View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18355_low_11 (Length: 373)

Name: NF18355_low_11
Description: NF18355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18355_low_11
NF18355_low_11
[»] chr7 (44 HSPs)
chr7 (8-212)||(16376572-16376776)
chr7 (8-212)||(40968889-40969093)
chr7 (8-212)||(13786168-13786372)
chr7 (8-210)||(21669979-21670181)
chr7 (8-207)||(21753524-21753723)
chr7 (8-243)||(27903413-27903648)
chr7 (8-212)||(21656626-21656830)
chr7 (8-212)||(24924077-24924281)
chr7 (8-211)||(43933572-43933775)
chr7 (8-207)||(15109697-15109896)
chr7 (8-242)||(21804569-21804803)
chr7 (8-241)||(42242152-42242385)
chr7 (8-212)||(31373454-31373658)
chr7 (8-244)||(33916942-33917178)
chr7 (8-212)||(38163366-38163570)
chr7 (13-209)||(3840671-3840867)
chr7 (45-212)||(39030279-39030446)
chr7 (8-210)||(27138557-27138759)
chr7 (8-211)||(17178265-17178469)
chr7 (8-212)||(21341821-21342025)
chr7 (8-54)||(31096698-31096744)
chr7 (13-54)||(3840914-3840955)
chr7 (13-54)||(16376814-16376855)
chr7 (13-54)||(17178510-17178551)
chr7 (13-54)||(21341737-21341778)
chr7 (13-54)||(21656547-21656588)
chr7 (13-54)||(21669895-21669936)
chr7 (13-54)||(21804844-21804885)
chr7 (13-54)||(27138800-27138841)
chr7 (13-54)||(31373370-31373411)
chr7 (13-54)||(33917219-33917260)
chr7 (13-54)||(42242426-42242467)
chr7 (13-54)||(43933815-43933856)
chr7 (178-212)||(21681077-21681111)
chr7 (16-54)||(24924001-24924039)
chr7 (239-281)||(28424974-28425016)
chr7 (239-281)||(38481985-38482027)
chr7 (239-281)||(44745335-44745377)
chr7 (239-281)||(48621043-48621085)
chr7 (239-288)||(9486429-9486478)
chr7 (13-54)||(15109932-15109973)
chr7 (13-54)||(21753762-21753803)
chr7 (13-54)||(27903688-27903729)
chr7 (13-54)||(31096615-31096656)
[»] chr5 (45 HSPs)
chr5 (8-212)||(20655076-20655280)
chr5 (8-212)||(33375760-33375966)
chr5 (8-212)||(25099263-25099467)
chr5 (8-212)||(25158353-25158557)
chr5 (8-203)||(29275622-29275817)
chr5 (8-241)||(5479194-5479427)
chr5 (8-197)||(27647928-27648117)
chr5 (8-212)||(1395987-1396191)
chr5 (8-241)||(34107336-34107569)
chr5 (8-212)||(20874686-20874890)
chr5 (8-212)||(24223191-24223395)
chr5 (8-212)||(34110650-34110854)
chr5 (8-212)||(38246892-38247096)
chr5 (8-212)||(16526333-16526537)
chr5 (8-241)||(2398940-2399171)
chr5 (8-197)||(6940545-6940734)
chr5 (8-241)||(10729440-10729673)
chr5 (8-203)||(17373200-17373395)
chr5 (8-204)||(33570342-33570538)
chr5 (8-184)||(1394541-1394717)
chr5 (13-176)||(17913744-17913907)
chr5 (8-190)||(14141156-14141338)
chr5 (89-212)||(40177120-40177243)
chr5 (239-281)||(6892887-6892929)
chr5 (13-54)||(1395907-1395948)
chr5 (13-54)||(2399212-2399253)
chr5 (13-54)||(5479115-5479156)
chr5 (13-54)||(6940770-6940811)
chr5 (13-54)||(10729714-10729755)
chr5 (13-54)||(14141379-14141420)
chr5 (13-54)||(16526579-16526620)
chr5 (13-54)||(17373436-17373477)
chr5 (13-54)||(20874604-20874645)
chr5 (13-54)||(24223436-24223477)
chr5 (13-54)||(27647845-27647886)
chr5 (13-54)||(33570580-33570621)
chr5 (13-54)||(34107610-34107651)
chr5 (13-54)||(34110566-34110607)
chr5 (13-54)||(38247137-38247178)
chr5 (13-54)||(40177033-40177074)
chr5 (13-54)||(1394752-1394793)
chr5 (13-54)||(25158596-25158637)
chr5 (13-54)||(33375680-33375721)
chr5 (239-283)||(4876363-4876407)
chr5 (13-53)||(29275540-29275580)
[»] chr4 (47 HSPs)
chr4 (8-212)||(37590831-37591035)
chr4 (8-212)||(44376106-44376310)
chr4 (8-212)||(41387124-41387328)
chr4 (8-212)||(46256032-46256236)
chr4 (14-241)||(16904950-16905177)
chr4 (8-212)||(45977017-45977221)
chr4 (8-212)||(33139498-33139702)
chr4 (8-241)||(16917886-16918119)
chr4 (8-242)||(52434622-52434856)
chr4 (8-212)||(30824949-30825153)
chr4 (8-212)||(31628514-31628718)
chr4 (8-212)||(53143289-53143493)
chr4 (8-212)||(52098217-52098422)
chr4 (14-209)||(35760585-35760780)
chr4 (8-212)||(37651664-37651868)
chr4 (8-212)||(39058384-39058588)
chr4 (8-209)||(48118564-48118762)
chr4 (8-190)||(45782478-45782660)
chr4 (8-212)||(12090486-12090691)
chr4 (8-212)||(31965996-31966200)
chr4 (8-210)||(47142829-47143031)
chr4 (8-212)||(54624955-54625152)
chr4 (13-177)||(50229768-50229933)
chr4 (151-197)||(50229714-50229760)
chr4 (13-54)||(12090732-12090773)
chr4 (13-54)||(16905220-16905261)
chr4 (13-54)||(16918160-16918201)
chr4 (13-54)||(30825194-30825235)
chr4 (13-54)||(31966241-31966282)
chr4 (13-54)||(39058624-39058665)
chr4 (13-54)||(45977266-45977307)
chr4 (13-54)||(47143072-47143113)
chr4 (13-54)||(48118804-48118845)
chr4 (13-54)||(52098462-52098503)
chr4 (13-54)||(52434540-52434581)
chr4 (13-54)||(53143536-53143577)
chr4 (13-54)||(54624879-54624920)
chr4 (13-53)||(50229979-50230019)
chr4 (239-282)||(23164133-23164176)
chr4 (239-301)||(6183776-6183838)
chr4 (239-281)||(29627694-29627736)
chr4 (239-281)||(33510007-33510049)
chr4 (239-281)||(35842234-35842276)
chr4 (239-301)||(40120527-40120589)
chr4 (239-301)||(48056198-48056259)
chr4 (13-54)||(41387042-41387083)
chr4 (13-54)||(44376349-44376390)
[»] chr3 (55 HSPs)
chr3 (8-212)||(4584461-4584665)
chr3 (8-237)||(39146438-39146667)
chr3 (8-212)||(36076481-36076685)
chr3 (8-209)||(20671247-20671448)
chr3 (8-212)||(26948796-26949000)
chr3 (8-241)||(45557882-45558115)
chr3 (8-212)||(31488409-31488613)
chr3 (8-242)||(38653924-38654158)
chr3 (8-212)||(3898420-3898624)
chr3 (8-212)||(12264198-12264402)
chr3 (8-212)||(43363638-43363842)
chr3 (8-212)||(49672560-49672764)
chr3 (8-212)||(1941747-1941951)
chr3 (8-212)||(21098302-21098506)
chr3 (8-200)||(24119205-24119397)
chr3 (8-212)||(34121353-34121557)
chr3 (8-212)||(49506376-49506580)
chr3 (8-203)||(54073025-54073220)
chr3 (8-212)||(55041610-55041820)
chr3 (8-209)||(49478206-49478407)
chr3 (56-212)||(40014680-40014836)
chr3 (73-207)||(26051334-26051469)
chr3 (8-81)||(26052236-26052309)
chr3 (133-241)||(6460166-6460273)
chr3 (239-288)||(2122576-2122625)
chr3 (66-134)||(37318531-37318599)
chr3 (13-56)||(36076721-36076764)
chr3 (239-281)||(35100871-35100913)
chr3 (239-301)||(41246939-41247001)
chr3 (13-54)||(1941992-1942033)
chr3 (13-54)||(3898338-3898379)
chr3 (13-54)||(12264115-12264156)
chr3 (13-54)||(20671166-20671207)
chr3 (13-54)||(21098219-21098260)
chr3 (13-54)||(26052351-26052392)
chr3 (13-54)||(26948689-26948730)
chr3 (13-54)||(31488329-31488370)
chr3 (239-288)||(32981978-32982027)
chr3 (13-54)||(34121271-34121312)
chr3 (13-54)||(38654200-38654241)
chr3 (13-54)||(43363883-43363924)
chr3 (13-54)||(49478124-49478165)
chr3 (13-54)||(49672478-49672519)
chr3 (13-54)||(55041860-55041901)
chr3 (239-281)||(30813689-30813731)
chr3 (239-293)||(42463497-42463551)
chr3 (239-281)||(42497712-42497754)
chr3 (239-281)||(45692789-45692831)
chr3 (239-281)||(47175070-47175112)
chr3 (239-293)||(51709702-51709756)
chr3 (239-281)||(51990248-51990290)
chr3 (239-281)||(52226013-52226055)
chr3 (13-54)||(24119126-24119167)
chr3 (13-54)||(39146363-39146404)
chr3 (13-54)||(45558155-45558196)
[»] chr8 (59 HSPs)
chr8 (8-212)||(39257441-39257645)
chr8 (8-240)||(11725188-11725420)
chr8 (8-212)||(40026798-40027002)
chr8 (8-212)||(18568863-18569067)
chr8 (8-187)||(24004779-24004958)
chr8 (14-212)||(28582859-28583057)
chr8 (8-242)||(44832183-44832417)
chr8 (8-212)||(24408874-24409078)
chr8 (8-208)||(28274245-28274445)
chr8 (18-212)||(35122349-35122543)
chr8 (8-212)||(15961130-15961334)
chr8 (8-212)||(18841902-18842106)
chr8 (8-212)||(18997698-18997902)
chr8 (8-212)||(30473911-30474115)
chr8 (8-191)||(19240661-19240844)
chr8 (8-191)||(19313845-19314028)
chr8 (8-241)||(18175379-18175612)
chr8 (8-241)||(32110859-32111092)
chr8 (8-212)||(6299047-6299251)
chr8 (8-212)||(10477935-10478139)
chr8 (13-207)||(18210656-18210850)
chr8 (8-197)||(19412829-19413019)
chr8 (8-212)||(995842-996046)
chr8 (8-212)||(44836907-44837111)
chr8 (8-208)||(11142459-11142665)
chr8 (45-212)||(39997726-39997893)
chr8 (8-207)||(25875322-25875530)
chr8 (8-128)||(23353688-23353808)
chr8 (8-70)||(18481929-18481991)
chr8 (239-293)||(10653362-10653416)
chr8 (8-54)||(39997660-39997706)
chr8 (239-281)||(36590874-36590916)
chr8 (239-293)||(40552509-40552563)
chr8 (13-54)||(6299292-6299333)
chr8 (13-54)||(10477853-10477894)
chr8 (13-54)||(11142381-11142422)
chr8 (13-54)||(11725106-11725147)
chr8 (13-54)||(18175297-18175338)
chr8 (13-54)||(18997616-18997657)
chr8 (13-54)||(19240580-19240621)
chr8 (13-54)||(19313764-19313805)
chr8 (13-54)||(19412752-19412793)
chr8 (13-54)||(23353848-23353889)
chr8 (13-54)||(24408795-24408836)
chr8 (13-54)||(30474155-30474196)
chr8 (13-54)||(32111133-32111174)
chr8 (13-54)||(35122587-35122628)
chr8 (13-54)||(39997580-39997621)
chr8 (13-54)||(44832459-44832500)
chr8 (13-54)||(44836824-44836865)
chr8 (14-54)||(18210895-18210935)
chr8 (239-293)||(15278603-15278657)
chr8 (239-293)||(15458972-15459026)
chr8 (239-281)||(24666230-24666272)
chr8 (13-54)||(996087-996128)
chr8 (13-54)||(18841829-18841870)
chr8 (13-54)||(25875569-25875610)
chr8 (13-54)||(28582777-28582818)
chr8 (17-54)||(39257362-39257399)
[»] chr1 (46 HSPs)
chr1 (8-241)||(9216029-9216262)
chr1 (8-197)||(39727978-39728167)
chr1 (8-211)||(38444629-38444832)
chr1 (8-212)||(7333942-7334146)
chr1 (8-212)||(18855260-18855463)
chr1 (8-212)||(35614065-35614269)
chr1 (8-212)||(4266379-4266583)
chr1 (8-212)||(34888713-34888917)
chr1 (8-212)||(38913774-38913978)
chr1 (8-212)||(50151058-50151262)
chr1 (8-209)||(23482737-23482938)
chr1 (8-209)||(18706539-18706739)
chr1 (13-212)||(52687141-52687339)
chr1 (27-212)||(1231813-1231998)
chr1 (8-212)||(2951393-2951597)
chr1 (13-193)||(35614819-35614998)
chr1 (18-196)||(19764593-19764771)
chr1 (8-144)||(2590333-2590468)
chr1 (8-145)||(19768462-19768599)
chr1 (86-212)||(31018227-31018353)
chr1 (86-212)||(50326077-50326203)
chr1 (122-206)||(5061335-5061419)
chr1 (151-212)||(29942159-29942220)
chr1 (239-293)||(46928359-46928413)
chr1 (239-293)||(15349547-15349601)
chr1 (239-293)||(36378454-36378508)
chr1 (239-293)||(49184560-49184614)
chr1 (13-54)||(1231725-1231766)
chr1 (13-54)||(2951638-2951679)
chr1 (13-54)||(4266297-4266338)
chr1 (13-54)||(18706775-18706816)
chr1 (13-54)||(19764816-19764857)
chr1 (13-54)||(19768382-19768423)
chr1 (13-54)||(23482974-23483015)
chr1 (13-54)||(35614734-35614775)
chr1 (13-54)||(38914019-38914060)
chr1 (13-54)||(52036312-52036353)
chr1 (13-53)||(7333863-7333903)
chr1 (239-281)||(28429711-28429753)
chr1 (239-293)||(30494577-30494631)
chr1 (239-301)||(37671582-37671643)
chr1 (13-51)||(52687386-52687424)
chr1 (13-54)||(35613984-35614025)
chr1 (13-50)||(38444549-38444586)
chr1 (239-275)||(6814751-6814787)
chr1 (239-279)||(37704506-37704546)
[»] chr6 (35 HSPs)
chr6 (8-212)||(2005426-2005630)
chr6 (13-210)||(15044725-15044922)
chr6 (8-211)||(10584756-10584959)
chr6 (14-212)||(13533771-13533969)
chr6 (8-209)||(17202430-17202631)
chr6 (8-212)||(3592891-3593095)
chr6 (8-212)||(12597292-12597496)
chr6 (8-212)||(19997663-19997867)
chr6 (8-212)||(33645940-33646144)
chr6 (8-212)||(28099624-28099828)
chr6 (8-212)||(2266766-2266978)
chr6 (8-171)||(17594814-17594978)
chr6 (8-136)||(8539598-8539726)
chr6 (8-137)||(25448747-25448876)
chr6 (100-203)||(33035523-33035626)
chr6 (118-212)||(1405590-1405684)
chr6 (239-281)||(1225977-1226019)
chr6 (13-54)||(2266684-2266725)
chr6 (13-54)||(10584998-10585039)
chr6 (13-54)||(12597537-12597578)
chr6 (13-54)||(15044639-15044680)
chr6 (13-54)||(17202348-17202389)
chr6 (13-54)||(17594733-17594774)
chr6 (13-54)||(19997580-19997621)
chr6 (13-54)||(28099870-28099911)
chr6 (13-54)||(33645858-33645899)
chr6 (239-279)||(29413449-29413489)
chr6 (239-281)||(3636346-3636388)
chr6 (239-281)||(29822431-29822473)
chr6 (13-54)||(2005348-2005389)
chr6 (13-54)||(3589064-3589105)
chr6 (13-50)||(3592087-3592124)
chr6 (13-54)||(3592812-3592853)
chr6 (13-54)||(25448665-25448706)
chr6 (180-212)||(8539723-8539755)
[»] scaffold0173 (1 HSPs)
scaffold0173 (8-240)||(19345-19577)
[»] chr2 (35 HSPs)
chr2 (8-208)||(999262-999462)
chr2 (8-209)||(36279484-36279685)
chr2 (8-212)||(8700259-8700463)
chr2 (8-209)||(31424007-31424208)
chr2 (8-212)||(19596390-19596594)
chr2 (8-206)||(26231292-26231490)
chr2 (8-212)||(41664508-41664712)
chr2 (8-211)||(41663235-41663438)
chr2 (8-241)||(18351549-18351782)
chr2 (8-212)||(42055197-42055399)
chr2 (8-212)||(6120550-6120754)
chr2 (13-212)||(34007736-34007935)
chr2 (8-212)||(44902080-44902283)
chr2 (13-212)||(20544828-20545027)
chr2 (8-239)||(42441958-42442193)
chr2 (8-197)||(16214822-16215011)
chr2 (73-212)||(692229-692368)
chr2 (86-241)||(27944794-27944949)
chr2 (13-54)||(19596636-19596677)
chr2 (239-301)||(17501853-17501915)
chr2 (13-54)||(6120467-6120508)
chr2 (13-54)||(16214741-16214782)
chr2 (13-54)||(18351467-18351508)
chr2 (13-54)||(26231529-26231570)
chr2 (13-54)||(31423924-31423965)
chr2 (13-54)||(34007982-34008023)
chr2 (13-54)||(41663152-41663193)
chr2 (13-54)||(42441876-42441917)
chr2 (239-281)||(2046582-2046624)
chr2 (239-293)||(8069988-8070042)
chr2 (13-54)||(999502-999543)
chr2 (239-280)||(7570440-7570481)
chr2 (13-50)||(36279729-36279766)
chr2 (13-54)||(41664426-41664467)
chr2 (13-50)||(44901998-44902035)
[»] scaffold0031 (1 HSPs)
scaffold0031 (8-212)||(46272-46476)
[»] scaffold0022 (2 HSPs)
scaffold0022 (8-212)||(149077-149281)
scaffold0022 (13-54)||(149320-149361)
[»] scaffold0515 (1 HSPs)
scaffold0515 (68-212)||(6088-6232)
[»] scaffold0306 (1 HSPs)
scaffold0306 (68-212)||(6098-6242)
[»] scaffold0836 (1 HSPs)
scaffold0836 (87-212)||(5305-5430)
[»] scaffold0011 (1 HSPs)
scaffold0011 (239-281)||(64582-64624)


Alignment Details
Target: chr7 (Bit Score: 173; Significance: 6e-93; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 16376776 - 16376572
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  16376776 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 16376677  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  16376676 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 16376577  T
Q  208 acccg 212  Q
    |||||    
T  16376576 acccg 16376572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 40968889 - 40969093
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  40968889 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 40968988  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||||    
T  40968989 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttgtgtctactacatctacaatgtatatg 40969088  T
Q  208 acccg 212  Q
    |||||    
T  40969089 acccg 40969093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 13786168 - 13786372
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||     
T  13786168 ccaataatataacattgacatataattttaacaaaaaaatgaagtaagacgcgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 13786267  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  13786268 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 13786367  T
Q  208 acccg 212  Q
    |||||    
T  13786368 acccg 13786372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 8 - 210
Target Start/End: Original strand, 21669979 - 21670181
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  21669979 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 21670078  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  21670079 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 21670178  T
Q  208 acc 210  Q
    |||    
T  21670179 acc 21670181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 21753723 - 21753524
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |     
T  21753723 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctaag 21753624  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  21753623 gttcgaattttaacatctgcatatatttgagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 21753524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 27903648 - 27903413
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||     
T  27903648 ccaataatataacattgacatagaattttaacaaaagaatgaagtaagacacgattggtaaaaattaatatttttaaggtgaataagtgtggtgtatgag 27903549  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  27903548 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatg 27903449  T
Q  208 acccgcacaggtacacaggtggaaagtctagttatg 243  Q
    |||||  | |   ||| |||||||||||||||||||    
T  27903448 acccgtgcggcagcacgggtggaaagtctagttatg 27903413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 21656626 - 21656830
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  21656626 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 21656725  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |||||||  ||||||||    
T  21656726 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctacttcatctacagtgtatatg 21656825  T
Q  208 acccg 212  Q
    |||||    
T  21656826 acccg 21656830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 24924077 - 24924281
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||     
T  24924077 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaatttaatatttttaaggtgaataagtgtggtgtctgag 24924176  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    ||||||||| |||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  24924177 gttcaaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 24924276  T
Q  208 acccg 212  Q
    |||||    
T  24924277 acccg 24924281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 43933775 - 43933572
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  43933775 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 43933676  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| |||| |||||||||||||||||||| |||||||||    
T  43933675 gttcgaattccaacatctgcatatatttgggaccacatattttattctcttttatatgcattgagatttttttttgtctactacatctacaatgtatatg 43933576  T
Q  208 accc 211  Q
    ||||    
T  43933575 accc 43933572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 15109896 - 15109697
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||  ||||||||||||||||||||     
T  15109896 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatacttttaagatgaataagtgtggtgtctgag 15109797  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  15109796 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 15109697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 21804803 - 21804569
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  21804803 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21804704  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  21804703 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 21804604  T
Q  208 acccgcacaggtacacaggtggaaagtctagttat 242  Q
    |||||  | |   ||| ||||||||||||||||||    
T  21804603 acccgtgcggcagcacgggtggaaagtctagttat 21804569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 42242385 - 42242152
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  42242385 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 42242286  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  42242285 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 42242186  T
Q  208 acccgcacaggtacacaggtggaaagtctagtta 241  Q
    |||||  | |   ||| |||||||||||||||||    
T  42242185 acccgtgcggcagcacgggtggaaagtctagtta 42242152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 31373454 - 31373658
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  31373454 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 31373553  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||| || |||||| |||||||||    
T  31373554 gttcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 31373653  T
Q  208 acccg 212  Q
    |||||    
T  31373654 acccg 31373658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 33917178 - 33916942
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  33917178 ccaataatataatattgacatataattttaacaaaagaatgaaataacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33917079  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  33917078 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 33916979  T
Q  208 acccgcacaggtacacaggtggaaagtctagttatga 244  Q
    |||||  | |   ||| ||||||||||||||||||||    
T  33916978 acccgtgcggcagcacgggtggaaagtctagttatga 33916942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 38163570 - 38163366
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  38163570 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38163471  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  38163470 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38163371  T
Q  208 acccg 212  Q
    |||||    
T  38163370 acccg 38163366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 13 - 209
Target Start/End: Complemental strand, 3840867 - 3840671
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttca 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| ||||||||||| ||||     
T  3840867 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 3840768  T
Q  113 aatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgac 209  Q
    |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  3840767 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgac 3840671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 39030446 - 39030279
Alignment:
Q  45 aatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttcaaatttcaacatctgcatatatttgggaccaca 144  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||    
T  39030446 aatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 39030347  T
Q  145 tgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || |||||||||||    
T  39030346 tgttttattctctttgatatgcattgaaatttgtttttgtctactacatctacaatatatatgacccg 39030279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 8 - 210
Target Start/End: Complemental strand, 27138759 - 27138557
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  27138759 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 27138660  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||  |||||||||    
T  27138659 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctagaatgtatatg 27138560  T
Q  208 acc 210  Q
    |||    
T  27138559 acc 27138557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 17178469 - 17178265
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaag-tgaataagtgtggtgtctga 106  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||   | ||||||||||||||||||||    
T  17178469 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacccgattgataaaaattaatattttttttggtgaataagtgtggtgtctga 17178370  T
Q  107 agttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatat 206  Q
     |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||| ||||| |||||||||||||||||| |||||| ||||||||    
T  17178369 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgaattgagatttgtttttgtctactatatctacaatgtatat 17178270  T
Q  207 gaccc 211  Q
    |||||    
T  17178269 gaccc 17178265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 21341821 - 21342025
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  21341821 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21341920  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||||||||||||| ||| |||| ||| ||||| ||||||||||||||| |||| |||||||||| || |||||| |||||||||    
T  21341921 gttcgaattccaacatctgcatatatttgagactacatatttcattctctttgatatgcattgagatttatttttgtctattatatctacaatgtatatg 21342020  T
Q  208 acccg 212  Q
    |||||    
T  21342021 acccg 21342025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 31096698 - 31096744
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  31096698 ccaataatataatattgacatataattttaacaaaagaatgaagtaa 31096744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 3840955 - 3840914
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  3840955 aatataacattaacatataatttttacaaaagaatgaagtaa 3840914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 16376855 - 16376814
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  16376855 aatataacattgacatataatttttacaaaataatgaagtaa 16376814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 17178551 - 17178510
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  17178551 aatataacattaacatataatttttacaaaagaatgaagtaa 17178510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 21341737 - 21341778
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  21341737 aatataacattaacatataatttttacaaaagaatgaagtaa 21341778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 21656547 - 21656588
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  21656547 aatataacattaacatataatttttacaaaagaatgaagtaa 21656588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 21669895 - 21669936
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  21669895 aatataacattaacatataatttttacaaaagaatgaagtaa 21669936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 21804885 - 21804844
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  21804885 aatataacattaacatataatttttacaaaagaatgaagtaa 21804844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 27138841 - 27138800
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  27138841 aatataacattaacatataatttttacaaaagaatgaagtaa 27138800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 31373370 - 31373411
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  31373370 aatataacattaacatataatttttacaaaagaatgaagtaa 31373411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 33917260 - 33917219
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  33917260 aatataacattaacatataatttttacaaaagaatgaagtaa 33917219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 42242467 - 42242426
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  42242467 aatataacattaacatataatttttacaaaagaatgaagtaa 42242426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 43933856 - 43933815
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  43933856 aatataacattaacatataatttttacaaaagaatgaagtaa 43933815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 21681077 - 21681111
Alignment:
Q  178 tttttgtctactacatctacgatgtatatgacccg 212  Q
    |||||||||||||||| ||||||||||||||||||    
T  21681077 tttttgtctactacatttacgatgtatatgacccg 21681111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 24924001 - 24924039
Alignment:
Q  16 ataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  24924001 ataacattaacatataatttttacaaaagaatgaagtaa 24924039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 28425016 - 28424974
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  28425016 ttatgaattaaaaatgtcattttatgtaattttacatctatca 28424974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 38481985 - 38482027
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  38481985 ttatgaattaaaaatgtcattttatgtaattttacatctatca 38482027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 44745335 - 44745377
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  44745335 ttatgaattaaaaatgtcattttatgtaattttacatctatca 44745377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 48621043 - 48621085
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  48621043 ttatgaattaaaaatgtccttttatgtaattttacatctatca 48621085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 9486429 - 9486478
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaatt 288  Q
    ||||||||||||||| || |||||| |||||||| |||||||| ||||||    
T  9486429 ttatgaattaaaaatgtccttttatgtaattttatatctatcagttaatt 9486478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 15109973 - 15109932
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  15109973 aatataatattaacatataatttttacaaaagaatgaagtaa 15109932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 21753803 - 21753762
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  21753803 aatataacattaacatataatttttacaaaataatgaagtaa 21753762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 27903729 - 27903688
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  27903729 aatataacattaacatataatttttacaaaataatgaagtaa 27903688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 31096615 - 31096656
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||| | |||||||||||||||||    
T  31096615 aatataacattaacatataattcttacaaaagaatgaagtaa 31096656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 169; Significance: 1e-90; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 20655280 - 20655076
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||     
T  20655280 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 20655181  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  20655180 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 20655081  T
Q  208 acccg 212  Q
    |||||    
T  20655080 acccg 20655076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 33375760 - 33375966
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  33375760 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 33375859  T
Q  108 gttcaaatttcaacatctgcatatatttggg--accacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtata 205  Q
    |||| |||| |||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  33375860 gttcgaattccaacatctgcatatatttgggacaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtata 33375959  T
Q  206 tgacccg 212  Q
    |||||||    
T  33375960 tgacccg 33375966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 25099467 - 25099263
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||     
T  25099467 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgag 25099368  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  25099367 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatg 25099268  T
Q  208 acccg 212  Q
    |||||    
T  25099267 acccg 25099263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 25158557 - 25158353
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||     
T  25158557 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgag 25158458  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  25158457 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatg 25158358  T
Q  208 acccg 212  Q
    |||||    
T  25158357 acccg 25158353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 29275622 - 29275817
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||     
T  29275622 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgag 29275721  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgta 203  Q
    |||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  29275722 gttcgaattccaacatctgcatatatttgggaccacatgtttcattctctttgatatgcattgaaatttgtttttgtctattacatctacaatgta 29275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 5479194 - 5479427
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||     
T  5479194 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgag 5479293  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||| ||||||||||||| ||||| ||| ||||| ||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  5479294 gttcgaattccaacatctacatatatttgggatcacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatg 5479393  T
Q  208 acccgcacaggtacacaggtggaaagtctagtta 241  Q
    |||||  |    ||||||||| ||||||||||||    
T  5479394 acccgtgcgacaacacaggtgaaaagtctagtta 5479427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 27647928 - 27648117
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  27647928 ccaacaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 27648027  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctac 197  Q
    |||| |||| ||||||||| |||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  27648028 gttcgaattccaacatctgtatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctac 27648117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 1395987 - 1396191
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||     
T  1395987 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgactgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 1396086  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||||| |||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||| |||||||| | |||||||||    
T  1396087 gttcgaattccaacatctgcagatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctgcaatgtatatg 1396186  T
Q  208 acccg 212  Q
    |||||    
T  1396187 acccg 1396191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 34107569 - 34107336
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  34107569 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34107470  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  34107469 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34107370  T
Q  208 acccgcacaggtacacaggtggaaagtctagtta 241  Q
    |||||  | |   ||| |||||||||||||||||    
T  34107369 acccgtgcggcagcacgggtggaaagtctagtta 34107336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 20874686 - 20874890
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  20874686 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 20874785  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  20874786 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 20874885  T
Q  208 acccg 212  Q
    |||||    
T  20874886 acccg 20874890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 24223395 - 24223191
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||| ||||||||| |||| | |||||||||||| |||||||||||||||||||||     
T  24223395 ccaataatatcacattgacatatacttttaacaaaagaatgaagtaacacacgattggtaaagagtaatatttttaaggtgaataagtgtggtgtctgag 24223296  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  24223295 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttcatatgcattgagatttgtttttgtctactacatctacgatgtatatg 24223196  T
Q  208 acccg 212  Q
    |||||    
T  24223195 acccg 24223191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 34110650 - 34110854
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  34110650 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34110749  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  34110750 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34110849  T
Q  208 acccg 212  Q
    |||||    
T  34110850 acccg 34110854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 38247096 - 38246892
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  38247096 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38246997  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  38246996 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38246897  T
Q  208 acccg 212  Q
    |||||    
T  38246896 acccg 38246892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 16526537 - 16526333
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  16526537 ccaataatataatattgacatataattttaacaaaagaacgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 16526438  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  16526437 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 16526338  T
Q  208 acccg 212  Q
    |||||    
T  16526337 acccg 16526333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 2399171 - 2398940
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  2399171 ccaataatataatattgacatataattttaacaaaagaatgaagtaa--cacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 2399074  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  2399073 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 2398974  T
Q  208 acccgcacaggtacacaggtggaaagtctagtta 241  Q
    |||||  | |   ||| |||||||||||||||||    
T  2398973 acccgtgcggcagcacgggtggaaagtctagtta 2398940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 8 - 197
Target Start/End: Complemental strand, 6940734 - 6940545
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | ||||||||||||||||| |||     
T  6940734 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacatacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 6940635  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctac 197  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  6940634 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctac 6940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 10729673 - 10729440
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||   ||||||||| |||||||||||     
T  10729673 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttttggtgaataagcgtggtgtctgag 10729574  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| || |||||||||||| |||||||||||||||||| |||||| |||||||||    
T  10729573 gttcgaattccaacatctgcatatatttgggaccacatatttcattctcttggatatgcattgagatttgtttttgtctactatatctacaatgtatatg 10729474  T
Q  208 acccgcacaggtacacaggtggaaagtctagtta 241  Q
    |||||  | |   ||| |||||||||||||||||    
T  10729473 acccgtgcggcagcacgggtggaaagtctagtta 10729440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 8 - 203
Target Start/End: Complemental strand, 17373395 - 17373200
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  17373395 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 17373296  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgta 203  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||    
T  17373295 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgta 17373200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 33570538 - 33570342
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  33570538 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33570439  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtat 204  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| |||| |||||||||| |||||||||||||||||| |||||| ||||||    
T  33570438 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttggtatgcattgagatttgtttttgtctactatatctacaatgtat 33570342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 1394717 - 1394541
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| |||     
T  1394717 ccaataatataacattgacatataaatttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaacaagtgtggtgtttgag 1394618  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgt 184  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||    
T  1394617 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 1394541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 17913744 - 17913907
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttca 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| | ||| ||||     
T  17913744 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaagattaatatttttaaggtgaataagtgtggtatttgaggttcg 17913843  T
Q  113 aatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatattt 176  Q
    |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  17913844 aattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagattt 17913907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 8 - 190
Target Start/End: Complemental strand, 14141338 - 14141156
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  14141338 ccaataatataatattggcatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 14141239  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctacta 190  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||    
T  14141238 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 14141156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 40177120 - 40177243
Alignment:
Q  89 aataagtgtggtgtctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctac 188  Q
    |||||| ||||||||||| |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||| ||||||||||||||||    
T  40177120 aataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttttatatgcattgagatttgtttttgtctac 40177219  T
Q  189 tacatctacgatgtatatgacccg 212  Q
    || |||||| ||||||||||||||    
T  40177220 tatatctacaatgtatatgacccg 40177243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 6892929 - 6892887
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  6892929 ttatgaattaaaaatatccttttatgtaattttacatctatca 6892887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 1395907 - 1395948
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  1395907 aatataacattaacatataatttttacaaaagaatgaagtaa 1395948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 2399253 - 2399212
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  2399253 aatataacattaacatataatttttacaaaagaatgaagtaa 2399212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 5479115 - 5479156
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  5479115 aatataacattaacatataatttttacaaaagaatgaagtaa 5479156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 6940811 - 6940770
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  6940811 aatataacattaacatataatttttacaaaagaatgaagtaa 6940770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 10729755 - 10729714
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  10729755 aatataacattaacatataatttttacaaaagaatgaagtaa 10729714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 14141420 - 14141379
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  14141420 aatataacattaacatataatttttacaaaagaatgaagtaa 14141379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 16526620 - 16526579
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  16526620 aatataacattaacatataatttttacaaaagaatgaagtaa 16526579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 17373477 - 17373436
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  17373477 aatataacattaacatataatttttacaaaagaatgaagtaa 17373436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 20874604 - 20874645
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  20874604 aatataacattaacatataatttttacaaaagaatgaagtaa 20874645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 24223477 - 24223436
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  24223477 aatataacattaacatataatttttacaaaagaatgaagtaa 24223436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 27647845 - 27647886
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  27647845 aatataacattaacatataatttttacaaaagaatgaagtaa 27647886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 33570621 - 33570580
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  33570621 aatataacattaacatataatttttacaaaagaatgaagtaa 33570580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 34107651 - 34107610
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  34107651 aatataacattaacatataatttttacaaaagaatgaagtaa 34107610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 34110566 - 34110607
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  34110566 aatataacattaacatataatttttacaaaagaatgaagtaa 34110607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 38247178 - 38247137
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  38247178 aatataacattaacatataatttttacaaaagaatgaagtaa 38247137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 40177033 - 40177074
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  40177033 aatataacattaacatataatttttacaaaagaatgaagtaa 40177074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 1394793 - 1394752
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    |||||||||||  ||||||||||| |||||||||||||||||    
T  1394793 aatataacattaccatataatttttacaaaagaatgaagtaa 1394752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 25158637 - 25158596
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  25158637 aatataacattaacatataatttttacaaaataatgaagtaa 25158596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 33375680 - 33375721
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  33375680 aatataacattaacatataatttttacaaaataatgaagtaa 33375721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 4876363 - 4876407
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaat 283  Q
    ||||||||| ||||| || |||||| |||||||||||||||||||    
T  4876363 ttatgaatttaaaatgtcattttatgtaattttacatctatcaat 4876407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 29275540 - 29275580
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagta 53  Q
    ||||||||||| ||||||| |||| ||||||||||||||||    
T  29275540 aatataacattaacatatattttttacaaaagaatgaagta 29275580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 1e-90; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 37591035 - 37590831
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||     
T  37591035 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 37590936  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||| |||||||||    
T  37590935 gttcgaatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtctactacatctacaatgtatatg 37590836  T
Q  208 acccg 212  Q
    |||||    
T  37590835 acccg 37590831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 44376310 - 44376106
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  44376310 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 44376211  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  44376210 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 44376111  T
Q  208 acccg 212  Q
    |||||    
T  44376110 acccg 44376106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 41387124 - 41387328
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||     
T  41387124 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgatcgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 41387223  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  41387224 gttcgaatttcagcatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41387323  T
Q  208 acccg 212  Q
    |||||    
T  41387324 acccg 41387328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 46256032 - 46256236
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||     
T  46256032 ccaataatataacattgacatataattttaacaaaagaatgaagtaagatacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 46256131  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  46256132 gttccaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 46256231  T
Q  208 acccg 212  Q
    |||||    
T  46256232 acccg 46256236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 14 - 241
Target Start/End: Complemental strand, 16905177 - 16904950
Alignment:
Q  14 atataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttcaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||| |    
T  16905177 atataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 16905078  T
Q  114 atttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccgc 213  Q
    ||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||     
T  16905077 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgt 16904978  T
Q  214 acaggtacacaggtggaaagtctagtta 241  Q
     | |   ||| |||||||||||||||||    
T  16904977 gcggcagcacgggtggaaagtctagtta 16904950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 45977221 - 45977017
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||     
T  45977221 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45977122  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  45977121 gttcgaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgatatttatttttatctactacatctacgatgtatatg 45977022  T
Q  208 acccg 212  Q
    |||||    
T  45977021 acccg 45977017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 33139702 - 33139498
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||     
T  33139702 ccaataatataacattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataaatgtggtgtctgag 33139603  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||||||||||||||||| |||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  33139602 gttcgaattccaacatctgcatatatttgggacaacatatttaattctctttgatatgcattgagatttgtttttgtctactaaatctacaatgtatatg 33139503  T
Q  208 acccg 212  Q
    |||||    
T  33139502 acccg 33139498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 16918119 - 16917886
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  16918119 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 16918020  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  16918019 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 16917920  T
Q  208 acccgcacaggtacacaggtggaaagtctagtta 241  Q
    |||||  | |   |||||||||||||||||||||    
T  16917919 acccgtgcggcagcacaggtggaaagtctagtta 16917886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 8 - 242
Target Start/End: Original strand, 52434622 - 52434856
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  52434622 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 52434721  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  52434722 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 52434821  T
Q  208 acccgcacaggtacacaggtggaaagtctagttat 242  Q
    |||||  | |   ||| ||||||||||||||||||    
T  52434822 acccgtgcggcagcacgggtggaaagtctagttat 52434856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 30825153 - 30824949
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  30825153 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 30825054  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||| ||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  30825053 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 30824954  T
Q  208 acccg 212  Q
    |||||    
T  30824953 acccg 30824949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 31628718 - 31628514
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||| |||     
T  31628718 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtatgag 31628619  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||||||||||||| |||||||| ||| ||||| ||||||||||||||| || ||||||||||||| |||||||| |||||||||    
T  31628618 gttcgaattccaacatctgcatatatttgagaccacatatttaattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatg 31628519  T
Q  208 acccg 212  Q
    |||||    
T  31628518 acccg 31628514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 53143493 - 53143289
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  53143493 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 53143394  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||| || |||||| |||||||||    
T  53143393 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 53143294  T
Q  208 acccg 212  Q
    |||||    
T  53143293 acccg 53143289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 52098422 - 52098217
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaatt-aatatttttaaagtgaataagtgtggtgtctga 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  52098422 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatttaatatttttaaggtgaataagtgttgtgtctga 52098323  T
Q  107 agttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatat 206  Q
    ||||  |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||| ||||||||||||| || |||  |||||||    
T  52098322 agtttgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatttacagtgtatat 52098223  T
Q  207 gacccg 212  Q
    ||||||    
T  52098222 gacccg 52098217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 35760585 - 35760780
Alignment:
Q  14 atataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttcaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||| |||| |    
T  35760585 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataattgtggtgtttgaggttcga 35760684  T
Q  114 atttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgac 209  Q
    ||| |||||||||||||||||||||||||||| ||| ||||| |||||||| |||||| |||| ||||| ||||||| |||||| |||||||||||    
T  35760685 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttatttttatctactatatctacaatgtatatgac 35760780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 37651664 - 37651868
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| ||||||| |||     
T  37651664 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgag 37651763  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||||||||||||| |||||||| ||| ||||| ||| ||||||||||| |||||||||||||||||| |||||| |||||||||    
T  37651764 gttcgaattccaacatctgcatatatttgagaccacatatttcattctctttcatatgcattgagatttgtttttgtctactatatctacaatgtatatg 37651863  T
Q  208 acccg 212  Q
    |||||    
T  37651864 acccg 37651868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 39058588 - 39058384
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||     
T  39058588 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacatgattgataaaaattaatatttttaaggtgaataagtgtggtatctgag 39058489  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||  |||||||||||||||||| ||| ||||| ||||||||  ||| | |||||||||||||||||| |||||| |||||||||    
T  39058488 gttcgaattccaacatcttgatatatttgggaccacatatttcattctctttgatatatattaaaatttgtttttgtctactatatctacaatgtatatg 39058389  T
Q  208 acccg 212  Q
    |||||    
T  39058388 acccg 39058384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 48118762 - 48118564
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||| |||     
T  48118762 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattggtaaaaattaatatttttaaggtgaatacgtgtggtgtttgag 48118663  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||| |||||||   |||||||||| |||||||||    
T  48118662 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgt---ctacatctacaatgtatatg 48118566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 8 - 190
Target Start/End: Complemental strand, 45782660 - 45782478
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  45782660 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45782561  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctacta 190  Q
    ||||||||| |||||||| ||||||||| ||||||||| ||| ||||| ||||||||  ||||| |||| |||||||||||||    
T  45782560 gttcaaattccaacatcttcatatatttaggaccacatatttcattctctttgatatatattgagatttatttttgtctacta 45782478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 12090691 - 12090486
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctga 106  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    |||||||| |||||||||||    
T  12090691 ccaataatataatattgacatataattttaacaaaagaaatgaagtaacacacgattgataaaaattaatattttttggttgaataagcgtggtgtctga 12090592  T
Q  107 agttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatat 206  Q
     |||| |||| |||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  12090591 ggttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 12090492  T
Q  207 gacccg 212  Q
    ||||||    
T  12090491 gacccg 12090486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 31966200 - 31965996
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  31966200 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 31966101  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||| ||| ||| || || |||||| |||||||||    
T  31966100 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttatgtataataaatctacaatgtatatg 31966001  T
Q  208 acccg 212  Q
    |||||    
T  31966000 acccg 31965996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 8 - 210
Target Start/End: Complemental strand, 47143031 - 47142829
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||| ||||||||| |||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| |||||||||  ||||||||||     
T  47143031 ccaataatttaacattgagatataattttaacaaaagaatgaagtaacacacaatcgataaaaattaatatttttaaggtgaataagcatggtgtctgag 47142932  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| ||||  |||||||||||||||||| |||||||| | | ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  47142931 gttcgaattctaacatctgcatatatttgagaccacatatgtcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 47142832  T
Q  208 acc 210  Q
    |||    
T  47142831 acc 47142829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 54624955 - 54625152
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||| |      |||||||||||||||||||||| |||||||||||||||||||||     
T  54624955 ccaataatataacattgacatataattttaacaaa-gaatgaagtaaca------tgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 54625047  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||| | ||||||||||||||||||| ||||| ||||||||     
T  54625048 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacgtctacaatgtatata 54625147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 50229933 - 50229768
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaa-ttaatatttttaaagtgaataagtgtggtgtctgaagttc 111  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| |||||||||| |||||||||| ||||    
T  50229933 aatataacattgacatataattttaacaaaagaatgaagtaacacactattgataaaaaattaatatttttaaggtgaataagtatggtgtctgaggttc 50229834  T
Q  112 aaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttg 177  Q
     |||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| |||||    
T  50229833 gaattccaacatctgcatatattttggaccacatgtttcattctctttgatatgcattgagatttg 50229768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 50229760 - 50229714
Alignment:
Q  151 attctatttgatatgcattgatatttgtttttgtctactacatctac 197  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  50229760 attctctttgatatgcattgagatttttttttgtctactacatctac 50229714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 12090773 - 12090732
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  12090773 aatataacattaacatataatttttacaaaagaatgaagtaa 12090732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 16905261 - 16905220
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  16905261 aatataacattaacatataatttttacaaaagaatgaagtaa 16905220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 16918201 - 16918160
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  16918201 aatataacattaacatataatttttacaaaagaatgaagtaa 16918160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 30825235 - 30825194
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  30825235 aatataacattaacatataatttttacaaaagaatgaagtaa 30825194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 31966282 - 31966241
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  31966282 aatataacattaacatataatttttacaaaagaatgaagtaa 31966241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 39058665 - 39058624
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  39058665 aatataacattaacatataatttttacaaaagaatgaagtaa 39058624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 45977307 - 45977266
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  45977307 aatataacattaacatataatttttacaaaagaatgaagtaa 45977266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 47143113 - 47143072
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  47143113 aatataacattaacatataatttttacaaaagaatgaagtaa 47143072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 48118845 - 48118804
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  48118845 aatataacattaacatataatttttacaaaagaatgaagtaa 48118804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 52098503 - 52098462
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  52098503 aatataacattaacatataatttttacaaaagaatgaagtaa 52098462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 52434540 - 52434581
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  52434540 aatataacattaacatataatttttacaaaagaatgaagtaa 52434581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 53143577 - 53143536
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  53143577 aatataacattaacatataatttttacaaaagaatgaagtaa 53143536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 54624879 - 54624920
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  54624879 aatataacattaacatataatttttacaaaagaatgaagtaa 54624920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 50230019 - 50229979
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagta 53  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  50230019 aatataacattaacatataatttttacaaaagaatgaagta 50229979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 23164133 - 23164176
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaa 282  Q
    ||||||||||||||| || |||||| ||||||||||||||||||    
T  23164133 ttatgaattaaaaatgtcattttatgtaattttacatctatcaa 23164176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 6183838 - 6183776
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaaccactgattt 301  Q
    ||||||||||| ||| ||||||||| ||||||||||| ||||| ||| || ||||||| ||||    
T  6183838 ttatgaattaagaatgtctttttatttaattttacatttatcagttagttgaaccactaattt 6183776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 29627736 - 29627694
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  29627736 ttatgaattaaaaatgtccttttatgtaattttacatctatca 29627694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 33510007 - 33510049
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  33510007 ttatgaattaaaaatgtccttttatgtaattttacatctatca 33510049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 35842276 - 35842234
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  35842276 ttatgaattaaaaatgtccttttatgtaattttacatctatca 35842234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 40120527 - 40120589
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaaccactgattt 301  Q
    ||||||||||| |||||| |||||| | ||||||||| ||||| ||| |||||||||| ||||    
T  40120527 ttatgaattaataatatccttttatgtcattttacatttatcagttagttaaaccactaattt 40120589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 48056259 - 48056198
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaaccactgattt 301  Q
    ||||||||||||| | ||||||||||| ||||||||| ||||||||| || ||||||| ||||    
T  48056259 ttatgaattaaaa-tgtctttttatatcattttacatttatcaattagttgaaccactaattt 48056198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 41387042 - 41387083
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  41387042 aatataacattaacatataatttttacaaaataatgaagtaa 41387083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 44376390 - 44376349
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  44376390 aatataacattaacatataatttttacaaaataatgaagtaa 44376349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 169; Significance: 1e-90; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 4584665 - 4584461
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  4584665 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 4584566  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  4584565 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 4584466  T
Q  208 acccg 212  Q
    |||||    
T  4584465 acccg 4584461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 8 - 237
Target Start/End: Original strand, 39146438 - 39146667
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  39146438 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39146537  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  39146538 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatg 39146637  T
Q  208 acccgcacaggtacacaggtggaaagtcta 237  Q
    |||||  | |  |||||| |||||||||||    
T  39146638 acccgtgcggcaacacagatggaaagtcta 39146667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 36076685 - 36076481
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36076685 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaa 36076586  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  36076585 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatg 36076486  T
Q  208 acccg 212  Q
    |||||    
T  36076485 acccg 36076481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 20671247 - 20671448
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  20671247 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 20671346  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  20671347 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 20671446  T
Q  208 ac 209  Q
    ||    
T  20671447 ac 20671448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 26948796 - 26949000
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||     
T  26948796 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgag 26948895  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  26948896 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 26948995  T
Q  208 acccg 212  Q
    |||||    
T  26948996 acccg 26949000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 45558115 - 45557882
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  45558115 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45558016  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  45558015 gttcgaatttcaacatctgcatatacttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatg 45557916  T
Q  208 acccgcacaggta-cacaggtggaaagtctagtta 241  Q
    ||| | || |||| ||| |||||||||||||||||    
T  45557915 acctgtac-ggtagcactggtggaaagtctagtta 45557882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 31488409 - 31488613
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  31488409 ccaataatataacattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 31488508  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||||||||||||||||| |||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||     
T  31488509 gttcgaattccaacatctgcatatatttgggacaacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatata 31488608  T
Q  208 acccg 212  Q
    |||||    
T  31488609 acccg 31488613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 38654158 - 38653924
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  38654158 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38654059  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  38654058 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38653959  T
Q  208 acccgcacaggtacacaggtggaaagtctagttat 242  Q
    |||||  | |   ||| ||||||||||||||||||    
T  38653958 acccgtgcggcagcacgggtggaaagtctagttat 38653924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 3898420 - 3898624
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  3898420 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 3898519  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||| |||||||||||||||||| |||||| |||||||||    
T  3898520 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactatatctacaatgtatatg 3898619  T
Q  208 acccg 212  Q
    |||||    
T  3898620 acccg 3898624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 12264198 - 12264402
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  12264198 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 12264297  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  12264298 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 12264397  T
Q  208 acccg 212  Q
    |||||    
T  12264398 acccg 12264402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 43363842 - 43363638
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  43363842 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 43363743  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  43363742 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 43363643  T
Q  208 acccg 212  Q
    |||||    
T  43363642 acccg 43363638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 49672560 - 49672764
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  49672560 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 49672659  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  49672660 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 49672759  T
Q  208 acccg 212  Q
    |||||    
T  49672760 acccg 49672764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 1941951 - 1941747
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| ||| |||||||     
T  1941951 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtgatgtctgag 1941852  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  1941851 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 1941752  T
Q  208 acccg 212  Q
    |||||    
T  1941751 acccg 1941747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 21098302 - 21098506
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  21098302 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21098401  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||| || |||||| |||||||||    
T  21098402 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 21098501  T
Q  208 acccg 212  Q
    |||||    
T  21098502 acccg 21098506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 24119205 - 24119397
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  24119205 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 24119304  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgat 200  Q
    |||  |||| ||||||||||||||||||||||||| || ||| ||| | ||| ||||||||||| ||||||||||||||||||||||||||||    
T  24119305 gtttgaattccaacatctgcatatatttgggaccatatatttcattatctttaatatgcattgagatttgtttttgtctactacatctacgat 24119397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 34121353 - 34121557
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  34121353 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34121452  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||| | ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  34121453 gttcgaattccaacatctgcatatatttgggaccacgtatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34121552  T
Q  208 acccg 212  Q
    |||||    
T  34121553 acccg 34121557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 49506580 - 49506376
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  49506580 ccaataatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 49506481  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  49506480 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 49506381  T
Q  208 acccg 212  Q
    |||||    
T  49506380 acccg 49506376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 54073025 - 54073220
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  54073025 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 54073124  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgta 203  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||    
T  54073125 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgta 54073220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 55041820 - 55041610
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaat------taatatttttaaagtgaataagtgtggtg 101  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||      |||||||||||| ||||||||||||||||    
T  55041820 ccaataatataacattgacatataattttaacaaaagagtgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtg 55041721  T
Q  102 tctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatg 201  Q
    ||||| |||| ||||  ||||||||||||||||||| ||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||    
T  55041720 tctgaggttcgaattcaaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatg 55041621  T
Q  202 tatatgacccg 212  Q
    |||||||||||    
T  55041620 tatatgacccg 55041610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 49478206 - 49478407
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  49478206 ccaataatataacattgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 49478305  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||| ||||||||||||||||||||| ||| ||| | ||||||||| ||||| |||||||||| |||||||| ||||| ||||| |||    
T  49478306 gttcgaattccaacatttgcatatatttgggaccacatatttcattatctttgatatgtattgagatttgtttttatctactacgtctacaatgtaaatg 49478405  T
Q  208 ac 209  Q
    ||    
T  49478406 ac 49478407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 56 - 212
Target Start/End: Complemental strand, 40014836 - 40014680
Alignment:
Q  56 acacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattct 155  Q
    |||||||||||||||||||||||||||   ||||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||||| ||| |||||    
T  40014836 acacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattct 40014737  T
Q  156 atttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
     ||||||||||||||| |||||||||||| || || |||||| ||||||||||||||    
T  40014736 ctttgatatgcattgagatttgtttttgtttattatatctacaatgtatatgacccg 40014680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 73 - 207
Target Start/End: Complemental strand, 26051469 - 26051334
Alignment:
Q  73 taatatttttaaagtgaataagtgtggtgtctgaagttcaaatttcaacatctgcatatatttggg-accacatgttttattctatttgatatgcattga 171  Q
    |||||||||||| ||||||||| ||||||||||| |||| |||| |||| || ||||||||||||| ||||||| ||| ||||| |||||||||||||||    
T  26051469 taatatttttaaggtgaataagcgtggtgtctgaggttcgaattccaacctcagcatatatttggggaccacatatttcattctctttgatatgcattga 26051370  T
Q  172 tatttgtttttgtctactacatctacgatgtatatg 207  Q
     ||||||||||||||||||||||||| |||||||||    
T  26051369 gatttgtttttgtctactacatctacaatgtatatg 26051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 26052309 - 26052236
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttt 81  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26052309 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttt 26052236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 6460273 - 6460166
Alignment:
Q  133 tttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccgcacaggtacacaggtggaaa 232  Q
    ||||||||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||  | |   ||| ||||||||    
T  6460273 tttgggaccacatattttattct-tttgatatgtattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaa 6460175  T
Q  233 gtctagtta 241  Q
    |||||||||    
T  6460174 gtctagtta 6460166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 2122576 - 2122625
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaatt 288  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||    
T  2122576 ttatgaattaaaaatgtcattttatgtaattttacatctatcaattaatt 2122625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 37318531 - 37318599
Alignment:
Q  66 taaaaattaatatttttaaagtgaataagtgtggtgtctgaagttcaaatttcaacatctgcatatatt 134  Q
    |||||||| || ||||||||||||||||||| | |||| |||||||||| ||| || ||||||||||||    
T  37318531 taaaaattcatttttttaaagtgaataagtgagttgtccgaagttcaaacttcgacctctgcatatatt 37318599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 36076764 - 36076721
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaaga 56  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  36076764 aatataacattaacatataatttttacaaaagaatgaagtaaga 36076721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 35100871 - 35100913
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  35100871 ttatgaattaaaaatatccttttatgtaattttacatctatca 35100913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 41246939 - 41247001
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaaccactgattt 301  Q
    ||||||||||||||| || |||||| |||||||||||||||||  ||||| ||||||| ||||    
T  41246939 ttatgaattaaaaatgtccttttatgtaattttacatctatcagctaattgaaccactaattt 41247001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 1942033 - 1941992
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  1942033 aatataacattaacatataatttttacaaaagaatgaagtaa 1941992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 3898338 - 3898379
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  3898338 aatataacattaacatataatttttacaaaagaatgaagtaa 3898379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 12264115 - 12264156
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  12264115 aatataacattaacatataatttttacaaaagaatgaagtaa 12264156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 20671166 - 20671207
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  20671166 aatataacattaacatataatttttacaaaagaatgaagtaa 20671207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 21098219 - 21098260
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  21098219 aatataacattaacatataatttttacaaaagaatgaagtaa 21098260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 26052392 - 26052351
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  26052392 aatataacattaacatataatttttacaaaagaatgaagtaa 26052351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 26948689 - 26948730
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  26948689 aatataacattaacatataatttttacaaaagaatgaagtaa 26948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 31488329 - 31488370
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  31488329 aatataacattaacatataatttttacaaaagaatgaagtaa 31488370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 32982027 - 32981978
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaatt 288  Q
    ||||||||||||||||||  ||||| |||||||||||||||||| |||||    
T  32982027 ttatgaattaaaaatatccgtttatgtaattttacatctatcaactaatt 32981978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 34121271 - 34121312
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  34121271 aatataacattaacatataatttttacaaaagaatgaagtaa 34121312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 38654241 - 38654200
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  38654241 aatataacattaacatataatttttacaaaagaatgaagtaa 38654200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 43363924 - 43363883
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  43363924 aatataacattaacatataatttttacaaaagaatgaagtaa 43363883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 49478124 - 49478165
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  49478124 aatataacattaacatataatttttacaaaagaatgaagtaa 49478165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 49672478 - 49672519
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  49672478 aatataacattaacatataatttttacaaaagaatgaagtaa 49672519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 55041901 - 55041860
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  55041901 aatataacattaacatataatttttacaaaagaatgaagtaa 55041860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 30813731 - 30813689
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  30813731 ttatgaattaaaaatgtcattttatgtaattttacatctatca 30813689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 42463551 - 42463497
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaacc 293  Q
    ||||||||||||||| |  |||||| ||||||||||||||||| |||||| ||||    
T  42463551 ttatgaattaaaaatgttcttttatgtaattttacatctatcagttaattgaacc 42463497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 42497712 - 42497754
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    |||||||||||||||||| |||||| ||||||| |||||||||    
T  42497712 ttatgaattaaaaatatccttttatctaattttgcatctatca 42497754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 45692831 - 45692789
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  45692831 ttatgaattaaaaatgtcattttatgtaattttacatctatca 45692789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 47175070 - 47175112
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  47175070 ttatgaattaaaaatgtccttttatgtaattttacatctatca 47175112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 51709702 - 51709756
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaacc 293  Q
    ||||||||||||||| || |||||| |||||||| ||||||||| ||||| ||||    
T  51709702 ttatgaattaaaaatgtccttttatgtaattttatatctatcaactaattgaacc 51709756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 51990290 - 51990248
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||||||||||||| | ||||| |||||||||    
T  51990290 ttatgaattaaaaatatctttttatgttattttgcatctatca 51990248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 52226013 - 52226055
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  52226013 ttatgaattaaaaatgtcattttatgtaattttacatctatca 52226055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 24119126 - 24119167
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    |||||||| || |||||||||||| |||||||||||||||||    
T  24119126 aatataactttaacatataatttttacaaaagaatgaagtaa 24119167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 39146363 - 39146404
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  39146363 aatataacattaacatataatttttacaaaataatgaagtaa 39146404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 45558196 - 45558155
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  45558196 aatataacattaacatataatttttacaaaaaaatgaagtaa 45558155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 4e-88; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 39257441 - 39257645
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  39257441 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39257540  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  39257541 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 39257640  T
Q  208 acccg 212  Q
    |||||    
T  39257641 acccg 39257645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 11725188 - 11725420
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  11725188 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 11725287  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||||||||||||| |||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  11725288 gttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 11725387  T
Q  208 acccgcacaggtacacaggtggaaagtctagtt 240  Q
    |||||  |||   ||| ||||||||||||||||    
T  11725388 acccgtgcagcagcacgggtggaaagtctagtt 11725420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 40026798 - 40027002
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  40026798 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 40026897  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||| | ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  40026898 gttcaaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 40026997  T
Q  208 acccg 212  Q
    |||||    
T  40026998 acccg 40027002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 18568863 - 18569067
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||| |||     
T  18568863 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtttgag 18568962  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || ||||||||||||| |||||||| |||||||||    
T  18568963 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatg 18569062  T
Q  208 acccg 212  Q
    |||||    
T  18569063 acccg 18569067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 24004958 - 24004779
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||     
T  24004958 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 24004859  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtcta 187  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||    
T  24004858 gttcgaatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtcta 24004779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 14 - 212
Target Start/End: Original strand, 28582859 - 28583057
Alignment:
Q  14 atataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttcaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |    
T  28582859 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 28582958  T
Q  114 atttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
    ||| ||||||||||||||||||| |||||||| ||| ||||| |||||||| |||||| |||||||||| |||||||||||||| ||||||||||||||    
T  28582959 attccaacatctgcatatatttgagaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccg 28583057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 44832417 - 44832183
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  44832417 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 44832318  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  44832317 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 44832218  T
Q  208 acccgcacaggtacacaggtggaaagtctagttat 242  Q
    |||||  | |  |||| ||||||||||||||||||    
T  44832217 acccgtgcggcaacacgggtggaaagtctagttat 44832183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 24408874 - 24409078
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||     
T  24408874 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgat 24408973  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||| | ||||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  24408974 gttcgaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattaagatttgtttttatctactacatctacaatgtatatg 24409073  T
Q  208 acccg 212  Q
    |||||    
T  24409074 acccg 24409078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 28274445 - 28274245
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||     
T  28274445 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgag 28274346  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||| ||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  28274345 gttcgaattccaacatctgcgtatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctacaatgtatatg 28274246  T
Q  208 a 208  Q
    |    
T  28274245 a 28274245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 35122543 - 35122349
Alignment:
Q  18 aacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttcaaattt 117  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||||     
T  35122543 aacattgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaattc 35122444  T
Q  118 caacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
    |||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  35122443 caacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 35122349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 15961130 - 15961334
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  15961130 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 15961229  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  15961230 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 15961329  T
Q  208 acccg 212  Q
    |||||    
T  15961330 acccg 15961334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 18841902 - 18842106
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||||||||||||||||     
T  18841902 ccaataatataacattgacatataattttaacaaaagaatgaagtaacatacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 18842001  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
     ||| |||| |||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  18842002 attcgaattccaacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatg 18842101  T
Q  208 acccg 212  Q
    |||||    
T  18842102 acccg 18842106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 18997698 - 18997902
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  18997698 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 18997797  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  18997798 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18997897  T
Q  208 acccg 212  Q
    |||||    
T  18997898 acccg 18997902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 30474115 - 30473911
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  30474115 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 30474016  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  30474015 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 30473916  T
Q  208 acccg 212  Q
    |||||    
T  30473915 acccg 30473911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 8 - 191
Target Start/End: Original strand, 19240661 - 19240844
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||     
T  19240661 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgag 19240760  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactac 191  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||||    
T  19240761 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactac 19240844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 8 - 191
Target Start/End: Original strand, 19313845 - 19314028
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||     
T  19313845 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgag 19313944  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactac 191  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||||    
T  19313945 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactac 19314028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 18175379 - 18175612
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||   |||||||||||||||||||||     
T  18175379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgtttgataataattaatatttttttggtgaataagtgtggtgtctgag 18175478  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  18175479 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18175578  T
Q  208 acccgcacaggtacacaggtggaaagtctagtta 241  Q
    |||||  | |   ||| |||||||||||||||||    
T  18175579 acccgtgcggcagcacgggtggaaagtctagtta 18175612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 32111092 - 32110859
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  32111092 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 32110993  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||| ||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  32110992 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 32110893  T
Q  208 acccgcacaggtacacaggtggaaagtctagtta 241  Q
    |||||  | |   ||| |||||||||||||||||    
T  32110892 acccgtgcggcagcacgggtggaaagtctagtta 32110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 6299251 - 6299047
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  6299251 ccaataatataatattgacatataattttaacaaaggaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 6299152  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  6299151 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 6299052  T
Q  208 acccg 212  Q
    |||||    
T  6299051 acccg 6299047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 10477935 - 10478139
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  10477935 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 10478034  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||||||||||||| |||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  10478035 gttcgaattccaacatctgcatatatttgtgaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 10478134  T
Q  208 acccg 212  Q
    |||||    
T  10478135 acccg 10478139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 13 - 207
Target Start/End: Complemental strand, 18210850 - 18210656
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttca 112  Q
    |||||||||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  18210850 aatataacattgacatataactttaacaaaagaaggaaataacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 18210751  T
Q  113 aatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| ||||||||||||||||||| |||||||| ||| ||||| ||||||||||||||| |||| ||||||||||||| |||||| |||||||||    
T  18210750 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatctacaatgtatatg 18210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 19412829 - 19413019
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaa-gaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctga 106  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  19412829 ccaataatataacattgacatataattttaacaaaaagaatgaagtaacacacgatggataaaaattaatatttttaaggtgaataactgtggtgtctga 19412928  T
Q  107 agttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctac 197  Q
     |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  19412929 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctac 19413019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 996046 - 995842
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||   ||||||||| |||||||||||     
T  996046 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttttggtgaataagcgtggtgtctgag 995947  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  995946 gttcgaattccaacatatgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 995847  T
Q  208 acccg 212  Q
    |||||    
T  995846 acccg 995842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 44836907 - 44837111
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||| ||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| |||||||||||     
T  44836907 ccaataatttaacattgagatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgag 44837006  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||| ||||||||| ||||||||| ||||||||| ||||| |||| |||||||||||||||||||| ||||||||     
T  44837007 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgtattgagatttatttttgtctactacatctacaatgtatata 44837106  T
Q  208 acccg 212  Q
    |||||    
T  44837107 acccg 44837111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 11142459 - 11142665
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataa------aaattaatatttttaaagtgaataagtgtggtg 101  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||      |||||||||||||||| ||||||||||||||||    
T  11142459 ccaataatataacactgacatataattttaacaaaagaatgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtg 11142558  T
Q  102 tctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatg 201  Q
    ||||| |||| |||| |||||||||||||||||||||| ||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||    
T  11142559 tctgaggttcgaattccaacatctgcatatatttgggagcacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatg 11142658  T
Q  202 tatatga 208  Q
    |||||||    
T  11142659 tatatga 11142665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 39997726 - 39997893
Alignment:
Q  45 aatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttcaaatttcaacatctgcatatatttgggaccaca 144  Q
    |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||    
T  39997726 aatgaagtaacacacgattgataaaaattaatattttaaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccaca 39997825  T
Q  145 tgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
    | ||| ||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  39997826 tatttcattctctttgatatacattgagatttgtttttgtctactacatctacaatgtatatgacccg 39997893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 25875530 - 25875322
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgt---------- 97  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||              
T  25875530 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgttttattctct 25875431  T
Q  98 ----ggtgtctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacat 193  Q
          ||||||| |||| |||| || ||||||||||     |||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||| ||    
T  25875430 ttaatatgtctgaggttcgaattccagcatctgcata-----gggagcacatgttttattctctttaatatgcattgagatttgtttttgtctactatat 25875336  T
Q  194 ctacgatgtatatg 207  Q
    ||||||||||||||    
T  25875335 ctacgatgtatatg 25875322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 23353808 - 23353688
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||||     
T  23353808 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaaggtgaataagtggggtgtctgag 23353709  T
Q  108 gttcaaatttcaacatctgca 128  Q
    |||| |||| |||||||||||    
T  23353708 gttcgaattccaacatctgca 23353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 18481991 - 18481929
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaa 70  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18481991 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaa 18481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 10653362 - 10653416
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaacc 293  Q
    ||||||||||||||| || |||||||||||||||||||||||| |||||| ||||    
T  10653362 ttatgaattaaaaatgtccttttatataattttacatctatcagttaattgaacc 10653416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 39997660 - 39997706
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||    
T  39997660 ccaataatataacattgacatataatttttacaaaagaatgaagtaa 39997706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 36590874 - 36590916
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  36590874 ttatgaattaaaaatatccttttatgtaattttacatctatca 36590916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 40552509 - 40552563
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaacc 293  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||| |||||| ||||    
T  40552509 ttatgaattaaaaatgtctttttatgtaattatacatctatcagttaattgaacc 40552563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 6299333 - 6299292
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  6299333 aatataacattaacatataatttttacaaaagaatgaagtaa 6299292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 10477853 - 10477894
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  10477853 aatataacattaacatataatttttacaaaagaatgaagtaa 10477894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 11142381 - 11142422
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  11142381 aatataacattaacatataatttttacaaaagaatgaagtaa 11142422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 11725106 - 11725147
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  11725106 aatataacattaacatataatttttacaaaagaatgaagtaa 11725147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 18175297 - 18175338
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  18175297 aatataacattaacatataatttttacaaaagaatgaagtaa 18175338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 18997616 - 18997657
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  18997616 aatataacattaacatataatttttacaaaagaatgaagtaa 18997657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 19240580 - 19240621
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  19240580 aatataacattaacatataatttttacaaaagaatgaagtaa 19240621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 19313764 - 19313805
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  19313764 aatataacattaacatataatttttacaaaagaatgaagtaa 19313805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 19412752 - 19412793
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  19412752 aatataacattaacatataatttttacaaaagaatgaagtaa 19412793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 23353889 - 23353848
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  23353889 aatataacattaacatataatttttacaaaagaatgaagtaa 23353848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 24408795 - 24408836
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  24408795 aatataacattaacatataatttttacaaaagaatgaagtaa 24408836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 30474196 - 30474155
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  30474196 aatataacattaacatataatttttacaaaagaatgaagtaa 30474155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 32111174 - 32111133
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  32111174 aatataacattaacatataatttttacaaaagaatgaagtaa 32111133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 35122628 - 35122587
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  35122628 aatataacattaacatataatttttacaaaagaatgaagtaa 35122587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 39997580 - 39997621
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  39997580 aatataacattaacatataatttttacaaaagaatgaagtaa 39997621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 44832500 - 44832459
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  44832500 aatataacattaacatataatttttacaaaagaatgaagtaa 44832459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 44836824 - 44836865
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  44836824 aatataacattaacatataatttttacaaaagaatgaagtaa 44836865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 18210935 - 18210895
Alignment:
Q  14 atataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  18210935 atataacattaacatataatttttacaaaagaatgaagtaa 18210895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 15278657 - 15278603
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaacc 293  Q
    ||||||||||||||| || |||||| ||||||||||| ||||| |||||| ||||    
T  15278657 ttatgaattaaaaatgtccttttatgtaattttacatttatcagttaattgaacc 15278603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 15459026 - 15458972
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaacc 293  Q
    ||||||||||||||| || |||||| ||||||||||| ||||| |||||| ||||    
T  15459026 ttatgaattaaaaatgtccttttatgtaattttacatttatcagttaattgaacc 15458972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 24666230 - 24666272
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  24666230 ttatgaattaaaaatgtccttttatgtaattttacatctatca 24666272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 996128 - 996087
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    |||| |||||| |||||||||||| |||||||||||||||||    
T  996128 aatacaacattaacatataatttttacaaaagaatgaagtaa 996087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 18841829 - 18841870
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| || ||||||||| |||||||||||||||||    
T  18841829 aatataacattaacgtataatttttacaaaagaatgaagtaa 18841870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 25875610 - 25875569
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  25875610 aatataacattaacatataatttttacaaaataatgaagtaa 25875569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 28582777 - 28582818
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| ||||| |||||| |||||||||||||||||    
T  28582777 aatataacattaacatacaatttttacaaaagaatgaagtaa 28582818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 39257362 - 39257399
Alignment:
Q  17 taacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  39257362 taacattaacatataatttttacaaaagaatgaagtaa 39257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 162; Significance: 2e-86; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 9216029 - 9216262
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||     
T  9216029 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtaaataagtgtggtgtctgag 9216128  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||| |||||| |||||||||    
T  9216129 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactatatctacaatgtatatg 9216228  T
Q  208 acccgcacaggtacacaggtggaaagtctagtta 241  Q
    |||||  | |   ||| |||||||||||||||||    
T  9216229 acccgtgcggcagcacgggtggaaagtctagtta 9216262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 39727978 - 39728167
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  39727978 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39728077  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctac 197  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  39728078 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctac 39728167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 38444629 - 38444832
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||| |||  |||||||||||||||||||||||| ||||||||||||||||||||||    
T  38444629 ccaataatataacattgacatataattttatcaaaagaatgaagtaacacattattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaa 38444728  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  38444729 gttcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 38444828  T
Q  208 accc 211  Q
    ||||    
T  38444829 accc 38444832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 7333942 - 7334146
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||     
T  7333942 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttatggtgaataagtgtggtgtctgag 7334041  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||  |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| || |||||     
T  7334042 gtttgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctaccatctatata 7334141  T
Q  208 acccg 212  Q
    |||||    
T  7334142 acccg 7334146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 18855463 - 18855260
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||     
T  18855463 ccaataatataacattgacatataattttaacaaaagaatgaagtaatacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 18855364  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||  |||||||||| ||||||| |||||||||    
T  18855363 gttcgaatttcaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttg-atttgtctactgcatctacaatgtatatg 18855265  T
Q  208 acccg 212  Q
    |||||    
T  18855264 acccg 18855260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 35614065 - 35614269
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||    
T  35614065 ccaataatatgacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtcttaa 35614164  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  35614165 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatttacaatgtatatg 35614264  T
Q  208 acccg 212  Q
    |||||    
T  35614265 acccg 35614269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 4266379 - 4266583
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  4266379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 4266478  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  4266479 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 4266578  T
Q  208 acccg 212  Q
    |||||    
T  4266579 acccg 4266583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 34888917 - 34888713
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  34888917 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34888818  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  34888817 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34888718  T
Q  208 acccg 212  Q
    |||||    
T  34888717 acccg 34888713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 38913978 - 38913774
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  38913978 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38913879  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  38913878 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38913779  T
Q  208 acccg 212  Q
    |||||    
T  38913778 acccg 38913774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 50151058 - 50151262
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  50151058 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 50151157  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  50151158 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 50151257  T
Q  208 acccg 212  Q
    |||||    
T  50151258 acccg 50151262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 23482938 - 23482737
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |||     
T  23482938 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 23482839  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| || || ||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  23482838 gttcgaattccaacatctgcatatatttgggaccacatatttcatgctctttgatatgcattgagatttgtatttgtctactacatctacaatgtatatg 23482739  T
Q  208 ac 209  Q
    ||    
T  23482738 ac 23482737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 18706739 - 18706539
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| | ||||||||||||||||| |||     
T  18706739 ccaataatataacgttgacatataattttaacaaaagaatgaagttacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 18706640  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||| ||||||||| ||| ||||| ||||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  18706639 gttcgaattccaacatctgcatatattt-ggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatg 18706541  T
Q  208 ac 209  Q
    ||    
T  18706540 ac 18706539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 212
Target Start/End: Complemental strand, 52687339 - 52687141
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttca 112  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||     
T  52687339 aatataacattgacatataattttaataaaaaaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgt-tgaggttcg 52687241  T
Q  113 aatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
     ||| |||||||||||||||||||||||||||| ||| ||||| ||| ||| ||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  52687240 gattccaacatctgcatatatttgggaccacatatttcattctctttcataggcattgagatttgtttttgtatactacatctacaatgtatatgacccg 52687141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 1231813 - 1231998
Alignment:
Q  27 atataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttcaaatttcaacatctg 126  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| ||||||||||| |||| |||| |||||||||    
T  1231813 atataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctg 1231912  T
Q  127 catatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| || ||| ||||||||||||||    
T  1231913 catatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatttacaatgtatatgacccg 1231998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 2951597 - 2951393
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  2951597 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 2951498  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||| ||||||| || || || ||| |||||||||    
T  2951497 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttttttttgtttattatatttacaatgtatatg 2951398  T
Q  208 acccg 212  Q
    |||||    
T  2951397 acccg 2951393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 13 - 193
Target Start/End: Original strand, 35614819 - 35614998
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttca 112  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || || |||||||||||||||||| ||||     
T  35614819 aatatgacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttt-aaggtaaataagtgtggtgtctgaggttcg 35614917  T
Q  113 aatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacat 193  Q
    |||| ||||||||||||||||||| |||||||| ||| ||||| ||||||||||||| | |||||||||||||||||||||    
T  35614918 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacat 35614998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 19764771 - 19764593
Alignment:
Q  18 aacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttcaaattt 117  Q
    ||||||||||| |||||||||||||| |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| ||||     
T  19764771 aacattgacatgtaattttaacaaaataatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattc 19764672  T
Q  118 caacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatcta 196  Q
     ||||| ||||||||||||||||||||| ||| ||||| ||| ||||||||||| |||||||||||| |||||||||||    
T  19764671 aaacatttgcatatatttgggaccacatatttcattctttttaatatgcattgagatttgtttttgtatactacatcta 19764593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 2590333 - 2590468
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  2590333 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 2590432  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccaca 144  Q
    |||  ||||  ||||||||||||||||||| ||||||    
T  2590433 gtt-gaattcgaacatctgcatatatttggaaccaca 2590468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 19768462 - 19768599
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||     
T  19768462 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtctgag 19768561  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacat 145  Q
    |||| || |||||||||| ||| ||||||| |||||||    
T  19768562 gttcgaaattcaacatctacatgtatttggaaccacat 19768599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 212
Target Start/End: Complemental strand, 31018353 - 31018227
Alignment:
Q  86 gtgaataagtgtggtgtctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtc 185  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||    
T  31018353 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 31018254  T
Q  186 tactacatctacgatgtatatgacccg 212  Q
    ||||| |||||| ||||||||||||||    
T  31018253 tactatatctacaatgtatatgacccg 31018227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 50326077 - 50326203
Alignment:
Q  86 gtgaataagtgtggtgtctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtc 185  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||    
T  50326077 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 50326176  T
Q  186 tactacatctacgatgtatatgacccg 212  Q
    ||||| |||||| ||||||||||||||    
T  50326177 tactatatctacaatgtatatgacccg 50326203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 5061335 - 5061419
Alignment:
Q  122 atctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatat 206  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  5061335 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 5061419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 29942159 - 29942220
Alignment:
Q  151 attctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  29942159 attctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 29942220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 46928413 - 46928359
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaacc 293  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  46928413 ttatgaattaaaaatgtctttttatgtaattttacatctatcagttaattgaacc 46928359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 15349547 - 15349601
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaacc 293  Q
    ||||||||||||||| || |||||| ||||||||||||||||| |||||| ||||    
T  15349547 ttatgaattaaaaatgtccttttatgtaattttacatctatcagttaattgaacc 15349601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 36378508 - 36378454
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaacc 293  Q
    ||||||||||||||| || |||||| ||||||||||||||||| |||||| ||||    
T  36378508 ttatgaattaaaaatgtccttttatgtaattttacatctatcagttaattgaacc 36378454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 49184614 - 49184560
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaacc 293  Q
    ||||||||||||||| || |||||| |||||||||||||||||| ||||| ||||    
T  49184614 ttatgaattaaaaatgtccttttatgtaattttacatctatcaactaattgaacc 49184560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 1231725 - 1231766
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  1231725 aatataacattaacatataatttttacaaaagaatgaagtaa 1231766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 2951679 - 2951638
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  2951679 aatataacattaacatataatttttacaaaagaatgaagtaa 2951638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 4266297 - 4266338
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  4266297 aatataacattaacatataatttttacaaaagaatgaagtaa 4266338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 18706816 - 18706775
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  18706816 aatataacattaacatataatttttacaaaagaatgaagtaa 18706775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 19764857 - 19764816
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  19764857 aatataacattaacatataatttttacaaaagaatgaagtaa 19764816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 19768382 - 19768423
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  19768382 aatataacattaacatataatttttacaaaagaatgaagtaa 19768423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 23483015 - 23482974
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  23483015 aatataacattaacatataatttttacaaaagaatgaagtaa 23482974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 35614734 - 35614775
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  35614734 aatataacattaacatataatttttacaaaagaatgaagtaa 35614775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 38914060 - 38914019
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  38914060 aatataacattaacatataatttttacaaaagaatgaagtaa 38914019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 52036353 - 52036312
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  52036353 aatataacattaacatataatttttacaaaagaatgaagtaa 52036312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 7333863 - 7333903
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagta 53  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  7333863 aatataacattaacatataatttttacaaaagaatgaagta 7333903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 28429711 - 28429753
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    |||||||||||||||||| |||||| ||||||||| |||||||    
T  28429711 ttatgaattaaaaatatcattttatgtaattttacttctatca 28429753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 30494631 - 30494577
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaacc 293  Q
    |||||||||||||||||  |||||| ||||||||||||||| |  ||||||||||    
T  30494631 ttatgaattaaaaatattcttttatgtaattttacatctattagctaattaaacc 30494577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 37671643 - 37671582
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaaccactgattt 301  Q
    ||||||||||||||| || |||||| ||||||||||||||| | |||||| ||||||| ||||    
T  37671643 ttatgaattaaaaatgtccttttatgtaattttacatctat-agttaattgaaccactaattt 37671582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 52687424 - 52687386
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaag 51  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  52687424 aatataacattaacatataatttttacaaaagaatgaag 52687386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 35613984 - 35614025
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  35613984 aatataaaattaacatataatttttacaaaagaatgaagtaa 35614025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 38444549 - 38444586
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaa 50  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  38444549 aatataacattaacatataatttttacaaaagaatgaa 38444586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 6814751 - 6814787
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacat 275  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  6814751 ttatgaattaaaaatgtctttttatgtaattttacat 6814787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 37704506 - 37704546
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctat 279  Q
    ||||||||||||||| || |||||| |||||||||||||||    
T  37704506 ttatgaattaaaaatgtccttttatgtaattttacatctat 37704546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 161; Significance: 9e-86; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 2005426 - 2005630
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  2005426 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 2005525  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  2005526 gttcgaattccaacatctgcatatatttaagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactgcatctacaatgtatatg 2005625  T
Q  208 acccg 212  Q
    |||||    
T  2005626 acccg 2005630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 13 - 210
Target Start/End: Original strand, 15044725 - 15044922
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttca 112  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||     
T  15044725 aatataacattgacatataattttaacaaaagaatgaagtaaaacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 15044824  T
Q  113 aatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacc 210  Q
    |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||| |||||||||||||||||||| ||||||||||||    
T  15044825 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgaaatttatttttgtctactacatctacaatgtatatgacc 15044922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 10584959 - 10584756
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||     
T  10584959 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgag 10584860  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  10584859 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatg 10584760  T
Q  208 accc 211  Q
    ||||    
T  10584759 accc 10584756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 14 - 212
Target Start/End: Original strand, 13533771 - 13533969
Alignment:
Q  14 atataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttcaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |    
T  13533771 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 13533870  T
Q  114 atttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
    ||| |||||||||||||||||||||||||||| ||| ||||| |||||||| |||||| |||||||||| |||||||||||||| ||||||||||||||    
T  13533871 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccg 13533969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 17202430 - 17202631
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  17202430 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 17202529  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||  |||||| |||||||||||||||||| |||||||||    
T  17202530 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgtgatttgtatttgtctactacatctacaatgtatatg 17202629  T
Q  208 ac 209  Q
    ||    
T  17202630 ac 17202631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 3592891 - 3593095
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||     
T  3592891 ccaataatataacattgagatataattttaacaaaagaatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgag 3592990  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||||| |||||||||||| ||||| ||| ||||| || |||||||||||| ||||||||||||||||||||||||| |||||||||    
T  3592991 gttcgaattccaacatctgaatatatttgggatcacatatttcattctcttggatatgcattgagatttgtttttgtctactacatctacaatgtatatg 3593090  T
Q  208 acccg 212  Q
    |||||    
T  3593091 acccg 3593095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 12597496 - 12597292
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  12597496 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 12597397  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  12597396 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 12597297  T
Q  208 acccg 212  Q
    |||||    
T  12597296 acccg 12597292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 19997663 - 19997867
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  19997663 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 19997762  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  19997763 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 19997862  T
Q  208 acccg 212  Q
    |||||    
T  19997863 acccg 19997867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 33645940 - 33646144
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  33645940 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33646039  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||| ||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  33646040 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 33646139  T
Q  208 acccg 212  Q
    |||||    
T  33646140 acccg 33646144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 28099828 - 28099624
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  28099828 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 28099729  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| ||||||| |||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||| || |||||| |||||||||    
T  28099728 gttcgaattccaacatcagcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 28099629  T
Q  208 acccg 212  Q
    |||||    
T  28099628 acccg 28099624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 2266766 - 2266978
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtgg-------- 99  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| ||||            
T  2266766 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtcgtgg 2266865  T
Q  100 tgtctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacga 199  Q
    ||||||| |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |    
T  2266866 tgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 2266965  T
Q  200 tgtatatgacccg 212  Q
    |||||||||||||    
T  2266966 tgtatatgacccg 2266978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 17594814 - 17594978
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaatt-aatatttttaaagtgaataagtgtggtgtctga 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  17594814 ccaataatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaatttaatatttttaaggtgaataagtgtggtgtctga 17594913  T
Q  107 agttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattga 171  Q
    ||||  ||||||||||||| ||||||||||||||||||| ||| ||| | |||||||||||||||    
T  17594914 agtttgaatttcaacatctccatatatttgggaccacatatttcattttctttgatatgcattga 17594978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 8539598 - 8539726
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  8539598 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 8539697  T
Q  108 gttcaaatttcaacatctgcatatatttg 136  Q
    |||| |||| |||||||||||||||||||    
T  8539698 gttcgaattccaacatctgcatatatttg 8539726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 25448747 - 25448876
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||   ||||||||| |||||||||||     
T  25448747 ccaataatataatattgacatataattttaacaaaaaaatgaagtaacacacgattgataaaaattaatatatttttggtgaataagcgtggtgtctgag 25448846  T
Q  108 gttcaaatttcaacatctgcatatatttgg 137  Q
     ||| |||| |||||||| |||||||||||    
T  25448847 tttcgaattccaacatctacatatatttgg 25448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 100 - 203
Target Start/End: Original strand, 33035523 - 33035626
Alignment:
Q  100 tgtctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacga 199  Q
    |||||||  ||| |||| || |||||||||||||||| |||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| |    
T  33035523 tgtctgagattcgaattccagcatctgcatatatttgagaccacatgttttattctctttgacatgcattgagatttgtttttgtctactacatctacaa 33035622  T
Q  200 tgta 203  Q
    ||||    
T  33035623 tgta 33035626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 118 - 212
Target Start/End: Complemental strand, 1405684 - 1405590
Alignment:
Q  118 caacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
    |||||||||||||||||||||| ||||| ||| ||||| ||| |||| |||||| |||||||||| |||||||||||||| ||||||||||||||    
T  1405684 caacatctgcatatatttgggatcacatatttcattctctttaatatacattgagatttgtttttatctactacatctacaatgtatatgacccg 1405590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 1225977 - 1226019
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  1225977 ttatgaattaaaaatgtccttttatataattttacatctatca 1226019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 2266684 - 2266725
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  2266684 aatataacattaacatataatttttacaaaagaatgaagtaa 2266725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 10585039 - 10584998
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  10585039 aatataacattaacatataatttttacaaaagaatgaagtaa 10584998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 12597578 - 12597537
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  12597578 aatataacattaacatataatttttacaaaagaatgaagtaa 12597537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 15044639 - 15044680
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  15044639 aatataacattaacatataatttttacaaaagaatgaagtaa 15044680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 17202348 - 17202389
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  17202348 aatataacattaacatataatttttacaaaagaatgaagtaa 17202389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 17594733 - 17594774
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  17594733 aatataacattaacatataatttttacaaaagaatgaagtaa 17594774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 19997580 - 19997621
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  19997580 aatataacattaacatataatttttacaaaagaatgaagtaa 19997621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 28099911 - 28099870
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  28099911 aatataacattaacatataatttttacaaaagaatgaagtaa 28099870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 33645858 - 33645899
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  33645858 aatataacattaacatataatttttacaaaagaatgaagtaa 33645899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 29413489 - 29413449
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctat 279  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  29413489 ttatgaattaaaaatatcattttatgtaattttacatctat 29413449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 3636388 - 3636346
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  3636388 ttatgaattaaaaatgtccttttatgtaattttacatctatca 3636346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 29822473 - 29822431
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  29822473 ttatgaattaaaaatgtccttttatgtaattttacatctatca 29822431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 2005348 - 2005389
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  2005348 aatataacattaacatataatttttacaaaataatgaagtaa 2005389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 3589064 - 3589105
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||| ||||||||    
T  3589064 aatataacattaacatataatttttacaaaagagtgaagtaa 3589105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 3592087 - 3592124
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaa 50  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  3592087 aatataacattaacatataatttttacaaaagaatgaa 3592124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 3592812 - 3592853
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    |||| |||||| |||||||||||| |||||||||||||||||    
T  3592812 aatacaacattaacatataatttttacaaaagaatgaagtaa 3592853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 25448665 - 25448706
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||| ||||||    
T  25448665 aatataacattaacatataatttttacaaaagaataaagtaa 25448706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 8539723 - 8539755
Alignment:
Q  180 tttgtctactacatctacgatgtatatgacccg 212  Q
    |||||||||||||||||| ||||||||||||||    
T  8539723 tttgtctactacatctacaatgtatatgacccg 8539755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 19345 - 19577
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  19345 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 19444  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||| | ||| ||||||||||| ||||||||||||||||||||||||| ||||||| |    
T  19445 gttcgaattccaacatctgcatatatttgggaccacatatttaattatctttaatatgcattgagatttgtttttgtctactacatctacaatgtatagg 19544  T
Q  208 acccgcacaggtacacaggtggaaagtctagtt 240  Q
    ||||| || |   ||| ||||||||||||||||    
T  19545 acccgtacggcagcacgggtggaaagtctagtt 19577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 999462 - 999262
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  999462 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 999363  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||| | |||||||    
T  999362 gttcgaattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactacatctacaaagtatatg 999263  T
Q  208 a 208  Q
    |    
T  999262 a 999262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 36279685 - 36279484
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||     
T  36279685 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtatctgag 36279586  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
     ||| |||| |||||||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  36279585 attcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgatatttgtttttgtctactacatctacaatgtatatg 36279486  T
Q  208 ac 209  Q
    ||    
T  36279485 ac 36279484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 8700259 - 8700463
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||| |||     
T  8700259 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaaaaaatgtggtgtatgag 8700358  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  8700359 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatatg 8700458  T
Q  208 acccg 212  Q
    |||||    
T  8700459 acccg 8700463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 31424007 - 31424208
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||| |||     
T  31424007 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtatgag 31424106  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  31424107 gttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 31424206  T
Q  208 ac 209  Q
    ||    
T  31424207 ac 31424208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 19596594 - 19596390
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| |||||||||||     
T  19596594 ccaataatttaacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgag 19596495  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  19596494 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatg 19596395  T
Q  208 acccg 212  Q
    |||||    
T  19596394 acccg 19596390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 26231490 - 26231292
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||     
T  26231490 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtctgag 26231391  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatat 206  Q
    |||| |||| ||||||||| ||||||||| |||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  26231390 gttcgaattccaacatctgaatatatttgagaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatat 26231292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 41664508 - 41664712
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  41664508 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 41664607  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  41664608 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41664707  T
Q  208 acccg 212  Q
    |||||    
T  41664708 acccg 41664712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 41663235 - 41663438
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  41663235 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 41663334  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  41663335 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41663434  T
Q  208 accc 211  Q
    ||||    
T  41663435 accc 41663438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 18351549 - 18351782
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| ||||||| |||     
T  18351549 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgag 18351648  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  18351649 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18351748  T
Q  208 acccgcacaggtacacaggtggaaagtctagtta 241  Q
    |||||  | |   ||| |||||||||||||||||    
T  18351749 acccgtgcggcagcacgggtggaaagtctagtta 18351782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 42055197 - 42055399
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||||||||||||  || |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  42055197 ccaataatataacattgacata--atcttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 42055294  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||| ||| | ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  42055295 gttcgaattccaacatctgcatatatttgggatcacctatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 42055394  T
Q  208 acccg 212  Q
    |||||    
T  42055395 acccg 42055399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 6120550 - 6120754
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  6120550 ccaataatataatattgacatatagttttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 6120649  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  6120650 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 6120749  T
Q  208 acccg 212  Q
    |||||    
T  6120750 acccg 6120754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 13 - 212
Target Start/End: Complemental strand, 34007935 - 34007736
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttca 112  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||| ||||     
T  34007935 aatataacattgacatataattttaacaaaagaatgaagtaacacacgatttataaaaattaatatttttaaggtggataagtgtggtgtctgaggttcg 34007836  T
Q  113 aatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
    |||| ||||||| ||||||||||||||| |||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||| ||| |||| |||||    
T  34007835 aattccaacatcggcatatatttgggactacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatggatattacccg 34007736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 44902080 - 44902283
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||   ||||||||| |||||||||||     
T  44902080 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatta-tattttttttgtgaataagcgtggtgtctgag 44902178  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  44902179 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 44902278  T
Q  208 acccg 212  Q
    |||||    
T  44902279 acccg 44902283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 13 - 212
Target Start/End: Original strand, 20544828 - 20545027
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaagttca 112  Q
    ||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||   ||||||||| ||||||| | | ||||     
T  20544828 aatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgttttaggttcg 20544927  T
Q  113 aatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
    ||||  ||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||| | |||||| ||||||||||||||    
T  20544928 aattctaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctaccatatctacaatgtatatgacccg 20545027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 42441958 - 42442193
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  42441958 ccaataatataatattgacatataattttaacaaaagaatgaagtaa--cacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 42442055  T
Q  108 gttcaaattt------caacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatg 201  Q
    |||| ||||       |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||    
T  42442056 gttcgaattcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatg 42442155  T
Q  202 tatatgacccgcacaggtacacaggtggaaagtctagt 239  Q
    |||||||||||  | |  |||| |||||||||||||||    
T  42442156 tatatgacccgtgcggcaacacgggtggaaagtctagt 42442193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 16214822 - 16215011
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||  ||     
T  16214822 ccaataatgtaacactgacatataattttaacaaaagaatgaagtaacacacgattaataaaaattaatatttttaaggtgaataagtgtggtgttagag 16214921  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctac 197  Q
    |||| |||| | |||| ||||||||||| ||||||||| ||| ||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  16214922 gttcgaattcctacatttgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctac 16215011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 73 - 212
Target Start/End: Complemental strand, 692368 - 692229
Alignment:
Q  73 taatatttttaaagtgaataagtgtggtgtctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgat 172  Q
    |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||| || ||| ||||| |||||||||||||||     
T  692368 taatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccatatatttcattctctttgatatgcattgag 692269  T
Q  173 atttgtttttgtctactacatctacgatgtatatgacccg 212  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  692268 atttgtttttgtctactacatttacaatgtatatgacccg 692229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 86 - 241
Target Start/End: Complemental strand, 27944949 - 27944794
Alignment:
Q  86 gtgaataagtgtggtgtctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtc 185  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||    
T  27944949 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 27944850  T
Q  186 tactacatctacgatgtatatgacccgcacaggtacacaggtggaaagtctagtta 241  Q
    ||||| |||||| ||||||||||||||  | |   ||| |||||||||||||||||    
T  27944849 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtta 27944794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 19596677 - 19596636
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  19596677 aatataacattaacatataattttaacaaaagaatgaagtaa 19596636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 17501915 - 17501853
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaaccactgattt 301  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||  ||||| ||||||| ||||    
T  17501915 ttatgaattaaaaatgtctttttatgtaattttacaactatcagctaattgaaccactaattt 17501853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 6120467 - 6120508
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  6120467 aatataacattaacatataatttttacaaaagaatgaagtaa 6120508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 16214741 - 16214782
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  16214741 aatataacattaacatataatttttacaaaagaatgaagtaa 16214782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 18351467 - 18351508
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  18351467 aatataacattaacatataatttttacaaaagaatgaagtaa 18351508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 26231570 - 26231529
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  26231570 aatataacattaacatataatttttacaaaagaatgaagtaa 26231529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 31423924 - 31423965
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  31423924 aatataacattaacatataatttttacaaaagaatgaagtaa 31423965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 34008023 - 34007982
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  34008023 aatataacattaacatataatttttacaaaagaatgaagtaa 34007982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 41663152 - 41663193
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  41663152 aatataacattaacatataatttttacaaaagaatgaagtaa 41663193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 42441876 - 42441917
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  42441876 aatataacattaacatataatttttacaaaagaatgaagtaa 42441917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 2046624 - 2046582
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  2046624 ttatgaattaaaaatgtccttttatgtaattttacatctatca 2046582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 8070042 - 8069988
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatcaattaattaaacc 293  Q
    |||||||||||||||||| ||||||  ||||||||||| ||||| ||||| ||||    
T  8070042 ttatgaattaaaaatatccttttatgaaattttacatccatcaactaattgaacc 8069988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 999543 - 999502
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  999543 aatataacattaacatataatttttacaaaataatgaagtaa 999502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 7570440 - 7570481
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatc 280  Q
    ||||||||||||||| | ||||||| ||||||||||||||||    
T  7570440 ttatgaattaaaaatgtatttttatgtaattttacatctatc 7570481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 36279766 - 36279729
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaa 50  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  36279766 aatataacattaacatataatttttacaaaagaatgaa 36279729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 41664426 - 41664467
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| | |||||||||||||||    
T  41664426 aatataacattaacatataatttttataaaagaatgaagtaa 41664467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 44901998 - 44902035
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaa 50  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  44901998 aatataacattaacatataatttttacaaaagaatgaa 44902035  T

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Target: scaffold0031 (Bit Score: 141; Significance: 7e-74; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 46272 - 46476
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||||||     
T  46272 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 46371  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  46372 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 46471  T
Q  208 acccg 212  Q
    |||||    
T  46472 acccg 46476  T

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Target: scaffold0022 (Bit Score: 141; Significance: 7e-74; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 149281 - 149077
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaagtgaataagtgtggtgtctgaa 107  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||| |||     
T  149281 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgttgtgtttgat 149182  T
Q  108 gttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtctactacatctacgatgtatatg 207  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||| |||||| || ||||||    
T  149181 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatttatatg 149082  T
Q  208 acccg 212  Q
    |||||    
T  149081 acccg 149077  T

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Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 149361 - 149320
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  149361 aatataacattaacatataatttttacaaaagaatgaagtaa 149320  T

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Target: scaffold0515 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 6232 - 6088
Alignment:
Q  68 aaaattaatatttttaaagtgaataagtgtggtgtctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgca 167  Q
    |||||||||||||||||  |||||||||||||||| ||| |||| |||| ||||||||||||||||||| |||||||| ||| ||||| |||||||||||    
T  6232 aaaattaatatttttaagatgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgca 6133  T
Q  168 ttgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
    |||| || ||||||||||||| |||||||| ||||||||||||||    
T  6132 ttgagatatgtttttgtctacaacatctacaatgtatatgacccg 6088  T

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Target: scaffold0306 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 6242 - 6098
Alignment:
Q  68 aaaattaatatttttaaagtgaataagtgtggtgtctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgca 167  Q
    |||||||||||||||||  |||||||||||||||| ||| |||| |||| ||||||||||||||||||| |||||||| ||| ||||| |||||||||||    
T  6242 aaaattaatatttttaagatgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgca 6143  T
Q  168 ttgatatttgtttttgtctactacatctacgatgtatatgacccg 212  Q
    |||| || ||||||||||||| |||||||| ||||||||||||||    
T  6142 ttgagatatgtttttgtctacaacatctacaatgtatatgacccg 6098  T

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Target: scaffold0836 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 87 - 212
Target Start/End: Complemental strand, 5430 - 5305
Alignment:
Q  87 tgaataagtgtggtgtctgaagttcaaatttcaacatctgcatatatttgggaccacatgttttattctatttgatatgcattgatatttgtttttgtct 186  Q
    |||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||    
T  5430 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 5331  T
Q  187 actacatctacgatgtatatgacccg 212  Q
    | || |||||| ||||||||| ||||    
T  5330 attatatctacaatgtatatgtcccg 5305  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 64582 - 64624
Alignment:
Q  239 ttatgaattaaaaatatctttttatataattttacatctatca 281  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  64582 ttatgaattaaaaatgtccttttatgtaattttacatctatca 64624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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