||||||| ||||||||||||||||| |||| | |||||||||| ||||||| ||||||||||||||||   ||| |||||||| ||||    
T  88855 tttttttgaccttttagtgcgatttgctatatatatcacatgcagcacaaaattt-ctatatacaccctcctataaaaaaaaattgattgttcttaataa 88757  T
Q  488 tatgctcaaaattttattatcgaagaaattggtgata 524  Q
    ||||||| ||| |||||||||||||||||| ||||||    
T  88756 tatgctcgaaaatttattatcgaagaaatttgtgata 88720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 291 - 524
Target Start/End: Complemental strand, 88003 - 87769
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||| |||||||||||||| ||||||||||||||| ||| ||| ||  ||||||||||||||||| | |||| || |||||||||| |||||||| |     
T  88003 tatataaaaatatttggattttggggggtatatatagcaaaattcactgaaaaggcccaaactttgatatgatatagaaatgggctgaaatctgttaatg 87904  T
Q  391 ttttcggc-ccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaat-ttggttgttcttgataat 488  Q
    ||||     |||||||||| ||||||||||||||||| |||| | |||||||||| ||||||| ||||||||||||||||  |||||||||||| |||||    
T  87903 ttttttttaccttttagtgcgatttgctatatatatcacatgcagcacaaaattt-ctatatacaccctcctataaaaaaaattggttgttcttaataat 87805  T
Q  489 atgctcaaaattttattatcgaagaaattggtgata 524  Q
    |||| | ||| |||||||||||||||||| ||||||    
T  87804 atgcccgaaaatttattatcgaagaaatttgtgata 87769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 291 - 524
Target Start/End: Complemental strand, 89430 - 89196
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||| |||||||||||||| ||| ||||||||||| ||| ||| ||  ||||||||||||||||| | |||| || |||||||||| |||||||| |     
T  89430 tatataaaaatatttggattttgggaggtatatatagcaaaattcactgaaaaggcccaaactttgatatgatatagaaatgggctgaaatctgttaatg 89331  T
Q  391 ttttcg-gcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctataaaaaat-ttggttgttcttgataat 488  Q
    ||||   | |||||||||| ||||||||||||||||| |||| | |||||||||| ||||||| ||||||||||||||||  ||| |||||||| |||||    
T  89330 tttttttgaccttttagtgcgatttgctatatatatcacatgcagcacaaaattt-ctatatacaccctcctataaaaaaaattgattgttcttaataat 89232  T
Q  489 atgctcaaaattttattatcgaagaaattggtgata 524  Q
    |||||| ||| |||||||||||||||||| ||||||    
T  89231 atgctcgaaaatttattatcgaagaaatttgtgata 89196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 291 - 494
Target Start/End: Complemental strand, 87530 - 87326
Alignment:
Q  291 tatatagaaatatttggatttcggggggtatatatagaaaacttctcttcaaaggcccaaactttgacaagataaaggaatgggctgacatctgttagta 390  Q
    |||||| |||||||||||||| ||||| ||||||||| ||| |||  |  ||||||||||||||||| | |||| || ||| |||||| |||||||| ||    
T  87530 tatataaaaatatttggattttgggggatatatatagcaaaattcattgaaaaggcccaaactttgatatgatatagaaattggctgaaatctgttaata 87431  T
Q  391 -ttttcggcccttttagtgagatttgctatatatatctcatgtaacacaaaattttctatatataccctcctat-aaaaaatttggttgttcttgataat 488  Q
     ||||  | |||||||||| ||||||||||||||||| |||| | ||||||| |||||||||| |||||||||| ||||||||||||| || || |||||    
T  87430 tttttttgaccttttagtgcgatttgctatatatatcccatgcagcacaaaa-tttctatatacaccctcctataaaaaaatttggttatttttaataat 87332  T
Q  489 atgctc 494  Q
    ||||||    
T  87331 atgctc 87326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 88091 - 88030
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||| || | |||||||||||    
T  88091 cagggccggcactaaggcataggccgcgagtgcgacggcctagggccctttccggtaggggg 88030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 89517 - 89456
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||| |||||||||| |||||| |||||||||||| || || ||||||||||    
T  89517 cagggccggccctaaggcataggccccgagtgcgacggcctagggcccttgtcggtaggggg 89456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 88567 - 88506
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||| ||| || |||||||||||||| |||||||||||| || | |||||||||||    
T  88567 cagggccggcactaaggtataggccgcgagtgcgacggcctagggccctttccggtaggggg 88506  T

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Target: scaffold0016; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 89043 - 88982
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||| ||| || |||||||||||||| |||||||||||| || | |||||||||||    
T  89043 cagggccggcactaaggtataggccgcgagtgcgacggcctagggccctttccggtaggggg 88982  T

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Target: scaffold0601 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 6428 - 6489
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||    
T  6428 cagggccggccctagggcataggccgcgagtgcgacggcctagggcccttgccggtaggggg 6489  T

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Target: scaffold0743 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 3741 - 3684
Alignment:
Q  200 agggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggg 258  Q
    ||||||||||||||| ||||||||  ||||| |||||||||||| ||||||| ||||||    
T  3741 agggccggccctagg-cataggccatgagtgcgacggcctagggcccatgccagtaggg 3684  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 40460 - 40520
Alignment:
Q  199 cagggccggccctagggcataggccgcgagtgtgacggcctagggtccatgccggtaggggg 260  Q
    |||||||||||||||| ||||||||| | ||| |||||||||||| |||||||  |||||||    
T  40460 cagggccggccctagg-cataggccgggggtgcgacggcctagggcccatgccattaggggg 40520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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